Prupe.7G188000_v2.0.a1

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000165
Physical Location & Seq
Forward (+)
18103116 .. 18106693
3578 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G188000.1

Sequence Viewer

Length: 2385 bp
ATGGAGTTTGAGCCGTTGAGCTTGGGCAATGATGTTATTGAATTTGACATGATGGGTTTGGGTGATATTGACCACTCTGTTGACCATGATGATGTCCTTCACGATTCTCCTCCTACTGCTATTCCTACTCCTAGTGTTTCTGATGTCGTTGGTAGTGCTGCCATTTTCGAACCTTACATCCCTGAAGGAGACACTAACCTTGAACCTTATGAGGGCATGGAATTCGAATCGGAGGAGGCTTCCAAGGCCTTCTACAACTCCTATGCTCGCCGCACTGGCTTCAGCACTCGTGTCAGTATGTCTCGACGCTCCAGGCGTGATGGTGCCATCATCCAGAGGTCTTTTGTTTGTGCTAGGGAGGGCTTTCGTGTGGATAAGCATGGCAAGCCTGGCTCTGACCGTGAAGGCAGGGTCAAGCGCCCCCGGCCTGAGACCCGAGTTGGTTGTAAGGCCATGTTGGTAGTCAAGATTCAAGACTCTGGGAAATGGGTTGTCTCTGCTTTTGTCAAGGAACATAACCATGAGCTGGTTCCTCCTGAAAGGGTGCATTGCCTCCGCTCTCATCGTCATGTCTCTGGTGCTGCAAAGTCCTTGATTGATACCTTGCAGGGTGCTGGCATTGGCCCCAGAGGGATTATGTCTGCCCTCGTCAAAGAATATGGTGGAATTAAGAACATTGGCTTCACAGAGCGTGACTGCAGGAATTACATGAGGAGTAGTAGGCAAAGGACCCTTGGAGGCGACACTCAGCTGCTCTTAGACTACTTGAAGGACAAGCAAGCCAAGGACCCGGCATTTTTCTTTGCTGTGCAGGGAGATGAAGATCAGTGCATGAGCAATGTCTTCTGGGCTGATCCTAAAGCAAGGACTGACTATACTTACTTCGGTGATACTGTTACATTTGACACAACTTACAGGTCAAACCGATACCGATTGCCTTTTGCACCTTTCACAGGGGTTAACCATCATGGACAGCCTGTGTTGTTCGGATGTGCCCTCCTGATAAATGAATCTGAGGCATCGTTTCTTTGGCTTTTCAAAACATGGCTCATAGCAATGTCCGGCCGGCCTCCACTCTCAATTACAACTGAACATGATCGAGTGATTAGCTTGGCCATCACCCAGGTTTTTCCTGATACCCGTCACCGCTTCTGCAAGTGGCACATCTTTAAAGAATGCCAAGAAAAGTTGTCCTATGTGCATTGTGAGCATTCCAACTTTGAAGCAGAGCTTCATAAATTTGTCAACCTGACCGAATCAGTTGAAGAGTTTGAGTCTTGTTGGTTTTCTTTAATTGATAAATATGATCTCAGGGAACATCAATGGCTTCAATTGATATATGCTGATCGGCGGCAGTGGGTCCCTGTATACCTGAGGGACACCTTCTTTGCAGAAATATCTATAACACAGCGCAGTGACAGCATGAACTCTTATTTTGATGGATATGTCAATGCATCAACAACTCTACTGCTGTTTGTTAAGCAGTATGAGAAAGCTCTTGAAAGCCGGTATGAGAAAGAAGTGAAGGCAGATTATGATACTATAAACACTGCTCCTATTCTTAAGACCCCTTCGCCCATGGAGAAACAGGCAGCTGGGCTTTACACAAGGAAAATGTTTATGAAATTTCAAGAAGAGTTGGTCGAGACATTAACTTTCTTGGCAATGAAAGTTGAGGATGAGGAGGCAGGATCCATATATCAAGTGTCTAAATTTGGGGAAAGCCATAAAGCGTATTTTGTTAGATTTAATGTTCATGAGATGAAAGCTTTTTGTAGTTGCCAGAGGTTTGAGTTCTCTGGCCTTCTTTGTGCACACATCTTGACAGTTTTTAGGGTGACAAATGTTCTTACTCTGCCACCTCATTATATTTTGAAGCGTTGGACAAGGAACGCCAAGAGTGGTGTCATATTGGAGGAACATGCCAGCGATTTGTTGAATAAGTCACAAGAATCTCTCACAGTACGATACAATAATCTGCGTCATGAGGCACTTAAGTATGTTGATGAAGGGGTTAAAACTGTTGAAATTTATAATGTGTCTATGGATGCCCTTGAAGAGGCTGCAAACAGAGTTTCTCTTGCAAAGAAGAATGACGGGAGATTGGCTATAATTAGTAGAGCTGGAAGAGACGATGGATTTCATTTAGGGAGTCGATCAAACACCTTTGGTGATCATAAATGGGGTTTCGAAACTCTGTCTGCGGATGAGCAGGACAAGAAAATCCAGAAACTTGAGCGCCAACTTGATCGTGCACAACGGAAATGTGAATTGTATAGAGCTAGTTTGCTTTCGGTTTTGAAAGATATTGAGGAGCAAAAATTACAGCTATCTGTTAAAGTTGAAAACATTAAATTAGGAATGAAAGAGAGTAGCATTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

795

Amino Acids

91.1

Weight (kDa)

6.46

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2034
AccB1I GGYRCC 1 cut(s) 323
AccB7I CCANNNNNTGG 1 cut(s) 526
AccBSI CCGCTC 1 cut(s) 558
AccI GTMKAC 1 cut(s) 1368
AciI CCGC 5 cut(s) 271, 556, 1147, 1351, 2204
AclWI GGATC 3 cut(s) 848, 1686, 1699
AcoI YGGCCR 2 cut(s) 1063, 1113
AcsI RAATTY 6 cut(s) 41, 221, 1238, 1625, 1712, 2028
AcuI CTGAAG 2 cut(s) 204, 265
AfaI GTAC 1 cut(s) 1965
AfiI CCNNNNNNNGG 4 cut(s) 212, 526, 953, 2059
AflII CTTAAG 2 cut(s) 1562, 1994
AjnI CCWGG 3 cut(s) 311, 388, 1122
AloI GAACNNNNNNTCC 2 cut(s) 162, 194
Alw21I GWGCWC 2 cut(s) 1816, 2257
Alw26I GTCTC 7 cut(s) 183, 306, 425, 499, 577, 1640, 2124
Alw44I GTGCAC 2 cut(s) 1812, 2253
AlwI GGATC 3 cut(s) 848, 1686, 1699
Ama87I CYCGRG 1 cut(s) 435
AoxI GGCC 8 cut(s) 246, 425, 450, 622, 1063, 1067, 1113, 1801
ApaLI GTGCAC 2 cut(s) 1812, 2253
ApeKI GCWGC 5 cut(s) 158, 581, 751, 1592, 2063
ApoI RAATTY 6 cut(s) 41, 221, 1238, 1625, 1712, 2028
ArsI GACNNNNNNTTYG 2 cut(s) 1370, 1402
AspLEI GCGC 3 cut(s) 420, 1413, 2241
AspS9I GGNCC 4 cut(s) 623, 729, 787, 1360
AsuC2I CCSGG 2 cut(s) 424, 791
AsuHPI GGTGA 6 cut(s) 74, 899, 1111, 1136, 1849, 2183
AsuII TTCGAA 3 cut(s) 168, 225, 2190
AvaI CYCGRG 1 cut(s) 435
AvaII GGWCC 3 cut(s) 729, 787, 1360
AxyI CCTNAGG 1 cut(s) 1373
BaeGI GKGCMC 3 cut(s) 997, 1816, 2257
BalI TGGCCA 1 cut(s) 1115
BamHI GGATCC 1 cut(s) 1691
BanI GGYRCC 1 cut(s) 323
BauI CACGAG 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 835
Bbv12I GWGCWC 2 cut(s) 1816, 2257
BbvI GCAGC 5 cut(s) 145, 568, 738, 1604, 2050
BccI CCATC 7 cut(s) 46, 314, 335, 972, 1124, 1433, 2129
BcgI CGANNNNNNTGC 2 cut(s) 205, 239
BciT130I CCWGG 3 cut(s) 313, 390, 1124
BclI TGATCA 1 cut(s) 2173
BcnI CCSGG 2 cut(s) 424, 791
BcoDI GTCTC 7 cut(s) 183, 306, 425, 499, 577, 1640, 2124
BfaI CTAG 3 cut(s) 132, 354, 2283
BfmI CTRYAG 1 cut(s) 697
BfoI RGCGCY 2 cut(s) 421, 2242
BfrI CTTAAG 2 cut(s) 1562, 1994
BglI GCCNNNNNGGC 1 cut(s) 276
BisI GCNGC 7 cut(s) 159, 271, 582, 752, 1352, 1593, 2064
BlsI GCNGC 7 cut(s) 160, 272, 583, 753, 1353, 1594, 2065
Bme1390I CCNGG 5 cut(s) 313, 390, 424, 791, 1124
Bme18I GGWCC 3 cut(s) 729, 787, 1360
BmeT110I CYCGRG 1 cut(s) 435
BmgT120I GGNCC 4 cut(s) 623, 729, 787, 1360
BmiI GGNNCC 8 cut(s) 325, 531, 625, 731, 789, 1361, 1362, 1693
BmrFI CCNGG 5 cut(s) 313, 390, 424, 791, 1124
BmsI GCATC 3 cut(s) 1028, 1463, 2038
BpiI GAAGAC 1 cut(s) 835
BpmI CTGGAG 1 cut(s) 295
Bpu14I TTCGAA 3 cut(s) 168, 225, 2190
BpuEI CTTGAG 1 cut(s) 2255
BpuMI CCSGG 2 cut(s) 424, 791
BsaBI GATNNNNATC 1 cut(s) 822
BsaI GGTCTC 1 cut(s) 425
BsaJI CCNNGG 6 cut(s) 243, 422, 733, 783, 1122, 1578
Bsc4I CCNNNNNNNGG 4 cut(s) 212, 526, 953, 2059
Bse118I RCCGGY 2 cut(s) 1065, 1506
Bse1I ACTGG 1 cut(s) 280
Bse21I CCTNAGG 1 cut(s) 1373
Bse3DI GCAATG 5 cut(s) 34, 547, 844, 1062, 1671
Bse8I GATNNNNATC 1 cut(s) 822
BseBI CCWGG 3 cut(s) 313, 390, 1124
BseDI CCNNGG 6 cut(s) 243, 422, 733, 783, 1122, 1578
BseGI GGATG 6 cut(s) 177, 330, 995, 1684, 2053, 2212
BseJI GATNNNNATC 1 cut(s) 822
BseLI CCNNNNNNNGG 4 cut(s) 212, 526, 953, 2059
BseMI GCAATG 5 cut(s) 34, 547, 844, 1062, 1671
BseMII CTCAG 5 cut(s) 420, 761, 1005, 1324, 1364
BseNI ACTGG 1 cut(s) 280
BseRI GAGGAG 5 cut(s) 99, 248, 727, 1697, 2327
BseSI GKGCMC 3 cut(s) 997, 1816, 2257
BseX3I CGGCCG 1 cut(s) 1063
BseXI GCAGC 5 cut(s) 145, 568, 738, 1604, 2050
BseYI CCCAGC 1 cut(s) 1595
BsgI GTGCAG 1 cut(s) 830
Bsh1285I CGRYCG 1 cut(s) 1066
BshFI GGCC 8 cut(s) 248, 427, 452, 624, 1065, 1069, 1115, 1803
BshNI GGYRCC 1 cut(s) 323
BsiEI CGRYCG 1 cut(s) 1066
BsiHKAI GWGCWC 2 cut(s) 1816, 2257
BsiHKCI CYCGRG 1 cut(s) 435
BsiSI CCGG 5 cut(s) 424, 791, 1062, 1066, 1507
BslFI GGGAC 2 cut(s) 1346, 1391
BslI CCNNNNNNNGG 4 cut(s) 212, 526, 953, 2059
BsmAI GTCTC 7 cut(s) 183, 306, 425, 499, 577, 1640, 2124
BsmBI CGTCTC 1 cut(s) 2124
BsmFI GGGAC 2 cut(s) 1346, 1391
BsmI GAATGC 2 cut(s) 1181, 1210
BsnI GGCC 8 cut(s) 248, 427, 452, 624, 1065, 1069, 1115, 1803
Bso31I GGTCTC 1 cut(s) 425
BsoBI CYCGRG 1 cut(s) 435
Bsp119I TTCGAA 3 cut(s) 168, 225, 2190
Bsp1286I GDGCHC 3 cut(s) 997, 1816, 2257
Bsp143I GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
Bsp19I CCATGG 1 cut(s) 1578
BspACI CCGC 5 cut(s) 271, 556, 1147, 1351, 2204
