Rorug02G0059900

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000165
Physical Location & Seq
Forward (+)
4608474 .. 4611159
2686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0059900.1

Sequence Viewer

Length: 1872 bp
ATGGGTGTTGCTGCTCTAACCCAGAGACTATGCAACTTTGAAATCCGGAGACTGGTGTTGATAATCGGTGTGGCGGTTGTTATTGTAGTTGTGAATCAGTGTTTTGAGCTTCCTTATGGTAAAAGATTTTACTTTTCACCTGCTGATACTGGTTCAGCTTCAGTGGTCACATTGTTGGGTAATGTTACTGGTTCAAATGATTTGGAGTCTGGGAAGTTTGATGTTGTTGGTGTAGTGGGGATAGTGGTTAATAATACTGGTGGTTTAGAGTTGGAGGAAGATGCAAGTAATGTAACTGTTGAGAAGAGTTTTCCGGTGGGAATCAAAACAAGTGAAGATGATATATCTAGTGGGGAAAAGACAATAGATTTTAGACATGATTCTGTACCGAGGGACAGTAGAATAGGTGAGAGTTACAAGTTAGACAATGACTCTAAAACAAGCTCAGCGAGTGAATTTCAAAACGAAGCTGGGATTGTGTCGGTTGTATCTCAAGGAGCCGCTAGAAATAGTCCGGGAAACATTAATGCAGTTTCAAAGGGTAACATCGAACAAACTACTGATATTCAAGTGGAGGATAAGAAGACTGTGCCATTGCAATCTGTTTCGGCCACCTTGCATGATAATTCGTCAATGACTAGTATTTCAACACTAAGGAAGTGGAATCCACGACCAACATCAATATCCCAGATGAATTTGTTATTGCTTCGAACCCCCATTTCTTCTAGTTCTATGAACCCACGGCGGTATTCCACACGTGATCGTGAACTTCAATCTGTAAAACTGGAGCTTGAGAATGCTCCTATCATAAGGGACAATCCCGGGCTCAGTGCATCTATTTTCCGAAATCTTTCCAAATTTATAAGGAGTTATGACTTGATGGAGCAGAAGCTCAAAGTTTACGTTTATACGGAAGGTGAAAAGCCCATATTCCATCAGCCTTTGATGCGGGGGATTTATGCCTCAGAAGGATGGTTTATGAAACTAATAGAGGGAAATAAAAGATTTTCTGCGAGGGACCCCAGAAAAGCTCATTTGTTCTATTTACCCTTTGATTCGCATATGTTGAGGTTGAAACTTAATGGCACTGGTAAGCAGGGTCTAGAAAAGTATTTGAAGCGCTATGTTGGAGTAATTGCAAAAAAGTATCCATTTTGGAACAGAACAGGAGGAGCAGATCATTTTCTTGTTGCTTGCCATGACTGGGCCCCCAAGATCACAAGCAAGAACATGGGGAGTTGTATCAGATCTCTTTGCAATGCCAATGTTGCTAGAGACTTCAAAATTGGCAAGGACACCAGTCTACCTGTTACATATATACGTTCCGTGGAGGATCCTCTGGCAGATCTTGGAGGAAAACCTGCTTCCGAAAGATCTATTTTGGCCTTCTTTGCCGGGGGCATGCACGGCTATCTCCGACCAATTCTGCTACACTACTGGGAAAACAAAGAGCCAGACGTGAAAATCTTTGGCCCGATGCCACGAGATATTGAAAGCAAAAGACTTTACAGAGAATATATGAAGAGCAGCAAGTACTGCATCTGTGCCAGGGGTTATGAGGTACATACACCTCGAATAGTTGAGGCCATATTCCATGAGTGTGTGCCAGTCATCATATCAGATAACTATGTGCCTCCTTTCTTCGAGGTATTCAACTGGGAGGCATTTTCGGTTTTTATACAAGAAAAGGATATCCCTAACTTGAGAAACATTCTGCTTTCTATCCCGGATGAGAAGTACCTGATGATGAAATCGGAAGTAAAGATGGTGCAACAGCATTTCTTTTGGCACAAGAAACCTGTCAAGTATGACTTGTTTCATATGATACTTCATTCAGTTTGGTACAATAGAATTCTTCAGATAAAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

623

Amino Acids

70.63

Weight (kDa)

9.1

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 295 - 573 9.4e-64 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 863
AarI CACCTGC 1 cut(s) 148
