MD05G1144600.v1.1

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000165
Physical Location & Seq
Forward (+)
27621704 .. 27625787
4084 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1144600.v1.1.491

Sequence Viewer

Length: 2250 bp
ATGGATAACGAGGTGATTGAGTTTGATATTGGGCTGGGAGGAGGGGGAGGCCGGGATGGGGAAGATGATTTTGTAGACATTGAGCATCCTGTCGATGATGAGGAAATGGTTGATAGTCCTCTTCTGGGGAGTGGCACTGGCAGTGGCAGTGGTATTGTTTTCGGTGGTGGAGGGAGTGGTGAAATTTACTTTCCTGAGGGGGATCTCTTGGACCTCGAGCCATATGACGGCATGGAATTTGAGTCCGAAGAGGCTGCCAAGGCCTTTTACAATTCGTATGCACGGCGTGTTGGGTTCAGTACTCGTGTCAGCTCCTCACGTCGTTCCAGGCGCGATGGAGCAATCATACAGAGGCAGTTTGTTTGTGCTAAAGAGGGTTTCCGGAATTTGAATGAGAAGCGCACCAAGGATAGGGAGATTAAGCGCCCTCGGACTATCACTAGAGTAGGGTGCAAAGCATCCTTGTCTGTAAAGATGCAAGATTCGGGGAAATGGGTGGTGTCTGGTTTTGTTAAGGAGCATAATCATGAGTTGGTTCCGCCAGATCAGGTGCATTGTCTTCGTTCTCATAGGCAAATATCCGGTCCTGCCAAGACATTGATTGATACCTTGCAGGCTGCTGGAATGGGTCCCAGGAGGATTATGTCAGCGCTGATTAAGGAATATGATGGGGACATTCAGATGCTTTTGGATTACTTGAGACAAATGCAAGCTGATAGCCACAACTTTTTCTATGCTGTGCAGGGCGATGACGATCAGTCCATGGGAAATGTTATTTGGGCTGATCCAAAGGCAAGGATGAACTATAGTTATTTTGGTGATACTGTTACTTTTGACACTACCTACAGGTCTAACAGGTACCGTTTGCCCTTTGCACCTTTCACAGGGGTGAACCATCATGGTCAGCCTGTTTTGTTTGGTTGTGCCTTTCTGATAAATGAATCTGAAGCATCATTCGTTTGGCTGTTCAAAACATGGCTTATGGCAATGTCAGGCCGGCCCCCAGTGTCAATTACCACTGATCATGATCCTGTGATACAGTCAGCCATCACGCAGGTTTTCCCGCAGACCCGGCTCCGTTTCTGCAAATGGCACATCTTTAAGAAATGTCAGGAGAAGCTATCCCATGTGTTTCTTAAACATCCAACCTTTGAAGCAGACTTTCACAAATACAACCTCAGAGATCATGAATGGATTCAAATGGTATACTCTGCTCGCAGGCAGTGGGTCCCTGTATATCTGCGGGACACTTTTTTTGCAGAAATGTCCATTACTCAGAGAAGCGACAGTATTAACTCATATTTTGATGGATATGTGAATGCTTCAACAAATTTGAATCAGTTCTTTAAGCTTTATGAGAAAGCTCTAGAGAGTCGAAATGAGAAGGAAGTGAAAGCAGATTTTGAAACTATGAACACTGCCCCAGTTTTGAAAACCCCATCTCCAATGGAAAAGCAAGCATCCGAGCTTTATACAAAAAAGATATTTATGAGGTTTCAAGAGGAGTTAGTTGGAACGCTAACTCTCACGGCATCTAAGGGTGATGATGATGGGGAGATCATCACATATCAAGTAGCAAAGTTTGGGGAGGACCATAAAGCATACTTTGTTAAGTTTAATGTTTTGGAGATGATGGCAGCTTGTAGTTGCCAGATGTTTGAGTTCTCAGGTCTTCTTTGCAGACATGTATTGGCAGTCTTTAGAGTGACCAATGTGCTGACTCTCCCATCCCATTACATATTGAAACGATGGACTAGAAATGCCAAGAGCAGTGTCATGTTAGAAGAACGTTCTAGTGATGTATATACCAATTATCTAGAATCTCATACTGTTCGGTTCAATACCCTACGTCACGAGGCCTTTAAATTTGTAGATGGAGCAAGGTCTTCAGAAACTTATGACATTACAGTGGAAGCTTTGAAAGAAGCTGCAAAGAAAGTTGCTCATGCAACAAAGCATGAGGGGAAATCCATGGTCAATGGGCATGTCAGGGGGAACTTGGCTAGTGGGGCAAGTCAGGCAGCACGTTGTGCTAGTGGGGATCATGAAGGAAGTTCTGGCCAACACTTGTCTGAGGATGATATGGACAAAAAAATTCGAGAACTTACGAATGAGCTGGAGTGCGCAAATCGGAAATGTGAAGTTTATCGGGCTAACCTGCTTTCAGTTTTGAAAGATATAGAGGATCATAAGTCACAATTGTCAATTAAAGTACAAAACATTAAAATTGGCATGAAAGACGGCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

