Prupe.7G161400_v2.0.a1

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000165
Physical Location & Seq
Forward (+)
16744399 .. 16749006
4608 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G161400.1

Sequence Viewer

Length: 2037 bp
ATGGATAGTGATTTTCAAAGCAAATCATTAGAAAAAAGTGACAAGGAAGCATTATTTGGAGAAAGTGATGAACTAAGAGTAGGGATGGAAGTTAGTGATGAATCTGAAGCTTACCAGCTCTGCAACACATATGCCTTTAACAAAGGTTTTAGTATTCGCAAGGGGCATCTTCGAAGAGATTCGCAAAATAATGTCCGGCAACGAGAATTTTTGTGCTCAAAGGAAGGATTTCAAGTAGATGAAGACTTATGTGAAGCGAAGAAAGTGAGAAGGTTAGATACAAGAACAGGTTGCAAGGCTGTAATTCGATTCACCGTGGAAAATGGTATGTGGAAGCTCTCCTACATCAATCCAGTTCATAATCACGAGTTTGCTAAGCCTGAAGAGCGACAATTTCTAAGATCAGGTCGAAATATACCAAGTGTTCGTGCAAATATCCTTGGCTCTAAGAGTGATGGGAGTATAAGAACAGCAAAATCACATTCATACTTGGGAAAAGAGTTTGGCTGTGATGAGAATGATAGATCTACTAATAAAGATTTACCTAATTGTTTGCAAAGGAGTAAGGATGAAATGATAGAACAGAATGGACAAAGCTTGATAAATTATTTTAAGCATAAACAGATGGAGGATCCAAATTTTTTCTACAGTGTTCAAGTGGACCAATTTAGTCGAATCACAAATTATTTCTGGAGAGATGGTAGATCAAAGTTGGATTATGATTGCTTTGGAGACGTTGTATGTTTTGAAACTACATTTCGAACCAACAGCAATCTAGTTTGTAGTCCATTTTTGGGAGTCAATCACCATTGGAAGAATATCTCATTTGGTTGTGCTTTTTTATTGGACGAGAGTGCTGATTCATTTGTTTGGTTGTTTGAAACATTTTTGGAGTCGATGGGAAATAAACAGCCAAAAACCATTTTCACGGATGAGGATAAAGCAATGGAAAAGGCAAAGGCAATTGAGACTGTGTTCCCAGAGACACGGCATCGGTTATGCAATTGGCAGATCTCCAAGAATGCTACACAACATCTTGCTAGTCTTTGTGCTGATCCTGAATTCAAGAAGCACTTCAACAAATGCTTTCTTGATTGTTTTACTGAAGTAGAATTTCAAAATTCCTGGGATGACATGATTAAAATGTTCAACCTTGAAAGCAATTCGTGGCTGAAGATGTTGTATTCACTTCGAGAGAAATGGTGTCCTGCATTTAGCCTAGATACTTTCTCAGCAAATATTGGATCAAGCCAGAGGGGTGAGAACACAAACACTATTTTCCATCAAGTGTCTAGAAAAACAGTGGATCTCGTTAGTTTTGTACAGCATTATGAGCTAAAAACAAAAAAGATGCGATTCACAGAGTTGGAAGAGGATTTTCGTTTTAAAAATGCTATGCCTCATCTTAGAGTAAATAGTGGTATCTTTAAGCATGCAGCTACTGAGTACACTGTCAAAATGTATTCGTTCTTTGAAAATGAGCTTATGAGTATTTTTGGGGTGAGGATGGTAGAAGTTAGTAATGATGGCAATCAATATATTTATGAAGCAATTGAAGAAGGTCTTCAAAGAGTCTACATGATTCAATACAACTGTACTACGTCCATGATTTCTTGTTCATGTAAGTTATTTGAATCCATGGGGTTGTTGTGCCGTCATGCCCTAAAAGTACTGGATTTTAAAAACTATACAAGCATACCGACACAATACATAGTGAAGAGATGGACTAAAGGGGCAAAGAAAGGGATTGTGGTGAGTAATGAGTTCTGTAAGTCATCATATAGAAAGGCCAAGTCTGCCCAATCGCTGCGCCTAAGTGAGTTGATGCATGAAGGAAATAATGTTTTCAGTATAGGCTCATTGTGTGATTCAGGAACGAGGATTGTCAGACAAAAGTTAGCGGAGACCATGAAGTTACTGGAAAGTGACGAGGAAACTACCAACATGCTGGGAAGTTTGAGCAAAGTAGACGACCAATCTGTTCGTGATGTGCTTCTTGATAATGGAAGTGTGGAATCCCCCAGTTGTGATGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