Acc36I ACCTGC 2 cut(s) 148, 1369
AccI GTMKAC 1 cut(s) 1303
AccIII TCCGGA 1 cut(s) 45
AciI CCGC 4 cut(s) 74, 501, 745, 949
AclWI GGATC 2 cut(s) 1328, 1341
AcoI YGGCCR 1 cut(s) 609
AcsI RAATTY 4 cut(s) 455, 694, 857, 1851
AcuI CTGAAG 2 cut(s) 144, 1841
AcvI CACGTG 1 cut(s) 758
AfaI GTAC 5 cut(s) 387, 1535, 1563, 1739, 1844
AfeI AGCGCT 1 cut(s) 1121
AfiI CCNNNNNNNGG 2 cut(s) 52, 1204
AflIII ACRYGT 1 cut(s) 755
AhlI ACTAGT 1 cut(s) 638
AjiI CACGTC 1 cut(s) 1459
AjnI CCWGG 1 cut(s) 1547
AluBI AGCT 7 cut(s) 109, 158, 444, 470, 790, 892, 1031
AluI AGCT 7 cut(s) 109, 158, 444, 470, 790, 892, 1031
Alw26I GTCTC 3 cut(s) 19, 43, 1269
AlwI GGATC 2 cut(s) 1328, 1341
Ama87I CYCGRG 1 cut(s) 821
Aor13HI TCCGGA 1 cut(s) 45
Aor51HI AGCGCT 1 cut(s) 1121
AoxI GGCC 5 cut(s) 609, 1206, 1383, 1471, 1584
ApaI GGGCCC 1 cut(s) 1210
ApeKI GCWGC 2 cut(s) 11, 1527
ApoI RAATTY 4 cut(s) 455, 694, 857, 1851
AseI ATTAAT 1 cut(s) 525
Asp700I GAANNNNTTC 1 cut(s) 850
AspLEI GCGC 1 cut(s) 1122
AspS9I GGNCC 4 cut(s) 1018, 1206, 1207, 1472
AsuC2I CCSGG 5 cut(s) 516, 822, 823, 1396, 1727
AsuHPI GGTGA 3 cut(s) 129, 419, 929
AsuII TTCGAA 1 cut(s) 709
AvaI CYCGRG 1 cut(s) 821
AvaII GGWCC 1 cut(s) 1018
BaeGI GKGCMC 1 cut(s) 1210
BamHI GGATCC 1 cut(s) 1333
BanII GRGCYC 2 cut(s) 828, 1210
BauI CACGAG 1 cut(s) 1482
BbrPI CACGTG 1 cut(s) 758
BbsI GAAGAC 1 cut(s) 590
BbvI GCAGC 1 cut(s) 1539
BccI CCATC 4 cut(s) 874, 942, 966, 1759
BceAI ACGGC 2 cut(s) 758, 1423
BciT130I CCWGG 1 cut(s) 1549
BciVI GTATCC 1 cut(s) 1158
BcnI CCSGG 5 cut(s) 516, 822, 823, 1396, 1727
BcoDI GTCTC 3 cut(s) 19, 43, 1269
BcuI ACTAGT 1 cut(s) 638
BfaI CTAG 6 cut(s) 348, 504, 639, 726, 1103, 1272
BfoI RGCGCY 1 cut(s) 1123
BfuAI ACCTGC 2 cut(s) 148, 1369
BfuI GTATCC 1 cut(s) 1158
BglII AGATCT 3 cut(s) 1247, 1345, 1373
BisI GCNGC 3 cut(s) 12, 501, 1528
BlpI GCTNAGC 1 cut(s) 445
BlsI GCNGC 3 cut(s) 13, 502, 1529
BmcAI AGTACT 1 cut(s) 1535
Bme1390I CCNGG 6 cut(s) 516, 822, 823, 1396, 1549, 1727
Bme18I GGWCC 1 cut(s) 1018
BmeT110I CYCGRG 1 cut(s) 821
BmgBI CACGTC 1 cut(s) 1459
BmgT120I GGNCC 4 cut(s) 1018, 1206, 1207, 1472
BmiI GGNNCC 6 cut(s) 499, 1019, 1020, 1208, 1209, 1335
BmrFI CCNGG 6 cut(s) 516, 822, 823, 1396, 1549, 1727
BmrI ACTGGG 3 cut(s) 1213, 1447, 1666
BmsI GCATC 5 cut(s) 271, 842, 936, 1467, 1548
BmuI ACTGGG 3 cut(s) 1213, 1447, 1666
BoxI GACNNNNGTC 1 cut(s) 1299
BpiI GAAGAC 1 cut(s) 590
BpmI CTGGAG 1 cut(s) 806