BspANI GGCC 8 cut(s) 248, 427, 452, 624, 1065, 1069, 1115, 1803
BspCNI CTCAG 5 cut(s) 421, 760, 1006, 1323, 1365
BspHI TCATGA 2 cut(s) 1756, 1984
BspLI GGNNCC 8 cut(s) 325, 531, 625, 731, 789, 1361, 1362, 1693
BspMAI CTGCAG 1 cut(s) 701
BspPI GGATC 3 cut(s) 848, 1686, 1699
BspT104I TTCGAA 3 cut(s) 168, 225, 2190
BspT107I GGYRCC 1 cut(s) 323
BspTI CTTAAG 2 cut(s) 1562, 1994
BspTNI GGTCTC 1 cut(s) 425
BsrBI CCGCTC 1 cut(s) 558
BsrDI GCAATG 5 cut(s) 34, 547, 844, 1062, 1671
BsrFI RCCGGY 2 cut(s) 1065, 1506
BsrI ACTGG 1 cut(s) 280
BssAI RCCGGY 2 cut(s) 1065, 1506
BssECI CCNNGG 6 cut(s) 243, 422, 733, 783, 1122, 1578
BssMI GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
BssNAI GTATAC 1 cut(s) 1369
BssSI CACGAG 1 cut(s) 288
BssT1I CCWWGG 4 cut(s) 243, 733, 783, 1578
Bst1107I GTATAC 1 cut(s) 1369
Bst2BI CACGAG 1 cut(s) 288
Bst2UI CCWGG 3 cut(s) 313, 390, 1124
Bst4CI ACNGT 5 cut(s) 401, 895, 1828, 1963, 2023
Bst6I CTCTTC 4 cut(s) 1260, 1629, 2052, 2122
BstAFI CTTAAG 2 cut(s) 1562, 1994
BstBI TTCGAA 3 cut(s) 168, 225, 2190
BstC8I GCNNGC 6 cut(s) 268, 386, 616, 780, 1067, 1927
BstDEI CTNAG 6 cut(s) 429, 747, 757, 1014, 1310, 1373
BstDSI CCRYGG 1 cut(s) 1578
BstENI CCTNNNNNAGG 2 cut(s) 951, 2057
BstF5I GGATG 6 cut(s) 177, 330, 995, 1684, 2053, 2212
BstH2I RGCGCY 2 cut(s) 421, 2242
BstHHI GCGC 3 cut(s) 420, 1413, 2241
BstKTI GATC 9 cut(s) 826, 856, 1099, 1309, 1348, 1694, 2159, 2176, 2251
BstMAI GTCTC 7 cut(s) 183, 306, 425, 499, 577, 1640, 2124
BstMBI GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
BstMCI CGRYCG 1 cut(s) 1066
BstMWI GCNNNNNNNGC 7 cut(s) 245, 276, 385, 390, 424, 1207, 1419
BstNI CCWGG 3 cut(s) 313, 390, 1124
BstNSI RCATGY 1 cut(s) 1925
BstSCI CCNGG 5 cut(s) 311, 388, 422, 789, 1122
BstSFI CTRYAG 1 cut(s) 697
BstSLI GKGCMC 3 cut(s) 997, 1816, 2257
BstV1I GCAGC 5 cut(s) 145, 568, 738, 1604, 2050
BstV2I GAAGAC 1 cut(s) 835
BstX2I RGATCY 1 cut(s) 1691
BstYI RGATCY 1 cut(s) 1691
BstZ17I GTATAC 1 cut(s) 1369
BstZI CGGCCG 1 cut(s) 1063
Bsu36I CCTNAGG 1 cut(s) 1373
BsuRI GGCC 8 cut(s) 248, 427, 452, 624, 1065, 1069, 1115, 1803
BtgI CCRYGG 1 cut(s) 1578
BtsCI GGATG 6 cut(s) 177, 330, 995, 1684, 2053, 2212
BtsI GCAGTG 3 cut(s) 1361, 1420, 1548
BtsIMutI CAGTG 5 cut(s) 273, 833, 1361, 1420, 1548
Cac8I GCNNGC 6 cut(s) 268, 386, 616, 780, 1067, 1927
