Rw2G008310

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
8194927 .. 8197750
2824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G008310.1

Sequence Viewer

Length: 2349 bp
ATGGAGTTTGAGCCATTGAGCTTGGGGAATGAGGTTGTTGAATTTGACCTGATGGGTCTTGGTGACATTGACCACCCTGTTGTTGACATTGACATTTTTGACGATTCTCTTGCTGTTGTTGGTTCCAATCCCATTGCCCTACCTTACATTATTGAAGGAGAGACTAATCTCGAGCCGTATGAGGGGATGGAGTTTGAGTCAGAAGAGGCTGCCAAGGCCTTTTACAACTCCTATGCTCGCCGCACTGGCTTCAGCACTCGGGTCAGCATGTCTCGCCGCTCCAGGCGGGATGGTGCCATCATCCAGAGGTCTTTTGTTTGTGCCAAGGAGGGTTTTCGTATGGATAAGCATGAAAAGCGTGGTCCTGAGTGTGATGGCAGGGTGAAGCGCCCTCGTGCTGAGACTAGAGTTGGTTGTAAGGCAATGTTGGTGGTCAAGATTCAAGACTCTGGGGGATGGGTTGTGTCATGTTTTGTTAAGGAACATAACCATGAGCTGGTTCCCCCGGATCAGGTGCATTGCCTCCGCTCTCATCGTCACGTCTCTGGTTCTGCAAAGTCTTTGGTTGATACCTTGCAGGGTGCTGGCATTGGGCCTAGTGGAATTATGTCCGCCCTCATCAAAGAATATGGTGATATTAGCAAAGTTGGCTTCACGGAGCGTGACTGCAGGAATTACATGAGGAGTAGTCGGCAAAGGACCCTAGGAGGTGACACTCGGGTGCTCTTGGATTACTTGAAGAACAGGCAAGCCAACGACCCAGCATTTTTCTATTCTGTGCAGGGTGATCAAGACCAGTGCATGAGCAATATCTTCTGGGCTGATCCTAAGGCAAGGAGTGATTACACTTACTTTGGTGATACTGTTACCTTTGACACAATTTACAGGTCAAACCGGTATAGATTACCTTTTGCACCTTTCACCGGGGTTAACCATCATGGACAGCCTGTGTTGTTTGGGTGTGCCCTCTTGGTAAATGAATCTGAGGCATCGTTTCTATGGCTTTTTAAAACATGGCTTATGGCAATGTCTGGCCGACCTCCAGTCTCAATCACTACTGATCATGATAGGGTGATCCGCATGGTTATCACCCAGGTTTTTCCTGAGACTCGACACCGCTTCTGCAAGTGGCAGATTTTTAAAGAGTGCCAAGAGAAACTGTCCCATGTACTTTCTGAGCATTCCAACTTTGAAGCAGAGCTTCACAAATGTGTCAACCTGACTGAATCTATTGAAGAGTTTGAGTCTAGTTGGTTGTCTCTAATTGAAAAATATGATCTCAGAGATCATGAATGGCTTCAAGGGATATATGCTGATCGAAGGCAGTGGGTACCTATATACTTGAGGGACACCTTCTTTGCAGAAATGTCTATAACACAACGTAGCAATACCATGAACTCATATTTTGATGGATATGTCAATGCATCAACATCTCTACAGCTGTTTGTTAAGCAGTATGAGAAAGCTCTTGAAAGTCGGTATGAGAAAGAAGTGAAGGCAGATTATGATACTATAAACACTGCCCCGCTTCTCAAGACCCCTTCACCGATGGAGAAACAGGCTGGTGAGCTTTACACGAGGAAATTGTTTATGAAATTCCAAGAGGAGCTGGTTGAGACATTAACTTTCTTGGCAACCAAAGTTGAGGATGAGGAGGCAGGATCCATATATCAAGTTGCTAAATTTGGAGAAAGTCACAGAGCTTATTTTGTCAGATACGATGTTCATGAGATGAAAGCATTTTGTAGTTGCCAGATGTTTGAGTTCTCTGGCCTTCTTTGTGGACACATCTTGACAGTTTTTCGGGTGACAAATGTTCTTACTCTGCCATCTCATTATATTTTGAAGCGGTGGACGAGGAATGCCAAGAGTGATGTCATATTGGAGGAACGTGCCAGCAATTTGTTGAATAGGTCGCAAGAATCTCTCACGGCACGATTCAGTAATCTTCGTCATGCGGCACTCAAGTATGTTGATGAAGGTGTTGGAACTGTTGAAATTTATAATGTGGCTATTGCTGCCCTTCAAGAAGCTGCAAAAAAAGTTGCTCTTGAAAACAAGAGTGGCGGGAGGTTGGTCAGTTTTAACAAAACTGGCAGAGATGACGATTTGCACTGGGGATGTCAAGCAAATACATTTGGTGATCATATATGGGGCTTGGAAACTCTGTCTCCGGATGACCAGGACAAGAAAATCCAGAAACTATCGCGTCAACTTGAGCGTGCACGACGAAAATGTGAAGTGTATCGAACGCATTTGTTTTCGGTTTTGAAAGACATTGAGGAACAAAAATTACAACTCTCTGTGAAAGTTCAAAACATTAGAATAGAAATGGAAGAGTGTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

782

Amino Acids

89.93

Weight (kDa)

6.2

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 74 - 168 2.3e-31 FAR1 DNA-binding domain
MULE PF10551 289 - 381 1.4e-26 MULE transposase domain
SWIM PF04434 576 - 602 7.7e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2004
Acc65I GGTACC 1 cut(s) 1330
AccB1I GGYRCC 2 cut(s) 293, 1330
AccB7I CCANNNNNTGG 1 cut(s) 496
AccBSI CCGCTC 2 cut(s) 279, 528
AccII CGCG 1 cut(s) 2209
AccIII TCCGGA 1 cut(s) 2173
AclWI GGATC 5 cut(s) 516, 818, 1069, 1656, 1669
AcoI YGGCCR 1 cut(s) 1033
AcsI RAATTY 4 cut(s) 41, 1595, 1682, 1998
AcuI CTGAAG 1 cut(s) 235
AfaI GTAC 2 cut(s) 1170, 1332
AfiI CCNNNNNNNGG 4 cut(s) 182, 496, 511, 923
AgeI ACCGGT 1 cut(s) 894
AhdI GACNNNNNGTC 1 cut(s) 1043
AjiI CACGTC 1 cut(s) 541
AjnI CCWGG 3 cut(s) 281, 1092, 2181
AleI CACNNNNGTG 2 cut(s) 719, 1209
AluBI AGCT 9 cut(s) 21, 496, 1201, 1441, 1466, 1570, 1609, 1703, 2033
AluI AGCT 9 cut(s) 21, 496, 1201, 1441, 1466, 1570, 1609, 1703, 2033
Alw21I GWGCWC 2 cut(s) 726, 2227
Alw26I GTCTC 9 cut(s) 155, 276, 395, 547, 1051, 1100, 1263, 1610, 2175
Alw44I GTGCAC 1 cut(s) 2223
AlwI GGATC 5 cut(s) 516, 818, 1069, 1656, 1669
Ama87I CYCGRG 3 cut(s) 170, 258, 717
Aor13HI TCCGGA 1 cut(s) 2173
AoxI GGCC 4 cut(s) 216, 593, 1033, 1771
ApaLI GTGCAC 1 cut(s) 2223
ApeKI GCWGC 3 cut(s) 209, 2018, 2033
ApoI RAATTY 4 cut(s) 41, 1595, 1682, 1998
ArsI GACNNNNNNTTYG 2 cut(s) 1340, 1372
AsiGI ACCGGT 1 cut(s) 894
Asp700I GAANNNNTTC 1 cut(s) 1296
Asp718I GGTACC 1 cut(s) 1330
AspA2I CCTAGG 1 cut(s) 703
AspLEI GCGC 1 cut(s) 390
AspS9I GGNCC 3 cut(s) 362, 593, 699
AsuC2I CCSGG 2 cut(s) 506, 925
AvaI CYCGRG 3 cut(s) 170, 258, 717
AvaII GGWCC 2 cut(s) 362, 699
AvrII CCTAGG 1 cut(s) 703