750

Amino Acids

85.04

Weight (kDa)

6.36

Isoelectric Point (pI)

43.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 89 - 180 7.3e-34 FAR1 DNA-binding domain
MULE PF10551 276 - 369 1.4e-29 MULE transposase domain
SWIM PF04434 543 - 568 6.7e-09 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2125
Acc36I ACCTGC 2 cut(s) 1045, 2166
Acc65I GGTACC 1 cut(s) 858
AccB1I GGYRCC 1 cut(s) 858
AccI GTMKAC 2 cut(s) 75, 1206
AccII CGCG 1 cut(s) 333
AccIII TCCGGA 1 cut(s) 381
AciI CCGC 3 cut(s) 539, 1064, 1243
AclI AACGTT 1 cut(s) 1789
AclWI GGATC 5 cut(s) 210, 779, 1022, 2049, 2193
AcoI YGGCCR 1 cut(s) 2059
AcsI RAATTY 6 cut(s) 183, 236, 385, 1330, 1865, 2094
AcuI CTGAAG 2 cut(s) 966, 1872
AdeI CACNNNGTG 2 cut(s) 287, 2030
AfaI GTAC 3 cut(s) 301, 860, 2214
AfeI AGCGCT 1 cut(s) 651
AfiI CCNNNNNNNGG 5 cut(s) 58, 125, 227, 411, 884
AflIII ACRYGT 1 cut(s) 1684
AhdI GACNNNNNGTC 1 cut(s) 757
AjiI CACGTC 1 cut(s) 320
AjnI CCWGG 2 cut(s) 326, 632
AjuI GAANNNNNNNTTGG 2 cut(s) 760, 792
AleI CACNNNNGTG 1 cut(s) 887
Alw26I GTCTC 1 cut(s) 694
AlwI GGATC 5 cut(s) 210, 779, 1022, 2049, 2193
Ama87I CYCGRG 1 cut(s) 215
Aor13HI TCCGGA 1 cut(s) 381
Aor51HI AGCGCT 1 cut(s) 651
AoxI GGCC 7 cut(s) 49, 261, 994, 998, 1857, 2059, 2242
ApeKI GCWGC 5 cut(s) 254, 617, 1637, 1928, 2021
ApoI RAATTY 6 cut(s) 183, 236, 385, 1330, 1865, 2094
ArsI GACNNNNNNTTYG 4 cut(s) 568, 600, 1238, 1270
Asp700I GAANNNNTTC 2 cut(s) 1194, 1340
Asp718I GGTACC 1 cut(s) 858
AspLEI GCGC 5 cut(s) 333, 402, 426, 652, 2126
AspS9I GGNCC 6 cut(s) 211, 584, 629, 999, 1228, 1591
AsuC2I CCSGG 2 cut(s) 53, 1072
AsuHPI GGTGA 5 cut(s) 25, 191, 830, 901, 1553
AvaI CYCGRG 1 cut(s) 215
AvaII GGWCC 5 cut(s) 211, 584, 629, 1228, 1591
AxyI CCTNAGG 1 cut(s) 195
BalI TGGCCA 1 cut(s) 2061
BanI GGYRCC 1 cut(s) 858
BauI CACGAG 2 cut(s) 303, 1853
BbsI GAAGAC 3 cut(s) 551, 1664, 1878
BbvI GCAGC 5 cut(s) 241, 604, 1649, 1915, 2033