679

Amino Acids

78.38

Weight (kDa)

6.5

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1575, 1968
AciI CCGC 1 cut(s) 1901
AclWI GGATC 5 cut(s) 626, 639, 1049, 1252, 1314
AcsI RAATTY 5 cut(s) 206, 637, 1061, 1112, 1120
AcuI CTGAAG 4 cut(s) 126, 402, 1125, 1193
AfaI GTAC 4 cut(s) 1323, 1448, 1597, 1671
AfiI CCNNNNNNNGG 1 cut(s) 794
AjnI CCWGG 1 cut(s) 1124
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
AluBI AGCT 7 cut(s) 110, 118, 337, 597, 1336, 1439, 1483
AluI AGCT 7 cut(s) 110, 118, 337, 597, 1336, 1439, 1483
Alw21I GWGCWC 1 cut(s) 218
Alw26I GTCTC 4 cut(s) 726, 962, 977, 1898
AlwI GGATC 5 cut(s) 626, 639, 1049, 1252, 1314
AlwNI CAGNNNCTG 1 cut(s) 1442
AoxI GGCC 1 cut(s) 1788
ApeKI GCWGC 2 cut(s) 1436, 1807
ApoI RAATTY 5 cut(s) 206, 637, 1061, 1112, 1120
Asp700I GAANNNNTTC 4 cut(s) 178, 228, 1073, 1563
AspLEI GCGC 1 cut(s) 1812
AspS9I GGNCC 1 cut(s) 661
AsuHPI GGTGA 5 cut(s) 304, 797, 1271, 1513, 1765
AsuII TTCGAA 2 cut(s) 172, 760
AvaII GGWCC 1 cut(s) 661
BamHI GGATCC 1 cut(s) 631
BarI GAAGNNNNNNTAC 4 cut(s) 262, 294, 326, 358
BauI CACGAG 1 cut(s) 365
BbsI GAAGAC 2 cut(s) 249, 1556
Bbv12I GWGCWC 1 cut(s) 218
BbvI GCAGC 2 cut(s) 1448, 1794
BceAI ACGGC 2 cut(s) 1004, 1638
BciT130I CCWGG 1 cut(s) 1126
BcoDI GTCTC 4 cut(s) 726, 962, 977, 1898
BfaI CTAG 4 cut(s) 776, 1041, 1220, 1293
BfmI CTRYAG 1 cut(s) 646
BglII AGATCT 2 cut(s) 524, 1011
BisI GCNGC 2 cut(s) 1437, 1808
BlpI GCTNAGC 1 cut(s) 375
BlsI GCNGC 2 cut(s) 1438, 1809
BmcAI AGTACT 1 cut(s) 1671
Bme1390I CCNGG 1 cut(s) 1126
Bme18I GGWCC 1 cut(s) 661
BmgT120I GGNCC 1 cut(s) 661
BmiI GGNNCC 1 cut(s) 633
BmrFI CCNGG 1 cut(s) 1126
BmrI ACTGGG 1 cut(s) 2016
BmsI GCATC 4 cut(s) 175, 1000, 1341, 1815
BmuI ACTGGG 1 cut(s) 2016
BpiI GAAGAC 2 cut(s) 249, 1556
BpmI CTGGAG 1 cut(s) 712
Bpu1102I GCTNAGC 1 cut(s) 375
Bpu14I TTCGAA 2 cut(s) 172, 760
BsaBI GATNNNNATC 1 cut(s) 1530
BsaI GGTCTC 1 cut(s) 1898
BsaJI CCNNGG 4 cut(s) 315, 439, 1125, 1638
BsaXI ACNNNNNCTCC 4 cut(s) 685, 715, 723, 753
Bsc4I CCNNNNNNNGG 1 cut(s) 794
Bse1I ACTGG 4 cut(s) 353, 1677, 1923, 2022
Bse3DI GCAATG 1 cut(s) 951
Bse8I GATNNNNATC 1 cut(s) 1530
BseBI CCWGG 1 cut(s) 1126
BseDI CCNNGG 4 cut(s) 315, 439, 1125, 1638
BseGI GGATG 5 cut(s) 90, 574, 937, 1135, 1512
BseJI GATNNNNATC 1 cut(s) 1530
BseLI CCNNNNNNNGG 1 cut(s) 794
BseMI GCAATG 1 cut(s) 951
BseMII CTCAG 2 cut(s) 1245, 1434
BseNI ACTGG 4 cut(s) 353, 1677, 1923, 2022
