pycom02g11030

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000165
Physical Location & Seq
Reverse (-)
7785751 .. 7787706
1956 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g11030.1

Sequence Viewer

Length: 1956 bp
ATGGAGGTTAGTGATGAAGCTGAGGCTTACCAGCTATGCAACACCTATGCCTTCAACAAAGGTTTTAGTATTCGGAAAGGTCATCTTCGGAGAGATTCGCAGAACAATGTCCGGCAGAGAGAATACACGTGCTCGAAAGAAGGGTTTCAAGTAGATGAAGACTTGTGTGAAGCGAGAAAAGTTCGAAGATTGGACACGAGGACAGGTTGCAAGGCTGTGATTCGGTTCAATGTGGAAAATGGTGTATGGAAGCTCTCGTACATTAATCCAATTCATAATCACGAGTTCGCTAGGCCTGAAGAGCGACAGTTTCTGAGGTCGGGGAGAAATATACCAAGTGTTCGTGCAACTATACTTGGCAGCTCTAAGGTTGATGGGAGTATACGACCAGCAAAGTTGCAATCATATTCAGGAAAGGAATTTGGAAGTGCTGAGAATGTTGGGGTTAGTAATAAAGATTTGCATAATTGTTTGCAAAGGGGGAAGGATGAATGGATTGCAGGGGATGGACAAAGCTTGATAAACTATTTTAAACGTAAACAGATGGAGGATCCGAGTTTTTTCTACAGTGTACAGGTGGATCAGTTTAATCGGATCACAAATTATTTTTGGAGAGACGGTAGATCAAAGTTGGATTATGATTGCTTTGCCGATGTTGTATGCTTTGACACTACGTTTCGAACCAACAACAATCTAATTTGTGCTCCATTTTTGGGAGTTAATCACCATTGGAAGAATATCTCATTTGGTTGTGCTTTTTTATTGGACGAGAGCACTGCCTCATTTACGTGGTTGTTCGAAACATTTTTGGAGTCAATGGGAAATAAACAGCCAGTAACCATTTTCACGGATGAGAATAAAGCAATGGAAAAGGCAAAGGCAATTGAGATTGTGTTTCCAGAGACGCGCCATCTGTTAAGCAATTGGCAAATCTCCAAGAATGCTACACAACATCTTGGTAGTCTTTGTGCTGATCCTGAATTCAAAAAGCACTTCAACAAATGCTTTTACGATTGTTTTACTGAACAAGAACTTCAACATGCCTGGGATGACATGATTAAAATGTTCAACCTTGAAAGCAACTCGTGGCTAAAGATGTTGTATTCACTTCGAGAGAAATGGTGTCCAGCATTTAGCTCAGATGCTTTCTCAGCAAATATTGGATCAAGCCAGAGGGGTGAGAATACGAACACCATTTTCCATCAAGTTTCCAGAAAAATAGTGGATCTTGTTAGTTTTGTACAGCACTATGAGCAAAAAACCAAAAAGATGCGGTTCACAGAGTTGGAAGAGGATTTTCGTTGTAAAAATGCGAAGCCTCGTCTTAGAGTAAATAGTAGTATATTTAAGCATGCAGCTACTGAGTACACTGTCAAAATGTATTCATTCTTTGAAAATGAGCTTATGAGCATTTTTGGGGTGAGGATGGTGGAAGTTGGTAATGACGGCAACCAATATATTTATGAAGCAGTCGAAGAAGGTCATCAAAGAGTCTTCATGATTCAGTACAACTCTACTACATCCACAGTTTCTTGTTCTTGTAAGTTATTTGAATCGATGGGCTTGTTGTGTCGTCATGCCCTCAAAGTGTTGGATTCTAAAAACTTCACAAGCATACCGACACAATACATAGTGAAGAGATGGACTAGAGAGGCCAAAAAAGGGATTGTGGCGAGTAATAAGTTCAGTAAGTCATCAGATGGAAAGGCCAACTCTTCTCAATCGTTGCGCCTAAGTGAGTTGATGCATGAAGGAACGAATGTTTTCAGTATAGGCTCATTGTGTGATTCGGGAAAAAGGATTGTCAAACAAAAGTTAGCGGAGACCATAAAGTTGCTGGAAAGTGACGAGGATACTACCTACATGCTAGGAAATTTGAGCAAAGTAGATGACCAATCTGTTCGCGAAATGTCTCTTGATAATGGGAGTGTGGAATCCCCCGGTTGTGACAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