AxyI CCTNAGG 1 cut(s) 828
BaeGI GKGCMC 2 cut(s) 967, 2227
BamHI GGATCC 1 cut(s) 1661
BanI GGYRCC 2 cut(s) 293, 1330
BauI CACGAG 2 cut(s) 393, 1576
Bbv12I GWGCWC 2 cut(s) 726, 2227
BbvI GCAGC 3 cut(s) 196, 2005, 2020
BceAI ACGGC 2 cut(s) 160, 1947
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciT130I CCWGG 3 cut(s) 283, 1094, 2183
BclI TGATCA 3 cut(s) 787, 1060, 2143
BcnI CCSGG 2 cut(s) 506, 925
BcoDI GTCTC 9 cut(s) 155, 276, 395, 547, 1051, 1100, 1263, 1610, 2175
BfaI CTAG 4 cut(s) 405, 597, 704, 1248
BfmI CTRYAG 2 cut(s) 667, 1436
BfoI RGCGCY 1 cut(s) 391
BglI GCCNNNNNGGC 1 cut(s) 246
BisI GCNGC 6 cut(s) 210, 241, 277, 1959, 2019, 2034
BlnI CCTAGG 1 cut(s) 703
BlsI GCNGC 6 cut(s) 211, 242, 278, 1960, 2020, 2035
Bme1390I CCNGG 5 cut(s) 283, 506, 925, 1094, 2183
Bme18I GGWCC 2 cut(s) 362, 699
BmeRI GACNNNNNGTC 1 cut(s) 1043
BmeT110I CYCGRG 3 cut(s) 170, 258, 717
BmgBI CACGTC 1 cut(s) 541
BmgT120I GGNCC 3 cut(s) 362, 593, 699
BmiI GGNNCC 6 cut(s) 124, 295, 501, 701, 1332, 1663
BmrFI CCNGG 5 cut(s) 283, 506, 925, 1094, 2183
BmrI ACTGGG 1 cut(s) 2125
BmsI GCATC 2 cut(s) 998, 1433
BmuI ACTGGG 1 cut(s) 2125
BpmI CTGGAG 2 cut(s) 265, 1026
BpuEI CTTGAG 4 cut(s) 1363, 1517, 1949, 2237
BpuMI CCSGG 2 cut(s) 506, 925
BsaJI CCNNGG 6 cut(s) 213, 324, 504, 703, 924, 1092
BsaWI WCCGGW 2 cut(s) 894, 2173
BsaXI ACNNNNNCTCC 4 cut(s) 182, 212, 2155, 2185
Bsc4I CCNNNNNNNGG 4 cut(s) 182, 496, 511, 923
Bse118I RCCGGY 1 cut(s) 894
Bse1I ACTGG 5 cut(s) 250, 796, 1043, 2098, 2120
Bse21I CCTNAGG 1 cut(s) 828
Bse3DI GCAATG 4 cut(s) 132, 429, 517, 1032
BseAI TCCGGA 1 cut(s) 2173
BseBI CCWGG 3 cut(s) 283, 1094, 2183
BseDI CCNNGG 6 cut(s) 213, 324, 504, 703, 924, 1092
BseGI GGATG 7 cut(s) 192, 295, 300, 461, 1654, 2126, 2182
BseLI CCNNNNNNNGG 4 cut(s) 182, 496, 511, 923
BseMI GCAATG 4 cut(s) 132, 429, 517, 1032
BseMII CTCAG 6 cut(s) 357, 390, 975, 1095, 1167, 1294
BseNI ACTGG 5 cut(s) 250, 796, 1043, 2098, 2120
BseRI GAGGAG 3 cut(s) 697, 1619, 1667
BseSI GKGCMC 2 cut(s) 967, 2227
BseXI GCAGC 3 cut(s) 196, 2005, 2020
BseYI CCCAGC 1 cut(s) 760
BsgI GTGCAG 1 cut(s) 800
Bsh1236I CGCG 1 cut(s) 2209
BshFI GGCC 4 cut(s) 218, 595, 1035, 1773
