Rw7G037700

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000165
Physical Location & Seq
Reverse (-)
57152045 .. 57154654
2610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G037700.1

Sequence Viewer

Length: 2055 bp
ATGGAGGAGATTGCTGGAGAAGATGGAGAACTAAAGCCGGGTATGCAAGTATATTCTGATGATGAAGCTTATAATCTATACAATAATTATGCTTTGAGAAAAGGATTTAGTATTCGTAAAGGGCATATAAGAAGAGATGCATTAGGTAATGTTCGATTGAGAGAGTTTATGTGTGCGAAAGAGGGGTTTGCAAGAGACCAAGATACATTTGAACATAAAAGATATAAGAAGTTAGAGACAAGAACCGGTTGCAAGGCTATGATTGTATTTATTGTCGCAGATGGAATATGGACAATTTCTCATATCAATTCAGAGCATAACCATGACCTTGCTAGGCCTGAAGAAAGACAATTTCTGAAATCAGGCCGAAAAGTATTGGAGGCTCATGGAAATGTCATGCTTTCTATGTTAGGTGCTGGTATACCGCCAACAAAATCATTCTTCTACCTAGCAAATGAAATGGGCGGTCCTGAGAGGAAGAAAAATGAAATGCTTGAAGCAGGGGATGGACAGAGTTTGCTCAATCACTTTAAGCGCAAACAAGGTGAGGATCCTAACTTTTTCTACTCAATGCAATTAGACCAATATAGTCGAATGACAAATTTCTTTTGGAGAGATAATAGATCAAAATTTGATTATGATTGTTTTGGTGCTGTTATTTGCTTCGATACCACATTCCGTACAAACAAGTATAATTTGATTTGTGCTTCTATAGTGGGAGTCAATCATCATTGGAGAAATGTGATGTTTGGATGTGCCTTTTTATTGGATGAGACTACCGAGTCATTTGTTTGGTTGTTTGAGTCATTTTTGGAATCGATGGGAAATAAAGCACCAAAAACTATTTTTACAGATGAAGATAAAGCAATGGCAAAAGCAATTGGGCAAGTTTTTCCAGGTACACAGCATCGGTTATGCACTTGGCATATTTCTAAGAATGCTGGAAAGAGAATTGGTAGTTACCTTGCCAATCCTGAGTTCAAGAAACAATTCAACAAGTGTTTGCATGGCTGTAGTACTGAAACTGAATTTCAAGCTTCATGGGATGATATGATCAGTAGATATAATCTTGGTGGTAATACATGGCTTGAGAAGTTGAATTCGCTCCGGGAGAAATGGTGTCCAGTTTTTAGTTTGGACACCTTTTCAGCAAAAATTAGATCAACTCAAAGGAGTGAAAGTACTAACAATGTGTTCCATCAAATCTCTACACACACAATGGAGCTCATCAAATTTGTGCATCACTATGAGAAAAAAATTGAAGAGATGCGTTTGGCGGAGTTAATGTTAAGGAGAGCAGCTAAGGTGTATACCATTAAAATGTTTCAGCTATTTGAAACAGAGTTTGTTGGCTGTATGGGAGTTAGACTAAAAGAAGCTTTCAAGAGGGATGAAGTACATTCATATGAAGCAATTGAAGATGGTAAACAAAGTGTACACAAGATTCAGTATAACTCTATATCCTTCGACATTTCTTGTTCTTGCAAGTCTTTTGAATCACTTGGAATCTTGTGTAGTCATGCTTTGAAGGTGTTTGATATCAATAATGTCACTGTTTTACCCACTCAATATATATTGAAGAGGTGGACTAGAGAAGCAAAGAAAGGGATAGTGGTAAGCAATAACATTTCTGGAGGTACAAGTGAGAATATAAAGTCTGCTAGATTGTTGCGCCTTAGTGAGCTAATGCATGAAGGAAATAGTGTTTATGACATAGCTTCATTGAGTTATTCAGGGACTAAGATTGTGAAGGAGCTATTAGTAGAGGCAATGAAGCGTCTTGAGAAAGACAAGGAAACTCAGGACATGTTGGAAAATTTGAACAAAGTTGGTAATCAGTCCAATCTTGACATTCCAATAAACTCAAGTCATGTTTTAGATCCACCATGTGCCAAGACTAAAGGAATGACAAATGAAAGAATCAAAGACATAAGGGAGAAAAAACAACGGAAGAATAAGAAAACAAAAGCTAGTTTGTTCCCTATTTTGTACAGAACTCCTGCAACTCTGCAAGTACTAATAGAAGAGTATTGTGAAAGGAAGAAGTATACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