652

Amino Acids

74.88

Weight (kDa)

7.98

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 14 - 97 4e-16 FAR1 DNA-binding domain
MULE PF10551 219 - 314 1.1e-19 MULE transposase domain
SWIM PF04434 509 - 534 3.9e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 382
AccII CGCG 2 cut(s) 907, 1905
AciI CCGC 2 cut(s) 1273, 1820
AclWI GGATC 7 cut(s) 545, 558, 588, 602, 968, 1171, 1233
AcsI RAATTY 3 cut(s) 419, 980, 1873
AcuI CTGAAG 1 cut(s) 318
AcvI CACGTG 1 cut(s) 129
AfaI GTAC 5 cut(s) 260, 573, 1242, 1367, 1508
AfiI CCNNNNNNNGG 2 cut(s) 713, 1662
AflIII ACRYGT 1 cut(s) 126
AjnI CCWGG 1 cut(s) 1043
AluBI AGCT 9 cut(s) 20, 34, 253, 363, 516, 1137, 1358, 1402, 1953
AluI AGCT 9 cut(s) 20, 34, 253, 363, 516, 1137, 1358, 1402, 1953
Alw21I GWGCWC 3 cut(s) 134, 706, 776
Alw26I GTCTC 4 cut(s) 609, 896, 1817, 1917
AlwI GGATC 7 cut(s) 545, 558, 588, 602, 968, 1171, 1233
AlwNI CAGNNNCTG 2 cut(s) 313, 1361
AoxI GGCC 3 cut(s) 293, 1653, 1707
ApeKI GCWGC 2 cut(s) 360, 1355
ApoI RAATTY 3 cut(s) 419, 980, 1873
AseI ATTAAT 1 cut(s) 264
Asp700I GAANNNNTTC 2 cut(s) 144, 1763
AspLEI GCGC 2 cut(s) 909, 1731
AsuC2I CCSGG 1 cut(s) 1941
AsuHPI GGTGA 3 cut(s) 716, 1190, 1432
AsuII TTCGAA 3 cut(s) 184, 679, 798
BamHI GGATCC 1 cut(s) 550
BarI GAAGNNNNNNTAC 2 cut(s) 242, 274
BauI CACGAG 3 cut(s) 196, 281, 1084
BbrPI CACGTG 1 cut(s) 129
BbsI GAAGAC 2 cut(s) 165, 1486
Bbv12I GWGCWC 3 cut(s) 134, 706, 776
BbvCI CCTCAGC 1 cut(s) 21
BbvI GCAGC 2 cut(s) 372, 1367
BccI CCATC 9 cut(s) 368, 500, 538, 918, 1209, 1420, 1552, 1635, 1694
BceAI ACGGC 1 cut(s) 1462
BcgI CGANNNNNNTGC 2 cut(s) 758, 792
BciT130I CCWGG 1 cut(s) 1045
BciVI GTATCC 1 cut(s) 1846
BcnI CCSGG 1 cut(s) 1941
BcoDI GTCTC 4 cut(s) 609, 896, 1817, 1917
BfaI CTAG 3 cut(s) 291, 1647, 1868
BfmI CTRYAG 1 cut(s) 565
BfuI GTATCC 1 cut(s) 1846
BisI GCNGC 2 cut(s) 361, 1356
BlsI GCNGC 2 cut(s) 362, 1357
Bme1390I CCNGG 2 cut(s) 1045, 1941
BmiI GGNNCC 1 cut(s) 552
BmrFI CCNGG 2 cut(s) 1045, 1941
BmsI GCATC 3 cut(s) 1132, 1260, 1734
BpiI GAAGAC 2 cut(s) 165, 1486
Bpu10I CCTNAGC 1 cut(s) 21
Bpu14I TTCGAA 3 cut(s) 184, 679, 798
BpuMI CCSGG 1 cut(s) 1941
Bsa29I ATCGAT 1 cut(s) 1556
BsaAI YACGTR 2 cut(s) 129, 789
BsaI GGTCTC 1 cut(s) 1817
BsaJI CCNNGG 2 cut(s) 1044, 1939