BshNI GGYRCC 2 cut(s) 293, 1330
BshTI ACCGGT 1 cut(s) 894
BsiHKAI GWGCWC 2 cut(s) 726, 2227
BsiHKCI CYCGRG 3 cut(s) 170, 258, 717
BsiSI CCGG 4 cut(s) 506, 895, 924, 2174
BslFI GGGAC 2 cut(s) 1147, 1361
BslI CCNNNNNNNGG 4 cut(s) 182, 496, 511, 923
BsmAI GTCTC 9 cut(s) 155, 276, 395, 547, 1051, 1100, 1263, 1610, 2175
BsmBI CGTCTC 1 cut(s) 547
BsmFI GGGAC 2 cut(s) 1147, 1361
BsmI GAATGC 2 cut(s) 1180, 1867
BsnI GGCC 4 cut(s) 218, 595, 1035, 1773
BsoBI CYCGRG 3 cut(s) 170, 258, 717
Bsp1286I GDGCHC 3 cut(s) 726, 967, 2227
Bsp13I TCCGGA 1 cut(s) 2173
BspANI GGCC 4 cut(s) 218, 595, 1035, 1773
BspCNI CTCAG 6 cut(s) 358, 391, 976, 1096, 1168, 1293
BspEI TCCGGA 1 cut(s) 2173
BspFNI CGCG 1 cut(s) 2209
BspHI TCATGA 3 cut(s) 1063, 1288, 1726
BspLI GGNNCC 6 cut(s) 124, 295, 501, 701, 1332, 1663
BspMAI CTGCAG 1 cut(s) 671
BspPI GGATC 5 cut(s) 516, 818, 1069, 1656, 1669
BspT107I GGYRCC 2 cut(s) 293, 1330
BsrBI CCGCTC 2 cut(s) 279, 528
BsrDI GCAATG 4 cut(s) 132, 429, 517, 1032
BsrFI RCCGGY 1 cut(s) 894
BsrI ACTGG 5 cut(s) 250, 796, 1043, 2098, 2120
BssAI RCCGGY 1 cut(s) 894
BssECI CCNNGG 6 cut(s) 213, 324, 504, 703, 924, 1092
BssSI CACGAG 2 cut(s) 393, 1576
BssT1I CCWWGG 3 cut(s) 213, 324, 703
Bst2BI CACGAG 2 cut(s) 393, 1576
Bst2UI CCWGG 3 cut(s) 283, 1094, 2183
Bst4CI ACNGT 4 cut(s) 865, 1161, 1798, 1993
Bst6I CTCTTC 3 cut(s) 198, 1230, 2331
BstC8I GCNNGC 5 cut(s) 238, 586, 750, 1897, 2223
BstDEI CTNAG 7 cut(s) 366, 399, 828, 984, 1104, 1176, 1280
BstF5I GGATG 7 cut(s) 192, 295, 300, 461, 1654, 2126, 2182
BstFNI CGCG 1 cut(s) 2209
BstH2I RGCGCY 1 cut(s) 391
BstHHI GCGC 1 cut(s) 390
BstMAI GTCTC 9 cut(s) 155, 276, 395, 547, 1051, 1100, 1263, 1610, 2175
BstMWI GCNNNNNNNGC 6 cut(s) 215, 246, 273, 355, 648, 2018
BstNI CCWGG 3 cut(s) 283, 1094, 2183
BstNSI RCATGY 1 cut(s) 271
BstSCI CCNGG 5 cut(s) 281, 504, 923, 1092, 2181
BstSFI CTRYAG 2 cut(s) 667, 1436
BstSLI GKGCMC 2 cut(s) 967, 2227
BstUI CGCG 1 cut(s) 2209
BstV1I GCAGC 3 cut(s) 196, 2005, 2020
BstX2I RGATCY 1 cut(s) 1661
BstYI RGATCY 1 cut(s) 1661
Bsu36I CCTNAGG 1 cut(s) 828
BsuRI GGCC 4 cut(s) 218, 595, 1035, 1773
BtrI CACGTC 1 cut(s) 541
