AT4G38180

far1-related sequence

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000165
Physical Location & Seq
Reverse (-)
17906514 .. 17909743
3230 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G38180.1

Sequence Viewer

Length: 2367 bp
ATGATGGATAATGAAGTGCTCGACTTCGATATTGGTGTAGGAGTTAGTAGTGGCGGAGATGTTGATGACGACGCTATTGATATTGAGCACCATGCTCTCGACGACGATGATATGCTCGACAGCCCAATTATGCCTTGCGGTAATGGTCTTGTTGGCAATTCTGGAAATTACTTTCCCAACCAGGAGGAGGAGGCTTGTGATCTCCTGGATCTCGAGCCCTATGATGGTCTTGAATTCGAGTCCGAAGAAGCTGCCAAGGCATTCTACAACTCGTATGCCCGTCGCATTGGCTTTAGTACCCGTGTCAGTTCCTCCCGCCGCTCCCGCCGTGATGGAGCTATCATCCAGAGGCAATTTGTCTGTGCCAAAGAAGGTTTCAGAAATATGAATGAAAAGCGCACCAAGGACAGGGAGATCAAGCGTCCCAGGACCATCACTCGAGTCGGTTGCAAAGCCTCCCTCTCTGTTAAGATGCAGGATTCCGGTAAATGGCTTGTCTCTGGCTTTGTCAAAGACCACAACCATGAGCTTGTTCCTCCCGACCAAGTTCACTGTCTGCGTTCCCACAGGCAAATCTCTGGCCCTGCCAAGACTTTGATTGACACACTTCAAGCTGCAGGAATGGGTCCCCGCAGAATCATGTCCGCCCTCATCAAAGAGTATGGTGGCATCAGCAAGGTTGGTTTCACCGAAGTGGACTGTAGGAATTATATGAGGAACAACCGCCAGAAGAGCATAGAAGGAGAGATTCAGCTTCTTCTTGACTACTTGAGGCAGATGAATGCTGACAACCCAAACTTCTTTTATTCTGTTCAGGGAAGCGAAGATCAGTCTGTTGGTAATGTCTTCTGGGCTGATCCTAAAGCTATAATGGATTTCACTCACTTTGGAGACACCGTTACATTTGATACAACCTACAGGTCCAACAGGTACCGTTTGCCTTTCGCACCCTTCACTGGTGTAAATCACCATGGCCAACCCATTCTTTTCGGCTGTGCCTTTATCATCAATGAAACTGAGGCTTCATTTGTATGGCTTTTCAATACGTGGCTAGCCGCAATGTCCGCCCACCCTCCTGTCTCAATCACCACCGATCATGATGCTGTTATACGTGCAGCCATCATGCACGTTTTTCCTGGTGCCCGCCATCGCTTTTGCAAATGGCATATTTTAAAGAAATGTCAGGAGAAGCTGTCGCATGTCTTCCTCAAGCATCCTTCGTTTGAGTCAGATTTCCACAAATGTGTCAATCTGACAGAGTCGGTTGAGGATTTTGAGAGATGCTGGTTTTCACTTCTTGACAAGTATGAGCTAAGAGATCATGAGTGGCTACAAGCAATATACTCCGATCGCCGGCAGTGGGTCCCAGTATATCTCCGTGATACCTTTTTTGCCGACATGTCCTTAACTCATCGTAGTGATAGTATCAATTCATATTTTGATGGTTATATAAACGCTTCAACCAATCTAAGCCAGTTCTTTAAGCTGTATGAAAAAGCTTTGGAGAGTCGTCTCGAGAAAGAAGTTAAAGCAGATTATGACACAATGAACTCACCTCCTGTTCTGAAGACTCCATCTCCAATGGAGAAGCAGGCGTCTGAACTTTACACAAGGAAGTTGTTTATGAGATTTCAGGAAGAACTAGTTGGAACCCTGACTTTCATGGCATCCAAAGCTGACGATGATGGGGATCTTGTTACCTACCAGGTTGCGAAATATGGAGAGGCTCACAAGGCTCATTTCGTTAAGTTCAACGTTTTGGAGATGAGAGCAAATTGCAGTTGCCAGATGTTTGAGTTCTCTGGCATCATTTGCAGACATATATTGGCAGTCTTCCGGGTCACCAATCTCCTTACACTTCCACCTTACTACATCCTAAAAAGATGGACCAGAAATGCCAAAAGCAGTGTTATATTTGATGATTATAATTTGCATGCGTATGCTAATTACCTGGAGTCTCATACCGTCCGATACAACACCTTACGTCACAAAGCTTCTAATTTTGTGCAAGAAGCTGGAAAATCTCTGTATACTTGTGATGTCGCAGTTGTTGCTCTGCAAGAAGCTGCCAAGACTGTGTCCCTGGCAATGAATAAGGAAGTTAGAAGAACTATGGCGAACAGGCATTTTAAAGCGAGTTCTGTAACTGGTGGAAAACATCAGCAAGAAGTGCTGGCGCAACCTGAGCCCGAGGACGAAATGGACAAGAAGATTAATCAGCTCAGAAACGAGCTGGAATTAGCAAACAGGAAATGCGAAGCTTACAGGACTAACCTACTTTCAGTTTTGAAAGAAATGGAAGACCAAAAGTTACAAGTGTCCATCAAAGTGCAGAACATCAAAATTAGCTTGAAGGATAATCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

