Rw7G026010

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000165
Physical Location & Seq
Reverse (-)
32886600 .. 32890200
3601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G026010.1

Sequence Viewer

Length: 1590 bp
ATGGACTATAAGCCTCTGACCATTGGGAACGATGTGGTTGAATTTGACCTTGGTGGTTCTGGGGAAGATGACACCATTGCCCTGGACTTAGAACACCCAGATGATGGCTATGATCTTTTTGAAGAAGACGATTTAGTCCAACTTGCCTCTAGTTCCACTAGGTTTGGTGATGATTTGGGTAATGGGGACCCCAATCTTGAACCTTATGAGGGGATGGAATTCGATTCCGAACAGGCCTCTCGCATTTTCTACAATTCTTATGCAAGGAGAGTTGGTTTTAGTACCCGGGTAAGTGTGTACCAGCGTTCACGCCGTGATGGCTCCATCATATGCCGGCAGATTGTGTGTTCCCGGGAAGGGTTTCGGCGTGATGGAGGTGAAAATAGGTCTAAAAGGCAGCGGACAATCACTAGAGTTGGCTGCAAGGCACAGATGACTGTGAAGAAACAGAGTTCAGGAAGATGGGCTGTTTCGAAATTAGTGAAGGAACATAACCATGAGCTTGTACCGCCGGATAAGGTGCATTGTCTCCGTTCGCATAGGCATGTCTCTGGTCCTGCTCGGAGTCTGATTGATACCCTTCAAGCGGCCGGGATGGGTCCCAGTGGGGTGATGTCTGTGCTCATCAAGGAATCAGGGGGAATTAATAATGTTGGCTTCACGAAAGTTGATTGCCAGAATTACATGAGCAGTAGCAGGCAGAGAACTCTTGGGAGTGGGGGTCAGCTTGTTTTTGACTATTTGAAGCGAATGCAGGATGAGGATCCTGGTTTCTTTTGTGCCGTCCAGGGTGATTTTGAGAACTCAACAGGTAACATATTCTGGGCTGATTCAAATTCAAGAATGAACTATAGTTACTTTGGAGACACTGTTACATTTGACACAACATATAGAACAAATCGATACCGGGTTCCATTTGCTCCATTTACTGGGTGGAATCATCATGGACAGCCGGTGTTATTTGGATGTGCATTACTCCTTAATGAGTCAGAGTCCTCGTTTGTTTGGCTATTCCAGACTTGGTTAGCTGCTATGTCTGGCTGCCAACCTGTCTCAATCACAACAGACCAGGATAGAATCATCAGGGCTGCTGTTGTGCAAGTATTTCCTGGAACCCGCCACCGCTTTTGCAAATGGAATGTGTTCAGGGAAGCTCAGGAGAAGTTGTCCCACATTTATCAGTCACACCCGACCTTTGAAGCCGAGTTCCTGAGGTGCATTAATGTGACAGAGACGATTGATGAATTTGAGATATGTTGGGAGTCCCTTCTTAAAATGTATGATCTTGATAGTAATGAATGGCTTCAGTCAATGTACCATGCTCGCCAGCAATGGGTGCCAGTTTTCCTTCGTGATACATTTTTTGGGGAGATGTTTGTAACCCAAGGAAGTGATAATATAAACTCATACTTTGATGGCTATATAAATGCATCCACGAATATTCAGGTGCTGATAAAGCAGTATGAAAAAGCAATTGCCACTCGCCATGAAAAGGAAGTAAAGGCTGATTATGATACATTGAACATCTCTCCAATTCTAAGGACTCCATCTCCATGGAAAAGCAAGCTGCAAAACTTTATACGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

529

Amino Acids

60.44

Weight (kDa)

5.78

Isoelectric Point (pI)

51.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 83 - 170 3.1e-31 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 252 - 373 1.8e-06 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 291 - 382 2e-28 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 134
AccB1I GGYRCC 1 cut(s) 1336
AccB7I CCANNNNNTGG 2 cut(s) 104, 929