BsaXI ACNNNNNCTCC 2 cut(s) 604, 634
Bsc4I CCNNNNNNNGG 2 cut(s) 713, 1662
Bse1I ACTGG 1 cut(s) 833
Bse3DI GCAATG 1 cut(s) 870
BseBI CCWGG 1 cut(s) 1045
BseCI ATCGAT 1 cut(s) 1556
BseDI CCNNGG 2 cut(s) 1044, 1939
BseGI GGATG 6 cut(s) 493, 511, 856, 1054, 1431, 1520
BseLI CCNNNNNNNGG 2 cut(s) 713, 1662
BseMI GCAATG 1 cut(s) 870
BseMII CTCAG 6 cut(s) 12, 305, 423, 1152, 1164, 1353
BseNI ACTGG 1 cut(s) 833
BseXI GCAGC 2 cut(s) 372, 1367
Bsh1236I CGCG 2 cut(s) 907, 1905
BshFI GGCC 3 cut(s) 295, 1655, 1709
BshVI ATCGAT 1 cut(s) 1556
BsiHKAI GWGCWC 3 cut(s) 134, 706, 776
BsiSI CCGG 2 cut(s) 112, 1941
BslI CCNNNNNNNGG 2 cut(s) 713, 1662
BsmAI GTCTC 4 cut(s) 609, 896, 1817, 1917
BsmBI CGTCTC 2 cut(s) 609, 896
BsmI GAATGC 1 cut(s) 946
BsnI GGCC 3 cut(s) 295, 1655, 1709
Bso31I GGTCTC 1 cut(s) 1817
Bsp119I TTCGAA 3 cut(s) 184, 679, 798
Bsp1286I GDGCHC 3 cut(s) 134, 706, 776
Bsp1407I TGTACA 2 cut(s) 571, 1240
Bsp143I GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
Bsp68I TCGCGA 1 cut(s) 1905
BspACI CCGC 2 cut(s) 1273, 1820
BspANI GGCC 3 cut(s) 295, 1655, 1709
BspCNI CTCAG 6 cut(s) 13, 306, 424, 1151, 1163, 1354
BspDI ATCGAT 1 cut(s) 1556
BspFNI CGCG 2 cut(s) 907, 1905
BspHI TCATGA 1 cut(s) 1497
BspLI GGNNCC 1 cut(s) 552
BspPI GGATC 7 cut(s) 545, 558, 588, 602, 968, 1171, 1233
BspQI GCTCTTC 1 cut(s) 294
BspT104I TTCGAA 3 cut(s) 184, 679, 798
BspTNI GGTCTC 1 cut(s) 1817
BsrDI GCAATG 1 cut(s) 870
BsrGI TGTACA 2 cut(s) 571, 1240
BsrI ACTGG 1 cut(s) 833
BssECI CCNNGG 2 cut(s) 1044, 1939
BssMI GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
BssNAI GTATAC 1 cut(s) 383
BssSI CACGAG 3 cut(s) 196, 281, 1084
Bst1107I GTATAC 1 cut(s) 383
Bst2BI CACGAG 3 cut(s) 196, 281, 1084
Bst2UI CCWGG 1 cut(s) 1045
Bst4CI ACNGT 5 cut(s) 309, 569, 620, 1372, 1528
Bst6I CTCTTC 4 cut(s) 294, 1284, 1631, 1720
BstAUI TGTACA 2 cut(s) 571, 1240
BstBAI YACGTR 2 cut(s) 129, 789
BstBI TTCGAA 3 cut(s) 184, 679, 798
BstC8I GCNNGC 1 cut(s) 1353
BstDEI CTNAG 9 cut(s) 21, 314, 366, 432, 1138, 1150, 1325, 1362, 1733
BstF5I GGATG 6 cut(s) 493, 511, 856, 1054, 1431, 1520
BstFNI CGCG 2 cut(s) 907, 1905
BstHHI GCGC 2 cut(s) 909, 1731
BstKTI GATC 7 cut(s) 553, 583, 597, 626, 976, 1166, 1228
BstMAI GTCTC 4 cut(s) 609, 896, 1817, 1917