788

Amino Acids

90.48

Weight (kDa)

6.4

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 88 - 179 1.9e-33 FAR1 DNA-binding domain
MULE PF10551 300 - 393 4.9e-30 MULE transposase domain
SWIM PF04434 587 - 613 8.6e-10 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1926
Acc65I GGTACC 1 cut(s) 930
AccB1I GGYRCC 2 cut(s) 930, 1139
AccBSI CCGCTC 1 cut(s) 321
AccI GTMKAC 1 cut(s) 2030
AclI AACGTT 1 cut(s) 1755
AclWI GGATC 3 cut(s) 216, 851, 1698
AcoI YGGCCR 1 cut(s) 973
AcsI RAATTY 1 cut(s) 233
AcuI CTGAAG 1 cut(s) 1586
AcyI GRCGYC 1 cut(s) 1595
AfaI GTAC 2 cut(s) 298, 932
AfiI CCNNNNNNNGG 7 cut(s) 187, 224, 408, 489, 956, 1353, 1360
AflIII ACRYGT 1 cut(s) 1398
AgsI TTSAA 7 cut(s) 233, 611, 1042, 1461, 1753, 2290, 2353
AhlI ACTAGT 1 cut(s) 1642
AjnI CCWGG 7 cut(s) 180, 204, 425, 1135, 1704, 1950, 2082
AjuI GAANNNNNNNTTGG 4 cut(s) 359, 391, 1629, 1661
AleI CACNNNNGTG 2 cut(s) 692, 1242
Alw21I GWGCWC 2 cut(s) 21, 90
Alw26I GTCTC 5 cut(s) 502, 885, 1084, 1517, 1962
AlwI GGATC 3 cut(s) 216, 851, 1698
Ama87I CYCGRG 4 cut(s) 212, 438, 1514, 2189
AoxI GGCC 2 cut(s) 580, 973
ApeKI GCWGC 4 cut(s) 251, 614, 1115, 2066
ApoI RAATTY 1 cut(s) 233
AseI ATTAAT 1 cut(s) 2214
Asp718I GGTACC 1 cut(s) 930
AspLEI GCGC 2 cut(s) 399, 2179
AspS9I GGNCC 6 cut(s) 429, 581, 626, 921, 1363, 1887
AsuC2I CCSGG 1 cut(s) 1838
AsuHPI GGTGA 5 cut(s) 679, 959, 1078, 1545, 1834
AsuNHI GCTAGC 1 cut(s) 1051
AvaI CYCGRG 4 cut(s) 212, 438, 1514, 2189
AvaII GGWCC 5 cut(s) 429, 626, 921, 1363, 1887
BaeGI GKGCMC 1 cut(s) 1144
BalI TGGCCA 1 cut(s) 975
BanI GGYRCC 2 cut(s) 930, 1139
BanII GRGCYC 2 cut(s) 219, 2190
BbsI GAAGAC 5 cut(s) 838, 1195, 1574, 1825, 2307
Bbv12I GWGCWC 2 cut(s) 21, 90
BbvI GCAGC 4 cut(s) 238, 601, 1127, 2053
BceAI ACGGC 1 cut(s) 312
BcgI CGANNNNNNTGC 6 cut(s) 233, 267, 429, 463, 1082, 1116
BciT130I CCWGG 7 cut(s) 182, 206, 427, 1137, 1706, 1952, 2084
BcnI CCSGG 1 cut(s) 1838
BcoDI GTCTC 5 cut(s) 502, 885, 1084, 1517, 1962
BcuI ACTAGT 1 cut(s) 1642
BfaI CTAG 2 cut(s) 1052, 1643