BtsCI GGATG 7 cut(s) 192, 295, 300, 461, 1654, 2126, 2182
BtsI GCAGTG 2 cut(s) 1331, 1518
BtsIMutI CAGTG 5 cut(s) 243, 803, 1331, 1518, 2113
Cac8I GCNNGC 5 cut(s) 238, 586, 750, 1897, 2223
CciI TCATGA 3 cut(s) 1063, 1288, 1726
CfoI GCGC 1 cut(s) 390
Cfr10I RCCGGY 1 cut(s) 894
Cfr13I GGNCC 3 cut(s) 362, 593, 699
CseI GACGC 1 cut(s) 2198
Csp6I GTAC 2 cut(s) 1169, 1331
CspAI ACCGGT 1 cut(s) 894
CspCI CAANNNNNGTGG 2 cut(s) 411, 446
CviQI GTAC 2 cut(s) 1169, 1331
DdeI CTNAG 7 cut(s) 366, 399, 828, 984, 1104, 1176, 1280
DraI TTTAAA 2 cut(s) 1009, 1141
DriI GACNNNNNGTC 1 cut(s) 1043
EaeI YGGCCR 1 cut(s) 1033
Eam1104I CTCTTC 3 cut(s) 198, 1230, 2331
Eam1105I GACNNNNNGTC 1 cut(s) 1043
EarI CTCTTC 3 cut(s) 198, 1230, 2331
EciI GGCGGA 1 cut(s) 601
Eco130I CCWWGG 3 cut(s) 213, 324, 703
Eco147I AGGCCT 1 cut(s) 218
Eco47I GGWCC 2 cut(s) 362, 699
Eco57I CTGAAG 1 cut(s) 235
Eco81I CCTNAGG 1 cut(s) 828
Eco88I CYCGRG 3 cut(s) 170, 258, 717
EcoO109I RGGNCCY 1 cut(s) 699
EcoRII CCWGG 3 cut(s) 281, 1092, 2181
EcoT14I CCWWGG 3 cut(s) 213, 324, 703
EcoT22I ATGCAT 1 cut(s) 1426
ErhI CCWWGG 3 cut(s) 213, 324, 703
Esp3I CGTCTC 1 cut(s) 547
FalI AAGNNNNNCTT 4 cut(s) 1185, 1217, 2034, 2066
FaqI GGGAC 2 cut(s) 1147, 1361
FauI CCCGC 3 cut(s) 279, 1533, 2060
FbaI TGATCA 3 cut(s) 787, 1060, 2143
Fnu4HI GCNGC 6 cut(s) 210, 241, 277, 1959, 2019, 2034
FokI GGATG 7 cut(s) 199, 287, 302, 468, 1661, 2133, 2189
Fsp4HI GCNGC 6 cut(s) 210, 241, 277, 1959, 2019, 2034
FspBI CTAG 4 cut(s) 405, 597, 704, 1248
GlaI GCGC 1 cut(s) 389
GluI GCNGC 6 cut(s) 210, 241, 277, 1959, 2019, 2034
GsaI CCCAGC 1 cut(s) 764
GsuI CTGGAG 2 cut(s) 265, 1026
HaeII RGCGCY 1 cut(s) 391
HaeIII GGCC 4 cut(s) 218, 595, 1035, 1773
HapII CCGG 4 cut(s) 506, 895, 924, 2174
HgaI GACGC 1 cut(s) 2198
HhaI GCGC 1 cut(s) 390
Hin6I GCGC 1 cut(s) 388
HinP1I GCGC 1 cut(s) 388
HincII GTYRAC 4 cut(s) 85, 931, 1216, 2213
HindII GTYRAC 4 cut(s) 85, 931, 1216, 2213
HpaI GTTAAC 1 cut(s) 931
HpaII CCGG 4 cut(s) 506, 895, 924, 2174
Hpy166II GTNNAC 7 cut(s) 85, 931, 1216, 1784, 1854, 2213, 2225
Hpy188I TCNGA 5 cut(s) 202, 985, 1177, 1283, 1715
Hpy8I GTNNAC 7 cut(s) 85, 931, 1216, 1784, 1854, 2213, 2225
Hpy99I CGWCG 1 cut(s) 2232
