Rw3G020550

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000165
Physical Location & Seq
Forward (+)
24107013 .. 24113539
6527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G020550.1

Sequence Viewer

Length: 2403 bp
ATGTCTACCTTCATTGATGTGGAAAGTGATGATGAGAATAATGAAGGTAATAACCGGGAAGATCCAAGCATTGTGAATCGTCAAGGAAGTTTCGATGAAGATGATTTGTTTGGAAAGATGGTGTGTAGTGAAGTGGAAGCCTATGAATTCTATAACAGTTATGCTACAAGAATTGGGTTTAGTGTTCGAAAGGGAAAAAAAAGAAGAGATGCAAAGAATGTTGTTCGACAAATTAACTTCATGTGTTCAAAAGAAGGTTTTCAACAGGATAGTGATCCTTCAGAAACCAAAAGGGCTGATAGGCTAGATACAAGAACAGGTTGCAAAGCCATGATCCGATTTACATTAGCAGAGGACATGTGGAGAGTTTCTCACTTTCATGCTGAGCACAATCACGAGCTTGCTAAGCCAGAAGAGAGACCATTTTTAAGATCAAATAGAAAAATGTCTGAAGCTCATAAAGGGGTGATAAAGACCATGCGTGATGCTCGTATAGGGACCATAAAGACATACTCATATTTAGCAGAAGAAGTTGGCGGATCTCAGAATGTTGGGTTTACAAAGAGAGATTGCTATAATTTTGTGAATAATGAGAAAATGGCTATGTTTGAGGCTGGAGATGCTCAAAGCTTAATCAATCTTTTCAAGCGTAAGCAAACTGAAGATCCTATGTTCTTTTACTCAGTGCAAGTGGATCAAGAAAATCGAATGACAAATTTCTTTTGGAGAGATGGTCGATCAAGACTTGATTATGAGTGCTTCGGAGATGTAGTAGTTTTTGATACTACATACAGAACCAACAGGTACAACATGATTTGTGCTCCTTTTGTGGGTGTTAATAACCATTGGAAAAATGTATTGTTTGGATGTGCTTTTCTATTGGATGAGACAACTGCTTCATTTAATTGGTTGTTTGAAACATTTTTAGAGTCAATGGGAAATCAACCACCAAAGACCATTTATACTGATCAATGTCAAGCAATGGCAAATGGCATTAGAGATGTTTTTCCTGGTACTTGTCACCGTTTATGCTTGTGGCATATATCGTTGAATGCAACAAGACATATAGCAAGCTACTTAGGAATCCCTGACTTTAAGAAGATGTTCAATAAGTGTCTTTATGGTTGTGAGACAGTTGCAGAATTTCAGTCTACATGGGATGAGTTACTTGTGACATTTAATGTTACAGAGAATGAATGGTTGAAGAGATTATATACACTACGGGAAAAATGGTGTGCAGCCTTCACCTTAGACACTTTTTCTGCTAGAATTCAAGCTTCACAAAGAAGTGAGAGCACAAATAATGTGTTCCATCATATATCTGCTGCAAGAATGAGGCTTATTGAATTTGTGCATCACTATGATAAGCAAGTAGAAGCCACACGCTCAAGTGAATTAGAAGAGACTTTTCGTTGCACAAATGGCGTACCTTCTACTGCTAAGAGGAGTACTAAACTACTATATCATGCTGGTAAAGTTTATACAAGAAAAATTTATAATTTATTTGGGACTGAGCTTACCGCTAGCATGGCATTCAAGATGGATGAAGTTGATACTAATGGAACTATACATACTTTTGAATTGAGTCAGGAGGGTCGCAATAGAATTTATGTTGTGAAGCTGAACTCTTCAGATGACACAATCACATGTAGCTGCAAGATGTTTGAATCTATGGGATTGTTGTGTCGTCATGCTCTAAGGGTATTGAATGTCAGGAATGTTACTAAGATCCCACCCCAATATATATTGAAGCGTTGGAAAAAGGATGCAAAATCTGGAATTGGGGCACAAGAACATGAAGCATTATTACAACAAAAGGATAAACCATCAGTTGTATTGCGTCGAAATAATATGGTTCGAAAAGCTTATGATATATTGAGCAAAGCTGCAATGACAGAGAAGGGTAGTAAAATTGCAATGCAAAAATTGAAAGAGATGGAAGAATTAATTGAAAAGGATGAGCTAGAGTCAAAAGGATTTGATCACAAAGAAAGCAATGAGGCTTTGAATGATGATGTTATTTCTGATGATAATGAAAGTGGCTGCCCAGTTAATGAGACACCATTATTGGATCCCCCATGTGCAAGGCCAAAAGGGATGAGTAATGATAGATGGAAAGCATCTGTGGAGAAGCGAAACAAGAATACATCTAAGAATACCCTTTATCCATCTATGAGCTTGTCGACAATCAATACTCAGGGATGTTTGCCTCCACCTAATCAGTTTCCTGCCATCCTCCTCCACAACAGGAGCAGTATTCATAAAGTAAGTCAGTTTATTCATCATCACCCACACACTTTTCTAATTTCTTTTGTGGGAAATCTATTAAGATTTCGATCAGTGCCCTTCATTCGTATCAGCTGGTCCTTCTTGGTCCAATGCCAACGTAGATTTAAATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