BfmI CTRYAG 3 cut(s) 615, 700, 916
BisI GCNGC 6 cut(s) 252, 319, 615, 1056, 1116, 2067
BlsI GCNGC 6 cut(s) 253, 320, 616, 1057, 1117, 2068
Bme1390I CCNGG 8 cut(s) 182, 206, 427, 1137, 1706, 1838, 1952, 2084
Bme18I GGWCC 5 cut(s) 429, 626, 921, 1363, 1887
BmeT110I CYCGRG 4 cut(s) 212, 438, 1514, 2189
BmgT120I GGNCC 6 cut(s) 429, 581, 626, 921, 1363, 1887
BmiI GGNNCC 7 cut(s) 627, 628, 932, 1141, 1364, 1365, 1651
BmrFI CCNGG 8 cut(s) 182, 206, 427, 1137, 1706, 1838, 1952, 2084
BmrI ACTGGG 1 cut(s) 1361
BmsI GCATC 7 cut(s) 462, 678, 1090, 1222, 1271, 1676, 1815
BmtI GCTAGC 1 cut(s) 1055
BmuI ACTGGG 1 cut(s) 1361
BpiI GAAGAC 5 cut(s) 838, 1195, 1574, 1825, 2307
BpmI CTGGAG 1 cut(s) 1973
Bpu10I CCTNAGC 1 cut(s) 2184
BpuEI CTTGAG 2 cut(s) 790, 1193
BpuMI CCSGG 1 cut(s) 1838
BsaAI YACGTR 2 cut(s) 1047, 1112
BsaBI GATNNNNATC 1 cut(s) 1689
BsaHI GRCGYC 1 cut(s) 1595
BsaJI CCNNGG 6 cut(s) 255, 402, 425, 970, 2082, 2190
BsaWI WCCGGW 1 cut(s) 482
BsaXI ACNNNNNCTCC 6 cut(s) 882, 912, 1178, 1208, 1561, 1591
Bsc4I CCNNNNNNNGG 7 cut(s) 187, 224, 408, 489, 956, 1353, 1360
Bse118I RCCGGY 1 cut(s) 1353
Bse1I ACTGG 4 cut(s) 961, 1367, 1474, 2152
Bse3DI GCAATG 2 cut(s) 1065, 2094
Bse8I GATNNNNATC 1 cut(s) 1689
BseBI CCWGG 7 cut(s) 182, 206, 427, 1137, 1706, 1952, 2084
BseDI CCNNGG 6 cut(s) 255, 402, 425, 970, 2082, 2190
BseGI GGATG 4 cut(s) 342, 1213, 1667, 1872
BseJI GATNNNNATC 1 cut(s) 1689
BseLI CCNNNNNNNGG 7 cut(s) 187, 224, 408, 489, 956, 1353, 1360
BseMI GCAATG 2 cut(s) 1065, 2094
BseMII CTCAG 3 cut(s) 1008, 2175, 2236
BseNI ACTGG 4 cut(s) 961, 1367, 1474, 2152
BseRI GAGGAG 2 cut(s) 200, 203
BseSI GKGCMC 1 cut(s) 1144
BseXI GCAGC 4 cut(s) 238, 601, 1127, 2053
BsgI GTGCAG 2 cut(s) 1134, 2351
Bsh1285I CGRYCG 1 cut(s) 1351
BshFI GGCC 2 cut(s) 582, 975
BshNI GGYRCC 2 cut(s) 930, 1139
BsiEI CGRYCG 1 cut(s) 1351
BsiHKAI GWGCWC 2 cut(s) 21, 90
BsiHKCI CYCGRG 4 cut(s) 212, 438, 1514, 2189
BsiSI CCGG 3 cut(s) 483, 1354, 1837
BslFI GGGAC 4 cut(s) 408, 612, 1349, 2065
BslI CCNNNNNNNGG 7 cut(s) 187, 224, 408, 489, 956, 1353, 1360
BsmAI GTCTC 5 cut(s) 502, 885, 1084, 1517, 1962
BsmBI CGTCTC 1 cut(s) 1517
BsmFI GGGAC 4 cut(s) 408, 612, 1349, 2065
BsmI GAATGC 2 cut(s) 260, 787
BsnI GGCC 2 cut(s) 582, 975
BsoBI CYCGRG 4 cut(s) 212, 438, 1514, 2189
Bsp1286I GDGCHC 5 cut(s) 21, 90, 219, 1144, 2190
Bsp143I GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