BceAI ACGGC 3 cut(s) 244, 299, 1545
BcgI CGANNNNNNTGC 4 cut(s) 236, 270, 542, 576
BciT130I CCWGG 2 cut(s) 328, 634
BclI TGATCA 1 cut(s) 1021
BcnI CCSGG 2 cut(s) 53, 1072
BcoDI GTCTC 1 cut(s) 694
BfaI CTAG 7 cut(s) 441, 1367, 1755, 1794, 1817, 2004, 2034
BfmI CTRYAG 2 cut(s) 805, 844
BfoI RGCGCY 2 cut(s) 427, 653
BfuAI ACCTGC 2 cut(s) 1045, 2166
BisI GCNGC 5 cut(s) 255, 618, 1638, 1929, 2022
BlsI GCNGC 5 cut(s) 256, 619, 1639, 1930, 2023
BmcAI AGTACT 1 cut(s) 301
Bme1390I CCNGG 4 cut(s) 53, 328, 634, 1072
Bme18I GGWCC 5 cut(s) 211, 584, 629, 1228, 1591
BmeRI GACNNNNNGTC 1 cut(s) 757
BmeT110I CYCGRG 1 cut(s) 215
BmgBI CACGTC 1 cut(s) 320
BmgT120I GGNCC 6 cut(s) 211, 584, 629, 999, 1228, 1591
BmiI GGNNCC 8 cut(s) 537, 630, 631, 860, 1001, 1076, 1229, 1230
BmrFI CCNGG 4 cut(s) 53, 328, 634, 1072
BmrI ACTGGG 2 cut(s) 998, 1418
BmsI GCATC 7 cut(s) 94, 465, 467, 672, 959, 1469, 1541
BmuI ACTGGG 2 cut(s) 998, 1418
BpiI GAAGAC 3 cut(s) 551, 1664, 1878
BpmI CTGGAG 1 cut(s) 2138
BpuEI CTTGAG 1 cut(s) 718
BpuMI CCSGG 2 cut(s) 53, 1072
BsaBI GATNNNNATC 2 cut(s) 753, 1026
BsaJI CCNNGG 6 cut(s) 258, 405, 428, 632, 762, 1971
BsaWI WCCGGW 2 cut(s) 381, 581
BsaXI ACNNNNNCTCC 2 cut(s) 1426, 1456
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 125, 227, 411, 884
Bse118I RCCGGY 1 cut(s) 996
Bse1I ACTGG 3 cut(s) 142, 1004, 1424
Bse21I CCTNAGG 1 cut(s) 195
Bse3DI GCAATG 1 cut(s) 993
Bse8I GATNNNNATC 2 cut(s) 753, 1026
BseAI TCCGGA 1 cut(s) 381
BseBI CCWGG 2 cut(s) 328, 634
BseDI CCNNGG 6 cut(s) 258, 405, 428, 632, 762, 1971
BseGI GGATG 8 cut(s) 61, 85, 458, 804, 1141, 1460, 1727, 2083
BseJI GATNNNNATC 2 cut(s) 753, 1026
BseLI CCNNNNNNNGG 5 cut(s) 58, 125, 227, 411, 884
BseMI GCAATG 1 cut(s) 993
BseMII CTCAG 5 cut(s) 186, 1192, 1289, 1680, 2064
BseNI ACTGG 3 cut(s) 142, 1004, 1424
BseRI GAGGAG 3 cut(s) 54, 304, 1517
BseXI GCAGC 5 cut(s) 241, 604, 1649, 1915, 2033
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 761
Bsh1236I CGCG 1 cut(s) 333
BshFI GGCC 7 cut(s) 51, 263, 996, 1000, 1859, 2061, 2244
BshNI GGYRCC 1 cut(s) 858
BsiHKCI CYCGRG 1 cut(s) 215
BsiSI CCGG 5 cut(s) 52, 382, 582, 997, 1072
BslFI GGGAC 4 cut(s) 615, 686, 1214, 1259
BslI CCNNNNNNNGG 5 cut(s) 58, 125, 227, 411, 884
BsmAI GTCTC 1 cut(s) 694
