Rorug02G0088500

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000165
Physical Location & Seq
Forward (+)
7077972 .. 7080152
2181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0088500.1

Sequence Viewer

Length: 1182 bp
ATGGCCGATTCCTCAGTTACTCTCTTCTCTCCTTTCAAGATGGCCAAGTTCAATCTCTCTCACAGGGTTGTGCTTGCGCCGATGACGCGGTGCCGAGCCTTGAACGGAGTCCCGAACCCGGCCCTGGCGGAGTACTACTCTCAGAGGTCAACCCCCGGCGGCTTTCTCATCAGCGAAGGCACTTTGGTCTCTGACACAGCCGCTGGGTTTCCACATGTTCCTGGGATTTTCTCGGATGAACAGGTTGAGGCATGGAAGAAGGTAGTCGACGCCGTTCACGCGAAAGGAGCCATTATTTTCTGTCAGCTATGGCATGAAGGTCGTGCTTCCCATGGAGTTTACCAACCTGGTGGGGGATCGCCAATTTCTTCAACCAACAATCCCATTTCAAAGAGGTGGAAAATTCTCTTGCCAGATGGGTCTCATGGCACTTACCCTCAGCCTCAACGCCTCGAAATACATGAAATTCCCCACATTGTTGAGCAGTATCGCCGCGCTGCTGTGAATGCCATTCGAGCAGGTTTTGATGGAATTGAGATCCATGGGGCACATGGCTATCTAATTGATCAATTCTTGAAAGATGGGATCAACGATCGAACTGATGAGTATGGTGGGTCGCTTGCAAATCGCTGCAAATTCTTGATTGAAATTGTTCAAGCAGTAGTTGAAGCCATTGGTGCTGATAGAGTTGGTGTCAGAGTCTCACCAGCTATTGATCACCTTGATGCTATGGACTCCGACCCAGTTAGCCTAGGCTTTGCTGTGATTGAAAGGCTTAACAAGCTTCAACAGAACATAGGCTCAAAGCTCACATACCTCCATGTGACTCAGCCTCGTTACGCTGCCTATGGTCAAGCAGAATCGGGCAAACATGGCAGTGATCAAGACGAAGCCGAATTTATGAGGACTCTGAGAAAAGCTTATCAAGGTACATTCATGGCTAGTGGAGGTTTTACTAGAGAGCTAGGAATGGAAGCTGTGGCTTCTGGTGATGCTGATTTAGTGTCGTACGGTCGCTATTTTATCTCAAACCCCGACTTGGTTTTGAGATTGAAGCTGAATGCTCCCTTGACTAAGTATGTCAGGAAGACTTTTTACACCCAAGACCCTGTTGTTGGGTACACAGATTACCCTTTTCTGAACAACACAAGTATTAAAGAGCAAGCAGTCTCCCGCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

393

Amino Acids

43.23

Weight (kDa)