Bsp19I CCATGG 1 cut(s) 970
BspANI GGCC 2 cut(s) 582, 975
BspCNI CTCAG 3 cut(s) 1009, 2176, 2235
BspHI TCATGA 2 cut(s) 1096, 1321
BspLI GGNNCC 7 cut(s) 627, 628, 932, 1141, 1364, 1365, 1651
BspMAI CTGCAG 1 cut(s) 619
BspOI GCTAGC 1 cut(s) 1055
BspPI GGATC 3 cut(s) 216, 851, 1698
BspQI GCTCTTC 1 cut(s) 725
BspT107I GGYRCC 2 cut(s) 930, 1139
BsrBI CCGCTC 1 cut(s) 321
BsrDI GCAATG 2 cut(s) 1065, 2094
BsrFI RCCGGY 1 cut(s) 1353
BsrI ACTGG 4 cut(s) 961, 1367, 1474, 2152
BssAI RCCGGY 1 cut(s) 1353
BssECI CCNNGG 6 cut(s) 255, 402, 425, 970, 2082, 2190
BssMI GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
BssNAI GTATAC 1 cut(s) 2031
BssNI GRCGYC 1 cut(s) 1595
BssT1I CCWWGG 3 cut(s) 255, 402, 970
Bst1107I GTATAC 1 cut(s) 2031
Bst2UI CCWGG 7 cut(s) 182, 206, 427, 1137, 1706, 1952, 2084
Bst4CI ACNGT 6 cut(s) 554, 701, 898, 935, 1966, 2077
Bst6I CTCTTC 1 cut(s) 725
BstACI GRCGYC 1 cut(s) 1595
BstAPI GCANNNNNTGC 3 cut(s) 1812, 2051, 2170
BstBAI YACGTR 2 cut(s) 1047, 1112
BstC8I GCNNGC 6 cut(s) 1053, 1144, 1355, 1593, 1935, 2175
BstDEI CTNAG 5 cut(s) 1017, 1313, 1469, 2184, 2222
BstDSI CCRYGG 1 cut(s) 970
BstEII GGTNACC 1 cut(s) 1840
BstF5I GGATG 4 cut(s) 342, 1213, 1667, 1872
BstHHI GCGC 2 cut(s) 399, 2179
BstKTI GATC 9 cut(s) 202, 211, 417, 829, 859, 1096, 1321, 1351, 1693
BstMAI GTCTC 5 cut(s) 502, 885, 1084, 1517, 1962
BstMBI GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
BstMCI CGRYCG 1 cut(s) 1351
BstNI CCWGG 7 cut(s) 182, 206, 427, 1137, 1706, 1952, 2084
BstNSI RCATGY 3 cut(s) 1202, 1402, 1937
BstPI GGTNACC 1 cut(s) 1840
BstSCI CCNGG 8 cut(s) 180, 204, 425, 1135, 1704, 1836, 1950, 2082
BstSFI CTRYAG 3 cut(s) 615, 700, 916
BstSLI GKGCMC 1 cut(s) 1144
BstV1I GCAGC 4 cut(s) 238, 601, 1127, 2053
BstV2I GAAGAC 5 cut(s) 838, 1195, 1574, 1825, 2307
BstX2I RGATCY 2 cut(s) 208, 1690
BstYI RGATCY 2 cut(s) 208, 1690
BstZ17I GTATAC 1 cut(s) 2031
BsuRI GGCC 2 cut(s) 582, 975
BtgI CCRYGG 1 cut(s) 970
BtgZI GCGATG 1 cut(s) 1133
BtsCI GGATG 4 cut(s) 342, 1213, 1667, 1872
BtsI GCAGTG 2 cut(s) 1364, 1912
BtsIMutI CAGTG 4 cut(s) 550, 954, 1364, 1912
Cac8I GCNNGC 6 cut(s) 1053, 1144, 1355, 1593, 1935, 2175
CciI TCATGA 2 cut(s) 1096, 1321
CfoI GCGC 2 cut(s) 399, 2179
Cfr10I RCCGGY 1 cut(s) 1353
Cfr13I GGNCC 6 cut(s) 429, 581, 626, 921, 1363, 1887
CseI GACGC 3 cut(s) 80, 410, 1584