BsmFI GGGAC 4 cut(s) 615, 686, 1214, 1259
BsmI GAATGC 1 cut(s) 1324
BsnI GGCC 7 cut(s) 51, 263, 996, 1000, 1859, 2061, 2244
BsoBI CYCGRG 1 cut(s) 215
Bsp13I TCCGGA 1 cut(s) 381
Bsp19I CCATGG 2 cut(s) 762, 1971
BspACI CCGC 3 cut(s) 539, 1064, 1243
BspANI GGCC 7 cut(s) 51, 263, 996, 1000, 1859, 2061, 2244
BspCNI CTCAG 5 cut(s) 187, 1191, 1288, 1679, 2065
BspEI TCCGGA 1 cut(s) 381
BspFNI CGCG 1 cut(s) 333
BspHI TCATGA 4 cut(s) 526, 1024, 1186, 2044
BspLI GGNNCC 8 cut(s) 537, 630, 631, 860, 1001, 1076, 1229, 1230
BspMI ACCTGC 2 cut(s) 1045, 2166
BspPI GGATC 5 cut(s) 210, 779, 1022, 2049, 2193
BspT107I GGYRCC 1 cut(s) 858
BsrDI GCAATG 1 cut(s) 993
BsrFI RCCGGY 1 cut(s) 996
BsrI ACTGG 3 cut(s) 142, 1004, 1424
BssAI RCCGGY 1 cut(s) 996
BssECI CCNNGG 6 cut(s) 258, 405, 428, 632, 762, 1971
BssNAI GTATAC 1 cut(s) 1207
BssSI CACGAG 2 cut(s) 303, 1853
BssT1I CCWWGG 4 cut(s) 258, 405, 762, 1971
Bst1107I GTATAC 1 cut(s) 1207
Bst2BI CACGAG 2 cut(s) 303, 1853
Bst2UI CCWGG 2 cut(s) 328, 634
Bst4CI ACNGT 6 cut(s) 826, 863, 1041, 1289, 1831, 1909
Bst6I CTCTTC 2 cut(s) 126, 243
BstAPI GCANNNNNTGC 1 cut(s) 2030
BstC8I GCNNGC 6 cut(s) 615, 711, 998, 1216, 1220, 1458
BstDEI CTNAG 6 cut(s) 195, 1178, 1275, 1536, 1666, 2073
BstDSI CCRYGG 2 cut(s) 762, 1971
BstENI CCTNNNNNAGG 1 cut(s) 882
BstF5I GGATG 8 cut(s) 61, 85, 458, 804, 1141, 1460, 1727, 2083
BstFNI CGCG 1 cut(s) 333
BstH2I RGCGCY 2 cut(s) 427, 653
BstHHI GCGC 5 cut(s) 333, 402, 426, 652, 2126
BstMAI GTCTC 1 cut(s) 694
BstMWI GCNNNNNNNGC 5 cut(s) 260, 1072, 2009, 2018, 2030
BstNI CCWGG 2 cut(s) 328, 634
BstNSI RCATGY 2 cut(s) 1688, 1988
BstSCI CCNGG 4 cut(s) 51, 326, 632, 1070
BstSFI CTRYAG 2 cut(s) 805, 844
BstUI CGCG 1 cut(s) 333
BstV1I GCAGC 5 cut(s) 241, 604, 1649, 1915, 2033
BstV2I GAAGAC 3 cut(s) 551, 1664, 1878
BstX2I RGATCY 1 cut(s) 202
BstYI RGATCY 1 cut(s) 202
BstZ17I GTATAC 1 cut(s) 1207
Bsu36I CCTNAGG 1 cut(s) 195
BsuRI GGCC 7 cut(s) 51, 263, 996, 1000, 1859, 2061, 2244
BtgI CCRYGG 2 cut(s) 762, 1971
BtgZI GCGATG 2 cut(s) 348, 762
BtrI CACGTC 1 cut(s) 320
BtsCI GGATG 8 cut(s) 61, 85, 458, 804, 1141, 1460, 1727, 2083
BtsI GCAGTG 5 cut(s) 148, 154, 1229, 1416, 1777
BtsIMutI CAGTG 9 cut(s) 135, 148, 154, 1011, 1017, 1229, 1416, 1777, 1914
