Rh2DG111000

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000165
Physical Location & Seq
Reverse (-)
9062449 .. 9065267
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG111000.1

Sequence Viewer

Length: 1221 bp
ATGGAGTTTGAGCCATTGAGCTTGGGGAATGAGGTTGTTGAATTTGACCTGATGGGTCTTGGTGACATTGACCACCCTGTTGCTGACATTGACATTTTTGACGATTCTCTTGCTGTTGTTGGTTCCAATCCCATTGCCCTACCTTACATTGTCGAAGGAGAGACTAATCTCGAGCCGTATGAGGGGATGGAGTTTGAGTCAGAAGAGGCTGCCAAGGCCTTTTACAACTCCTATGCTCGCCGCACTGGCTTCAGCACTCGGGTCAGCATGTCTCGCCGCTCCAGGCGGGATGGTGCCATCATCCAGAGGTCTTTTGTTTGTGCCAAGGAGGGTTTTCGTATGGATAAGCATGAAAAGCGTGGTCCTGAGTGTGATGGCAGGGTGAAGCGCCCTCGTGCTGAGACTAGAGTTGGTTGTAAGGCAATGTTGGTGGTCAAGATTCAAGACTCTGGGGGATGGGTTGTGTCATGTTTTGTTAAGGAACATAACCATGAGCTGGTTCCCCCGGATAAGGTGCATTGCCTCCGCTCTCATCGTCACGTCTCTGGTTCTGCAAAGTCTTTGGTTGATACCTTGCAGGGTGCTGGCATTGGGCCTAGTGGAATCATGTCCGCCCTCATTAAAGAATATGGTGATATTAGCAAAGTTGGCTTCACGGAGCGTGACTGCAGGAATTACATGAGGAGTAGTCGGCAAAGGACCCTAGGAGGTGACACTCGGCGGTGGACGAGGAATGCCAAGAGTGATGTCATATTGGAGGAACGTGCCAGCAATTTGTTGAATAGGTCGCAAGAATCACTCATGGCACGATACAATAATCTTCGTCATGAGGCACTCAAGTATGTTGATGAAGGTGTTGGAACTGTTGAAATTTATAATGTGGCTATTGCTGCCCTTCAAGAAGCTGCAAAAAAAGTTGCTCTTGAAAACAAGAGTGGCAGGAGGTTGGTCAATGTTAACAAAACTGGCAGAGATGACGATTTGCACTGGGGATGTCAAGCAAATACATTTGGTGATCATATATGGGGCTTGGAAACTCTGTCTCCGGATGACCAGGACAAGAAAATACAGAAACTATCGCGTCAACTTGAGCGTGCACGACGAAAATGTGAAGTGTATCGAACGCATTTGTTTTCGGTTTTGAAAGACATTGAGGAGCAAAAATTACAACTCTCTGTGAAAGTTCAAAACATTAGAATAGAAATGGAAGAGTGTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

406

Amino Acids

45.96

Weight (kDa)

7.16

Isoelectric Point (pI)