BseXI GCAGC 2 cut(s) 1448, 1794
BseYI CCCAGC 1 cut(s) 1948
BshFI GGCC 1 cut(s) 1790
BsiHKAI GWGCWC 1 cut(s) 218
BsiSI CCGG 1 cut(s) 196
BslI CCNNNNNNNGG 1 cut(s) 794
BsmAI GTCTC 4 cut(s) 726, 962, 977, 1898
BsmBI CGTCTC 1 cut(s) 726
BsmI GAATGC 1 cut(s) 1027
BsnI GGCC 1 cut(s) 1790
Bso31I GGTCTC 1 cut(s) 1898
Bsp119I TTCGAA 2 cut(s) 172, 760
Bsp1286I GDGCHC 1 cut(s) 218
Bsp1407I TGTACA 1 cut(s) 1321
Bsp143I GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
Bsp1720I GCTNAGC 1 cut(s) 375
Bsp19I CCATGG 1 cut(s) 1638
BspACI CCGC 1 cut(s) 1901
BspANI GGCC 1 cut(s) 1790
BspCNI CTCAG 2 cut(s) 1244, 1435
BspLI GGNNCC 1 cut(s) 633
BspPI GGATC 5 cut(s) 626, 639, 1049, 1252, 1314
BspQI GCTCTTC 1 cut(s) 378
BspT104I TTCGAA 2 cut(s) 172, 760
BspTNI GGTCTC 1 cut(s) 1898
BsrDI GCAATG 1 cut(s) 951
BsrGI TGTACA 1 cut(s) 1321
BsrI ACTGG 4 cut(s) 353, 1677, 1923, 2022
BssECI CCNNGG 4 cut(s) 315, 439, 1125, 1638
BssMI GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
BssSI CACGAG 1 cut(s) 365
BssT1I CCWWGG 2 cut(s) 439, 1638
Bst2BI CACGAG 1 cut(s) 365
Bst2UI CCWGG 1 cut(s) 1126
Bst4CI ACNGT 6 cut(s) 316, 650, 973, 1303, 1453, 1595
Bst6I CTCTTC 4 cut(s) 169, 378, 1365, 1712
BstAUI TGTACA 1 cut(s) 1321
BstBI TTCGAA 2 cut(s) 172, 760
BstC8I GCNNGC 1 cut(s) 1434
BstDEI CTNAG 8 cut(s) 74, 375, 398, 447, 1231, 1406, 1443, 1814
BstDSI CCRYGG 2 cut(s) 315, 1638
BstF5I GGATG 5 cut(s) 90, 574, 937, 1135, 1512
BstHHI GCGC 1 cut(s) 1812
BstKTI GATC 8 cut(s) 404, 527, 634, 707, 1014, 1057, 1247, 1309
BstMAI GTCTC 4 cut(s) 726, 962, 977, 1898
BstMBI GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
BstMWI GCNNNNNNNGC 3 cut(s) 385, 1333, 1796
BstNI CCWGG 1 cut(s) 1126
BstNSI RCATGY 2 cut(s) 1436, 1948
BstSCI CCNGG 1 cut(s) 1124
BstSFI CTRYAG 1 cut(s) 646
BstV1I GCAGC 2 cut(s) 1448, 1794
BstV2I GAAGAC 2 cut(s) 249, 1556
BstX2I RGATCY 4 cut(s) 524, 631, 1011, 1306
BstXI CCANNNNNNTGG 1 cut(s) 1948
BstYI RGATCY 4 cut(s) 524, 631, 1011, 1306
BsuRI GGCC 1 cut(s) 1790
BtgI CCRYGG 2 cut(s) 315, 1638
BtsCI GGATG 5 cut(s) 90, 574, 937, 1135, 1512
BtsIMutI CAGTG 3 cut(s) 655, 1308, 1449
Cac8I GCNNGC 1 cut(s) 1434
CaiI CAGNNNCTG 1 cut(s) 1442
CfoI GCGC 1 cut(s) 1812
Cfr13I GGNCC 1 cut(s) 661
Csp6I GTAC 4 cut(s) 1322, 1447, 1596, 1670
CviQI GTAC 4 cut(s) 1322, 1447, 1596, 1670
DdeI CTNAG 8 cut(s) 74, 375, 398, 447, 1231, 1406, 1443, 1814
DpnI GATC 8 cut(s) 403, 526, 633, 706, 1013, 1056, 1246, 1308