BveI ACCTGC 2 cut(s) 1045, 2166
Cac8I GCNNGC 6 cut(s) 615, 711, 998, 1216, 1220, 1458
CciI TCATGA 4 cut(s) 526, 1024, 1186, 2044
CfoI GCGC 5 cut(s) 333, 402, 426, 652, 2126
Cfr10I RCCGGY 1 cut(s) 996
Cfr13I GGNCC 6 cut(s) 211, 584, 629, 999, 1228, 1591
Csp6I GTAC 3 cut(s) 300, 859, 2213
CviQI GTAC 3 cut(s) 300, 859, 2213
DdeI CTNAG 6 cut(s) 195, 1178, 1275, 1536, 1666, 2073
DraI TTTAAA 1 cut(s) 1864
DraIII CACNNNGTG 2 cut(s) 287, 2030
DriI GACNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 2059
Eam1104I CTCTTC 2 cut(s) 126, 243
Eam1105I GACNNNNNGTC 1 cut(s) 757
EarI CTCTTC 2 cut(s) 126, 243
EciI GGCGGA 1 cut(s) 528
Eco130I CCWWGG 4 cut(s) 258, 405, 762, 1971
Eco147I AGGCCT 2 cut(s) 263, 1859
Eco47I GGWCC 5 cut(s) 211, 584, 629, 1228, 1591
Eco47III AGCGCT 1 cut(s) 651
Eco57I CTGAAG 2 cut(s) 966, 1872
Eco81I CCTNAGG 1 cut(s) 195
Eco88I CYCGRG 1 cut(s) 215
EcoNI CCTNNNNNAGG 1 cut(s) 882
EcoO109I RGGNCCY 2 cut(s) 629, 1228
EcoRII CCWGG 2 cut(s) 326, 632
EcoT14I CCWWGG 4 cut(s) 258, 405, 762, 1971
ErhI CCWWGG 4 cut(s) 258, 405, 762, 1971
FaqI GGGAC 4 cut(s) 615, 686, 1214, 1259
FauI CCCGC 2 cut(s) 1071, 1236
FauNDI CATATG 1 cut(s) 223
FbaI TGATCA 1 cut(s) 1021
FblI GTMKAC 2 cut(s) 75, 1206
Fnu4HI GCNGC 5 cut(s) 255, 618, 1638, 1929, 2022
FokI GGATG 8 cut(s) 68, 72, 445, 811, 1128, 1447, 1714, 2090
FseI GGCCGGCC 1 cut(s) 1000
Fsp4HI GCNGC 5 cut(s) 255, 618, 1638, 1929, 2022
FspBI CTAG 7 cut(s) 441, 1367, 1755, 1794, 1817, 2004, 2034
FspI TGCGCA 1 cut(s) 2125
GlaI GCGC 5 cut(s) 332, 401, 425, 651, 2125
GluI GCNGC 5 cut(s) 255, 618, 1638, 1929, 2022
GsaI CCCAGC 1 cut(s) 38
GsuI CTGGAG 1 cut(s) 2138
HaeII RGCGCY 2 cut(s) 427, 653
HaeIII GGCC 7 cut(s) 51, 263, 996, 1000, 1859, 2061, 2244
HapII CCGG 5 cut(s) 52, 382, 582, 997, 1072
HhaI GCGC 5 cut(s) 333, 402, 426, 652, 2126
Hin6I GCGC 5 cut(s) 331, 400, 424, 650, 2124
HinP1I GCGC 5 cut(s) 331, 400, 424, 650, 2124
HindIII AAGCTT 2 cut(s) 1349, 1914
HinfI GANTC 8 cut(s) 242, 482, 941, 1195, 1336, 1372, 1720, 1820
HpaII CCGG 5 cut(s) 52, 382, 582, 997, 1072
HphI GGTGA 5 cut(s) 25, 191, 830, 901, 1553
Hpy166II GTNNAC 3 cut(s) 76, 892, 1207
Hpy8I GTNNAC 3 cut(s) 76, 892, 1207
Hpy99I CGWCG 1 cut(s) 324
HpyAV CCTTC 2 cut(s) 1378, 2042