BstMBI GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
BstMWI GCNNNNNNNGC 3 cut(s) 301, 1151, 1252
BstNI CCWGG 1 cut(s) 1045
BstNSI RCATGY 3 cut(s) 1043, 1355, 1867
BstSCI CCNGG 2 cut(s) 1043, 1939
BstSFI CTRYAG 1 cut(s) 565
BstUI CGCG 2 cut(s) 907, 1905
BstV1I GCAGC 2 cut(s) 372, 1367
BstV2I GAAGAC 2 cut(s) 165, 1486
BstX2I RGATCY 2 cut(s) 550, 1225
BstYI RGATCY 2 cut(s) 550, 1225
BstZ17I GTATAC 1 cut(s) 383
Bsu15I ATCGAT 1 cut(s) 1556
BsuI GTATCC 1 cut(s) 1846
BsuRI GGCC 3 cut(s) 295, 1655, 1709
BsuTUI ATCGAT 1 cut(s) 1556
BtsCI GGATG 6 cut(s) 493, 511, 856, 1054, 1431, 1520
BtsI GCAGTG 1 cut(s) 774
BtsIMutI CAGTG 3 cut(s) 574, 774, 1368
BtuMI TCGCGA 1 cut(s) 1905
Cac8I GCNNGC 1 cut(s) 1353
CaiI CAGNNNCTG 2 cut(s) 313, 1361
CciI TCATGA 1 cut(s) 1497
CfoI GCGC 2 cut(s) 909, 1731
ClaI ATCGAT 1 cut(s) 1556
CseI GACGC 1 cut(s) 913
Csp6I GTAC 5 cut(s) 259, 572, 1241, 1366, 1507
CviAII CATG 7 cut(s) 1040, 1054, 1352, 1498, 1577, 1748, 1864
CviQI GTAC 5 cut(s) 259, 572, 1241, 1366, 1507
DdeI CTNAG 9 cut(s) 21, 314, 366, 432, 1138, 1150, 1325, 1362, 1733
DpnI GATC 7 cut(s) 552, 582, 596, 625, 975, 1165, 1227
DpnII GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
DraI TTTAAA 1 cut(s) 532
Eam1104I CTCTTC 4 cut(s) 294, 1284, 1631, 1720
EarI CTCTTC 4 cut(s) 294, 1284, 1631, 1720
Eco147I AGGCCT 1 cut(s) 295
Eco31I GGTCTC 1 cut(s) 1817
Eco57I CTGAAG 1 cut(s) 318
Eco72I CACGTG 1 cut(s) 129
EcoRI GAATTC 1 cut(s) 980
EcoRII CCWGG 1 cut(s) 1043
EcoT22I ATGCAT 1 cut(s) 1749
Esp3I CGTCTC 2 cut(s) 609, 896
FaeI CATG 7 cut(s) 1043, 1057, 1355, 1501, 1580, 1751, 1867
FalI AAGNNNNNCTT 2 cut(s) 69, 101
FatI CATG 7 cut(s) 1039, 1053, 1351, 1497, 1576, 1747, 1863
FblI GTMKAC 1 cut(s) 382
Fnu4HI GCNGC 2 cut(s) 361, 1356
FokI GGATG 6 cut(s) 500, 518, 863, 1061, 1438, 1507
Fsp4HI GCNGC 2 cut(s) 361, 1356
FspBI CTAG 3 cut(s) 291, 1647, 1868
GlaI GCGC 2 cut(s) 908, 1730
GluI GCNGC 2 cut(s) 361, 1356
HaeIII GGCC 3 cut(s) 295, 1655, 1709
HapII CCGG 2 cut(s) 112, 1941
HgaI GACGC 1 cut(s) 913
HhaI GCGC 2 cut(s) 909, 1731
Hin1II CATG 7 cut(s) 1043, 1057, 1355, 1501, 1580, 1751, 1867
Hin6I GCGC 2 cut(s) 907, 1729
HinP1I GCGC 2 cut(s) 907, 1729
HindIII AAGCTT 1 cut(s) 514