CciI TCATGA 2 cut(s) 1756, 1984
CfoI GCGC 3 cut(s) 420, 1413, 2241
Cfr10I RCCGGY 2 cut(s) 1065, 1506
Cfr13I GGNCC 4 cut(s) 623, 729, 787, 1360
CseI GACGC 2 cut(s) 315, 1970
Csp6I GTAC 1 cut(s) 1964
CviQI GTAC 1 cut(s) 1964
DdeI CTNAG 6 cut(s) 429, 747, 757, 1014, 1310, 1373
DpnI GATC 9 cut(s) 825, 855, 1098, 1308, 1347, 1693, 2158, 2175, 2250
DpnII GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
DraI TTTAAA 1 cut(s) 1171
EaeI YGGCCR 2 cut(s) 1063, 1113
EagI CGGCCG 1 cut(s) 1063
Eam1104I CTCTTC 4 cut(s) 1260, 1629, 2052, 2122
EarI CTCTTC 4 cut(s) 1260, 1629, 2052, 2122
EclXI CGGCCG 1 cut(s) 1063
Eco130I CCWWGG 4 cut(s) 243, 733, 783, 1578
Eco147I AGGCCT 1 cut(s) 248
Eco31I GGTCTC 1 cut(s) 425
Eco47I GGWCC 3 cut(s) 729, 787, 1360
Eco52I CGGCCG 1 cut(s) 1063
Eco57I CTGAAG 2 cut(s) 204, 265
Eco81I CCTNAGG 1 cut(s) 1373
Eco88I CYCGRG 1 cut(s) 435
EcoNI CCTNNNNNAGG 2 cut(s) 951, 2057
EcoO109I RGGNCCY 3 cut(s) 729, 787, 1360
EcoRI GAATTC 1 cut(s) 221
EcoRII CCWGG 3 cut(s) 311, 388, 1122
EcoT14I CCWWGG 4 cut(s) 243, 733, 783, 1578
EcoT22I ATGCAT 1 cut(s) 1456
ErhI CCWWGG 4 cut(s) 243, 733, 783, 1578
Esp3I CGTCTC 1 cut(s) 2124
FalI AAGNNNNNCTT 2 cut(s) 1215, 1247
FaqI GGGAC 2 cut(s) 1346, 1391
FbaI TGATCA 1 cut(s) 2173
FblI GTMKAC 1 cut(s) 1368
Fnu4HI GCNGC 7 cut(s) 159, 271, 582, 752, 1352, 1593, 2064
FokI GGATG 6 cut(s) 164, 317, 1002, 1691, 2060, 2219
FseI GGCCGGCC 1 cut(s) 1069
Fsp4HI GCNGC 7 cut(s) 159, 271, 582, 752, 1352, 1593, 2064
FspBI CTAG 3 cut(s) 132, 354, 2283
GlaI GCGC 3 cut(s) 419, 1412, 2240
GluI GCNGC 7 cut(s) 159, 271, 582, 752, 1352, 1593, 2064
GsaI CCCAGC 1 cut(s) 1599
GsuI CTGGAG 1 cut(s) 295
HaeII RGCGCY 2 cut(s) 421, 2242
HaeIII GGCC 8 cut(s) 248, 427, 452, 624, 1065, 1069, 1115, 1803
HapII CCGG 5 cut(s) 424, 791, 1062, 1066, 1507
HgaI GACGC 2 cut(s) 315, 1970
HhaI GCGC 3 cut(s) 420, 1413, 2241
Hin6I GCGC 3 cut(s) 418, 1411, 2239
HinP1I GCGC 3 cut(s) 418, 1411, 2239
HincII GTYRAC 3 cut(s) 82, 961, 1246
HindII GTYRAC 3 cut(s) 82, 961, 1246
HindIII AAGCTT 1 cut(s) 1767
HinfI GANTC 9 cut(s) 104, 227, 469, 476, 1010, 1256, 1274, 1952, 2152
HpaI GTTAAC 1 cut(s) 961
HpaII CCGG 5 cut(s) 424, 791, 1062, 1066, 1507
HphI GGTGA 6 cut(s) 74, 899, 1111, 1136, 1849, 2183
Hpy166II GTNNAC 6 cut(s) 82, 961, 1246, 1369, 1814, 2255