Bpu1102I GCTNAGC 1 cut(s) 445
Bpu14I TTCGAA 1 cut(s) 709
BpuEI CTTGAG 3 cut(s) 477, 812, 1723
BpuMI CCSGG 5 cut(s) 516, 822, 823, 1396, 1727
BsaAI YACGTR 1 cut(s) 758
BsaJI CCNNGG 6 cut(s) 389, 740, 821, 1326, 1395, 1548
BsaWI WCCGGW 2 cut(s) 45, 313
Bsc4I CCNNNNNNNGG 2 cut(s) 52, 1204
Bse3DI GCAATG 2 cut(s) 593, 1264
BseAI TCCGGA 1 cut(s) 45
BseBI CCWGG 1 cut(s) 1549
BseDI CCNNGG 6 cut(s) 389, 740, 821, 1326, 1395, 1548
BseGI GGATG 2 cut(s) 977, 1735
BseLI CCNNNNNNNGG 2 cut(s) 52, 1204
BseMI GCAATG 2 cut(s) 593, 1264
BseMII CTCAG 3 cut(s) 459, 841, 978
BseRI GAGGAG 1 cut(s) 1185
BseSI GKGCMC 1 cut(s) 1210
BseXI GCAGC 1 cut(s) 1539
BseYI CCCAGC 1 cut(s) 470
BshFI GGCC 5 cut(s) 611, 1208, 1385, 1473, 1586
BsiHKCI CYCGRG 1 cut(s) 821
BsiSI CCGG 6 cut(s) 46, 314, 515, 822, 1395, 1727
BslFI GGGAC 3 cut(s) 407, 827, 1031
BslI CCNNNNNNNGG 2 cut(s) 52, 1204
BsmAI GTCTC 3 cut(s) 19, 43, 1269
BsmFI GGGAC 3 cut(s) 407, 827, 1031
BsmI GAATGC 1 cut(s) 802
BsnI GGCC 5 cut(s) 611, 1208, 1385, 1473, 1586
BsoBI CYCGRG 1 cut(s) 821
Bsp119I TTCGAA 1 cut(s) 709
Bsp120I GGGCCC 1 cut(s) 1206
Bsp1286I GDGCHC 2 cut(s) 828, 1210
Bsp13I TCCGGA 1 cut(s) 45
Bsp143I GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
Bsp1720I GCTNAGC 1 cut(s) 445
BspACI CCGC 4 cut(s) 74, 501, 745, 949
BspANI GGCC 5 cut(s) 611, 1208, 1385, 1473, 1586
BspCNI CTCAG 3 cut(s) 458, 840, 977
BspEI TCCGGA 1 cut(s) 45
BspLI GGNNCC 6 cut(s) 499, 1019, 1020, 1208, 1209, 1335
BspMI ACCTGC 2 cut(s) 148, 1369
BspPI GGATC 2 cut(s) 1328, 1341
BspQI GCTCTTC 1 cut(s) 1517
BspT104I TTCGAA 1 cut(s) 709
BsrDI GCAATG 2 cut(s) 593, 1264
BssECI CCNNGG 6 cut(s) 389, 740, 821, 1326, 1395, 1548
BssMI GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
BssSI CACGAG 1 cut(s) 1482
Bst2BI CACGAG 1 cut(s) 1482
Bst2UI CCWGG 1 cut(s) 1549
Bst4CI ACNGT 3 cut(s) 298, 398, 589
Bst6I CTCTTC 2 cut(s) 299, 1517
BstAPI GCANNNNNTGC 1 cut(s) 1536
BstBAI YACGTR 1 cut(s) 758
BstBI TTCGAA 1 cut(s) 709
BstC8I GCNNGC 2 cut(s) 1195, 1403
BstDEI CTNAG 4 cut(s) 445, 653, 827, 964
BstDSI CCRYGG 2 cut(s) 740, 1326
BstF5I GGATG 2 cut(s) 977, 1735
BstH2I RGCGCY 1 cut(s) 1123
BstHHI GCGC 1 cut(s) 1122
BstKTI GATC 7 cut(s) 763, 1180, 1218, 1250, 1336, 1348, 1376
BstMAI GTCTC 3 cut(s) 19, 43, 1269
BstMBI GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
BstMWI GCNNNNNNNGC 5 cut(s) 946, 1268, 1391, 1407, 1536