800

Amino Acids

92.57

Weight (kDa)

8.61

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 49 - 135 5.9e-24 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 222 - 338 1.7e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 257 - 349 1.1e-28 MULE transposase domain
SWIM PF04434 539 - 572 2.3e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1497
AccI GTMKAC 3 cut(s) 5, 1151, 2183
AciI CCGC 2 cut(s) 537, 1521
AclWI GGATC 9 cut(s) 56, 269, 328, 547, 659, 702, 1723, 2066, 2079
AcsI RAATTY 7 cut(s) 146, 715, 1142, 1269, 1346, 1491, 1605
AcuI CTGAAG 4 cut(s) 264, 471, 681, 1614
AfaI GTAC 4 cut(s) 806, 1015, 1428, 1450
AfiI CCNNNNNNNGG 1 cut(s) 830
AflIII ACRYGT 2 cut(s) 357, 1646
AjnI CCWGG 1 cut(s) 1009
Alw21I GWGCWC 3 cut(s) 390, 823, 1298
Alw26I GTCTC 5 cut(s) 412, 881, 1124, 1397, 2051
AlwI GGATC 9 cut(s) 56, 269, 328, 547, 659, 702, 1723, 2066, 2079
AoxI GGCC 1 cut(s) 2087
ApeKI GCWGC 5 cut(s) 1238, 1325, 1653, 1886, 2043
ApoI RAATTY 7 cut(s) 146, 715, 1142, 1269, 1346, 1491, 1605
AseI ATTAAT 1 cut(s) 1946
Asp700I GAANNNNTTC 2 cut(s) 258, 1103
AspS9I GGNCC 3 cut(s) 498, 2364, 2374
AsuC2I CCSGG 1 cut(s) 56
AsuHPI GGTGA 4 cut(s) 478, 1013, 1237, 2279
AsuII TTCGAA 2 cut(s) 187, 1858
AsuNHI GCTAGC 1 cut(s) 1523
AvaII GGWCC 3 cut(s) 498, 2364, 2374
BaeGI GKGCMC 2 cut(s) 1789, 2346
BamHI GGATCC 1 cut(s) 2071
BarI GAAGNNNNNNTAC 2 cut(s) 1791, 1823
BauI CACGAG 1 cut(s) 395
Bbv12I GWGCWC 3 cut(s) 390, 823, 1298
BbvI GCAGC 5 cut(s) 1250, 1312, 1640, 1873, 2030
BccI CCATC 9 cut(s) 112, 725, 1320, 1534, 1834, 1930, 2106, 2176, 2240
BciT130I CCWGG 1 cut(s) 1011
BclI TGATCA 2 cut(s) 967, 1981
BcnI CCSGG 1 cut(s) 56
BcoDI GTCTC 5 cut(s) 412, 881, 1124, 1397, 2051
BfaI CTAG 4 cut(s) 305, 1266, 1524, 1964
BisI GCNGC 5 cut(s) 1239, 1326, 1654, 1887, 2044
BlpI GCTNAGC 2 cut(s) 384, 405
BlsI GCNGC 5 cut(s) 1240, 1327, 1655, 1888, 2045
BmcAI AGTACT 1 cut(s) 1450
Bme1390I CCNGG 2 cut(s) 56, 1011
Bme18I GGWCC 3 cut(s) 498, 2364, 2374
BmgT120I GGNCC 3 cut(s) 498, 2364, 2374
BmiI GGNNCC 2 cut(s) 499, 2073
BmrFI CCNGG 2 cut(s) 56, 1011
BmrI ACTGGG 1 cut(s) 2042
BmsI GCATC 6 cut(s) 199, 475, 610, 1363, 1756, 2129
BmtI GCTAGC 1 cut(s) 1527
BmuI ACTGGG 1 cut(s) 2042
BplI GAGNNNNNCTC 2 cut(s) 355, 387
BpmI CTGGAG 1 cut(s) 636
Bpu1102I GCTNAGC 2 cut(s) 384, 405
Bpu14I TTCGAA 2 cut(s) 187, 1858
