Rmu_sc0012557.1_g000002

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012557.1
OG0000165
Physical Location & Seq
Reverse (-)
3744 .. 13216
9473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012557.1_g000002.1.cds

Sequence Viewer

Length: 2880 bp
atgagatcgaagcttttctccggttgctgcgaagagctcctcgaagctgaagacgaccgctatgttgatgcagggtctattcgtcgggctcctcaagcttttctcctttgtggttcaccgagaatggaggaaactattggagacgaagaagaactcaaagtgagaatgcaagtacactctgatgatgagtcttacaatttatataacacctatgctttgaggaagggtttcagtgtttgtaaaggacatattcgaagagatgcatcaaataaaatccgccaacgagattttctgtgttcaaatgaggggtttacaagagacgaggatgtatgtcaaccaaacaaacacagaaagttagaaacaagagttggttgtaaggctatgatatcatttatagtgaaagatggaatatggacagtatcgcagatcaattcagatcataaccatgagcttgcaaagcccgaagaaaggcaatttttgagatcagggcgaaaagtaacaggtgcttgtggaaatatttttacttctatgtatgatgcaggcataagaccaaagaaatcatttttctacatagcaaatgaagtgggtggtccggaaaatgttgggtgcactaagaaggaagtctataactacttgcaaaggaaaaagaatgaaatgttggaagcaggtgacgcacagagtttgttgaatcactttaagcacaaacaaggtgaggatcctaactttttctactcaatgcaattggaccaatatagccgaatgacgaatttcttttggagggatagcagagcaaagcttgattatgattgttttagggatgttatatgctttgacacaacatttcgtacgaataagtataatttgatttgtgcacctatagttggagttaatcatcattggagaaatgttttgtttggatgtgcttttttattggatgagactgcggaatcatttgtttggttgtttgagtcatttttggagtcaatgggaaacaaagcaccaaaaactattttcacagatgaagataaagcaatggcaaatgcaattgaaatagtgtttccaaatgcatgtcatcgattgtgcacttggcatattgccaagaatgccagcaagagaattggtagttatcttggaaatcttgagttcaagaaacagttcaaccattgtttacatggatgtagtactgaagttgaatttcgagtttcatgggatagcatgattactagatataatcttggagatcatacttggcttacaaagttgtattcacttagacaaaagtggtgtccagcatttaatttggatattttttcagcaaagattagatcaactcaaaggagtgaaagtacaaacaatgtgttccatggaatctctacacacacaatggagctcattaaatttgctcatcactatgagaaaaagattgaagagaatcgtttagcagagttggaagatgactaccgttgcaaaaatggtgcaccacgtccaaaagtatggagtaaaatgttaaggagtgcagccaaggtttatactaataaaatgtttcagctttttgaaacagaattctatggttgtatgggagttagactaaaagaagtttctagccgggatggagtttatatatatcaagccattgaagatggtcgtcaaagtgtgcacaagattgaatataattctacatccttgaacattaattgttcttgtaagtcatttgagtcgcttggaatcttgtgtcatcatgctttgaaggtgtttgatacgaataatgtcactactttacccactcagtatatcttgaaaagatggactaaagaagcaaagaaagggattgtggttagcaataatacatgtaaaggaacaagtgagaattcaaagtctgctagagtgttgcaccttagcgaattgatgcatgaaggaaatagtgtgtatgacatagcctcactgactggttcaggtactgaaattgtcaaggatctgttaaaagaggcaatgaagcgccttgaaaaagataaggacactatctacgtgttggaaaatttgaagaaacttggtgaccaatctgactctggcattcctagtaatgagatactagttttgaatccaccaagtgcaaagactaaaggaatgaaaaatgctagaatcaaagacaagagggagattaaccaacggaagaagagaacaaaagagcaagaaagccaagaaaacaatgatccaaaagctccaaatcatgtgtctacatctaatcatcagtttggtgcggcggccagtgacaggaatcttgtgaaagttgtccggattccggcgatctgtgaccagactccggcggccggtgaccgggctccagcggccagtgacttaatgggagagagaagtcaccctccaccttgctgtgcttcggtgacaagtggccggcgcggtctccggcgaccggcgaccggtgaccggactctggcgaacggtgaccgggttccggcgaccgcaccgcctccccttcaccggagtcatctgcagcaccgatcccaaccgcctgcattccggcttccgatccagcctcctcaccggagcctcccagactttgatctagcttctaagaccttggcgctgacgtggcgggcgaggtcgcggatcttggggggggaaggggaatcggaggacggagatggtgaatcggaatctggctggggagaacgagttggtgaagaggaagaagcagtgagttggagtaggaggaaggcgaggaagaagaagcggaggtcgcagactcagagatcgccgacgacagtggccggtgggtccgattcgaattccgacgagggctttccagaagcaaggggaggagagaggttgatgggagtcgagagagagagagagagagtatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

959

Amino Acids

109.06

Weight (kDa)

8.9

Isoelectric Point (pI)

49.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 656
AccI GTMKAC 1 cut(s) 2234
AccII CGCG 2 cut(s) 2415, 2623
AccIII TCCGGA 2 cut(s) 592, 2292
AclWI GGATC 7 cut(s) 710, 723, 1980, 2204, 2511, 2539, 2633
AcoI YGGCCR 5 cut(s) 2262, 2325, 2346, 2407, 2784
AcsI RAATTY 7 cut(s) 766, 1193, 1397, 1562, 1867, 2035, 2803
AcuI CTGAAG 2 cut(s) 69, 1206
AdeI CACNNNGTG 1 cut(s) 2108
AfaI GTAC 5 cut(s) 174, 847, 1183, 1348, 1957
AflIII ACRYGT 2 cut(s) 1847, 2025
AgeI ACCGGT 1 cut(s) 2435
AhlI ACTAGT 1 cut(s) 2089
AjiI CACGTC 2 cut(s) 1484, 2607
AjuI GAANNNNNNNTTGG 6 cut(s) 273, 305, 351, 383, 641, 673
Alw21I GWGCWC 7 cut(s) 39, 611, 874, 1085, 1392, 1480, 1659
Alw26I GTCTC 4 cut(s) 135, 312, 932, 2423
Alw44I GTGCAC 5 cut(s) 607, 870, 1081, 1476, 1655
AlwI GGATC 7 cut(s) 710, 723, 1980, 2204, 2511, 2539, 2633
AlwNI CAGNNNCTG 1 cut(s) 1958
Aor13HI TCCGGA 2 cut(s) 592, 2292
AoxI GGCC 5 cut(s) 2262, 2325, 2346, 2407, 2784
ApaLI GTGCAC 5 cut(s) 607, 870, 1081, 1476, 1655
ApeKI GCWGC 3 cut(s) 27, 1517, 2509
ApoI RAATTY 7 cut(s) 766, 1193, 1397, 1562, 1867, 2035, 2803
ArsI GACNNNNNNTTYG 4 cut(s) 1270, 1302, 2216, 2248
AseI ATTAAT 1 cut(s) 1692
AsiGI ACCGGT 1 cut(s) 2435
Asp700I GAANNNNTTC 3 cut(s) 14, 227, 1154
AspLEI GCGC 3 cut(s) 1998, 2415, 2602
AspS9I GGNCC 3 cut(s) 590, 745, 2793
AsuC2I CCSGG 3 cut(s) 1607, 2336, 2465
AsuII TTCGAA 2 cut(s) 253, 2801