BstNI CCWGG 1 cut(s) 1549
BstNSI RCATGY 1 cut(s) 1405
BstPAI GACNNNNGTC 1 cut(s) 1299
BstSCI CCNGG 6 cut(s) 514, 820, 821, 1394, 1547, 1725
BstSLI GKGCMC 1 cut(s) 1210
BstV1I GCAGC 1 cut(s) 1539
BstV2I GAAGAC 1 cut(s) 590
BstX2I RGATCY 4 cut(s) 1247, 1333, 1345, 1373
BstYI RGATCY 4 cut(s) 1247, 1333, 1345, 1373
BsuI GTATCC 1 cut(s) 1158
BsuRI GGCC 5 cut(s) 611, 1208, 1385, 1473, 1586
BtgI CCRYGG 2 cut(s) 740, 1326
BtrI CACGTC 1 cut(s) 1459
BtsCI GGATG 2 cut(s) 977, 1735
BtsIMutI CAGTG 4 cut(s) 104, 168, 835, 1086
BveI ACCTGC 2 cut(s) 148, 1369
Cac8I GCNNGC 2 cut(s) 1195, 1403
CfoI GCGC 1 cut(s) 1122
Cfr13I GGNCC 4 cut(s) 1018, 1206, 1207, 1472
Cfr9I CCCGGG 1 cut(s) 821
Csp6I GTAC 5 cut(s) 386, 1534, 1562, 1738, 1843
CviAII CATG 6 cut(s) 377, 620, 1199, 1231, 1402, 1595
CviQI GTAC 5 cut(s) 386, 1534, 1562, 1738, 1843
DdeI CTNAG 4 cut(s) 445, 653, 827, 964
DpnI GATC 7 cut(s) 762, 1179, 1217, 1249, 1335, 1347, 1375
DpnII GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
EaeI YGGCCR 1 cut(s) 609
Eam1104I CTCTTC 2 cut(s) 299, 1517
EarI CTCTTC 2 cut(s) 299, 1517
Eco24I GRGCYC 2 cut(s) 828, 1210
Eco32I GATATC 1 cut(s) 1693
Eco47I GGWCC 1 cut(s) 1018
Eco47III AGCGCT 1 cut(s) 1121
Eco57I CTGAAG 2 cut(s) 144, 1841
Eco72I CACGTG 1 cut(s) 758
Eco88I CYCGRG 1 cut(s) 821
EcoO109I RGGNCCY 2 cut(s) 1018, 1207
EcoRI GAATTC 1 cut(s) 1851
EcoRII CCWGG 1 cut(s) 1547
EcoRV GATATC 1 cut(s) 1693
EcoT38I GRGCYC 2 cut(s) 828, 1210
FaeI CATG 6 cut(s) 380, 623, 1202, 1234, 1405, 1598
FalI AAGNNNNNCTT 2 cut(s) 1796, 1828
FaqI GGGAC 3 cut(s) 407, 827, 1031
FatI CATG 6 cut(s) 376, 619, 1198, 1230, 1401, 1594
FauI CCCGC 1 cut(s) 942
FauNDI CATATG 2 cut(s) 1062, 1821
FblI GTMKAC 1 cut(s) 1303
Fnu4HI GCNGC 3 cut(s) 12, 501, 1528
FokI GGATG 2 cut(s) 984, 1742
FriOI GRGCYC 2 cut(s) 828, 1210
Fsp4HI GCNGC 3 cut(s) 12, 501, 1528
FspBI CTAG 6 cut(s) 348, 504, 639, 726, 1103, 1272
GlaI GCGC 1 cut(s) 1121
GluI GCNGC 3 cut(s) 12, 501, 1528
GsaI CCCAGC 1 cut(s) 474
GsuI CTGGAG 1 cut(s) 806
HaeII RGCGCY 1 cut(s) 1123
HaeIII GGCC 5 cut(s) 611, 1208, 1385, 1473, 1586
HapII CCGG 6 cut(s) 46, 314, 515, 822, 1395, 1727
HhaI GCGC 1 cut(s) 1122
Hin1II CATG 6 cut(s) 380, 623, 1202, 1234, 1405, 1598
Hin6I GCGC 1 cut(s) 1120
HinP1I GCGC 1 cut(s) 1120
HinfI GANTC 7 cut(s) 94, 206, 321, 380, 431, 664, 1055
HpaII CCGG 6 cut(s) 46, 314, 515, 822, 1395, 1727
HphI GGTGA 3 cut(s) 129, 419, 929