BpuEI CTTGAG 1 cut(s) 1372
BpuMI CCSGG 1 cut(s) 56
BsaBI GATNNNNATC 2 cut(s) 273, 2335
BsaI GGTCTC 1 cut(s) 412
BsaXI ACNNNNNCTCC 4 cut(s) 718, 748, 756, 786
Bsc4I CCNNNNNNNGG 1 cut(s) 830
Bse1I ACTGG 1 cut(s) 2048
Bse3DI GCAATG 4 cut(s) 987, 1896, 1923, 2002
Bse8I GATNNNNATC 2 cut(s) 273, 2335
BseBI CCWGG 1 cut(s) 1011
BseGI GGATG 9 cut(s) 872, 889, 1165, 1549, 1771, 1963, 2103, 2207, 2232
BseJI GATNNNNATC 2 cut(s) 273, 2335
BseLI CCNNNNNNNGG 1 cut(s) 830
BseMI GCAATG 4 cut(s) 987, 1896, 1923, 2002
BseMII CTCAG 5 cut(s) 375, 557, 696, 1503, 2210
BseNI ACTGG 1 cut(s) 2048
BseRI GAGGAG 2 cut(s) 1459, 2228
BseSI GKGCMC 2 cut(s) 1789, 2346
BseXI GCAGC 5 cut(s) 1250, 1312, 1640, 1873, 2030
BsgI GTGCAG 1 cut(s) 1257
BshFI GGCC 1 cut(s) 2089
BsiHKAI GWGCWC 3 cut(s) 390, 823, 1298
BsiSI CCGG 1 cut(s) 55
BslFI GGGAC 2 cut(s) 511, 1522
BslI CCNNNNNNNGG 1 cut(s) 830
BsmAI GTCTC 5 cut(s) 412, 881, 1124, 1397, 2051
BsmFI GGGAC 2 cut(s) 511, 1522
BsmI GAATGC 2 cut(s) 1057, 1532
BsnI GGCC 1 cut(s) 2089
Bso31I GGTCTC 1 cut(s) 412
Bsp119I TTCGAA 2 cut(s) 187, 1858
Bsp1286I GDGCHC 5 cut(s) 390, 823, 1298, 1789, 2346
Bsp1720I GCTNAGC 2 cut(s) 384, 405
BspACI CCGC 2 cut(s) 537, 1521
BspANI GGCC 1 cut(s) 2089
BspCNI CTCAG 5 cut(s) 376, 556, 695, 1504, 2209
BspLI GGNNCC 2 cut(s) 499, 2073
BspOI GCTAGC 1 cut(s) 1527
BspPI GGATC 9 cut(s) 56, 269, 328, 547, 659, 702, 1723, 2066, 2079
BspT104I TTCGAA 2 cut(s) 187, 1858
BspTNI GGTCTC 1 cut(s) 412
BsrDI GCAATG 4 cut(s) 987, 1896, 1923, 2002
BsrI ACTGG 1 cut(s) 2048
BssSI CACGAG 1 cut(s) 395
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 1 cut(s) 1011
Bst4CI ACNGT 3 cut(s) 158, 1025, 1135
Bst6I CTCTTC 5 cut(s) 199, 408, 1199, 1395, 1633
BstBI TTCGAA 2 cut(s) 187, 1858
BstC8I GCNNGC 3 cut(s) 402, 1072, 1525
BstF5I GGATG 9 cut(s) 872, 889, 1165, 1549, 1771, 1963, 2103, 2207, 2232
BstMAI GTCTC 5 cut(s) 412, 881, 1124, 1397, 2051
BstMWI GCNNNNNNNGC 4 cut(s) 406, 620, 1422, 1529
BstNI CCWGG 1 cut(s) 1011
BstNSI RCATGY 2 cut(s) 361, 1650
BstSCI CCNGG 2 cut(s) 54, 1009
BstSLI GKGCMC 2 cut(s) 1789, 2346
BstV1I GCAGC 5 cut(s) 1250, 1312, 1640, 1873, 2030
BstX2I RGATCY 5 cut(s) 61, 539, 664, 1728, 2071
BstYI RGATCY 5 cut(s) 61, 539, 664, 1728, 2071
BsuRI GGCC 1 cut(s) 2089
BtsCI GGATG 9 cut(s) 872, 889, 1165, 1549, 1771, 1963, 2103, 2207, 2232
BtsIMutI CAGTG 2 cut(s) 690, 2346