AvaII GGWCC 3 cut(s) 590, 745, 2793
BaeGI GKGCMC 5 cut(s) 611, 874, 1085, 1480, 1659
BamHI GGATCC 1 cut(s) 715
BanII GRGCYC 4 cut(s) 39, 91, 1392, 2341
BbsI GAAGAC 1 cut(s) 57
Bbv12I GWGCWC 7 cut(s) 39, 611, 874, 1085, 1392, 1480, 1659
BbvI GCAGC 3 cut(s) 14, 1529, 2521
BccI CCATC 6 cut(s) 398, 1604, 1634, 1797, 2654, 2842
BcnI CCSGG 3 cut(s) 1607, 2336, 2465
BcoDI GTCTC 4 cut(s) 135, 312, 932, 2423
BcuI ACTAGT 1 cut(s) 2089
BfaI CTAG 7 cut(s) 1224, 1602, 1881, 2076, 2090, 2136, 2582
BfmI CTRYAG 2 cut(s) 876, 2507
BfoI RGCGCY 2 cut(s) 1999, 2603
BfuAI ACCTGC 1 cut(s) 656
BisI GCNGC 7 cut(s) 28, 1518, 2259, 2262, 2325, 2346, 2510
BlsI GCNGC 7 cut(s) 29, 1519, 2260, 2263, 2326, 2347, 2511
BmcAI AGTACT 1 cut(s) 1183
Bme1390I CCNGG 3 cut(s) 1607, 2336, 2465
Bme18I GGWCC 3 cut(s) 590, 745, 2793
BmgBI CACGTC 2 cut(s) 1484, 2607
BmgT120I GGNCC 3 cut(s) 590, 745, 2793
BmiI GGNNCC 6 cut(s) 90, 717, 2340, 2469, 2564, 2794
BmrFI CCNGG 3 cut(s) 1607, 2336, 2465
BmsI GCATC 5 cut(s) 58, 250, 272, 526, 1896
BpiI GAAGAC 1 cut(s) 57
BpmI CTGGAG 1 cut(s) 2325
Bpu10I CCTNAGC 1 cut(s) 1895
Bpu14I TTCGAA 2 cut(s) 253, 2801
BpuEI CTTGAG 2 cut(s) 78, 1160
BpuMI CCSGG 3 cut(s) 1607, 2336, 2465
Bsa29I ATCGAT 1 cut(s) 1075
BsaAI YACGTR 1 cut(s) 2026
BsaI GGTCTC 1 cut(s) 2423
BsaJI CCNNGG 3 cut(s) 1363, 1521, 2595
BsaWI WCCGGW 7 cut(s) 20, 592, 2292, 2435, 2442, 2496, 2559
BsaXI ACNNNNNCTCC 4 cut(s) 1330, 1360, 2676, 2706
Bse118I RCCGGY 5 cut(s) 2327, 2409, 2428, 2435, 2786
Bse1I ACTGG 3 cut(s) 1951, 2265, 2349
Bse3DI GCAATG 2 cut(s) 1038, 1995
BseAI TCCGGA 2 cut(s) 592, 2292
BseCI ATCGAT 1 cut(s) 1075
BseDI CCNNGG 3 cut(s) 1363, 1521, 2595
BseGI GGATG 7 cut(s) 331, 823, 923, 940, 1181, 1615, 1679
BseMI GCAATG 2 cut(s) 1038, 1995
BseMII CTCAG 2 cut(s) 1799, 2777
BseNI ACTGG 3 cut(s) 1951, 2265, 2349
BseRI GAGGAG 4 cut(s) 29, 81, 2544, 2850
BseSI GKGCMC 5 cut(s) 611, 874, 1085, 1480, 1659
BseX3I CGGCCG 1 cut(s) 2325
BseXI GCAGC 3 cut(s) 14, 1529, 2521
BseYI CCCAGC 1 cut(s) 2679
BsgI GTGCAG 1 cut(s) 1536
Bsh1236I CGCG 2 cut(s) 2415, 2623
Bsh1285I CGRYCG 5 cut(s) 58, 2328, 2429, 2436, 2478
BshFI GGCC 5 cut(s) 2264, 2327, 2348, 2409, 2786
BshTI ACCGGT 1 cut(s) 2435
BshVI ATCGAT 1 cut(s) 1075
BsiEI CGRYCG 5 cut(s) 58, 2328, 2429, 2436, 2478
BsiHKAI GWGCWC 7 cut(s) 39, 611, 874, 1085, 1392, 1480, 1659
BsiWI CGTACG 1 cut(s) 845