DpnII GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
DraI TTTAAA 2 cut(s) 1387, 1681
Eam1104I CTCTTC 4 cut(s) 169, 378, 1365, 1712
EarI CTCTTC 4 cut(s) 169, 378, 1365, 1712
Eco130I CCWWGG 2 cut(s) 439, 1638
Eco31I GGTCTC 1 cut(s) 1898
Eco47I GGWCC 1 cut(s) 661
Eco57I CTGAAG 4 cut(s) 126, 402, 1125, 1193
EcoRI GAATTC 1 cut(s) 1061
EcoRII CCWGG 1 cut(s) 1124
EcoT14I CCWWGG 2 cut(s) 439, 1638
EcoT22I ATGCAT 1 cut(s) 1830
ErhI CCWWGG 2 cut(s) 439, 1638
Esp3I CGTCTC 1 cut(s) 726
FalI AAGNNNNNCTT 4 cut(s) 1058, 1090, 1548, 1580
FauNDI CATATG 1 cut(s) 130
FblI GTMKAC 2 cut(s) 1575, 1968
Fnu4HI GCNGC 2 cut(s) 1437, 1808
FokI GGATG 5 cut(s) 97, 581, 944, 1142, 1519
Fsp4HI GCNGC 2 cut(s) 1437, 1808
FspBI CTAG 4 cut(s) 776, 1041, 1220, 1293
GlaI GCGC 1 cut(s) 1811
GluI GCNGC 2 cut(s) 1437, 1808
GsaI CCCAGC 1 cut(s) 1952
GsuI CTGGAG 1 cut(s) 712
HaeIII GGCC 1 cut(s) 1790
HapII CCGG 1 cut(s) 196
HhaI GCGC 1 cut(s) 1812
Hin6I GCGC 1 cut(s) 1810
HinP1I GCGC 1 cut(s) 1810
HindIII AAGCTT 2 cut(s) 108, 595
HpaII CCGG 1 cut(s) 196
HphI GGTGA 5 cut(s) 304, 797, 1271, 1513, 1765
Hpy166II GTNNAC 4 cut(s) 661, 1449, 1576, 1969
Hpy188I TCNGA 2 cut(s) 106, 1889
Hpy8I GTNNAC 4 cut(s) 661, 1449, 1576, 1969
HpyAV CCTTC 4 cut(s) 218, 264, 1553, 1826
HpyCH4III ACNGT 6 cut(s) 316, 650, 973, 1303, 1453, 1595
HpyCH4IV ACGT 2 cut(s) 735, 1601
HpyCH4V TGCA 8 cut(s) 123, 294, 431, 556, 1002, 1211, 1436, 1828
HpyF10VI GCNNNNNNNGC 3 cut(s) 385, 1333, 1796
HpyF3I CTNAG 8 cut(s) 74, 375, 398, 447, 1231, 1406, 1443, 1814
HpySE526I ACGT 2 cut(s) 735, 1601
HspAI GCGC 1 cut(s) 1810
Kzo9I GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
LguI GCTCTTC 1 cut(s) 378
Lsp1109I GCAGC 2 cut(s) 1448, 1794
LweI GCATC 4 cut(s) 175, 1000, 1341, 1815
MaeI CTAG 4 cut(s) 776, 1041, 1220, 1293
MaeII ACGT 2 cut(s) 735, 1601
MaeIII GTNAC 3 cut(s) 38, 1914, 1925
MalI GATC 8 cut(s) 403, 526, 633, 706, 1013, 1056, 1246, 1308
MboI GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
MfeI CAATTG 3 cut(s) 963, 1003, 1551
MflI RGATCY 4 cut(s) 524, 631, 1011, 1306
MhlI GDGCHC 1 cut(s) 218
MlyI GAGTC 3 cut(s) 807, 902, 1581
MmeI TCCRAC 2 cut(s) 693, 1347
MnlI CCTC 8 cut(s) 622, 928, 1248, 1366, 1410, 1497, 1872, 1924
Mph1103I ATGCAT 1 cut(s) 1830
MroXI GAANNNNTTC 4 cut(s) 178, 228, 1073, 1563
MseI TTAA 6 cut(s) 138, 612, 1140, 1386, 1428, 1680
MspI CCGG 1 cut(s) 196
MspR9I CCNGG 1 cut(s) 1126