54.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 74 - 168 8.3e-32 FAR1 DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 876
AccB1I GGYRCC 1 cut(s) 293
AccB7I CCANNNNNTGG 1 cut(s) 496
AccBSI CCGCTC 2 cut(s) 279, 528
AccII CGCG 1 cut(s) 1081
AccIII TCCGGA 1 cut(s) 1045
AciI CCGC 6 cut(s) 241, 277, 286, 526, 612, 721
AcsI RAATTY 2 cut(s) 41, 870
AcuI CTGAAG 1 cut(s) 235
AfiI CCNNNNNNNGG 3 cut(s) 182, 496, 511
AgsI TTSAA 8 cut(s) 41, 443, 781, 869, 899, 926, 1144, 1187
AjiI CACGTC 1 cut(s) 541
AjnI CCWGG 2 cut(s) 281, 1053
AluBI AGCT 3 cut(s) 21, 496, 905
AluI AGCT 3 cut(s) 21, 496, 905
Alw21I GWGCWC 1 cut(s) 1099
Alw26I GTCTC 5 cut(s) 155, 276, 395, 547, 1047
Alw44I GTGCAC 1 cut(s) 1095
Ama87I CYCGRG 2 cut(s) 170, 258
Aor13HI TCCGGA 1 cut(s) 1045
AoxI GGCC 2 cut(s) 216, 593
ApaLI GTGCAC 1 cut(s) 1095
ApeKI GCWGC 3 cut(s) 209, 890, 905
ApoI RAATTY 2 cut(s) 41, 870
AspA2I CCTAGG 1 cut(s) 703
AspLEI GCGC 1 cut(s) 390
AspS9I GGNCC 3 cut(s) 362, 593, 699
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 5 cut(s) 74, 394, 644, 722, 1025
AvaI CYCGRG 2 cut(s) 170, 258
AvaII GGWCC 2 cut(s) 362, 699
AvrII CCTAGG 1 cut(s) 703
BaeGI GKGCMC 1 cut(s) 1099
BanI GGYRCC 1 cut(s) 293
BauI CACGAG 1 cut(s) 393
Bbv12I GWGCWC 1 cut(s) 1099
BbvI GCAGC 3 cut(s) 196, 877, 892
BccI CCATC 6 cut(s) 46, 181, 284, 305, 368, 450
BceAI ACGGC 1 cut(s) 160
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciT130I CCWGG 2 cut(s) 283, 1055
BclI TGATCA 1 cut(s) 1015
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 5 cut(s) 155, 276, 395, 547, 1047
BfaI CTAG 3 cut(s) 405, 597, 704
BfmI CTRYAG 1 cut(s) 667
BfoI RGCGCY 1 cut(s) 391
BglI GCCNNNNNGGC 1 cut(s) 246
BisI GCNGC 5 cut(s) 210, 241, 277, 891, 906
BlnI CCTAGG 1 cut(s) 703
BlsI GCNGC 5 cut(s) 211, 242, 278, 892, 907
Bme1390I CCNGG 3 cut(s) 283, 506, 1055
Bme18I GGWCC 2 cut(s) 362, 699
BmeT110I CYCGRG 2 cut(s) 170, 258
BmgBI CACGTC 1 cut(s) 541
BmgT120I GGNCC 3 cut(s) 362, 593, 699
BmiI GGNNCC 4 cut(s) 124, 295, 501, 701
BmrFI CCNGG 3 cut(s) 283, 506, 1055
BmrI ACTGGG 1 cut(s) 997
BmuI ACTGGG 1 cut(s) 997
BpmI CTGGAG 1 cut(s) 265
BpuEI CTTGAG 2 cut(s) 821, 1109
BpuMI CCSGG 1 cut(s) 506
BsaJI CCNNGG 4 cut(s) 213, 324, 504, 703
BsaWI WCCGGW 1 cut(s) 1045
BsaXI ACNNNNNCTCC 4 cut(s) 182, 212, 1027, 1057
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 496, 511
Bse1I ACTGG 3 cut(s) 250, 970, 992
Bse3DI GCAATG 3 cut(s) 132, 429, 517
BseAI TCCGGA 1 cut(s) 1045
BseBI CCWGG 2 cut(s) 283, 1055
BseDI CCNNGG 4 cut(s) 213, 324, 504, 703