BsmAI GTCTC 4 cut(s) 135, 312, 932, 2423
BsmBI CGTCTC 2 cut(s) 135, 312
BsmI GAATGC 4 cut(s) 171, 1108, 2070, 2531
BsnI GGCC 5 cut(s) 2264, 2327, 2348, 2409, 2786
Bso31I GGTCTC 1 cut(s) 2423
Bsp119I TTCGAA 2 cut(s) 253, 2801
Bsp1286I GDGCHC 9 cut(s) 39, 91, 611, 874, 1085, 1392, 1480, 1659, 2341
Bsp13I TCCGGA 2 cut(s) 592, 2292
Bsp19I CCATGG 1 cut(s) 1363
BspANI GGCC 5 cut(s) 2264, 2327, 2348, 2409, 2786
BspCNI CTCAG 2 cut(s) 1798, 2776
BspDI ATCGAT 1 cut(s) 1075
BspEI TCCGGA 2 cut(s) 592, 2292
BspFNI CGCG 2 cut(s) 2415, 2623
BspLI GGNNCC 6 cut(s) 90, 717, 2340, 2469, 2564, 2794
BspMAI CTGCAG 1 cut(s) 2511
BspMI ACCTGC 1 cut(s) 656
BspPI GGATC 7 cut(s) 710, 723, 1980, 2204, 2511, 2539, 2633
BspQI GCTCTTC 1 cut(s) 27
BspT104I TTCGAA 2 cut(s) 253, 2801
BspTNI GGTCTC 1 cut(s) 2423
BsrDI GCAATG 2 cut(s) 1038, 1995
BsrFI RCCGGY 5 cut(s) 2327, 2409, 2428, 2435, 2786
BsrI ACTGG 3 cut(s) 1951, 2265, 2349
BssAI RCCGGY 5 cut(s) 2327, 2409, 2428, 2435, 2786
BssECI CCNNGG 3 cut(s) 1363, 1521, 2595
BssT1I CCWWGG 3 cut(s) 1363, 1521, 2595
Bst4CI ACNGT 5 cut(s) 418, 1155, 1463, 2459, 2782
Bst6I CTCTTC 5 cut(s) 27, 250, 1422, 2168, 2694
BstBAI YACGTR 1 cut(s) 2026
BstBI TTCGAA 2 cut(s) 253, 2801
BstC8I GCNNGC 6 cut(s) 453, 541, 1108, 2411, 2529, 2613
BstDEI CTNAG 6 cut(s) 612, 1271, 1785, 1895, 2589, 2763
BstDSI CCRYGG 1 cut(s) 1363
BstEII GGTNACC 4 cut(s) 2051, 2330, 2438, 2459
BstF5I GGATG 7 cut(s) 331, 823, 923, 940, 1181, 1615, 1679
BstFNI CGCG 2 cut(s) 2415, 2623
BstH2I RGCGCY 2 cut(s) 1999, 2603
BstHHI GCGC 3 cut(s) 1998, 2415, 2602
BstMAI GTCTC 4 cut(s) 135, 312, 932, 2423
BstMCI CGRYCG 5 cut(s) 58, 2328, 2429, 2436, 2478
BstMWI GCNNNNNNNGC 7 cut(s) 95, 457, 671, 1103, 2345, 2608, 2755
BstNSI RCATGY 2 cut(s) 1071, 1851
BstPI GGTNACC 4 cut(s) 2051, 2330, 2438, 2459
BstSCI CCNGG 3 cut(s) 1605, 2334, 2463
BstSFI CTRYAG 2 cut(s) 876, 2507
BstSLI GKGCMC 5 cut(s) 611, 874, 1085, 1480, 1659
BstUI CGCG 2 cut(s) 2415, 2623
BstV1I GCAGC 3 cut(s) 14, 1529, 2521
BstV2I GAAGAC 1 cut(s) 57
BstX2I RGATCY 3 cut(s) 715, 1972, 2625
BstXI CCANNNNNNTGG 1 cut(s) 1494
BstYI RGATCY 3 cut(s) 715, 1972, 2625
BstZI CGGCCG 1 cut(s) 2325
Bsu15I ATCGAT 1 cut(s) 1075
BsuRI GGCC 5 cut(s) 2264, 2327, 2348, 2409, 2786
BsuTUI ATCGAT 1 cut(s) 1075
BtgI CCRYGG 1 cut(s) 1363
BtrI CACGTC 2 cut(s) 1484, 2607