684

Amino Acids

78.97

Weight (kDa)

8.94

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 26 - 111 1.2e-19 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 184 - 302 1.1e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 219 - 313 8e-31 MULE transposase domain
SWIM PF04434 489 - 512 1.7e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
AasI GACNNNNNNGTC 1 cut(s) 781
AccI GTMKAC 3 cut(s) 421, 1310, 2048
AciI CCGC 3 cut(s) 425, 465, 1277
AclWI GGATC 3 cut(s) 545, 558, 1874
AcsI RAATTY 6 cut(s) 601, 629, 1028, 1099, 1232, 1816
AcuI CTGAAG 1 cut(s) 360
AdeI CACNNNGTG 1 cut(s) 1889
AfaI GTAC 9 cut(s) 682, 901, 1018, 1183, 1398, 1437, 1639, 1991, 2016
AflIII ACRYGT 1 cut(s) 1806
AgeI ACCGGT 1 cut(s) 245
AjnI CCWGG 1 cut(s) 895
AjuI GAANNNNNNNTTGG 2 cut(s) 962, 994
Alw21I GWGCWC 1 cut(s) 1227
Alw26I GTCTC 3 cut(s) 189, 230, 767
AlwI GGATC 3 cut(s) 545, 558, 1874
AoxI GGCC 2 cut(s) 335, 364
ApeKI GCWGC 1 cut(s) 1298
ApoI RAATTY 6 cut(s) 601, 629, 1028, 1099, 1232, 1816
AsiGI ACCGGT 1 cut(s) 245
Asp700I GAANNNNTTC 1 cut(s) 989
AspLEI GCGC 2 cut(s) 537, 1674
AspS9I GGNCC 1 cut(s) 467
AsuC2I CCSGG 2 cut(s) 39, 1109
AsuHPI GGTGA 1 cut(s) 557
AvaII GGWCC 1 cut(s) 467
BamHI GGATCC 1 cut(s) 550
BanII GRGCYC 1 cut(s) 1227
Bbv12I GWGCWC 1 cut(s) 1227
BbvI GCAGC 1 cut(s) 1310
BccI CCATC 6 cut(s) 17, 275, 500, 814, 1206, 1415
BciT130I CCWGG 1 cut(s) 897
BclI TGATCA 1 cut(s) 1053
BcnI CCSGG 2 cut(s) 39, 1109
BcoDI GTCTC 3 cut(s) 189, 230, 767
BfaI CTAG 5 cut(s) 333, 449, 1590, 1662, 1971
BfmI CTRYAG 2 cut(s) 711, 1012
BisI GCNGC 1 cut(s) 1299
BlsI GCNGC 1 cut(s) 1300
BmcAI AGTACT 3 cut(s) 1018, 1183, 2016
Bme1390I CCNGG 3 cut(s) 39, 897, 1109
Bme18I GGWCC 1 cut(s) 467
BmgT120I GGNCC 1 cut(s) 467
BmiI GGNNCC 1 cut(s) 552
BmrFI CCNGG 3 cut(s) 39, 897, 1109
BmsI GCATC 4 cut(s) 127, 916, 1249, 1257
BpmI CTGGAG 2 cut(s) 36, 1653
Bpu10I CCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 3 cut(s) 1109, 1802, 1849
BpuMI CCSGG 2 cut(s) 39, 1109
Bsa29I ATCGAT 1 cut(s) 818
BsaI GGTCTC 1 cut(s) 189
BsaWI WCCGGW 1 cut(s) 245
BsaXI ACNNNNNCTCC 6 cut(s) 1103, 1133, 1165, 1195, 1271, 1301
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 1 cut(s) 1124
Bse3DI GCAATG 2 cut(s) 873, 1776
BseBI CCWGG 1 cut(s) 897
BseCI ATCGAT 1 cut(s) 818
BseGI GGATG 5 cut(s) 511, 758, 775, 1051, 1396
BseMI GCAATG 2 cut(s) 873, 1776
BseMII CTCAG 3 cut(s) 462, 966, 1814
BseNI ACTGG 1 cut(s) 1124
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 1310