BseGI GGATG 6 cut(s) 192, 295, 300, 461, 998, 1054
BseLI CCNNNNNNNGG 3 cut(s) 182, 496, 511
BseMI GCAATG 3 cut(s) 132, 429, 517
BseMII CTCAG 2 cut(s) 357, 390
BseNI ACTGG 3 cut(s) 250, 970, 992
BseRI GAGGAG 2 cut(s) 697, 1169
BseSI GKGCMC 1 cut(s) 1099
BseXI GCAGC 3 cut(s) 196, 877, 892
Bsh1236I CGCG 1 cut(s) 1081
BshFI GGCC 2 cut(s) 218, 595
BshNI GGYRCC 1 cut(s) 293
BsiHKAI GWGCWC 1 cut(s) 1099
BsiHKCI CYCGRG 2 cut(s) 170, 258
BsiSI CCGG 2 cut(s) 506, 1046
BslI CCNNNNNNNGG 3 cut(s) 182, 496, 511
BsmAI GTCTC 5 cut(s) 155, 276, 395, 547, 1047
BsmBI CGTCTC 1 cut(s) 547
BsmI GAATGC 1 cut(s) 739
BsnI GGCC 2 cut(s) 218, 595
BsoBI CYCGRG 2 cut(s) 170, 258
Bsp1286I GDGCHC 1 cut(s) 1099
Bsp13I TCCGGA 1 cut(s) 1045
Bsp143I GATC 1 cut(s) 1015
BspACI CCGC 6 cut(s) 241, 277, 286, 526, 612, 721
BspANI GGCC 2 cut(s) 218, 595
BspCNI CTCAG 2 cut(s) 358, 391
BspEI TCCGGA 1 cut(s) 1045
BspFNI CGCG 1 cut(s) 1081
BspHI TCATGA 1 cut(s) 826
BspLI GGNNCC 4 cut(s) 124, 295, 501, 701
BspMAI CTGCAG 1 cut(s) 671
BspT107I GGYRCC 1 cut(s) 293
BsrBI CCGCTC 2 cut(s) 279, 528
BsrDI GCAATG 3 cut(s) 132, 429, 517
BsrI ACTGG 3 cut(s) 250, 970, 992
BssECI CCNNGG 4 cut(s) 213, 324, 504, 703
BssMI GATC 1 cut(s) 1015
BssSI CACGAG 1 cut(s) 393
BssT1I CCWWGG 3 cut(s) 213, 324, 703
Bst2BI CACGAG 1 cut(s) 393
Bst2UI CCWGG 2 cut(s) 283, 1055
Bst4CI ACNGT 1 cut(s) 865
Bst6I CTCTTC 2 cut(s) 198, 1203
BstC8I GCNNGC 4 cut(s) 238, 586, 769, 1095
BstDEI CTNAG 2 cut(s) 366, 399
BstF5I GGATG 6 cut(s) 192, 295, 300, 461, 998, 1054
BstFNI CGCG 1 cut(s) 1081
BstH2I RGCGCY 1 cut(s) 391
BstHHI GCGC 1 cut(s) 390
BstKTI GATC 1 cut(s) 1018
BstMAI GTCTC 5 cut(s) 155, 276, 395, 547, 1047
BstMBI GATC 1 cut(s) 1015
BstMWI GCNNNNNNNGC 6 cut(s) 215, 246, 273, 355, 648, 890
BstNI CCWGG 2 cut(s) 283, 1055
BstNSI RCATGY 1 cut(s) 271
BstSCI CCNGG 3 cut(s) 281, 504, 1053
BstSFI CTRYAG 1 cut(s) 667
BstSLI GKGCMC 1 cut(s) 1099
BstUI CGCG 1 cut(s) 1081
BstV1I GCAGC 3 cut(s) 196, 877, 892
BsuRI GGCC 2 cut(s) 218, 595
BtrI CACGTC 1 cut(s) 541
BtsCI GGATG 6 cut(s) 192, 295, 300, 461, 998, 1054
BtsIMutI CAGTG 2 cut(s) 243, 985
Cac8I GCNNGC 4 cut(s) 238, 586, 769, 1095
CciI TCATGA 1 cut(s) 826
CfoI GCGC 1 cut(s) 390
Cfr13I GGNCC 3 cut(s) 362, 593, 699
CseI GACGC 1 cut(s) 1070
CspCI CAANNNNNGTGG 2 cut(s) 411, 446
CviAII CATG 8 cut(s) 268, 350, 468, 491, 607, 679, 802, 827
DdeI CTNAG 2 cut(s) 366, 399
DpnI GATC 1 cut(s) 1017
DpnII GATC 1 cut(s) 1015
Eam1104I CTCTTC 2 cut(s) 198, 1203
EarI CTCTTC 2 cut(s) 198, 1203