Hpy188I TCNGA 5 cut(s) 142, 232, 397, 989, 1015
Hpy8I GTNNAC 6 cut(s) 82, 961, 1246, 1369, 1814, 2255
Hpy99I CGWCG 1 cut(s) 309
HpyCH4III ACNGT 5 cut(s) 401, 895, 1828, 1963, 2023
HpyF10VI GCNNNNNNNGC 7 cut(s) 245, 276, 385, 390, 424, 1207, 1419
HpyF3I CTNAG 6 cut(s) 429, 747, 757, 1014, 1310, 1373
HspAI GCGC 3 cut(s) 418, 1411, 2239
KflI GGGWCCC 1 cut(s) 1360
KroI GCCGGC 1 cut(s) 1065
KroNI GCCGGC 1 cut(s) 1067
Ksp22I TGATCA 1 cut(s) 2173
KspAI GTTAAC 1 cut(s) 961
Kzo9I GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
LmnI GCTCC 3 cut(s) 314, 1558, 2314
Lsp1109I GCAGC 5 cut(s) 145, 568, 738, 1604, 2050
LweI GCATC 3 cut(s) 1028, 1463, 2038
MaeI CTAG 3 cut(s) 132, 354, 2283
MaeIII GTNAC 6 cut(s) 692, 895, 1142, 1415, 1837, 1944
MalI GATC 9 cut(s) 825, 855, 1098, 1308, 1347, 1693, 2158, 2175, 2250
MbiI CCGCTC 1 cut(s) 558
MboI GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
MboII GAAGA 7 cut(s) 833, 835, 1277, 1646, 2069, 2101, 2139
MfeI CAATTG 1 cut(s) 1331
MflI RGATCY 1 cut(s) 1691
MhlI GDGCHC 3 cut(s) 997, 1816, 2257
MlsI TGGCCA 1 cut(s) 1115
MluNI TGGCCA 1 cut(s) 1115
MlyI GAGTC 3 cut(s) 470, 1283, 2161
MmeI TCCRAC 2 cut(s) 1239, 1862
Mox20I TGGCCA 1 cut(s) 1115
Mph1103I ATGCAT 1 cut(s) 1456
MroNI GCCGGC 1 cut(s) 1065
MscI TGGCCA 1 cut(s) 1115
MslI CAYNNNNRTG 4 cut(s) 90, 519, 567, 1055
Msp20I TGGCCA 1 cut(s) 1115
MspA1I CMGCKG 2 cut(s) 751, 1595
MspCI CTTAAG 2 cut(s) 1562, 1994
MspI CCGG 5 cut(s) 424, 791, 1062, 1066, 1507
MspR9I CCNGG 5 cut(s) 313, 390, 424, 791, 1124
MunI CAATTG 1 cut(s) 1331
Mva1269I GAATGC 2 cut(s) 1181, 1210
MvaI CCWGG 3 cut(s) 313, 390, 1124
MwoI GCNNNNNNNGC 7 cut(s) 245, 276, 385, 390, 424, 1207, 1419
NaeI GCCGGC 1 cut(s) 1067
NciI CCSGG 2 cut(s) 424, 791
NcoI CCATGG 1 cut(s) 1578
NdeII GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
NgoMIV GCCGGC 1 cut(s) 1065
NlaIV GGNNCC 8 cut(s) 325, 531, 625, 731, 789, 1361, 1362, 1693
NmuCI GTSAC 5 cut(s) 692, 1142, 1415, 1837, 1944
NsiI ATGCAT 1 cut(s) 1456
NspI RCATGY 1 cut(s) 1925
NspV TTCGAA 3 cut(s) 168, 225, 2190
PagI TCATGA 2 cut(s) 1756, 1984
PceI AGGCCT 1 cut(s) 248
PcsI WCGNNNNNNNCGW 1 cut(s) 313
PctI GAATGC 2 cut(s) 1181, 1210
PdiI GCCGGC 1 cut(s) 1067
PfeI GAWTC 6 cut(s) 104, 227, 469, 1010, 1256, 1952
PflMI CCANNNNNTGG 1 cut(s) 526