CsiI ACCWGGT 1 cut(s) 1704
Csp6I GTAC 2 cut(s) 297, 931
CviQI GTAC 2 cut(s) 297, 931
DdeI CTNAG 5 cut(s) 1017, 1313, 1469, 2184, 2222
DpnI GATC 9 cut(s) 201, 210, 416, 828, 858, 1095, 1320, 1350, 1692
DpnII GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
DraI TTTAAA 2 cut(s) 1173, 2131
EaeI YGGCCR 1 cut(s) 973
Eam1104I CTCTTC 1 cut(s) 725
EarI CTCTTC 1 cut(s) 725
EciI GGCGGA 3 cut(s) 69, 634, 1054
Eco130I CCWWGG 3 cut(s) 255, 402, 970
Eco24I GRGCYC 2 cut(s) 219, 2190
Eco47I GGWCC 5 cut(s) 429, 626, 921, 1363, 1887
Eco57I CTGAAG 1 cut(s) 1586
Eco88I CYCGRG 4 cut(s) 212, 438, 1514, 2189
Eco91I GGTNACC 1 cut(s) 1840
EcoO109I RGGNCCY 2 cut(s) 626, 1363
EcoO65I GGTNACC 1 cut(s) 1840
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 7 cut(s) 180, 204, 425, 1135, 1704, 1950, 2082
EcoT14I CCWWGG 3 cut(s) 255, 402, 970
EcoT38I GRGCYC 2 cut(s) 219, 2190
ErhI CCWWGG 3 cut(s) 255, 402, 970
Esp3I CGTCTC 1 cut(s) 1517
FaqI GGGAC 4 cut(s) 408, 612, 1349, 2065
FauI CCCGC 4 cut(s) 323, 332, 638, 1151
FblI GTMKAC 1 cut(s) 2030
Fnu4HI GCNGC 6 cut(s) 252, 319, 615, 1056, 1116, 2067
FokI GGATG 4 cut(s) 329, 1200, 1654, 1859
FriOI GRGCYC 2 cut(s) 219, 2190
Fsp4HI GCNGC 6 cut(s) 252, 319, 615, 1056, 1116, 2067
FspBI CTAG 2 cut(s) 1052, 1643
GlaI GCGC 2 cut(s) 398, 2178
GluI GCNGC 6 cut(s) 252, 319, 615, 1056, 1116, 2067
GsuI CTGGAG 1 cut(s) 1973
HaeIII GGCC 2 cut(s) 582, 975
HapII CCGG 3 cut(s) 483, 1354, 1837
HgaI GACGC 3 cut(s) 80, 410, 1584
HhaI GCGC 2 cut(s) 399, 2179
Hin1I GRCGYC 1 cut(s) 1595
Hin6I GCGC 2 cut(s) 397, 2177
HinP1I GCGC 2 cut(s) 397, 2177
HindIII AAGCTT 3 cut(s) 1497, 1992, 2259
HpaII CCGG 3 cut(s) 483, 1354, 1837
HphI GGTGA 5 cut(s) 679, 959, 1078, 1545, 1834
Hpy166II GTNNAC 3 cut(s) 550, 697, 2031
Hpy188I TCNGA 9 cut(s) 244, 380, 1231, 1254, 1348, 1566, 1600, 1970, 2225
Hpy8I GTNNAC 3 cut(s) 550, 697, 2031
Hpy99I CGWCG 4 cut(s) 74, 104, 107, 285
HpyAV CCTTC 5 cut(s) 365, 734, 961, 1227, 2347
HpyCH4III ACNGT 6 cut(s) 554, 701, 898, 935, 1966, 2077
HpyCH4IV ACGT 5 cut(s) 1046, 1111, 1128, 1755, 1984
HpyF3I CTNAG 5 cut(s) 1017, 1313, 1469, 2184, 2222
HpySE526I ACGT 5 cut(s) 1046, 1111, 1128, 1755, 1984
Hsp92I GRCGYC 1 cut(s) 1595
HspAI GCGC 2 cut(s) 397, 2177
KflI GGGWCCC 2 cut(s) 626, 1363
KpnI GGTACC 1 cut(s) 934
KroI GCCGGC 1 cut(s) 1353
KroNI GCCGGC 1 cut(s) 1355
Kzo9I GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