AciI CCGC 5 cut(s) 400, 509, 587, 1117, 1123
AclWI GGATC 2 cut(s) 758, 771
AcoI YGGCCR 1 cut(s) 588
AcsI RAATTY 4 cut(s) 41, 218, 835, 1244
AcuI CTGAAG 1 cut(s) 1289
AdeI CACNNNGTG 1 cut(s) 314
AfaI GTAC 4 cut(s) 283, 299, 507, 1316
AfiI CCNNNNNNNGG 7 cut(s) 104, 209, 357, 586, 929, 1333, 1492
AgsI TTSAA 9 cut(s) 41, 122, 200, 584, 745, 834, 840, 1199, 1522
AjnI CCWGG 5 cut(s) 81, 766, 786, 1068, 1108
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AluBI AGCT 5 cut(s) 502, 727, 1028, 1154, 1567
AluI AGCT 5 cut(s) 502, 727, 1028, 1154, 1567
Alw21I GWGCWC 1 cut(s) 624
Alw26I GTCTC 5 cut(s) 533, 553, 858, 1057, 1226
AlwI GGATC 2 cut(s) 758, 771
AlwNI CAGNNNCTG 1 cut(s) 1450
Ama87I CYCGRG 2 cut(s) 285, 351
AoxI GGCC 2 cut(s) 234, 588
ApeKI GCWGC 6 cut(s) 397, 420, 1028, 1041, 1088, 1567
ApoI RAATTY 4 cut(s) 41, 218, 835, 1244
AseI ATTAAT 2 cut(s) 645, 1221
Asp700I GAANNNNTTC 3 cut(s) 360, 1142, 1302
AspS9I GGNCC 3 cut(s) 187, 554, 599
AsuC2I CCSGG 6 cut(s) 286, 287, 352, 353, 592, 908
AsuHPI GGTGA 4 cut(s) 179, 389, 622, 803
AsuII TTCGAA 1 cut(s) 473
AvaI CYCGRG 2 cut(s) 285, 351
AvaII GGWCC 3 cut(s) 187, 554, 599
AxyI CCTNAGG 1 cut(s) 1211
BamHI GGATCC 1 cut(s) 763
BanI GGYRCC 1 cut(s) 1336
BbsI GAAGAC 1 cut(s) 132
Bbv12I GWGCWC 1 cut(s) 624
BbvI GCAGC 6 cut(s) 407, 409, 1015, 1028, 1075, 1554
BccI CCATC 9 cut(s) 98, 208, 311, 332, 365, 456, 589, 1409, 1555
BceAI ACGGC 2 cut(s) 297, 767
BciT130I CCWGG 5 cut(s) 83, 768, 788, 1070, 1110
BcnI CCSGG 6 cut(s) 286, 287, 352, 353, 592, 908
BcoDI GTCTC 5 cut(s) 533, 553, 858, 1057, 1226
BfaI CTAG 3 cut(s) 150, 159, 411
BfmI CTRYAG 1 cut(s) 850
BglI GCCNNNNNGGC 1 cut(s) 318
BisI GCNGC 7 cut(s) 398, 421, 588, 1029, 1042, 1089, 1568
BlsI GCNGC 7 cut(s) 399, 422, 589, 1030, 1043, 1090, 1569
Bme18I GGWCC 3 cut(s) 187, 554, 599
BmeT110I CYCGRG 2 cut(s) 285, 351
BmgT120I GGNCC 3 cut(s) 187, 554, 599
BmiI GGNNCC 9 cut(s) 188, 189, 322, 600, 601, 765, 912, 1114, 1338
BmrI ACTGGG 2 cut(s) 597, 939
BmsI GCATC 1 cut(s) 1439
BmuI ACTGGG 2 cut(s) 597, 939
BpiI GAAGAC 1 cut(s) 132
Bpu10I CCTNAGC 1 cut(s) 1155
Bpu14I TTCGAA 1 cut(s) 473
BpuMI CCSGG 6 cut(s) 286, 287, 352, 353, 592, 908
Bsa29I ATCGAT 1 cut(s) 901
BsaBI GATNNNNATC 1 cut(s) 762
BsaJI CCNNGG 7 cut(s) 49, 81, 285, 351, 787, 1384, 1553