MunI CAATTG 3 cut(s) 963, 1003, 1551
Mva1269I GAATGC 1 cut(s) 1027
MvaI CCWGG 1 cut(s) 1126
MwoI GCNNNNNNNGC 3 cut(s) 385, 1333, 1796
NcoI CCATGG 1 cut(s) 1638
NdeI CATATG 1 cut(s) 130
NdeII GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
NlaIV GGNNCC 1 cut(s) 633
NmuCI GTSAC 2 cut(s) 38, 1925
NsiI ATGCAT 1 cut(s) 1830
NspI RCATGY 2 cut(s) 1436, 1948
NspV TTCGAA 2 cut(s) 172, 760
PaeI GCATGC 1 cut(s) 1436
PciSI GCTCTTC 1 cut(s) 378
PctI GAATGC 1 cut(s) 1027
PdmI GAANNNNTTC 4 cut(s) 178, 228, 1073, 1563
PkrI GCNGC 2 cut(s) 1438, 1809
PleI GAGTC 3 cut(s) 806, 901, 1580
PpsI GAGTC 3 cut(s) 806, 901, 1580
Psp6I CCWGG 1 cut(s) 1124
PspFI CCCAGC 1 cut(s) 1948
PspGI CCWGG 1 cut(s) 1124
PspN4I GGNNCC 1 cut(s) 633
PspPI GGNCC 1 cut(s) 661
PstNI CAGNNNCTG 1 cut(s) 1442
PsuI RGATCY 4 cut(s) 524, 631, 1011, 1306
RsaI GTAC 4 cut(s) 1323, 1448, 1597, 1671
RsaNI GTAC 4 cut(s) 1322, 1447, 1596, 1670
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 6 cut(s) 138, 612, 1140, 1386, 1428, 1680
SatI GCNGC 2 cut(s) 1437, 1808
Sau3AI GATC 8 cut(s) 401, 524, 631, 704, 1011, 1054, 1244, 1306
Sau96I GGNCC 1 cut(s) 661
ScaI AGTACT 1 cut(s) 1671
SchI GAGTC 3 cut(s) 807, 902, 1581
ScrFI CCNGG 1 cut(s) 1126
SduI GDGCHC 1 cut(s) 218
SfaNI GCATC 4 cut(s) 175, 1000, 1341, 1815
SfcI CTRYAG 1 cut(s) 646
SfuI TTCGAA 2 cut(s) 172, 760
SinI GGWCC 1 cut(s) 661
SphI GCATGC 1 cut(s) 1436
SsiI CCGC 1 cut(s) 1901
SspI AATATT 1 cut(s) 1240
SspMI CTAG 4 cut(s) 776, 1041, 1220, 1293
StyD4I CCNGG 1 cut(s) 1124
StyI CCWWGG 2 cut(s) 439, 1638
TaaI ACNGT 6 cut(s) 316, 650, 973, 1303, 1453, 1595
TaiI ACGT 2 cut(s) 738, 1604
TaqI TCGA 7 cut(s) 172, 307, 409, 673, 760, 896, 1192
TatI WGTACW 4 cut(s) 1321, 1446, 1595, 1669
Tru1I TTAA 6 cut(s) 138, 612, 1140, 1386, 1428, 1680
Tru9I TTAA 6 cut(s) 138, 612, 1140, 1386, 1428, 1680
TscAI CASTG 3 cut(s) 655, 1308, 1456
TseFI GTSAC 2 cut(s) 38, 1925
TseI GCWGC 2 cut(s) 1436, 1807
Tsp45I GTSAC 2 cut(s) 38, 1925
TspGWI ACGGA 1 cut(s) 944
TspRI CASTG 3 cut(s) 655, 1308, 1456
VpaK11BI GGWCC 1 cut(s) 661
XapI RAATTY 5 cut(s) 206, 637, 1061, 1112, 1120
XbaI TCTAGA 1 cut(s) 1292
XceI RCATGY 2 cut(s) 1436, 1948
XcmI CCANNNNNNNNNTGG 1 cut(s) 1915
XmiI GTMKAC 2 cut(s) 1575, 1968
XmnI GAANNNNTTC 4 cut(s) 178, 228, 1073, 1563
XspI CTAG 4 cut(s) 776, 1041, 1220, 1293
ZrmI AGTACT 1 cut(s) 1671
Zsp2I ATGCAT 1 cut(s) 1830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.