PkrI GCNGC 7 cut(s) 160, 272, 583, 753, 1353, 1594, 2065
PleI GAGTC 3 cut(s) 470, 1282, 2160
PpsI GAGTC 3 cut(s) 470, 1282, 2160
PpuMI RGGWCCY 3 cut(s) 729, 787, 1360
PsiI TTATAA 1 cut(s) 2034
Psp5II RGGWCCY 3 cut(s) 729, 787, 1360
Psp6I CCWGG 3 cut(s) 311, 388, 1122
PspFI CCCAGC 1 cut(s) 1595
PspGI CCWGG 3 cut(s) 311, 388, 1122
PspN4I GGNNCC 8 cut(s) 325, 531, 625, 731, 789, 1361, 1362, 1693
PspPI GGNCC 4 cut(s) 623, 729, 787, 1360
PspPPI RGGWCCY 3 cut(s) 729, 787, 1360
PstI CTGCAG 1 cut(s) 701
PsuI RGATCY 1 cut(s) 1691
PvuII CAGCTG 2 cut(s) 751, 1595
RigI GGCCGGCC 1 cut(s) 1069
RsaI GTAC 1 cut(s) 1965
RsaNI GTAC 1 cut(s) 1964
RseI CAYNNNNRTG 4 cut(s) 90, 519, 567, 1055
SatI GCNGC 7 cut(s) 159, 271, 582, 752, 1352, 1593, 2064
Sau3AI GATC 9 cut(s) 823, 853, 1096, 1306, 1345, 1691, 2156, 2173, 2248
Sau96I GGNCC 4 cut(s) 623, 729, 787, 1360
SchI GAGTC 3 cut(s) 470, 1283, 2161
ScrFI CCNGG 5 cut(s) 313, 390, 424, 791, 1124
SduI GDGCHC 3 cut(s) 997, 1816, 2257
SfaNI GCATC 3 cut(s) 1028, 1463, 2038
SfcI CTRYAG 1 cut(s) 697
SfuI TTCGAA 3 cut(s) 168, 225, 2190
SinI GGWCC 3 cut(s) 729, 787, 1360
SmiMI CAYNNNNRTG 4 cut(s) 90, 519, 567, 1055
SmlI CTYRAG 3 cut(s) 1562, 1994, 2234
SmoI CTYRAG 3 cut(s) 1562, 1994, 2234
SseBI AGGCCT 1 cut(s) 248
SsiI CCGC 5 cut(s) 271, 556, 1147, 1351, 2204
SspMI CTAG 3 cut(s) 132, 354, 2283
StuI AGGCCT 1 cut(s) 248
StyD4I CCNGG 5 cut(s) 311, 388, 422, 789, 1122
StyI CCWWGG 4 cut(s) 243, 733, 783, 1578
TaaI ACNGT 5 cut(s) 401, 895, 1828, 1963, 2023
TaqI TCGA 7 cut(s) 168, 225, 304, 1099, 1644, 2155, 2190
TaqII GACCGA 1 cut(s) 1268
TauI GCSGC 2 cut(s) 273, 1354
TfiI GAWTC 6 cut(s) 104, 227, 469, 1010, 1256, 1952
TscAI CASTG 5 cut(s) 280, 833, 1361, 1420, 1555
TseFI GTSAC 5 cut(s) 692, 1142, 1415, 1837, 1944
TseI GCWGC 5 cut(s) 158, 581, 751, 1592, 2063
Tsp45I GTSAC 5 cut(s) 692, 1142, 1415, 1837, 1944
TspGWI ACGGA 1 cut(s) 2275
TspRI CASTG 5 cut(s) 280, 833, 1361, 1420, 1555
Van91I CCANNNNNTGG 1 cut(s) 526
Vha464I CTTAAG 2 cut(s) 1562, 1994
VneI GTGCAC 2 cut(s) 1812, 2253
VpaK11BI GGWCC 3 cut(s) 729, 787, 1360
XagI CCTNNNNNAGG 2 cut(s) 951, 2057
XapI RAATTY 6 cut(s) 41, 221, 1238, 1625, 1712, 2028
XceI RCATGY 1 cut(s) 1925
XmiI GTMKAC 1 cut(s) 1368
XspI CTAG 3 cut(s) 132, 354, 2283
Zsp2I ATGCAT 1 cut(s) 1456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.