EciI GGCGGA 1 cut(s) 601
Eco130I CCWWGG 3 cut(s) 213, 324, 703
Eco147I AGGCCT 1 cut(s) 218
Eco47I GGWCC 2 cut(s) 362, 699
Eco57I CTGAAG 1 cut(s) 235
Eco88I CYCGRG 2 cut(s) 170, 258
EcoO109I RGGNCCY 1 cut(s) 699
EcoRII CCWGG 2 cut(s) 281, 1053
EcoT14I CCWWGG 3 cut(s) 213, 324, 703
ErhI CCWWGG 3 cut(s) 213, 324, 703
Esp3I CGTCTC 1 cut(s) 547
FaeI CATG 8 cut(s) 271, 353, 471, 494, 610, 682, 805, 830
FalI AAGNNNNNCTT 2 cut(s) 906, 938
FatI CATG 8 cut(s) 267, 349, 467, 490, 606, 678, 801, 826
FauI CCCGC 1 cut(s) 279
FbaI TGATCA 1 cut(s) 1015
Fnu4HI GCNGC 5 cut(s) 210, 241, 277, 891, 906
FokI GGATG 6 cut(s) 199, 287, 302, 468, 1005, 1061
Fsp4HI GCNGC 5 cut(s) 210, 241, 277, 891, 906
FspBI CTAG 3 cut(s) 405, 597, 704
GlaI GCGC 1 cut(s) 389
GluI GCNGC 5 cut(s) 210, 241, 277, 891, 906
GsuI CTGGAG 1 cut(s) 265
HaeII RGCGCY 1 cut(s) 391
HaeIII GGCC 2 cut(s) 218, 595
HapII CCGG 2 cut(s) 506, 1046
HgaI GACGC 1 cut(s) 1070
HhaI GCGC 1 cut(s) 390
Hin1II CATG 8 cut(s) 271, 353, 471, 494, 610, 682, 805, 830
Hin6I GCGC 1 cut(s) 388
HinP1I GCGC 1 cut(s) 388
HincII GTYRAC 2 cut(s) 958, 1085
HindII GTYRAC 2 cut(s) 958, 1085
HinfI GANTC 6 cut(s) 104, 197, 439, 446, 603, 794
HpaI GTTAAC 1 cut(s) 958
HpaII CCGG 2 cut(s) 506, 1046
HphI GGTGA 5 cut(s) 74, 394, 644, 722, 1025
Hpy166II GTNNAC 4 cut(s) 726, 958, 1085, 1097
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 9 cut(s) 170, 304, 365, 436, 443, 827, 899, 923, 1046
Hpy8I GTNNAC 4 cut(s) 726, 958, 1085, 1097
Hpy99I CGWCG 1 cut(s) 1104
HpyAV CCTTC 3 cut(s) 149, 845, 905
HpyCH4III ACNGT 1 cut(s) 865
HpyCH4IV ACGT 2 cut(s) 540, 763
HpyCH4V TGCA 7 cut(s) 517, 554, 577, 669, 908, 985, 1097
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 246, 273, 355, 648, 890
HpyF3I CTNAG 2 cut(s) 366, 399
HpySE526I ACGT 2 cut(s) 540, 763
Hsp92II CATG 8 cut(s) 271, 353, 471, 494, 610, 682, 805, 830
HspAI GCGC 1 cut(s) 388
Kpn2I TCCGGA 1 cut(s) 1045
Ksp22I TGATCA 1 cut(s) 1015
KspAI GTTAAC 1 cut(s) 958
Kzo9I GATC 1 cut(s) 1015
LmnI GCTCC 3 cut(s) 284, 658, 1156
Lsp1109I GCAGC 3 cut(s) 196, 877, 892
MaeI CTAG 3 cut(s) 405, 597, 704
MaeII ACGT 2 cut(s) 540, 763
MaeIII GTNAC 4 cut(s) 62, 536, 662, 710
MalI GATC 1 cut(s) 1017
MbiI CCGCTC 2 cut(s) 279, 528
MboI GATC 1 cut(s) 1015
MboII GAAGA 3 cut(s) 215, 812, 1220
MhlI GDGCHC 1 cut(s) 1099
MluCI AATT 6 cut(s) 41, 673, 772, 870, 1163, 1216
MlyI GAGTC 2 cut(s) 206, 440
MmeI TCCRAC 1 cut(s) 838
MroI TCCGGA 1 cut(s) 1045
MseI TTAA 3 cut(s) 477, 621, 957
MslI CAYNNNNRTG 1 cut(s) 489
MspI CCGG 2 cut(s) 506, 1046