HinfI GANTC 9 cut(s) 95, 220, 812, 1491, 1501, 1553, 1595, 1787, 1934
HpaII CCGG 2 cut(s) 112, 1941
HphI GGTGA 3 cut(s) 716, 1190, 1432
Hpy166II GTNNAC 5 cut(s) 383, 539, 572, 1278, 1368
Hpy188I TCNGA 7 cut(s) 75, 90, 315, 555, 594, 1141, 1699
Hpy8I GTNNAC 5 cut(s) 383, 539, 572, 1278, 1368
HpyAV CCTTC 5 cut(s) 61, 134, 478, 1472, 1745
HpyCH4III ACNGT 5 cut(s) 309, 569, 620, 1372, 1528
HpyCH4IV ACGT 4 cut(s) 128, 535, 674, 788
HpyCH4V TGCA 9 cut(s) 39, 210, 347, 400, 463, 475, 500, 1355, 1747
HpyF10VI GCNNNNNNNGC 3 cut(s) 301, 1151, 1252
HpyF3I CTNAG 9 cut(s) 21, 314, 366, 432, 1138, 1150, 1325, 1362, 1733
HpySE526I ACGT 4 cut(s) 128, 535, 674, 788
Hsp92II CATG 7 cut(s) 1043, 1057, 1355, 1501, 1580, 1751, 1867
HspAI GCGC 2 cut(s) 907, 1729
Kzo9I GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
LguI GCTCTTC 1 cut(s) 294
LmnI GCTCC 1 cut(s) 709
Lsp1109I GCAGC 2 cut(s) 372, 1367
LweI GCATC 3 cut(s) 1132, 1260, 1734
MaeI CTAG 3 cut(s) 291, 1647, 1868
MaeII ACGT 4 cut(s) 128, 535, 674, 788
MaeIII GTNAC 3 cut(s) 835, 1844, 1946
MalI GATC 7 cut(s) 552, 582, 596, 625, 975, 1165, 1227
MboI GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
MfeI CAATTG 2 cut(s) 882, 922
MflI RGATCY 2 cut(s) 550, 1225
MhlI GDGCHC 3 cut(s) 134, 706, 776
MluCI AATT 9 cut(s) 270, 419, 466, 601, 696, 882, 922, 980, 1873
MlyI GAGTC 2 cut(s) 821, 1500
MmeI TCCRAC 3 cut(s) 612, 1266, 1572
Mph1103I ATGCAT 1 cut(s) 1749
MroXI GAANNNNTTC 2 cut(s) 144, 1763
MseI TTAA 7 cut(s) 264, 531, 588, 720, 917, 1059, 1347
MslI CAYNNNNRTG 1 cut(s) 787
MspI CCGG 2 cut(s) 112, 1941
MspR9I CCNGG 2 cut(s) 1045, 1941
MunI CAATTG 2 cut(s) 882, 922
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 1 cut(s) 1045
MvnI CGCG 2 cut(s) 907, 1905
MwoI GCNNNNNNNGC 3 cut(s) 301, 1151, 1252
NciI CCSGG 1 cut(s) 1941
NdeII GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
NlaIII CATG 7 cut(s) 1043, 1057, 1355, 1501, 1580, 1751, 1867
NlaIV GGNNCC 1 cut(s) 552
NmuCI GTSAC 2 cut(s) 1844, 1946
NruI TCGCGA 1 cut(s) 1905
NsiI ATGCAT 1 cut(s) 1749
NspI RCATGY 3 cut(s) 1043, 1355, 1867
NspV TTCGAA 3 cut(s) 184, 679, 798
PaeI GCATGC 1 cut(s) 1355
PagI TCATGA 1 cut(s) 1497
PceI AGGCCT 1 cut(s) 295
PciSI GCTCTTC 1 cut(s) 294
PctI GAATGC 1 cut(s) 946
PdmI GAANNNNTTC 2 cut(s) 144, 1763