6.9

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oxidored_FMN PF00724 8 - 355 3.5e-85 NADH:flavin oxidoreductase / NADH oxidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 509
AccB1I GGYRCC 1 cut(s) 90
AccI GTMKAC 1 cut(s) 267
AccII CGCG 3 cut(s) 88, 281, 495
AciI CCGC 6 cut(s) 88, 128, 159, 201, 493, 1174
AclWI GGATC 3 cut(s) 364, 532, 593
AcoI YGGCCR 2 cut(s) 3, 42
AcsI RAATTY 4 cut(s) 402, 465, 635, 896
AcyI GRCGYC 1 cut(s) 270
AfaI GTAC 4 cut(s) 134, 931, 1010, 1121
AfiI CCNNNNNNNGG 5 cut(s) 118, 124, 353, 1039, 1115
AflIII ACRYGT 1 cut(s) 214
AjnI CCWGG 3 cut(s) 123, 220, 346
AluBI AGCT 8 cut(s) 307, 710, 784, 808, 920, 964, 977, 1057
AluI AGCT 8 cut(s) 307, 710, 784, 808, 920, 964, 977, 1057
Alw26I GTCTC 4 cut(s) 193, 426, 706, 1174
AlwI GGATC 3 cut(s) 364, 532, 593
AlwNI CAGNNNCTG 1 cut(s) 203
AoxI GGCC 3 cut(s) 3, 42, 120
ApeKI GCWGC 3 cut(s) 497, 630, 842
ApoI RAATTY 4 cut(s) 402, 465, 635, 896
Asp700I GAANNNNTTC 1 cut(s) 651
AspA2I CCTAGG 1 cut(s) 751
AspLEI GCGC 2 cut(s) 79, 497
AspS9I GGNCC 1 cut(s) 121
AsuC2I CCSGG 2 cut(s) 119, 156
AsuHPI GGTGA 3 cut(s) 696, 710, 1001
AvrII CCTAGG 1 cut(s) 751
BaeGI GKGCMC 1 cut(s) 550
BalI TGGCCA 1 cut(s) 44
BanI GGYRCC 1 cut(s) 90
BarI GAAGNNNNNNTAC 2 cut(s) 1079, 1111
BbsI GAAGAC 1 cut(s) 1094
BbvCI CCTCAGC 1 cut(s) 438
BbvI GCAGC 3 cut(s) 484, 617, 829
BccI CCATC 4 cut(s) 34, 410, 521, 575
BceAI ACGGC 1 cut(s) 257
BcgI CGANNNNNNTGC 2 cut(s) 302, 336
BciT130I CCWGG 3 cut(s) 125, 222, 348
BclI TGATCA 3 cut(s) 565, 715, 880
BcnI CCSGG 2 cut(s) 119, 156
BcoDI GTCTC 4 cut(s) 193, 426, 706, 1174
BfaI CTAG 4 cut(s) 752, 942, 957, 965
BfuAI ACCTGC 1 cut(s) 509
BisI GCNGC 6 cut(s) 160, 201, 493, 498, 631, 843
BlnI CCTAGG 1 cut(s) 751
BlsI GCNGC 6 cut(s) 161, 202, 494, 499, 632, 844
BmcAI AGTACT 1 cut(s) 134
Bme1390I CCNGG 5 cut(s) 119, 125, 156, 222, 348
BmgT120I GGNCC 1 cut(s) 121
BmiI GGNNCC 2 cut(s) 92, 289
BmrFI CCNGG 5 cut(s) 119, 125, 156, 222, 348
BmrI ACTGGG 1 cut(s) 737
BmsI GCATC 2 cut(s) 715, 982
BmuI ACTGGG 1 cut(s) 737
BpiI GAAGAC 1 cut(s) 1094
BplI GAGNNNNNCTC 2 cut(s) 122, 154
Bpu10I CCTNAGC 1 cut(s) 438
BpuMI CCSGG 2 cut(s) 119, 156
BsaHI GRCGYC 1 cut(s) 270
BsaI GGTCTC 2 cut(s) 193, 426
BsaJI CCNNGG 6 cut(s) 123, 154, 221, 331, 541, 751
Bsc4I CCNNNNNNNGG 5 cut(s) 118, 124, 353, 1039, 1115
Bse1I ACTGG 1 cut(s) 743
BseBI CCWGG 3 cut(s) 125, 222, 348
BseDI CCNNGG 6 cut(s) 123, 154, 221, 331, 541, 751
BseGI GGATG 1 cut(s) 241
BseLI CCNNNNNNNGG 5 cut(s) 118, 124, 353, 1039, 1115
BseMII CTCAG 5 cut(s) 27, 155, 452, 842, 902
BseNI ACTGG 1 cut(s) 743