BshFI GGCC 2 cut(s) 337, 366
BshTI ACCGGT 1 cut(s) 245
BshVI ATCGAT 1 cut(s) 818
BsiHKAI GWGCWC 1 cut(s) 1227
BsiSI CCGG 3 cut(s) 38, 246, 1108
BslFI GGGAC 1 cut(s) 1750
BsmAI GTCTC 3 cut(s) 189, 230, 767
BsmFI GGGAC 1 cut(s) 1750
BsmI GAATGC 1 cut(s) 943
BsnI GGCC 2 cut(s) 337, 366
Bso31I GGTCTC 1 cut(s) 189
Bsp1286I GDGCHC 1 cut(s) 1227
Bsp1407I TGTACA 2 cut(s) 1435, 1989
Bsp143I GATC 5 cut(s) 550, 623, 1053, 1160, 1879
BspACI CCGC 3 cut(s) 425, 465, 1277
BspANI GGCC 2 cut(s) 337, 366
BspCNI CTCAG 3 cut(s) 463, 967, 1813
BspDI ATCGAT 1 cut(s) 818
BspLI GGNNCC 1 cut(s) 552
BspPI GGATC 3 cut(s) 545, 558, 1874
BspTNI GGTCTC 1 cut(s) 189
BsrDI GCAATG 2 cut(s) 873, 1776
BsrFI RCCGGY 1 cut(s) 245
BsrGI TGTACA 2 cut(s) 1435, 1989
BsrI ACTGG 1 cut(s) 1124
BssAI RCCGGY 1 cut(s) 245
BssMI GATC 5 cut(s) 550, 623, 1053, 1160, 1879
BssNAI GTATAC 3 cut(s) 422, 1311, 2049
Bst1107I GTATAC 3 cut(s) 422, 1311, 2049
Bst2UI CCWGG 1 cut(s) 897
Bst4CI ACNGT 1 cut(s) 1555
Bst6I CTCTTC 4 cut(s) 127, 1257, 1574, 2019
BstAUI TGTACA 2 cut(s) 1435, 1989
BstDEI CTNAG 7 cut(s) 471, 933, 975, 1302, 1676, 1740, 1800
BstF5I GGATG 5 cut(s) 511, 758, 775, 1051, 1396
BstHHI GCGC 2 cut(s) 537, 1674
BstKTI GATC 5 cut(s) 553, 626, 1056, 1163, 1882
BstMAI GTCTC 3 cut(s) 189, 230, 767
BstMBI GATC 5 cut(s) 550, 623, 1053, 1160, 1879
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstNI CCWGG 1 cut(s) 897
BstNSI RCATGY 1 cut(s) 1810
BstSCI CCNGG 3 cut(s) 37, 895, 1107
BstSFI CTRYAG 2 cut(s) 711, 1012
BstV1I GCAGC 1 cut(s) 1310
BstX2I RGATCY 2 cut(s) 550, 1879
BstYI RGATCY 2 cut(s) 550, 1879
BstZ17I GTATAC 3 cut(s) 422, 1311, 2049
Bsu15I ATCGAT 1 cut(s) 818
BsuRI GGCC 2 cut(s) 337, 366
BsuTUI ATCGAT 1 cut(s) 818
BtsCI GGATG 5 cut(s) 511, 758, 775, 1051, 1396
BtsIMutI CAGTG 1 cut(s) 1551
CfoI GCGC 2 cut(s) 537, 1674
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 1 cut(s) 467
ClaI ATCGAT 1 cut(s) 818
CseI GACGC 1 cut(s) 1766
Csp6I GTAC 9 cut(s) 681, 900, 1017, 1182, 1397, 1436, 1638, 1990, 2015
CspAI ACCGGT 1 cut(s) 245
CviQI GTAC 9 cut(s) 681, 900, 1017, 1182, 1397, 1436, 1638, 1990, 2015
DdeI CTNAG 7 cut(s) 471, 933, 975, 1302, 1676, 1740, 1800
DpnI GATC 5 cut(s) 552, 625, 1055, 1162, 1881
DpnII GATC 5 cut(s) 550, 623, 1053, 1160, 1879
DraIII CACNNNGTG 1 cut(s) 1889
DrdI GACNNNNNNGTC 1 cut(s) 781
DseDI GACNNNNNNGTC 1 cut(s) 781
Eam1104I CTCTTC 4 cut(s) 127, 1257, 1574, 2019
EarI CTCTTC 4 cut(s) 127, 1257, 1574, 2019