BtsCI GGATG 7 cut(s) 331, 823, 923, 940, 1181, 1615, 1679
BtsI GCAGTG 1 cut(s) 2718
BtsIMutI CAGTG 6 cut(s) 238, 1940, 2272, 2356, 2718, 2787
BveI ACCTGC 1 cut(s) 656
Cac8I GCNNGC 6 cut(s) 453, 541, 1108, 2411, 2529, 2613
CaiI CAGNNNCTG 1 cut(s) 1958
CfoI GCGC 3 cut(s) 1998, 2415, 2602
Cfr10I RCCGGY 5 cut(s) 2327, 2409, 2428, 2435, 2786
Cfr13I GGNCC 3 cut(s) 590, 745, 2793
ClaI ATCGAT 1 cut(s) 1075
CseI GACGC 1 cut(s) 680
Csp6I GTAC 5 cut(s) 173, 846, 1182, 1347, 1956
CspAI ACCGGT 1 cut(s) 2435
CspCI CAANNNNNGTGG 2 cut(s) 564, 599
CviQI GTAC 5 cut(s) 173, 846, 1182, 1347, 1956
DdeI CTNAG 6 cut(s) 612, 1271, 1785, 1895, 2589, 2763
DraIII CACNNNGTG 1 cut(s) 2108
EaeI YGGCCR 5 cut(s) 2262, 2325, 2346, 2407, 2784
EagI CGGCCG 1 cut(s) 2325
Eam1104I CTCTTC 5 cut(s) 27, 250, 1422, 2168, 2694
EarI CTCTTC 5 cut(s) 27, 250, 1422, 2168, 2694
EciI GGCGGA 1 cut(s) 266
Ecl136II GAGCTC 2 cut(s) 37, 1390
EclXI CGGCCG 1 cut(s) 2325
Eco130I CCWWGG 3 cut(s) 1363, 1521, 2595
Eco24I GRGCYC 4 cut(s) 39, 91, 1392, 2341
Eco31I GGTCTC 1 cut(s) 2423
Eco32I GATATC 1 cut(s) 387
Eco47I GGWCC 3 cut(s) 590, 745, 2793
Eco52I CGGCCG 1 cut(s) 2325
Eco53kI GAGCTC 2 cut(s) 37, 1390
Eco57I CTGAAG 2 cut(s) 69, 1206
Eco91I GGTNACC 4 cut(s) 2051, 2330, 2438, 2459
EcoICRI GAGCTC 2 cut(s) 37, 1390
EcoO65I GGTNACC 4 cut(s) 2051, 2330, 2438, 2459
EcoRI GAATTC 3 cut(s) 1562, 1867, 2803
EcoRV GATATC 1 cut(s) 387
EcoT14I CCWWGG 3 cut(s) 1363, 1521, 2595
EcoT22I ATGCAT 3 cut(s) 265, 1069, 1911
EcoT38I GRGCYC 4 cut(s) 39, 91, 1392, 2341
ErhI CCWWGG 3 cut(s) 1363, 1521, 2595
Esp3I CGTCTC 2 cut(s) 135, 312
FauI CCCGC 1 cut(s) 2604
FblI GTMKAC 1 cut(s) 2234
Fnu4HI GCNGC 7 cut(s) 28, 1518, 2259, 2262, 2325, 2346, 2510
FokI GGATG 7 cut(s) 338, 830, 930, 947, 1188, 1622, 1666
FriOI GRGCYC 4 cut(s) 39, 91, 1392, 2341
Fsp4HI GCNGC 7 cut(s) 28, 1518, 2259, 2262, 2325, 2346, 2510
FspBI CTAG 7 cut(s) 1224, 1602, 1881, 2076, 2090, 2136, 2582
GlaI GCGC 3 cut(s) 1997, 2414, 2601
GluI GCNGC 7 cut(s) 28, 1518, 2259, 2262, 2325, 2346, 2510
GsaI CCCAGC 1 cut(s) 2683
GsuI CTGGAG 1 cut(s) 2325
HaeII RGCGCY 2 cut(s) 1999, 2603
HaeIII GGCC 5 cut(s) 2264, 2327, 2348, 2409, 2786
HgaI GACGC 1 cut(s) 680
HhaI GCGC 3 cut(s) 1998, 2415, 2602
Hin6I GCGC 3 cut(s) 1996, 2413, 2600
HinP1I GCGC 3 cut(s) 1996, 2413, 2600
HincII GTYRAC 1 cut(s) 335
HindII GTYRAC 1 cut(s) 335