Cac8I GCNNGC 3 cut(s) 402, 1072, 1525
Cfr13I GGNCC 3 cut(s) 498, 2364, 2374
CseI GACGC 1 cut(s) 1829
Csp6I GTAC 4 cut(s) 805, 1014, 1427, 1449
CviQI GTAC 4 cut(s) 805, 1014, 1427, 1449
DraI TTTAAA 1 cut(s) 2395
Eam1104I CTCTTC 5 cut(s) 199, 408, 1199, 1395, 1633
EarI CTCTTC 5 cut(s) 199, 408, 1199, 1395, 1633
EciI GGCGGA 1 cut(s) 552
Eco31I GGTCTC 1 cut(s) 412
Eco47I GGWCC 3 cut(s) 498, 2364, 2374
Eco57I CTGAAG 4 cut(s) 264, 471, 681, 1614
EcoRI GAATTC 2 cut(s) 146, 1269
EcoRII CCWGG 1 cut(s) 1009
FaqI GGGAC 2 cut(s) 511, 1522
FbaI TGATCA 2 cut(s) 967, 1981
FblI GTMKAC 3 cut(s) 5, 1151, 2183
Fnu4HI GCNGC 5 cut(s) 1239, 1326, 1654, 1887, 2044
FokI GGATG 9 cut(s) 879, 896, 1172, 1556, 1778, 1970, 2110, 2214, 2219
Fsp4HI GCNGC 5 cut(s) 1239, 1326, 1654, 1887, 2044
FspBI CTAG 4 cut(s) 305, 1266, 1524, 1964
GluI GCNGC 5 cut(s) 1239, 1326, 1654, 1887, 2044
GsuI CTGGAG 1 cut(s) 636
HaeIII GGCC 1 cut(s) 2089
HapII CCGG 1 cut(s) 55
HgaI GACGC 1 cut(s) 1829
HincII GTYRAC 1 cut(s) 2184
HindII GTYRAC 1 cut(s) 2184
HindIII AAGCTT 3 cut(s) 628, 1275, 1863
HinfI GANTC 6 cut(s) 76, 929, 1083, 1585, 1667, 1967
HpaII CCGG 1 cut(s) 55
HphI GGTGA 4 cut(s) 478, 1013, 1237, 2279
Hpy166II GTNNAC 4 cut(s) 6, 558, 1152, 2184
Hpy188I TCNGA 7 cut(s) 283, 338, 451, 546, 764, 1633, 2026
Hpy188III TCNNGA 7 cut(s) 395, 698, 741, 1537, 1589, 1714, 1776
Hpy8I GTNNAC 4 cut(s) 6, 558, 1152, 2184
Hpy99I CGWCG 1 cut(s) 1845
HpyAV CCTTC 9 cut(s) 19, 38, 248, 288, 1252, 1440, 1894, 2356, 2377
HpyCH4III ACNGT 3 cut(s) 158, 1025, 1135
HpyCH4IV ACGT 1 cut(s) 2386
HpyF10VI GCNNNNNNNGC 4 cut(s) 406, 620, 1422, 1529
HpySE526I ACGT 1 cut(s) 2386
Ksp22I TGATCA 2 cut(s) 967, 1981
LmnI GCTCC 2 cut(s) 826, 2250
Lsp1109I GCAGC 5 cut(s) 1250, 1312, 1640, 1873, 2030
LweI GCATC 6 cut(s) 199, 475, 610, 1363, 1756, 2129
MaeI CTAG 4 cut(s) 305, 1266, 1524, 1964
MaeII ACGT 1 cut(s) 2386
MaeIII GTNAC 5 cut(s) 1019, 1164, 1171, 1183, 1720
MflI RGATCY 5 cut(s) 61, 539, 664, 1728, 2071
MhlI GDGCHC 5 cut(s) 390, 823, 1298, 1789, 2346
MlyI GAGTC 3 cut(s) 938, 1594, 1976
MmeI TCCRAC 1 cut(s) 1736
MnlI CCTC 9 cut(s) 346, 604, 1329, 1437, 1585, 1993, 2220, 2246, 2249
MroXI GAANNNNTTC 2 cut(s) 258, 1103
MslI CAYNNNNRTG 3 cut(s) 17, 378, 1359
MspA1I CMGCKG 1 cut(s) 2361
MspI CCGG 1 cut(s) 55
MspR9I CCNGG 2 cut(s) 56, 1011