Hpy166II GTNNAC 3 cut(s) 767, 901, 1304
Hpy188I TCNGA 8 cut(s) 845, 967, 1247, 1369, 1418, 1621, 1756, 1860
Hpy188III TCNNGA 3 cut(s) 46, 764, 1103
Hpy8I GTNNAC 3 cut(s) 767, 901, 1304
HpyAV CCTTC 3 cut(s) 908, 962, 1396
HpyCH4III ACNGT 3 cut(s) 298, 398, 589
HpyCH4IV ACGT 4 cut(s) 757, 903, 1321, 1458
HpyF10VI GCNNNNNNNGC 5 cut(s) 946, 1268, 1391, 1407, 1536
HpyF3I CTNAG 4 cut(s) 445, 653, 827, 964
HpySE526I ACGT 4 cut(s) 757, 903, 1321, 1458
Hsp92II CATG 6 cut(s) 380, 623, 1202, 1234, 1405, 1598
HspAI GCGC 1 cut(s) 1120
KflI GGGWCCC 1 cut(s) 1018
Kpn2I TCCGGA 1 cut(s) 45
Kzo9I GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
LguI GCTCTTC 1 cut(s) 1517
LmnI GCTCC 5 cut(s) 497, 787, 805, 883, 1172
Lsp1109I GCAGC 1 cut(s) 1539
LweI GCATC 5 cut(s) 271, 842, 936, 1467, 1548
MaeI CTAG 6 cut(s) 348, 504, 639, 726, 1103, 1272
MaeII ACGT 4 cut(s) 757, 903, 1321, 1458
MaeIII GTNAC 6 cut(s) 166, 184, 292, 413, 542, 1309
MalI GATC 7 cut(s) 762, 1179, 1217, 1249, 1335, 1347, 1375
MboI GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
MboII GAAGA 8 cut(s) 290, 316, 347, 595, 714, 1534, 1633, 1847
MflI RGATCY 4 cut(s) 1247, 1333, 1345, 1373
MhlI GDGCHC 2 cut(s) 828, 1210
MluCI AATT 8 cut(s) 455, 625, 694, 857, 1134, 1284, 1422, 1851
MlyI GAGTC 2 cut(s) 215, 425
MmeI TCCRAC 3 cut(s) 252, 1108, 1441
MroI TCCGGA 1 cut(s) 45
MroXI GAANNNNTTC 1 cut(s) 850
MseI TTAA 3 cut(s) 249, 525, 1080
MslI CAYNNNNRTG 1 cut(s) 1599
MspI CCGG 6 cut(s) 46, 314, 515, 822, 1395, 1727
MspR9I CCNGG 6 cut(s) 516, 822, 823, 1396, 1549, 1727
Mva1269I GAATGC 1 cut(s) 802
MvaI CCWGG 1 cut(s) 1549
MwoI GCNNNNNNNGC 5 cut(s) 946, 1268, 1391, 1407, 1536
NciI CCSGG 5 cut(s) 516, 822, 823, 1396, 1727
NdeI CATATG 2 cut(s) 1062, 1821
NdeII GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
NlaIII CATG 6 cut(s) 380, 623, 1202, 1234, 1405, 1598
NlaIV GGNNCC 6 cut(s) 499, 1019, 1020, 1208, 1209, 1335
NmuCI GTSAC 1 cut(s) 166
NspI RCATGY 1 cut(s) 1405
NspV TTCGAA 1 cut(s) 709
PaeI GCATGC 1 cut(s) 1405
PaqCI CACCTGC 1 cut(s) 148
PciSI GCTCTTC 1 cut(s) 1517
PctI GAATGC 1 cut(s) 802
PdmI GAANNNNTTC 1 cut(s) 850
PfeI GAWTC 5 cut(s) 94, 321, 380, 664, 1055
PfoI TCCNGGA 2 cut(s) 514, 1725
PkrI GCNGC 3 cut(s) 13, 502, 1529
PleI GAGTC 2 cut(s) 214, 425
PmaCI CACGTG 1 cut(s) 758
PmlI CACGTG 1 cut(s) 758
PpsI GAGTC 2 cut(s) 214, 425
Ppu21I YACGTR 1 cut(s) 758