MspR9I CCNGG 3 cut(s) 283, 506, 1055
Mva1269I GAATGC 1 cut(s) 739
MvaI CCWGG 2 cut(s) 283, 1055
MvnI CGCG 1 cut(s) 1081
MwoI GCNNNNNNNGC 6 cut(s) 215, 246, 273, 355, 648, 890
NciI CCSGG 1 cut(s) 506
NdeII GATC 1 cut(s) 1015
NlaIII CATG 8 cut(s) 271, 353, 471, 494, 610, 682, 805, 830
NlaIV GGNNCC 4 cut(s) 124, 295, 501, 701
NmeAIII GCCGAG 1 cut(s) 697
NmuCI GTSAC 4 cut(s) 62, 536, 662, 710
NspI RCATGY 1 cut(s) 271
PaeR7I CTCGAG 1 cut(s) 170
PagI TCATGA 1 cut(s) 826
PceI AGGCCT 1 cut(s) 218
PctI GAATGC 1 cut(s) 739
PfeI GAWTC 4 cut(s) 104, 439, 603, 794
PflMI CCANNNNNTGG 1 cut(s) 496
PkrI GCNGC 5 cut(s) 211, 242, 278, 892, 907
PleI GAGTC 2 cut(s) 205, 440
PpsI GAGTC 2 cut(s) 205, 440
PpuMI RGGWCCY 1 cut(s) 699
PsiI TTATAA 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 699
Psp6I CCWGG 2 cut(s) 281, 1053
PspGI CCWGG 2 cut(s) 281, 1053
PspN4I GGNNCC 4 cut(s) 124, 295, 501, 701
PspPI GGNCC 3 cut(s) 362, 593, 699
PspPPI RGGWCCY 1 cut(s) 699
PstI CTGCAG 1 cut(s) 671
RseI CAYNNNNRTG 1 cut(s) 489
SaqAI TTAA 3 cut(s) 477, 621, 957
SatI GCNGC 5 cut(s) 210, 241, 277, 891, 906
Sau3AI GATC 1 cut(s) 1015
Sau96I GGNCC 3 cut(s) 362, 593, 699
SchI GAGTC 2 cut(s) 206, 440
ScrFI CCNGG 3 cut(s) 283, 506, 1055
SduI GDGCHC 1 cut(s) 1099
SfcI CTRYAG 1 cut(s) 667
Sfr274I CTCGAG 1 cut(s) 170
SinI GGWCC 2 cut(s) 362, 699
SlaI CTCGAG 1 cut(s) 170
SmiMI CAYNNNNRTG 1 cut(s) 489
SmlI CTYRAG 3 cut(s) 170, 836, 1088
SmoI CTYRAG 3 cut(s) 170, 836, 1088
Sse9I AATT 6 cut(s) 41, 673, 772, 870, 1163, 1216
SseBI AGGCCT 1 cut(s) 218
SsiI CCGC 6 cut(s) 241, 277, 286, 526, 612, 721
SspMI CTAG 3 cut(s) 405, 597, 704
StuI AGGCCT 1 cut(s) 218
StyD4I CCNGG 3 cut(s) 281, 504, 1053
StyI CCWWGG 3 cut(s) 213, 324, 703
TaaI ACNGT 1 cut(s) 865
TaiI ACGT 2 cut(s) 543, 766
TaqI TCGA 3 cut(s) 153, 171, 1120
TasI AATT 6 cut(s) 41, 673, 772, 870, 1163, 1216
TauI GCSGC 2 cut(s) 243, 279
TfiI GAWTC 4 cut(s) 104, 439, 603, 794
Tru1I TTAA 3 cut(s) 477, 621, 957
Tru9I TTAA 3 cut(s) 477, 621, 957
TscAI CASTG 2 cut(s) 250, 992
TseFI GTSAC 4 cut(s) 62, 536, 662, 710
TseI GCWGC 3 cut(s) 209, 890, 905
Tsp45I GTSAC 4 cut(s) 62, 536, 662, 710
TspDTI ATGAA 2 cut(s) 366, 864
TspGWI ACGGA 1 cut(s) 671
TspRI CASTG 2 cut(s) 250, 992
Van91I CCANNNNNTGG 1 cut(s) 496
VneI GTGCAC 1 cut(s) 1095
VpaK11BI GGWCC 2 cut(s) 362, 699
XapI RAATTY 2 cut(s) 41, 870
XceI RCATGY 1 cut(s) 271
XhoI CTCGAG 1 cut(s) 170
XmaJI CCTAGG 1 cut(s) 703
XspI CTAG 3 cut(s) 405, 597, 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.