Mva1269I GAATGC 2 cut(s) 1057, 1532
MvaI CCWGG 1 cut(s) 1011
MwoI GCNNNNNNNGC 4 cut(s) 406, 620, 1422, 1529
NciI CCSGG 1 cut(s) 56
NheI GCTAGC 1 cut(s) 1523
NlaIV GGNNCC 2 cut(s) 499, 2073
NmuCI GTSAC 2 cut(s) 1019, 1171
NspI RCATGY 2 cut(s) 361, 1650
NspV TTCGAA 2 cut(s) 187, 1858
PciI ACATGT 2 cut(s) 357, 1646
PctI GAATGC 2 cut(s) 1057, 1532
PdmI GAANNNNTTC 2 cut(s) 258, 1103
PfeI GAWTC 3 cut(s) 76, 1083, 1667
PkrI GCNGC 5 cut(s) 1240, 1327, 1655, 1888, 2045
PleI GAGTC 3 cut(s) 937, 1593, 1975
PpsI GAGTC 3 cut(s) 937, 1593, 1975
PscI ACATGT 2 cut(s) 357, 1646
PshBI ATTAAT 1 cut(s) 1946
PsiI TTATAA 1 cut(s) 1497
Psp6I CCWGG 1 cut(s) 1009
PspGI CCWGG 1 cut(s) 1009
PspN4I GGNNCC 2 cut(s) 499, 2073
PspPI GGNCC 3 cut(s) 498, 2364, 2374
PsrI GAACNNNNNNTAC 2 cut(s) 1555, 1587
PsuI RGATCY 5 cut(s) 61, 539, 664, 1728, 2071
PvuII CAGCTG 1 cut(s) 2361
RsaI GTAC 4 cut(s) 806, 1015, 1428, 1450
RsaNI GTAC 4 cut(s) 805, 1014, 1427, 1449
RseI CAYNNNNRTG 3 cut(s) 17, 378, 1359
SalI GTCGAC 1 cut(s) 2182
SatI GCNGC 5 cut(s) 1239, 1326, 1654, 1887, 2044
Sau96I GGNCC 3 cut(s) 498, 2364, 2374
ScaI AGTACT 1 cut(s) 1450
SchI GAGTC 3 cut(s) 938, 1594, 1976
ScrFI CCNGG 2 cut(s) 56, 1011
SduI GDGCHC 5 cut(s) 390, 823, 1298, 1789, 2346
SfaNI GCATC 6 cut(s) 199, 475, 610, 1363, 1756, 2129
SfuI TTCGAA 2 cut(s) 187, 1858
SinI GGWCC 3 cut(s) 498, 2364, 2374
SmiI ATTTAAAT 1 cut(s) 2395
SmiMI CAYNNNNRTG 3 cut(s) 17, 378, 1359
SmlI CTYRAG 1 cut(s) 1387
SmoI CTYRAG 1 cut(s) 1387
SsiI CCGC 2 cut(s) 537, 1521
SspI AATATT 1 cut(s) 2399
SspMI CTAG 4 cut(s) 305, 1266, 1524, 1964
StyD4I CCNGG 2 cut(s) 54, 1009
SwaI ATTTAAAT 1 cut(s) 2395
TaaI ACNGT 3 cut(s) 158, 1025, 1135
TaiI ACGT 1 cut(s) 2389
TaqI TCGA 9 cut(s) 93, 187, 226, 706, 736, 1843, 1858, 2183, 2335
TatI WGTACW 1 cut(s) 1448
TfiI GAWTC 3 cut(s) 76, 1083, 1667
TscAI CASTG 2 cut(s) 690, 2346
TseFI GTSAC 2 cut(s) 1019, 1171
TseI GCWGC 5 cut(s) 1238, 1325, 1653, 1886, 2043
Tsp45I GTSAC 2 cut(s) 1019, 1171
TspRI CASTG 2 cut(s) 690, 2346
VpaK11BI GGWCC 3 cut(s) 498, 2364, 2374
VspI ATTAAT 1 cut(s) 1946
XapI RAATTY 7 cut(s) 146, 715, 1142, 1269, 1346, 1491, 1605
XceI RCATGY 2 cut(s) 361, 1650
XmiI GTMKAC 3 cut(s) 5, 1151, 2183
XmnI GAANNNNTTC 2 cut(s) 258, 1103
XspI CTAG 4 cut(s) 305, 1266, 1524, 1964
ZrmI AGTACT 1 cut(s) 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.