HpyAV CCTTC 8 cut(s) 149, 1314, 1363, 1489, 1551, 1784, 1973, 2033
HpyCH4III ACNGT 4 cut(s) 865, 1161, 1798, 1993
HpyCH4IV ACGT 3 cut(s) 540, 1381, 1891
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 246, 273, 355, 648, 2018
HpyF3I CTNAG 7 cut(s) 366, 399, 828, 984, 1104, 1176, 1280
HpySE526I ACGT 3 cut(s) 540, 1381, 1891
HspAI GCGC 1 cut(s) 388
Kpn2I TCCGGA 1 cut(s) 2173
KpnI GGTACC 1 cut(s) 1334
Ksp22I TGATCA 3 cut(s) 787, 1060, 2143
KspAI GTTAAC 1 cut(s) 931
LmnI GCTCC 3 cut(s) 284, 658, 1606
Lsp1109I GCAGC 3 cut(s) 196, 2005, 2020
LweI GCATC 2 cut(s) 998, 1433
MaeI CTAG 4 cut(s) 405, 597, 704, 1248
MaeII ACGT 3 cut(s) 540, 1381, 1891
MaeIII GTNAC 7 cut(s) 62, 536, 662, 710, 865, 1694, 1807
MbiI CCGCTC 2 cut(s) 279, 528
MboII GAAGA 6 cut(s) 215, 751, 805, 1247, 1940, 2348
MflI RGATCY 1 cut(s) 1661
MhlI GDGCHC 3 cut(s) 726, 967, 2227
MlyI GAGTC 4 cut(s) 206, 440, 1102, 1253
MmeI TCCRAC 2 cut(s) 1209, 1966
Mph1103I ATGCAT 1 cut(s) 1426
MroI TCCGGA 1 cut(s) 2173
MroXI GAANNNNTTC 1 cut(s) 1296
MseI TTAA 7 cut(s) 477, 930, 1008, 1140, 1449, 1622, 2085
MslI CAYNNNNRTG 3 cut(s) 489, 719, 1209
MspA1I CMGCKG 1 cut(s) 1441
MspI CCGG 4 cut(s) 506, 895, 924, 2174
MspR9I CCNGG 5 cut(s) 283, 506, 925, 1094, 2183
Mva1269I GAATGC 2 cut(s) 1180, 1867
MvaI CCWGG 3 cut(s) 283, 1094, 2183
MvnI CGCG 1 cut(s) 2209
MwoI GCNNNNNNNGC 6 cut(s) 215, 246, 273, 355, 648, 2018
NciI CCSGG 2 cut(s) 506, 925
NlaIV GGNNCC 6 cut(s) 124, 295, 501, 701, 1332, 1663
NmuCI GTSAC 6 cut(s) 62, 536, 662, 710, 1694, 1807
NsiI ATGCAT 1 cut(s) 1426
NspI RCATGY 1 cut(s) 271
OliI CACNNNNGTG 2 cut(s) 719, 1209
PaeR7I CTCGAG 1 cut(s) 170
PagI TCATGA 3 cut(s) 1063, 1288, 1726
PceI AGGCCT 1 cut(s) 218
PctI GAATGC 2 cut(s) 1180, 1867
PdmI GAANNNNTTC 1 cut(s) 1296
PfeI GAWTC 6 cut(s) 104, 439, 980, 1226, 1922, 1938
PflMI CCANNNNNTGG 1 cut(s) 496
PinAI ACCGGT 1 cut(s) 894
PkrI GCNGC 6 cut(s) 211, 242, 278, 1960, 2020, 2035
PleI GAGTC 4 cut(s) 205, 440, 1102, 1252
PpsI GAGTC 4 cut(s) 205, 440, 1102, 1252
PpuMI RGGWCCY 1 cut(s) 699
PsiI TTATAA 1 cut(s) 2004
Psp5II RGGWCCY 1 cut(s) 699
Psp6I CCWGG 3 cut(s) 281, 1092, 2181
PspFI CCCAGC 1 cut(s) 760