Bsc4I CCNNNNNNNGG 7 cut(s) 104, 209, 357, 586, 929, 1333, 1492
Bse118I RCCGGY 2 cut(s) 333, 952
Bse1I ACTGG 3 cut(s) 603, 934, 1340
Bse21I CCTNAGG 1 cut(s) 1211
Bse3DI GCAATG 2 cut(s) 75, 1337
Bse8I GATNNNNATC 1 cut(s) 762
BseBI CCWGG 5 cut(s) 83, 768, 788, 1070, 1110
BseCI ATCGAT 1 cut(s) 901
BseDI CCNNGG 7 cut(s) 49, 81, 285, 351, 787, 1384, 1553
BseGI GGATG 5 cut(s) 219, 600, 763, 971, 1430
BseJI GATNNNNATC 1 cut(s) 762
BseLI CCNNNNNNNGG 7 cut(s) 104, 209, 357, 586, 929, 1333, 1492
BseMI GCAATG 2 cut(s) 75, 1337
BseMII CTCAG 2 cut(s) 1169, 1202
BseNI ACTGG 3 cut(s) 603, 934, 1340
BseX3I CGGCCG 1 cut(s) 588
BseXI GCAGC 6 cut(s) 407, 409, 1015, 1028, 1075, 1554
Bsh1285I CGRYCG 1 cut(s) 591
BshFI GGCC 2 cut(s) 236, 590
BshNI GGYRCC 1 cut(s) 1336
BshVI ATCGAT 1 cut(s) 901
BsiEI CGRYCG 1 cut(s) 591
BsiHKAI GWGCWC 1 cut(s) 624
BsiHKCI CYCGRG 2 cut(s) 285, 351
BsiSI CCGG 7 cut(s) 286, 334, 352, 512, 591, 907, 953
BslFI GGGAC 4 cut(s) 200, 585, 1153, 1249
BslI CCNNNNNNNGG 7 cut(s) 104, 209, 357, 586, 929, 1333, 1492
BsmAI GTCTC 5 cut(s) 533, 553, 858, 1057, 1226
BsmBI CGTCTC 1 cut(s) 1226
BsmFI GGGAC 4 cut(s) 200, 585, 1153, 1249
BsmI GAATGC 1 cut(s) 756
BsnI GGCC 2 cut(s) 236, 590
BsoBI CYCGRG 2 cut(s) 285, 351
Bsp119I TTCGAA 1 cut(s) 473
Bsp1286I GDGCHC 1 cut(s) 624
Bsp143I GATC 3 cut(s) 112, 763, 1282
Bsp19I CCATGG 1 cut(s) 1553
BspACI CCGC 5 cut(s) 400, 509, 587, 1117, 1123
BspANI GGCC 2 cut(s) 236, 590
BspCNI CTCAG 2 cut(s) 1168, 1203
BspDI ATCGAT 1 cut(s) 901
BspLI GGNNCC 9 cut(s) 188, 189, 322, 600, 601, 765, 912, 1114, 1338
BspPI GGATC 2 cut(s) 758, 771
BspT104I TTCGAA 1 cut(s) 473
BspT107I GGYRCC 1 cut(s) 1336
BsrDI GCAATG 2 cut(s) 75, 1337
BsrFI RCCGGY 2 cut(s) 333, 952
BsrI ACTGG 3 cut(s) 603, 934, 1340
BssAI RCCGGY 2 cut(s) 333, 952
BssECI CCNNGG 7 cut(s) 49, 81, 285, 351, 787, 1384, 1553
BssMI GATC 3 cut(s) 112, 763, 1282
BssT1I CCWWGG 3 cut(s) 49, 1384, 1553
Bst2UI CCWGG 5 cut(s) 83, 768, 788, 1070, 1110
Bst4CI ACNGT 2 cut(s) 439, 871
BstAPI GCANNNNNTGC 1 cut(s) 1336
BstBI TTCGAA 1 cut(s) 473
BstC8I GCNNGC 5 cut(s) 335, 698, 1324, 1328, 1565
BstDEI CTNAG 4 cut(s) 88, 1155, 1211, 1538
BstDSI CCRYGG 1 cut(s) 1553
BstF5I GGATG 5 cut(s) 219, 600, 763, 971, 1430
BstKTI GATC 3 cut(s) 115, 766, 1285
BstMAI GTCTC 5 cut(s) 533, 553, 858, 1057, 1226