EciI GGCGGA 1 cut(s) 1292
Ecl136II GAGCTC 1 cut(s) 1225
Eco147I AGGCCT 1 cut(s) 337
Eco24I GRGCYC 1 cut(s) 1227
Eco31I GGTCTC 1 cut(s) 189
Eco32I GATATC 1 cut(s) 1540
Eco47I GGWCC 1 cut(s) 467
Eco53kI GAGCTC 1 cut(s) 1225
Eco57I CTGAAG 1 cut(s) 360
EcoICRI GAGCTC 1 cut(s) 1225
EcoRI GAATTC 1 cut(s) 1099
EcoRII CCWGG 1 cut(s) 895
EcoRV GATATC 1 cut(s) 1540
EcoT22I ATGCAT 2 cut(s) 142, 1692
EcoT38I GRGCYC 1 cut(s) 1227
FaqI GGGAC 1 cut(s) 1750
FauNDI CATATG 1 cut(s) 1405
FbaI TGATCA 1 cut(s) 1053
FblI GTMKAC 3 cut(s) 421, 1310, 2048
Fnu4HI GCNGC 1 cut(s) 1299
FokI GGATG 5 cut(s) 518, 765, 782, 1058, 1403
FriOI GRGCYC 1 cut(s) 1227
Fsp4HI GCNGC 1 cut(s) 1299
FspBI CTAG 5 cut(s) 333, 449, 1590, 1662, 1971
GlaI GCGC 2 cut(s) 536, 1673
GluI GCNGC 1 cut(s) 1299
GsuI CTGGAG 2 cut(s) 36, 1653
HaeIII GGCC 2 cut(s) 337, 366
HapII CCGG 3 cut(s) 38, 246, 1108
HgaI GACGC 1 cut(s) 1766
HhaI GCGC 2 cut(s) 537, 1674
Hin6I GCGC 2 cut(s) 535, 1672
HinP1I GCGC 2 cut(s) 535, 1672
HindIII AAGCTT 3 cut(s) 66, 1035, 1377
HinfI GANTC 8 cut(s) 720, 782, 803, 815, 1444, 1496, 1506, 1920
HpaII CCGG 3 cut(s) 38, 246, 1108
HphI GGTGA 1 cut(s) 557
Hpy166II GTNNAC 8 cut(s) 422, 902, 1311, 1427, 1436, 1438, 1587, 2049
Hpy188I TCNGA 3 cut(s) 58, 313, 357
Hpy188III TCNNGA 8 cut(s) 470, 974, 982, 1384, 1632, 1781, 1802, 1847
Hpy8I GTNNAC 8 cut(s) 422, 902, 1311, 1427, 1436, 1438, 1587, 2049
HpyAV CCTTC 4 cut(s) 1474, 1522, 1688, 1744
HpyCH4III ACNGT 1 cut(s) 1555
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpyF3I CTNAG 7 cut(s) 471, 933, 975, 1302, 1676, 1740, 1800
HspAI GCGC 2 cut(s) 535, 1672
Ksp22I TGATCA 1 cut(s) 1053
Kzo9I GATC 5 cut(s) 550, 623, 1053, 1160, 1879
LmnI GCTCC 3 cut(s) 1110, 1222, 1753
Lsp1109I GCAGC 1 cut(s) 1310
LweI GCATC 4 cut(s) 127, 916, 1249, 1257
MaeI CTAG 5 cut(s) 333, 449, 1590, 1662, 1971
MaeIII GTNAC 2 cut(s) 959, 1549
MalI GATC 5 cut(s) 552, 625, 1055, 1162, 1881
MboI GATC 5 cut(s) 550, 623, 1053, 1160, 1879
MfeI CAATTG 2 cut(s) 879, 1413
MflI RGATCY 2 cut(s) 550, 1879
MhlI GDGCHC 1 cut(s) 1227
MlyI GAGTC 3 cut(s) 729, 791, 812
MmeI TCCRAC 1 cut(s) 1791
MnlI CCTC 8 cut(s) 175, 373, 468, 541, 1380, 1575, 1628, 1759
Mph1103I ATGCAT 2 cut(s) 142, 1692
MroXI GAANNNNTTC 1 cut(s) 989
MseI TTAA 4 cut(s) 531, 1283, 1289, 1317
MslI CAYNNNNRTG 5 cut(s) 321, 390, 1245, 1319, 1404
MspI CCGG 3 cut(s) 38, 246, 1108
MspR9I CCNGG 3 cut(s) 39, 897, 1109
MunI CAATTG 2 cut(s) 879, 1413
Mva1269I GAATGC 1 cut(s) 943