LguI GCTCTTC 1 cut(s) 725
LmnI GCTCC 2 cut(s) 326, 335
Lsp1109I GCAGC 4 cut(s) 238, 601, 1127, 2053
LweI GCATC 7 cut(s) 462, 678, 1090, 1222, 1271, 1676, 1815
MabI ACCWGGT 1 cut(s) 1704
MaeI CTAG 2 cut(s) 1052, 1643
MaeII ACGT 5 cut(s) 1046, 1111, 1128, 1755, 1984
MaeIII GTNAC 6 cut(s) 898, 1696, 1840, 1985, 2143, 2310
MalI GATC 9 cut(s) 201, 210, 416, 828, 858, 1095, 1320, 1350, 1692
MbiI CCGCTC 1 cut(s) 321
MboI GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
MflI RGATCY 2 cut(s) 208, 1690
MhlI GDGCHC 5 cut(s) 21, 90, 219, 1144, 2190
MlsI TGGCCA 1 cut(s) 975
MluNI TGGCCA 1 cut(s) 975
MlyI GAGTC 7 cut(s) 248, 450, 1235, 1268, 1516, 1564, 1964
MmeI TCCRAC 2 cut(s) 948, 1627
Mox20I TGGCCA 1 cut(s) 975
MroNI GCCGGC 1 cut(s) 1353
MscI TGGCCA 1 cut(s) 975
MseI TTAA 8 cut(s) 468, 1172, 1406, 1482, 1527, 1746, 2130, 2214
MslI CAYNNNNRTG 7 cut(s) 522, 692, 1030, 1242, 1416, 1938, 2327
Msp20I TGGCCA 1 cut(s) 975
MspI CCGG 3 cut(s) 483, 1354, 1837
MspR9I CCNGG 8 cut(s) 182, 206, 427, 1137, 1706, 1838, 1952, 2084
Mva1269I GAATGC 2 cut(s) 260, 787
MvaI CCWGG 7 cut(s) 182, 206, 427, 1137, 1706, 1952, 2084
NaeI GCCGGC 1 cut(s) 1355
NciI CCSGG 1 cut(s) 1838
NcoI CCATGG 1 cut(s) 970
NdeII GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
NgoMIV GCCGGC 1 cut(s) 1353
NheI GCTAGC 1 cut(s) 1051
NlaIV GGNNCC 7 cut(s) 627, 628, 932, 1141, 1364, 1365, 1651
NmuCI GTSAC 2 cut(s) 1840, 1985
NspI RCATGY 3 cut(s) 1202, 1402, 1937
OliI CACNNNNGTG 2 cut(s) 692, 1242
PaeI GCATGC 1 cut(s) 1937
PaeR7I CTCGAG 3 cut(s) 212, 438, 1514
PagI TCATGA 2 cut(s) 1096, 1321
PciI ACATGT 1 cut(s) 1398
PciSI GCTCTTC 1 cut(s) 725
PctI GAATGC 2 cut(s) 260, 787
PdiI GCCGGC 1 cut(s) 1355
PfeI GAWTC 3 cut(s) 479, 636, 748
PflFI GACNNNGTC 2 cut(s) 1258, 2077
PfoI TCCNGGA 1 cut(s) 204
PkrI GCNGC 6 cut(s) 253, 320, 616, 1057, 1117, 2068
Ple19I CGATCG 1 cut(s) 1351
PleI GAGTC 7 cut(s) 247, 449, 1234, 1267, 1515, 1564, 1963
PpsI GAGTC 7 cut(s) 247, 449, 1234, 1267, 1515, 1564, 1963
Ppu21I YACGTR 2 cut(s) 1047, 1112
PpuMI RGGWCCY 2 cut(s) 626, 1363
PscI ACATGT 1 cut(s) 1398
PshBI ATTAAT 1 cut(s) 2214
PsiI TTATAA 1 cut(s) 1926
Psp1406I AACGTT 1 cut(s) 1755
Psp5II RGGWCCY 2 cut(s) 626, 1363
Psp6I CCWGG 7 cut(s) 180, 204, 425, 1135, 1704, 1950, 2082
PspEI GGTNACC 1 cut(s) 1840
PspGI CCWGG 7 cut(s) 180, 204, 425, 1135, 1704, 1950, 2082