BstMBI GATC 3 cut(s) 112, 763, 1282
BstMCI CGRYCG 1 cut(s) 591
BstMWI GCNNNNNNNGC 4 cut(s) 318, 508, 1336, 1456
BstNI CCWGG 5 cut(s) 83, 768, 788, 1070, 1110
BstNSI RCATGY 1 cut(s) 548
BstSFI CTRYAG 1 cut(s) 850
BstV1I GCAGC 6 cut(s) 407, 409, 1015, 1028, 1075, 1554
BstV2I GAAGAC 1 cut(s) 132
BstX2I RGATCY 1 cut(s) 763
BstXI CCANNNNNNTGG 2 cut(s) 82, 1554
BstYI RGATCY 1 cut(s) 763
BstZI CGGCCG 1 cut(s) 588
Bsu15I ATCGAT 1 cut(s) 901
Bsu36I CCTNAGG 1 cut(s) 1211
BsuRI GGCC 2 cut(s) 236, 590
BsuTUI ATCGAT 1 cut(s) 901
BtgI CCRYGG 1 cut(s) 1553
BtsCI GGATG 5 cut(s) 219, 600, 763, 971, 1430
BtsIMutI CAGTG 2 cut(s) 610, 867
Cac8I GCNNGC 5 cut(s) 335, 698, 1324, 1328, 1565
CaiI CAGNNNCTG 1 cut(s) 1450
Cfr10I RCCGGY 2 cut(s) 333, 952
Cfr13I GGNCC 3 cut(s) 187, 554, 599
Cfr9I CCCGGG 2 cut(s) 285, 351
ClaI ATCGAT 1 cut(s) 901
Csp6I GTAC 4 cut(s) 282, 298, 506, 1315
CspCI CAANNNNNGTGG 4 cut(s) 145, 180, 1109, 1144
CviAII CATG 7 cut(s) 497, 545, 685, 944, 1319, 1487, 1554
CviQI GTAC 4 cut(s) 282, 298, 506, 1315
DdeI CTNAG 4 cut(s) 88, 1155, 1211, 1538
DpnI GATC 3 cut(s) 114, 765, 1284
DpnII GATC 3 cut(s) 112, 763, 1282
DraIII CACNNNGTG 1 cut(s) 314
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 1 cut(s) 588
EagI CGGCCG 1 cut(s) 588
EclXI CGGCCG 1 cut(s) 588
Eco130I CCWWGG 3 cut(s) 49, 1384, 1553
Eco147I AGGCCT 1 cut(s) 236
Eco47I GGWCC 3 cut(s) 187, 554, 599
Eco52I CGGCCG 1 cut(s) 588
Eco57I CTGAAG 1 cut(s) 1289
Eco81I CCTNAGG 1 cut(s) 1211
Eco88I CYCGRG 2 cut(s) 285, 351
EcoO109I RGGNCCY 2 cut(s) 187, 599
EcoRI GAATTC 1 cut(s) 218
EcoRII CCWGG 5 cut(s) 81, 766, 786, 1068, 1108
EcoT14I CCWWGG 3 cut(s) 49, 1384, 1553
EcoT22I ATGCAT 1 cut(s) 1432
ErhI CCWWGG 3 cut(s) 49, 1384, 1553
Esp3I CGTCTC 1 cut(s) 1226
FaeI CATG 7 cut(s) 500, 548, 688, 947, 1322, 1490, 1557
FaqI GGGAC 4 cut(s) 200, 585, 1153, 1249
FatI CATG 7 cut(s) 496, 544, 684, 943, 1318, 1486, 1553
FauI CCCGC 1 cut(s) 1124
FauNDI CATATG 1 cut(s) 329
Fnu4HI GCNGC 7 cut(s) 398, 421, 588, 1029, 1042, 1089, 1568
FokI GGATG 5 cut(s) 226, 607, 770, 978, 1417
Fsp4HI GCNGC 7 cut(s) 398, 421, 588, 1029, 1042, 1089, 1568
FspBI CTAG 3 cut(s) 150, 159, 411
GluI GCNGC 7 cut(s) 398, 421, 588, 1029, 1042, 1089, 1568
HaeIII GGCC 2 cut(s) 236, 590