MvaI CCWGG 1 cut(s) 897
MwoI GCNNNNNNNGC 1 cut(s) 43
NciI CCSGG 2 cut(s) 39, 1109
NdeI CATATG 1 cut(s) 1405
NdeII GATC 5 cut(s) 550, 623, 1053, 1160, 1879
NlaIV GGNNCC 1 cut(s) 552
NmuCI GTSAC 1 cut(s) 1549
NsiI ATGCAT 2 cut(s) 142, 1692
NspI RCATGY 1 cut(s) 1810
PceI AGGCCT 1 cut(s) 337
PciI ACATGT 1 cut(s) 1806
PctI GAATGC 1 cut(s) 943
PdmI GAANNNNTTC 1 cut(s) 989
PfeI GAWTC 5 cut(s) 815, 1444, 1496, 1506, 1920
PfoI TCCNGGA 1 cut(s) 1107
PinAI ACCGGT 1 cut(s) 245
PkrI GCNGC 1 cut(s) 1300
PleI GAGTC 3 cut(s) 728, 790, 811
PpsI GAGTC 3 cut(s) 728, 790, 811
PscI ACATGT 1 cut(s) 1806
PsiI TTATAA 1 cut(s) 72
Psp124BI GAGCTC 1 cut(s) 1227
Psp6I CCWGG 1 cut(s) 895
PspGI CCWGG 1 cut(s) 895
PspN4I GGNNCC 1 cut(s) 552
PspPI GGNCC 1 cut(s) 467
PsuI RGATCY 2 cut(s) 550, 1879
RsaI GTAC 9 cut(s) 682, 901, 1018, 1183, 1398, 1437, 1639, 1991, 2016
RsaNI GTAC 9 cut(s) 681, 900, 1017, 1182, 1397, 1436, 1638, 1990, 2015
RseI CAYNNNNRTG 5 cut(s) 321, 390, 1245, 1319, 1404
SacI GAGCTC 1 cut(s) 1227
SaqAI TTAA 4 cut(s) 531, 1283, 1289, 1317
SatI GCNGC 1 cut(s) 1299
Sau3AI GATC 5 cut(s) 550, 623, 1053, 1160, 1879
Sau96I GGNCC 1 cut(s) 467
ScaI AGTACT 3 cut(s) 1018, 1183, 2016
SchI GAGTC 3 cut(s) 729, 791, 812
ScrFI CCNGG 3 cut(s) 39, 897, 1109
SduI GDGCHC 1 cut(s) 1227
SfaNI GCATC 4 cut(s) 127, 916, 1249, 1257
SfcI CTRYAG 2 cut(s) 711, 1012
SinI GGWCC 1 cut(s) 467
SmiMI CAYNNNNRTG 5 cut(s) 321, 390, 1245, 1319, 1404
SmlI CTYRAG 3 cut(s) 1088, 1781, 1864
SmoI CTYRAG 3 cut(s) 1088, 1781, 1864
SseBI AGGCCT 1 cut(s) 337
SsiI CCGC 3 cut(s) 425, 465, 1277
SspMI CTAG 5 cut(s) 333, 449, 1590, 1662, 1971
SstI GAGCTC 1 cut(s) 1227
StuI AGGCCT 1 cut(s) 337
StyD4I CCNGG 3 cut(s) 37, 895, 1107
TaaI ACNGT 1 cut(s) 1555
TaqI TCGA 5 cut(s) 154, 592, 666, 818, 1467
TatI WGTACW 6 cut(s) 1016, 1181, 1396, 1435, 1989, 2014
TfiI GAWTC 5 cut(s) 815, 1444, 1496, 1506, 1920
Tru1I TTAA 4 cut(s) 531, 1283, 1289, 1317
Tru9I TTAA 4 cut(s) 531, 1283, 1289, 1317
TscAI CASTG 1 cut(s) 1558
TseFI GTSAC 1 cut(s) 1549
TseI GCWGC 1 cut(s) 1298
Tsp45I GTSAC 1 cut(s) 1549
TspGWI ACGGA 2 cut(s) 668, 1963
TspRI CASTG 1 cut(s) 1558
VpaK11BI GGWCC 1 cut(s) 467
XapI RAATTY 6 cut(s) 601, 629, 1028, 1099, 1232, 1816
XceI RCATGY 1 cut(s) 1810
XmiI GTMKAC 3 cut(s) 421, 1310, 2048
XmnI GAANNNNTTC 1 cut(s) 989
XspI CTAG 5 cut(s) 333, 449, 1590, 1662, 1971
ZrmI AGTACT 3 cut(s) 1018, 1183, 2016
Zsp2I ATGCAT 2 cut(s) 142, 1692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.