HindIII AAGCTT 3 cut(s) 11, 96, 794
Hpy188I TCNGA 9 cut(s) 181, 436, 2062, 2544, 2650, 2671, 2766, 2797, 2809
Hpy188III TCNNGA 7 cut(s) 593, 1139, 1147, 1795, 2293, 2822, 2857
Hpy99I CGWCG 3 cut(s) 87, 2779, 2813
HpyAV CCTTC 7 cut(s) 217, 610, 1741, 1907, 2501, 2633, 2725
HpyCH4III ACNGT 5 cut(s) 418, 1155, 1463, 2459, 2782
HpyCH4IV ACGT 3 cut(s) 1483, 2025, 2606
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 457, 671, 1103, 2345, 2608, 2755
HpyF3I CTNAG 6 cut(s) 612, 1271, 1785, 1895, 2589, 2763
HpySE526I ACGT 3 cut(s) 1483, 2025, 2606
HspAI GCGC 3 cut(s) 1996, 2413, 2600
Kpn2I TCCGGA 2 cut(s) 592, 2292
KroI GCCGGC 1 cut(s) 2409
KroNI GCCGGC 1 cut(s) 2411
LguI GCTCTTC 1 cut(s) 27
LmnI GCTCC 6 cut(s) 42, 94, 1387, 2224, 2344, 2562
Lsp1109I GCAGC 3 cut(s) 14, 1529, 2521
LweI GCATC 5 cut(s) 58, 250, 272, 526, 1896
MaeI CTAG 7 cut(s) 1224, 1602, 1881, 2076, 2090, 2136, 2582
MaeII ACGT 3 cut(s) 1483, 2025, 2606
MfeI CAATTG 2 cut(s) 740, 1044
MflI RGATCY 3 cut(s) 715, 1972, 2625
MhlI GDGCHC 9 cut(s) 39, 91, 611, 874, 1085, 1392, 1480, 1659, 2341
MmeI TCCRAC 6 cut(s) 639, 862, 1428, 2010, 2699, 2832
Mph1103I ATGCAT 3 cut(s) 265, 1069, 1911
MroI TCCGGA 2 cut(s) 592, 2292
MroNI GCCGGC 1 cut(s) 2409
MroXI GAANNNNTTC 3 cut(s) 14, 227, 1154
MseI TTAA 9 cut(s) 696, 888, 1296, 1395, 1508, 1692, 1979, 2160, 2357
MslI CAYNNNNRTG 3 cut(s) 180, 444, 1410
MspA1I CMGCKG 1 cut(s) 2345
MspR9I CCNGG 3 cut(s) 1607, 2336, 2465
MunI CAATTG 2 cut(s) 740, 1044
Mva1269I GAATGC 4 cut(s) 171, 1108, 2070, 2531
MvnI CGCG 2 cut(s) 2415, 2623
MwoI GCNNNNNNNGC 7 cut(s) 95, 457, 671, 1103, 2345, 2608, 2755
NaeI GCCGGC 1 cut(s) 2411
NciI CCSGG 3 cut(s) 1607, 2336, 2465
NcoI CCATGG 1 cut(s) 1363
NgoMIV GCCGGC 1 cut(s) 2409
NlaIV GGNNCC 6 cut(s) 90, 717, 2340, 2469, 2564, 2794
NsiI ATGCAT 3 cut(s) 265, 1069, 1911
NspI RCATGY 2 cut(s) 1071, 1851
NspV TTCGAA 2 cut(s) 253, 2801
PaqCI CACCTGC 1 cut(s) 656
PciI ACATGT 1 cut(s) 1847
PciSI GCTCTTC 1 cut(s) 27
PcsI WCGNNNNNNNCGW 1 cut(s) 2612
PctI GAATGC 4 cut(s) 171, 1108, 2070, 2531
PdiI GCCGGC 1 cut(s) 2411
PdmI GAANNNNTTC 3 cut(s) 14, 227, 1154
Pfl23II CGTACG 1 cut(s) 845
PinAI ACCGGT 1 cut(s) 2435
PkrI GCNGC 7 cut(s) 29, 1519, 2260, 2263, 2326, 2347, 2511
Ppu21I YACGTR 1 cut(s) 2026
PscI ACATGT 1 cut(s) 1847
PshBI ATTAAT 1 cut(s) 1692
Psp124BI GAGCTC 2 cut(s) 39, 1392