HapII CCGG 7 cut(s) 286, 334, 352, 512, 591, 907, 953
Hin1II CATG 7 cut(s) 500, 548, 688, 947, 1322, 1490, 1557
HpaII CCGG 7 cut(s) 286, 334, 352, 512, 591, 907, 953
HphI GGTGA 4 cut(s) 179, 389, 622, 803
Hpy166II GTNNAC 2 cut(s) 298, 308
Hpy188I TCNGA 5 cut(s) 18, 229, 564, 570, 991
Hpy188III TCNNGA 9 cut(s) 197, 456, 661, 840, 1015, 1157, 1210, 1286, 1352
Hpy8I GTNNAC 2 cut(s) 298, 308
HpyAV CCTTC 5 cut(s) 350, 478, 590, 1277, 1358
HpyCH4III ACNGT 2 cut(s) 439, 871
HpyF10VI GCNNNNNNNGC 4 cut(s) 318, 508, 1336, 1456
HpyF3I CTNAG 4 cut(s) 88, 1155, 1211, 1538
Hsp92II CATG 7 cut(s) 500, 548, 688, 947, 1322, 1490, 1557
KflI GGGWCCC 2 cut(s) 187, 599
KroI GCCGGC 1 cut(s) 333
KroNI GCCGGC 1 cut(s) 335
Kzo9I GATC 3 cut(s) 112, 763, 1282
LmnI GCTCC 2 cut(s) 326, 925
Lsp1109I GCAGC 6 cut(s) 407, 409, 1015, 1028, 1075, 1554
LweI GCATC 1 cut(s) 1439
MaeI CTAG 3 cut(s) 150, 159, 411
MaeIII GTNAC 6 cut(s) 812, 854, 871, 1182, 1225, 1378
MalI GATC 3 cut(s) 114, 765, 1284
MboI GATC 3 cut(s) 112, 763, 1282
MboII GAAGA 5 cut(s) 77, 134, 137, 454, 471
MfeI CAATTG 1 cut(s) 1473
MflI RGATCY 1 cut(s) 763
MhlI GDGCHC 1 cut(s) 624
MlyI GAGTC 5 cut(s) 574, 995, 1001, 1271, 1537
MmeI TCCRAC 1 cut(s) 163
MnlI CCTC 9 cut(s) 24, 157, 202, 247, 368, 754, 1006, 1206, 1577
Mph1103I ATGCAT 1 cut(s) 1432
MroNI GCCGGC 1 cut(s) 333
MroXI GAANNNNTTC 3 cut(s) 360, 1142, 1302
MseI TTAA 4 cut(s) 645, 981, 1221, 1272
MslI CAYNNNNRTG 5 cut(s) 99, 495, 543, 1223, 1552
MspA1I CMGCKG 1 cut(s) 400
MspI CCGG 7 cut(s) 286, 334, 352, 512, 591, 907, 953
MunI CAATTG 1 cut(s) 1473
Mva1269I GAATGC 1 cut(s) 756
MvaI CCWGG 5 cut(s) 83, 768, 788, 1070, 1110
MwoI GCNNNNNNNGC 4 cut(s) 318, 508, 1336, 1456
NaeI GCCGGC 1 cut(s) 335
NciI CCSGG 6 cut(s) 286, 287, 352, 353, 592, 908
NcoI CCATGG 1 cut(s) 1553
NdeI CATATG 1 cut(s) 329
NdeII GATC 3 cut(s) 112, 763, 1282
NgoMIV GCCGGC 1 cut(s) 333
NlaIII CATG 7 cut(s) 500, 548, 688, 947, 1322, 1490, 1557
NlaIV GGNNCC 9 cut(s) 188, 189, 322, 600, 601, 765, 912, 1114, 1338
NmeAIII GCCGAG 1 cut(s) 1228
NmuCI GTSAC 2 cut(s) 1182, 1225
NsiI ATGCAT 1 cut(s) 1432
NspI RCATGY 1 cut(s) 548
NspV TTCGAA 1 cut(s) 473
PceI AGGCCT 1 cut(s) 236
PctI GAATGC 1 cut(s) 756
PdiI GCCGGC 1 cut(s) 335
PdmI GAANNNNTTC 3 cut(s) 360, 1142, 1302
PfeI GAWTC 5 cut(s) 224, 632, 830, 937, 1077