BseSI GKGCMC 1 cut(s) 550
BseXI GCAGC 3 cut(s) 484, 617, 829
BseYI CCCAGC 1 cut(s) 203
Bsh1236I CGCG 3 cut(s) 88, 281, 495
Bsh1285I CGRYCG 2 cut(s) 595, 1015
BshFI GGCC 3 cut(s) 5, 44, 122
BshNI GGYRCC 1 cut(s) 90
BsiEI CGRYCG 2 cut(s) 595, 1015
BsiSI CCGG 2 cut(s) 119, 156
BsiWI CGTACG 1 cut(s) 1008
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 5 cut(s) 118, 124, 353, 1039, 1115
BsmAI GTCTC 4 cut(s) 193, 426, 706, 1174
BsmFI GGGAC 1 cut(s) 95
BsmI GAATGC 2 cut(s) 511, 1066
BsnI GGCC 3 cut(s) 5, 44, 122
Bso31I GGTCTC 2 cut(s) 193, 426
Bsp1286I GDGCHC 1 cut(s) 550
Bsp143I GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
Bsp19I CCATGG 2 cut(s) 331, 541
BspACI CCGC 6 cut(s) 88, 128, 159, 201, 493, 1174
BspANI GGCC 3 cut(s) 5, 44, 122
BspCNI CTCAG 5 cut(s) 26, 154, 451, 841, 903
BspFNI CGCG 3 cut(s) 88, 281, 495
BspLI GGNNCC 2 cut(s) 92, 289
BspMI ACCTGC 1 cut(s) 509
BspPI GGATC 3 cut(s) 364, 532, 593
BspT107I GGYRCC 1 cut(s) 90
BspTNI GGTCTC 2 cut(s) 193, 426
BsrI ACTGG 1 cut(s) 743
BssECI CCNNGG 6 cut(s) 123, 154, 221, 331, 541, 751
BssMI GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
BssNI GRCGYC 1 cut(s) 270
BssT1I CCWWGG 3 cut(s) 331, 541, 751
Bst2UI CCWGG 3 cut(s) 125, 222, 348
Bst4CI ACNGT 1 cut(s) 1013
Bst6I CTCTTC 1 cut(s) 29
BstACI GRCGYC 1 cut(s) 270
BstC8I GCNNGC 3 cut(s) 75, 621, 1164
BstDEI CTNAG 6 cut(s) 13, 141, 438, 828, 911, 1074
BstDSI CCRYGG 2 cut(s) 331, 541
BstF5I GGATG 1 cut(s) 241
BstFNI CGCG 3 cut(s) 88, 281, 495
BstHHI GCGC 2 cut(s) 79, 497
BstKTI GATC 7 cut(s) 359, 540, 568, 588, 595, 718, 883
BstMAI GTCTC 4 cut(s) 193, 426, 706, 1174
BstMBI GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
BstMCI CGRYCG 2 cut(s) 595, 1015
BstMWI GCNNNNNNNGC 8 cut(s) 85, 278, 287, 506, 515, 677, 781, 873
BstNI CCWGG 3 cut(s) 125, 222, 348
BstNSI RCATGY 1 cut(s) 218
BstSCI CCNGG 5 cut(s) 117, 123, 154, 220, 346
BstSLI GKGCMC 1 cut(s) 550
BstUI CGCG 3 cut(s) 88, 281, 495
BstV1I GCAGC 3 cut(s) 484, 617, 829
BstV2I GAAGAC 1 cut(s) 1094
BstX2I RGATCY 1 cut(s) 537
BstXI CCANNNNNNTGG 1 cut(s) 350
BstYI RGATCY 1 cut(s) 537
BsuRI GGCC 3 cut(s) 5, 44, 122
BtgI CCRYGG 2 cut(s) 331, 541
BtsCI GGATG 1 cut(s) 241
BtsI GCAGTG 1 cut(s) 883
BtsIMutI CAGTG 1 cut(s) 883
BveI ACCTGC 1 cut(s) 509
Cac8I GCNNGC 3 cut(s) 75, 621, 1164
CaiI CAGNNNCTG 1 cut(s) 203
CfoI GCGC 2 cut(s) 79, 497
Cfr13I GGNCC 1 cut(s) 121
CseI GACGC 2 cut(s) 94, 278
CsiI ACCWGGT 1 cut(s) 346
Csp6I GTAC 4 cut(s) 133, 930, 1009, 1120
CviQI GTAC 4 cut(s) 133, 930, 1009, 1120
DdeI CTNAG 6 cut(s) 13, 141, 438, 828, 911, 1074
DpnI GATC 7 cut(s) 358, 539, 567, 587, 594, 717, 882