PspGI CCWGG 3 cut(s) 281, 1092, 2181
PspN4I GGNNCC 6 cut(s) 124, 295, 501, 701, 1332, 1663
PspPI GGNCC 3 cut(s) 362, 593, 699
PspPPI RGGWCCY 1 cut(s) 699
PsrI GAACNNNNNNTAC 2 cut(s) 2277, 2309
PstI CTGCAG 1 cut(s) 671
PsuI RGATCY 1 cut(s) 1661
PvuII CAGCTG 1 cut(s) 1441
RsaI GTAC 2 cut(s) 1170, 1332
RsaNI GTAC 2 cut(s) 1169, 1331
RseI CAYNNNNRTG 3 cut(s) 489, 719, 1209
SaqAI TTAA 7 cut(s) 477, 930, 1008, 1140, 1449, 1622, 2085
SatI GCNGC 6 cut(s) 210, 241, 277, 1959, 2019, 2034
Sau96I GGNCC 3 cut(s) 362, 593, 699
SchI GAGTC 4 cut(s) 206, 440, 1102, 1253
ScrFI CCNGG 5 cut(s) 283, 506, 925, 1094, 2183
SduI GDGCHC 3 cut(s) 726, 967, 2227
SfaNI GCATC 2 cut(s) 998, 1433
SfcI CTRYAG 2 cut(s) 667, 1436
Sfr274I CTCGAG 1 cut(s) 170
SinI GGWCC 2 cut(s) 362, 699
SlaI CTCGAG 1 cut(s) 170
SmiMI CAYNNNNRTG 3 cut(s) 489, 719, 1209
SmlI CTYRAG 5 cut(s) 170, 1342, 1532, 1964, 2216
SmoI CTYRAG 5 cut(s) 170, 1342, 1532, 1964, 2216
SseBI AGGCCT 1 cut(s) 218
SspMI CTAG 4 cut(s) 405, 597, 704, 1248
StuI AGGCCT 1 cut(s) 218
StyD4I CCNGG 5 cut(s) 281, 504, 923, 1092, 2181
StyI CCWWGG 3 cut(s) 213, 324, 703
TaaI ACNGT 4 cut(s) 865, 1161, 1798, 1993
TaiI ACGT 3 cut(s) 543, 1384, 1894
TaqI TCGA 4 cut(s) 171, 1111, 1318, 2248
TatI WGTACW 1 cut(s) 1168
TauI GCSGC 3 cut(s) 243, 279, 1961
TfiI GAWTC 6 cut(s) 104, 439, 980, 1226, 1922, 1938
Tru1I TTAA 7 cut(s) 477, 930, 1008, 1140, 1449, 1622, 2085
Tru9I TTAA 7 cut(s) 477, 930, 1008, 1140, 1449, 1622, 2085
TscAI CASTG 5 cut(s) 250, 803, 1331, 1525, 2120
TseFI GTSAC 6 cut(s) 62, 536, 662, 710, 1694, 1807
TseI GCWGC 3 cut(s) 209, 2018, 2033
Tsp45I GTSAC 6 cut(s) 62, 536, 662, 710, 1694, 1807
TspDTI ATGAA 8 cut(s) 366, 993, 1305, 1409, 1607, 1715, 1748, 1992
TspGWI ACGGA 1 cut(s) 671
TspRI CASTG 5 cut(s) 250, 803, 1331, 1525, 2120
Van91I CCANNNNNTGG 1 cut(s) 496
VneI GTGCAC 1 cut(s) 2223
VpaK11BI GGWCC 2 cut(s) 362, 699
XapI RAATTY 4 cut(s) 41, 1595, 1682, 1998
XceI RCATGY 1 cut(s) 271
XhoI CTCGAG 1 cut(s) 170
XmaJI CCTAGG 1 cut(s) 703
XmnI GAANNNNTTC 1 cut(s) 1296
XspI CTAG 4 cut(s) 405, 597, 704, 1248
Zsp2I ATGCAT 1 cut(s) 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.