PflMI CCANNNNNTGG 2 cut(s) 104, 929
PfoI TCCNGGA 1 cut(s) 1108
PkrI GCNGC 7 cut(s) 399, 422, 589, 1030, 1043, 1090, 1569
PleI GAGTC 5 cut(s) 573, 994, 1000, 1270, 1537
PpsI GAGTC 5 cut(s) 573, 994, 1000, 1270, 1537
PpuMI RGGWCCY 2 cut(s) 187, 599
PshBI ATTAAT 2 cut(s) 645, 1221
Psp5II RGGWCCY 2 cut(s) 187, 599
Psp6I CCWGG 5 cut(s) 81, 766, 786, 1068, 1108
PspGI CCWGG 5 cut(s) 81, 766, 786, 1068, 1108
PspN4I GGNNCC 9 cut(s) 188, 189, 322, 600, 601, 765, 912, 1114, 1338
PspPI GGNCC 3 cut(s) 187, 554, 599
PspPPI RGGWCCY 2 cut(s) 187, 599
PsrI GAACNNNNNNTAC 2 cut(s) 839, 871
PstNI CAGNNNCTG 1 cut(s) 1450
PsuI RGATCY 1 cut(s) 763
RsaI GTAC 4 cut(s) 283, 299, 507, 1316
RsaNI GTAC 4 cut(s) 282, 298, 506, 1315
RseI CAYNNNNRTG 5 cut(s) 99, 495, 543, 1223, 1552
SaqAI TTAA 4 cut(s) 645, 981, 1221, 1272
SatI GCNGC 7 cut(s) 398, 421, 588, 1029, 1042, 1089, 1568
Sau3AI GATC 3 cut(s) 112, 763, 1282
Sau96I GGNCC 3 cut(s) 187, 554, 599
SchI GAGTC 5 cut(s) 574, 995, 1001, 1271, 1537
SduI GDGCHC 1 cut(s) 624
SfaNI GCATC 1 cut(s) 1439
SfcI CTRYAG 1 cut(s) 850
SfuI TTCGAA 1 cut(s) 473
SinI GGWCC 3 cut(s) 187, 554, 599
SmaI CCCGGG 2 cut(s) 287, 353
SmiMI CAYNNNNRTG 5 cut(s) 99, 495, 543, 1223, 1552
SseBI AGGCCT 1 cut(s) 236
SsiI CCGC 5 cut(s) 400, 509, 587, 1117, 1123
SspI AATATT 1 cut(s) 1441
SspMI CTAG 3 cut(s) 150, 159, 411
StuI AGGCCT 1 cut(s) 236
StyI CCWWGG 3 cut(s) 49, 1384, 1553
TaaI ACNGT 2 cut(s) 439, 871
TaqI TCGA 3 cut(s) 222, 473, 901
TauI GCSGC 1 cut(s) 590
TfiI GAWTC 5 cut(s) 224, 632, 830, 937, 1077
Tru1I TTAA 4 cut(s) 645, 981, 1221, 1272
Tru9I TTAA 4 cut(s) 645, 981, 1221, 1272
TscAI CASTG 2 cut(s) 610, 874
TseFI GTSAC 2 cut(s) 1182, 1225
TseI GCWGC 6 cut(s) 397, 420, 1028, 1041, 1088, 1567
Tsp45I GTSAC 2 cut(s) 1182, 1225
TspDTI ATGAA 5 cut(s) 860, 1257, 1311, 1479, 1503
TspGWI ACGGA 1 cut(s) 521
TspMI CCCGGG 2 cut(s) 285, 351
TspRI CASTG 2 cut(s) 610, 874
Van91I CCANNNNNTGG 2 cut(s) 104, 929
VpaK11BI GGWCC 3 cut(s) 187, 554, 599
VspI ATTAAT 2 cut(s) 645, 1221
XapI RAATTY 4 cut(s) 41, 218, 835, 1244
XceI RCATGY 1 cut(s) 548
XcmI CCANNNNNNNNNTGG 1 cut(s) 930
XmaI CCCGGG 2 cut(s) 285, 351
XmnI GAANNNNTTC 3 cut(s) 360, 1142, 1302
XspI CTAG 3 cut(s) 150, 159, 411
Zsp2I ATGCAT 1 cut(s) 1432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.