PspEI GGTNACC 4 cut(s) 2051, 2330, 2438, 2459
PspFI CCCAGC 1 cut(s) 2679
PspLI CGTACG 1 cut(s) 845
PspN4I GGNNCC 6 cut(s) 90, 717, 2340, 2469, 2564, 2794
PspPI GGNCC 3 cut(s) 590, 745, 2793
PstI CTGCAG 1 cut(s) 2511
PstNI CAGNNNCTG 1 cut(s) 1958
PsuI RGATCY 3 cut(s) 715, 1972, 2625
RsaI GTAC 5 cut(s) 174, 847, 1183, 1348, 1957
RsaNI GTAC 5 cut(s) 173, 846, 1182, 1347, 1956
RseI CAYNNNNRTG 3 cut(s) 180, 444, 1410
SacI GAGCTC 2 cut(s) 39, 1392
SapI GCTCTTC 1 cut(s) 27
SaqAI TTAA 9 cut(s) 696, 888, 1296, 1395, 1508, 1692, 1979, 2160, 2357
SatI GCNGC 7 cut(s) 28, 1518, 2259, 2262, 2325, 2346, 2510
Sau96I GGNCC 3 cut(s) 590, 745, 2793
ScaI AGTACT 1 cut(s) 1183
ScrFI CCNGG 3 cut(s) 1607, 2336, 2465
SduI GDGCHC 9 cut(s) 39, 91, 611, 874, 1085, 1392, 1480, 1659, 2341
SfaNI GCATC 5 cut(s) 58, 250, 272, 526, 1896
SfcI CTRYAG 2 cut(s) 876, 2507
SfuI TTCGAA 2 cut(s) 253, 2801
SinI GGWCC 3 cut(s) 590, 745, 2793
SmiMI CAYNNNNRTG 3 cut(s) 180, 444, 1410
SmlI CTYRAG 2 cut(s) 93, 1139
SmoI CTYRAG 2 cut(s) 93, 1139
SpeI ACTAGT 1 cut(s) 2089
SspI AATATT 1 cut(s) 517
SspMI CTAG 7 cut(s) 1224, 1602, 1881, 2076, 2090, 2136, 2582
SstI GAGCTC 2 cut(s) 39, 1392
StyD4I CCNGG 3 cut(s) 1605, 2334, 2463
StyI CCWWGG 3 cut(s) 1363, 1521, 2595
TaaI ACNGT 5 cut(s) 418, 1155, 1463, 2459, 2782
TaiI ACGT 3 cut(s) 1486, 2028, 2609
TaqI TCGA 7 cut(s) 8, 42, 253, 1075, 1198, 2801, 2856
TatI WGTACW 3 cut(s) 172, 1181, 1346
TauI GCSGC 4 cut(s) 2261, 2264, 2327, 2348
Tru1I TTAA 9 cut(s) 696, 888, 1296, 1395, 1508, 1692, 1979, 2160, 2357
Tru9I TTAA 9 cut(s) 696, 888, 1296, 1395, 1508, 1692, 1979, 2160, 2357
TscAI CASTG 6 cut(s) 238, 1947, 2272, 2356, 2718, 2787
TseI GCWGC 3 cut(s) 27, 1517, 2509
TspDTI ATGAA 7 cut(s) 594, 666, 1035, 1194, 1926, 2006, 2141
TspGWI ACGGA 2 cut(s) 2182, 2670
TspRI CASTG 6 cut(s) 238, 1947, 2272, 2356, 2718, 2787
VneI GTGCAC 5 cut(s) 607, 870, 1081, 1476, 1655
VpaK11BI GGWCC 3 cut(s) 590, 745, 2793
VspI ATTAAT 1 cut(s) 1692
XapI RAATTY 7 cut(s) 766, 1193, 1397, 1562, 1867, 2035, 2803
XceI RCATGY 2 cut(s) 1071, 1851
XcmI CCANNNNNNNNNTGG 3 cut(s) 1169, 2063, 2356
XmiI GTMKAC 1 cut(s) 2234
XmnI GAANNNNTTC 3 cut(s) 14, 227, 1154
XspI CTAG 7 cut(s) 1224, 1602, 1881, 2076, 2090, 2136, 2582
ZrmI AGTACT 1 cut(s) 1183
Zsp2I ATGCAT 3 cut(s) 265, 1069, 1911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.