DpnII GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
EaeI YGGCCR 2 cut(s) 3, 42
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
EciI GGCGGA 1 cut(s) 143
Eco130I CCWWGG 3 cut(s) 331, 541, 751
Eco31I GGTCTC 2 cut(s) 193, 426
EcoRII CCWGG 3 cut(s) 123, 220, 346
EcoT14I CCWWGG 3 cut(s) 331, 541, 751
ErhI CCWWGG 3 cut(s) 331, 541, 751
FaqI GGGAC 1 cut(s) 95
FbaI TGATCA 3 cut(s) 565, 715, 880
FblI GTMKAC 1 cut(s) 267
Fnu4HI GCNGC 6 cut(s) 160, 201, 493, 498, 631, 843
FokI GGATG 1 cut(s) 248
Fsp4HI GCNGC 6 cut(s) 160, 201, 493, 498, 631, 843
FspBI CTAG 4 cut(s) 752, 942, 957, 965
GlaI GCGC 2 cut(s) 78, 496
GluI GCNGC 6 cut(s) 160, 201, 493, 498, 631, 843
GsaI CCCAGC 1 cut(s) 207
HaeIII GGCC 3 cut(s) 5, 44, 122
HapII CCGG 2 cut(s) 119, 156
HgaI GACGC 2 cut(s) 94, 278
HhaI GCGC 2 cut(s) 79, 497
Hin1I GRCGYC 1 cut(s) 270
Hin6I GCGC 2 cut(s) 77, 495
HinP1I GCGC 2 cut(s) 77, 495
HincII GTYRAC 2 cut(s) 150, 268
HindII GTYRAC 2 cut(s) 150, 268
HindIII AAGCTT 2 cut(s) 782, 918
HinfI GANTC 7 cut(s) 8, 108, 699, 734, 826, 860, 907
HpaII CCGG 2 cut(s) 119, 156
HphI GGTGA 3 cut(s) 696, 710, 1001
Hpy166II GTNNAC 5 cut(s) 150, 268, 277, 340, 1122
Hpy188I TCNGA 7 cut(s) 144, 193, 235, 698, 739, 912, 1140
Hpy188III TCNNGA 6 cut(s) 37, 112, 574, 640, 884, 1084
Hpy8I GTNNAC 5 cut(s) 150, 268, 277, 340, 1122
Hpy99I CGWCG 1 cut(s) 272
HpyAV CCTTC 3 cut(s) 170, 253, 311
HpyCH4III ACNGT 1 cut(s) 1013
HpyCH4V TGCA 2 cut(s) 623, 633
HpyF10VI GCNNNNNNNGC 8 cut(s) 85, 278, 287, 506, 515, 677, 781, 873
HpyF3I CTNAG 6 cut(s) 13, 141, 438, 828, 911, 1074
Hsp92I GRCGYC 1 cut(s) 270
HspAI GCGC 2 cut(s) 77, 495
Ksp22I TGATCA 3 cut(s) 565, 715, 880
Kzo9I GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
LmnI GCTCC 2 cut(s) 287, 1069
Lsp1109I GCAGC 3 cut(s) 484, 617, 829
LweI GCATC 2 cut(s) 715, 982
MabI ACCWGGT 1 cut(s) 346
MaeI CTAG 4 cut(s) 752, 942, 957, 965
MaeIII GTNAC 3 cut(s) 16, 823, 836
MalI GATC 7 cut(s) 358, 539, 567, 587, 594, 717, 882
MboI GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
MboII GAAGA 4 cut(s) 16, 268, 360, 1099
MflI RGATCY 1 cut(s) 537
MhlI GDGCHC 1 cut(s) 550
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 9 cut(s) 363, 402, 465, 531, 561, 569, 635, 648, 896
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 5 cut(s) 117, 708, 728, 820, 901
MmeI TCCRAC 1 cut(s) 762
Mox20I TGGCCA 1 cut(s) 44
MroXI GAANNNNTTC 1 cut(s) 651
MscI TGGCCA 1 cut(s) 44
MseI TTAA 2 cut(s) 777, 1155
MslI CAYNNNNRTG 2 cut(s) 723, 876
Msp20I TGGCCA 1 cut(s) 44
MspA1I CMGCKG 1 cut(s) 203
MspI CCGG 2 cut(s) 119, 156