PspN4I GGNNCC 7 cut(s) 627, 628, 932, 1141, 1364, 1365, 1651
PspPI GGNCC 6 cut(s) 429, 581, 626, 921, 1363, 1887
PspPPI RGGWCCY 2 cut(s) 626, 1363
PspXI VCTCGAGB 1 cut(s) 438
PstI CTGCAG 1 cut(s) 619
PsuI RGATCY 2 cut(s) 208, 1690
PsyI GACNNNGTC 2 cut(s) 1258, 2077
PvuI CGATCG 1 cut(s) 1351
RsaI GTAC 2 cut(s) 298, 932
RsaNI GTAC 2 cut(s) 297, 931
RseI CAYNNNNRTG 7 cut(s) 522, 692, 1030, 1242, 1416, 1938, 2327
SapI GCTCTTC 1 cut(s) 725
SaqAI TTAA 8 cut(s) 468, 1172, 1406, 1482, 1527, 1746, 2130, 2214
SatI GCNGC 6 cut(s) 252, 319, 615, 1056, 1116, 2067
Sau3AI GATC 9 cut(s) 199, 208, 414, 826, 856, 1093, 1318, 1348, 1690
Sau96I GGNCC 6 cut(s) 429, 581, 626, 921, 1363, 1887
SchI GAGTC 7 cut(s) 248, 450, 1235, 1268, 1516, 1564, 1964
ScrFI CCNGG 8 cut(s) 182, 206, 427, 1137, 1706, 1838, 1952, 2084
SduI GDGCHC 5 cut(s) 21, 90, 219, 1144, 2190
SexAI ACCWGGT 1 cut(s) 1704
SfaNI GCATC 7 cut(s) 462, 678, 1090, 1222, 1271, 1676, 1815
SfcI CTRYAG 3 cut(s) 615, 700, 916
Sfr274I CTCGAG 3 cut(s) 212, 438, 1514
SinI GGWCC 5 cut(s) 429, 626, 921, 1363, 1887
SlaI CTCGAG 3 cut(s) 212, 438, 1514
SmiMI CAYNNNNRTG 7 cut(s) 522, 692, 1030, 1242, 1416, 1938, 2327
SmlI CTYRAG 5 cut(s) 212, 438, 769, 1208, 1514
SmoI CTYRAG 5 cut(s) 212, 438, 769, 1208, 1514
SpeI ACTAGT 1 cut(s) 1642
SphI GCATGC 1 cut(s) 1937
SspMI CTAG 2 cut(s) 1052, 1643
StyD4I CCNGG 8 cut(s) 180, 204, 425, 1135, 1704, 1836, 1950, 2082
StyI CCWWGG 3 cut(s) 255, 402, 970
TaaI ACNGT 6 cut(s) 554, 701, 898, 935, 1966, 2077
TaiI ACGT 5 cut(s) 1049, 1114, 1131, 1758, 1987
TaqI TCGA 8 cut(s) 21, 27, 99, 117, 213, 237, 439, 1515
TauI GCSGC 2 cut(s) 321, 1058
TfiI GAWTC 3 cut(s) 479, 636, 748
Tru1I TTAA 8 cut(s) 468, 1172, 1406, 1482, 1527, 1746, 2130, 2214
Tru9I TTAA 8 cut(s) 468, 1172, 1406, 1482, 1527, 1746, 2130, 2214
TscAI CASTG 4 cut(s) 557, 961, 1364, 1912
TseFI GTSAC 2 cut(s) 1840, 1985
TseI GCWGC 4 cut(s) 251, 614, 1115, 2066
Tsp45I GTSAC 2 cut(s) 1840, 1985
TspGWI ACGGA 1 cut(s) 1367
TspRI CASTG 4 cut(s) 557, 961, 1364, 1912
Tth111I GACNNNGTC 2 cut(s) 1258, 2077
VpaK11BI GGWCC 5 cut(s) 429, 626, 921, 1363, 1887
VspI ATTAAT 1 cut(s) 2214
XapI RAATTY 1 cut(s) 233
XceI RCATGY 3 cut(s) 1202, 1402, 1937
XhoI CTCGAG 3 cut(s) 212, 438, 1514
XmiI GTMKAC 1 cut(s) 2030
XspI CTAG 2 cut(s) 1052, 1643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.