PpuMI RGGWCCY 1 cut(s) 1018
PshAI GACNNNNGTC 1 cut(s) 1299
PshBI ATTAAT 1 cut(s) 525
PsiI TTATAA 1 cut(s) 863
Psp5II RGGWCCY 1 cut(s) 1018
Psp6I CCWGG 1 cut(s) 1547
PspCI CACGTG 1 cut(s) 758
PspFI CCCAGC 1 cut(s) 470
PspGI CCWGG 1 cut(s) 1547
PspN4I GGNNCC 6 cut(s) 499, 1019, 1020, 1208, 1209, 1335
PspOMI GGGCCC 1 cut(s) 1206
PspPI GGNCC 4 cut(s) 1018, 1206, 1207, 1472
PspPPI RGGWCCY 1 cut(s) 1018
PsuI RGATCY 4 cut(s) 1247, 1333, 1345, 1373
RsaI GTAC 5 cut(s) 387, 1535, 1563, 1739, 1844
RsaNI GTAC 5 cut(s) 386, 1534, 1562, 1738, 1843
RseI CAYNNNNRTG 1 cut(s) 1599
SapI GCTCTTC 1 cut(s) 1517
SaqAI TTAA 3 cut(s) 249, 525, 1080
SatI GCNGC 3 cut(s) 12, 501, 1528
Sau3AI GATC 7 cut(s) 760, 1177, 1215, 1247, 1333, 1345, 1373
Sau96I GGNCC 4 cut(s) 1018, 1206, 1207, 1472
ScaI AGTACT 1 cut(s) 1535
SchI GAGTC 2 cut(s) 215, 425
ScrFI CCNGG 6 cut(s) 516, 822, 823, 1396, 1549, 1727
SduI GDGCHC 2 cut(s) 828, 1210
SfaNI GCATC 5 cut(s) 271, 842, 936, 1467, 1548
SfuI TTCGAA 1 cut(s) 709
SinI GGWCC 1 cut(s) 1018
SmaI CCCGGG 1 cut(s) 823
SmiMI CAYNNNNRTG 1 cut(s) 1599
SmlI CTYRAG 3 cut(s) 492, 791, 1702
SmoI CTYRAG 3 cut(s) 492, 791, 1702
SpeI ACTAGT 1 cut(s) 638
SphI GCATGC 1 cut(s) 1405
Sse9I AATT 8 cut(s) 455, 625, 694, 857, 1134, 1284, 1422, 1851
SsiI CCGC 4 cut(s) 74, 501, 745, 949
SspMI CTAG 6 cut(s) 348, 504, 639, 726, 1103, 1272
StyD4I CCNGG 6 cut(s) 514, 820, 821, 1394, 1547, 1725
TaaI ACNGT 3 cut(s) 298, 398, 589
TaiI ACGT 4 cut(s) 760, 906, 1324, 1461
TaqI TCGA 4 cut(s) 549, 709, 1573, 1644
TasI AATT 8 cut(s) 455, 625, 694, 857, 1134, 1284, 1422, 1851
TatI WGTACW 1 cut(s) 1533
TauI GCSGC 1 cut(s) 503
TfiI GAWTC 5 cut(s) 94, 321, 380, 664, 1055
Tru1I TTAA 3 cut(s) 249, 525, 1080
Tru9I TTAA 3 cut(s) 249, 525, 1080
TscAI CASTG 4 cut(s) 104, 168, 835, 1093
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 2 cut(s) 11, 1527
Tsp45I GTSAC 1 cut(s) 166
TspDTI ATGAA 7 cut(s) 707, 749, 995, 1535, 1763, 1808, 1820
TspGWI ACGGA 2 cut(s) 926, 1315
TspMI CCCGGG 1 cut(s) 821
TspRI CASTG 4 cut(s) 104, 168, 835, 1093
VpaK11BI GGWCC 1 cut(s) 1018
VspI ATTAAT 1 cut(s) 525
XapI RAATTY 4 cut(s) 455, 694, 857, 1851
XbaI TCTAGA 1 cut(s) 1102
XceI RCATGY 1 cut(s) 1405
XmaI CCCGGG 1 cut(s) 821
XmiI GTMKAC 1 cut(s) 1303
XmnI GAANNNNTTC 1 cut(s) 850
XspI CTAG 6 cut(s) 348, 504, 639, 726, 1103, 1272
ZrmI AGTACT 1 cut(s) 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.