PfeI GAWTC 7 cut(s) 95, 220, 1501, 1553, 1595, 1787, 1934
PkrI GCNGC 2 cut(s) 362, 1357
PleI GAGTC 2 cut(s) 820, 1499
PmaCI CACGTG 1 cut(s) 129
PmlI CACGTG 1 cut(s) 129
PpsI GAGTC 2 cut(s) 820, 1499
Ppu21I YACGTR 2 cut(s) 129, 789
PshBI ATTAAT 1 cut(s) 264
Psp6I CCWGG 1 cut(s) 1043
PspCI CACGTG 1 cut(s) 129
PspGI CCWGG 1 cut(s) 1043
PspN4I GGNNCC 1 cut(s) 552
PstNI CAGNNNCTG 2 cut(s) 313, 1361
PsuI RGATCY 2 cut(s) 550, 1225
RruI TCGCGA 1 cut(s) 1905
RsaI GTAC 5 cut(s) 260, 573, 1242, 1367, 1508
RsaNI GTAC 5 cut(s) 259, 572, 1241, 1366, 1507
RseI CAYNNNNRTG 1 cut(s) 787
SapI GCTCTTC 1 cut(s) 294
SaqAI TTAA 7 cut(s) 264, 531, 588, 720, 917, 1059, 1347
SatI GCNGC 2 cut(s) 361, 1356
Sau3AI GATC 7 cut(s) 550, 580, 594, 623, 973, 1163, 1225
SchI GAGTC 2 cut(s) 821, 1500
ScrFI CCNGG 2 cut(s) 1045, 1941
SduI GDGCHC 3 cut(s) 134, 706, 776
SfaNI GCATC 3 cut(s) 1132, 1260, 1734
SfcI CTRYAG 1 cut(s) 565
SfuI TTCGAA 3 cut(s) 184, 679, 798
SmiMI CAYNNNNRTG 1 cut(s) 787
SphI GCATGC 1 cut(s) 1355
Sse9I AATT 9 cut(s) 270, 419, 466, 601, 696, 882, 922, 980, 1873
SseBI AGGCCT 1 cut(s) 295
SsiI CCGC 2 cut(s) 1273, 1820
SspI AATATT 1 cut(s) 1159
SspMI CTAG 3 cut(s) 291, 1647, 1868
StuI AGGCCT 1 cut(s) 295
StyD4I CCNGG 2 cut(s) 1043, 1939
TaaI ACNGT 5 cut(s) 309, 569, 620, 1372, 1528
TaiI ACGT 4 cut(s) 131, 538, 677, 791
TaqI TCGA 7 cut(s) 134, 184, 679, 798, 1111, 1473, 1556
TasI AATT 9 cut(s) 270, 419, 466, 601, 696, 882, 922, 980, 1873
TatI WGTACW 4 cut(s) 571, 1240, 1365, 1506
TfiI GAWTC 7 cut(s) 95, 220, 1501, 1553, 1595, 1787, 1934
Tru1I TTAA 7 cut(s) 264, 531, 588, 720, 917, 1059, 1347
Tru9I TTAA 7 cut(s) 264, 531, 588, 720, 917, 1059, 1347
TscAI CASTG 3 cut(s) 574, 781, 1375
TseFI GTSAC 2 cut(s) 1844, 1946
TseI GCWGC 2 cut(s) 360, 1355
Tsp45I GTSAC 2 cut(s) 1844, 1946
TspDTI ATGAA 8 cut(s) 30, 171, 263, 504, 1374, 1479, 1486, 1764
TspGWI ACGGA 1 cut(s) 863
TspRI CASTG 3 cut(s) 574, 781, 1375
VspI ATTAAT 1 cut(s) 264
XapI RAATTY 3 cut(s) 419, 980, 1873
XceI RCATGY 3 cut(s) 1043, 1355, 1867
XcmI CCANNNNNNNNNTGG 2 cut(s) 1219, 1834
XmiI GTMKAC 1 cut(s) 382
XmnI GAANNNNTTC 2 cut(s) 144, 1763
XspI CTAG 3 cut(s) 291, 1647, 1868
Zsp2I ATGCAT 1 cut(s) 1749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.