HpyCH4III ACNGT 6 cut(s) 826, 863, 1041, 1289, 1831, 1909
HpyCH4IV ACGT 4 cut(s) 319, 1789, 1849, 2026
HpyF10VI GCNNNNNNNGC 5 cut(s) 260, 1072, 2009, 2018, 2030
HpyF3I CTNAG 6 cut(s) 195, 1178, 1275, 1536, 1666, 2073
HpySE526I ACGT 4 cut(s) 319, 1789, 1849, 2026
HspAI GCGC 5 cut(s) 331, 400, 424, 650, 2124
KflI GGGWCCC 2 cut(s) 629, 1228
Kpn2I TCCGGA 1 cut(s) 381
KpnI GGTACC 1 cut(s) 862
KroI GCCGGC 1 cut(s) 996
KroNI GCCGGC 1 cut(s) 998
Ksp22I TGATCA 1 cut(s) 1021
LmnI GCTCC 5 cut(s) 317, 338, 517, 1080, 1877
Lsp1109I GCAGC 5 cut(s) 241, 604, 1649, 1915, 2033
LweI GCATC 7 cut(s) 94, 465, 467, 672, 959, 1469, 1541
MaeI CTAG 7 cut(s) 441, 1367, 1755, 1794, 1817, 2004, 2034
MaeII ACGT 4 cut(s) 319, 1789, 1849, 2026
MaeIII GTNAC 4 cut(s) 826, 1705, 1850, 2193
MboII GAAGA 7 cut(s) 74, 113, 260, 551, 1664, 1796, 1878
MfeI CAATTG 1 cut(s) 2198
MflI RGATCY 1 cut(s) 202
MlsI TGGCCA 1 cut(s) 2061
MluNI TGGCCA 1 cut(s) 2061
MlyI GAGTC 3 cut(s) 251, 1381, 1714
MmeI TCCRAC 2 cut(s) 1169, 1492
Mox20I TGGCCA 1 cut(s) 2061
MroI TCCGGA 1 cut(s) 381
MroNI GCCGGC 1 cut(s) 996
MroXI GAANNNNTTC 2 cut(s) 1194, 1340
MscI TGGCCA 1 cut(s) 2061
MslI CAYNNNNRTG 4 cut(s) 525, 680, 887, 1907
Msp20I TGGCCA 1 cut(s) 2061
MspI CCGG 5 cut(s) 52, 382, 582, 997, 1072
MspR9I CCNGG 4 cut(s) 53, 328, 634, 1072
MunI CAATTG 1 cut(s) 2198
Mva1269I GAATGC 1 cut(s) 1324
MvaI CCWGG 2 cut(s) 328, 634
MvnI CGCG 1 cut(s) 333
MwoI GCNNNNNNNGC 5 cut(s) 260, 1072, 2009, 2018, 2030
NaeI GCCGGC 1 cut(s) 998
NciI CCSGG 2 cut(s) 53, 1072
NcoI CCATGG 2 cut(s) 762, 1971
NdeI CATATG 1 cut(s) 223
NgoMIV GCCGGC 1 cut(s) 996
NlaIV GGNNCC 8 cut(s) 537, 630, 631, 860, 1001, 1076, 1229, 1230
NmuCI GTSAC 3 cut(s) 1705, 1850, 2193
NsbI TGCGCA 1 cut(s) 2125
NspI RCATGY 2 cut(s) 1688, 1988
OliI CACNNNNGTG 1 cut(s) 887
PaeR7I CTCGAG 1 cut(s) 215
PagI TCATGA 4 cut(s) 526, 1024, 1186, 2044
PceI AGGCCT 2 cut(s) 263, 1859
PciI ACATGT 1 cut(s) 1684
PctI GAATGC 1 cut(s) 1324
PdiI GCCGGC 1 cut(s) 998
PdmI GAANNNNTTC 2 cut(s) 1194, 1340
PfeI GAWTC 5 cut(s) 482, 941, 1195, 1336, 1820
PkrI GCNGC 5 cut(s) 256, 619, 1639, 1930, 2023
PleI GAGTC 3 cut(s) 250, 1380, 1714
PpsI GAGTC 3 cut(s) 250, 1380, 1714
PpuMI RGGWCCY 2 cut(s) 629, 1228
PscI ACATGT 1 cut(s) 1684