MspR9I CCNGG 5 cut(s) 119, 125, 156, 222, 348
Mva1269I GAATGC 2 cut(s) 511, 1066
MvaI CCWGG 3 cut(s) 125, 222, 348
MvnI CGCG 3 cut(s) 88, 281, 495
MwoI GCNNNNNNNGC 8 cut(s) 85, 278, 287, 506, 515, 677, 781, 873
NciI CCSGG 2 cut(s) 119, 156
NcoI CCATGG 2 cut(s) 331, 541
NdeII GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
NlaIV GGNNCC 2 cut(s) 92, 289
NmeAIII GCCGAG 1 cut(s) 119
NmuCI GTSAC 1 cut(s) 823
NspI RCATGY 1 cut(s) 218
PciI ACATGT 1 cut(s) 214
PctI GAATGC 2 cut(s) 511, 1066
PdmI GAANNNNTTC 1 cut(s) 651
PfeI GAWTC 2 cut(s) 8, 860
Pfl23II CGTACG 1 cut(s) 1008
PkrI GCNGC 6 cut(s) 161, 202, 494, 499, 632, 844
Ple19I CGATCG 1 cut(s) 595
PleI GAGTC 5 cut(s) 116, 707, 728, 820, 901
PpsI GAGTC 5 cut(s) 116, 707, 728, 820, 901
PscI ACATGT 1 cut(s) 214
Psp6I CCWGG 3 cut(s) 123, 220, 346
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 3 cut(s) 123, 220, 346
PspLI CGTACG 1 cut(s) 1008
PspN4I GGNNCC 2 cut(s) 92, 289
PspPI GGNCC 1 cut(s) 121
PstNI CAGNNNCTG 1 cut(s) 203
PsuI RGATCY 1 cut(s) 537
PvuI CGATCG 1 cut(s) 595
RsaI GTAC 4 cut(s) 134, 931, 1010, 1121
RsaNI GTAC 4 cut(s) 133, 930, 1009, 1120
RseI CAYNNNNRTG 2 cut(s) 723, 876
SalI GTCGAC 1 cut(s) 266
SaqAI TTAA 2 cut(s) 777, 1155
SatI GCNGC 6 cut(s) 160, 201, 493, 498, 631, 843
Sau3AI GATC 7 cut(s) 356, 537, 565, 585, 592, 715, 880
Sau96I GGNCC 1 cut(s) 121
ScaI AGTACT 1 cut(s) 134
SchI GAGTC 5 cut(s) 117, 708, 728, 820, 901
ScrFI CCNGG 5 cut(s) 119, 125, 156, 222, 348
SduI GDGCHC 1 cut(s) 550
SexAI ACCWGGT 1 cut(s) 346
SfaNI GCATC 2 cut(s) 715, 982
SmiMI CAYNNNNRTG 2 cut(s) 723, 876
Sse9I AATT 9 cut(s) 363, 402, 465, 531, 561, 569, 635, 648, 896
SsiI CCGC 6 cut(s) 88, 128, 159, 201, 493, 1174
SspMI CTAG 4 cut(s) 752, 942, 957, 965
StyD4I CCNGG 5 cut(s) 117, 123, 154, 220, 346
StyI CCWWGG 3 cut(s) 331, 541, 751
TaaI ACNGT 1 cut(s) 1013
TaqI TCGA 4 cut(s) 267, 453, 514, 595
TasI AATT 9 cut(s) 363, 402, 465, 531, 561, 569, 635, 648, 896
TatI WGTACW 1 cut(s) 132
TauI GCSGC 3 cut(s) 162, 203, 495
TfiI GAWTC 2 cut(s) 8, 860
Tru1I TTAA 2 cut(s) 777, 1155
Tru9I TTAA 2 cut(s) 777, 1155
TscAI CASTG 1 cut(s) 883
TseFI GTSAC 1 cut(s) 823
TseI GCWGC 3 cut(s) 497, 630, 842
Tsp45I GTSAC 1 cut(s) 823
TspDTI ATGAA 4 cut(s) 252, 330, 477, 925
TspGWI ACGGA 1 cut(s) 120
TspRI CASTG 1 cut(s) 883
XapI RAATTY 4 cut(s) 402, 465, 635, 896
XceI RCATGY 1 cut(s) 218
XcmI CCANNNNNNNNNTGG 1 cut(s) 548
XmaJI CCTAGG 1 cut(s) 751
XmiI GTMKAC 1 cut(s) 267
XmnI GAANNNNTTC 1 cut(s) 651
XspI CTAG 4 cut(s) 752, 942, 957, 965
ZrmI AGTACT 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.