Psp1406I AACGTT 1 cut(s) 1789
Psp5II RGGWCCY 2 cut(s) 629, 1228
Psp6I CCWGG 2 cut(s) 326, 632
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 2 cut(s) 326, 632
PspN4I GGNNCC 8 cut(s) 537, 630, 631, 860, 1001, 1076, 1229, 1230
PspPI GGNCC 6 cut(s) 211, 584, 629, 999, 1228, 1591
PspPPI RGGWCCY 2 cut(s) 629, 1228
PspXI VCTCGAGB 1 cut(s) 215
PsuI RGATCY 1 cut(s) 202
RigI GGCCGGCC 1 cut(s) 1000
RsaI GTAC 3 cut(s) 301, 860, 2214
RsaNI GTAC 3 cut(s) 300, 859, 2213
RseI CAYNNNNRTG 4 cut(s) 525, 680, 887, 1907
SatI GCNGC 5 cut(s) 255, 618, 1638, 1929, 2022
Sau96I GGNCC 6 cut(s) 211, 584, 629, 999, 1228, 1591
ScaI AGTACT 1 cut(s) 301
SchI GAGTC 3 cut(s) 251, 1381, 1714
ScrFI CCNGG 4 cut(s) 53, 328, 634, 1072
SfaNI GCATC 7 cut(s) 94, 465, 467, 672, 959, 1469, 1541
SfcI CTRYAG 2 cut(s) 805, 844
Sfr274I CTCGAG 1 cut(s) 215
SinI GGWCC 5 cut(s) 211, 584, 629, 1228, 1591
SlaI CTCGAG 1 cut(s) 215
SmiMI CAYNNNNRTG 4 cut(s) 525, 680, 887, 1907
SmlI CTYRAG 2 cut(s) 215, 697
SmoI CTYRAG 2 cut(s) 215, 697
SseBI AGGCCT 2 cut(s) 263, 1859
SsiI CCGC 3 cut(s) 539, 1064, 1243
SspMI CTAG 7 cut(s) 441, 1367, 1755, 1794, 1817, 2004, 2034
StuI AGGCCT 2 cut(s) 263, 1859
StyD4I CCNGG 4 cut(s) 51, 326, 632, 1070
StyI CCWWGG 4 cut(s) 258, 405, 762, 1971
TaaI ACNGT 6 cut(s) 826, 863, 1041, 1289, 1831, 1909
TaiI ACGT 4 cut(s) 322, 1792, 1852, 2029
TaqI TCGA 4 cut(s) 93, 216, 1375, 2098
TatI WGTACW 2 cut(s) 299, 2212
TfiI GAWTC 5 cut(s) 482, 941, 1195, 1336, 1820
TscAI CASTG 9 cut(s) 142, 148, 154, 1011, 1024, 1229, 1423, 1777, 1914
TseFI GTSAC 3 cut(s) 1705, 1850, 2193
TseI GCWGC 5 cut(s) 254, 617, 1637, 1928, 2021
Tsp45I GTSAC 3 cut(s) 1705, 1850, 2193
TspDTI ATGAA 6 cut(s) 815, 954, 1203, 1427, 2061, 2249
TspGWI ACGGA 1 cut(s) 1067
TspRI CASTG 9 cut(s) 142, 148, 154, 1011, 1024, 1229, 1423, 1777, 1914
VpaK11BI GGWCC 5 cut(s) 211, 584, 629, 1228, 1591
XagI CCTNNNNNAGG 1 cut(s) 882
XapI RAATTY 6 cut(s) 183, 236, 385, 1330, 1865, 2094
XbaI TCTAGA 2 cut(s) 1366, 1816
XceI RCATGY 2 cut(s) 1688, 1988
XhoI CTCGAG 1 cut(s) 215
XmiI GTMKAC 2 cut(s) 75, 1206
XmnI GAANNNNTTC 2 cut(s) 1194, 1340
XspI CTAG 7 cut(s) 441, 1367, 1755, 1794, 1817, 2004, 2034
ZrmI AGTACT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.