Rw7G007420

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000165
Physical Location & Seq
Forward (+)
6547940 .. 6552377
4438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G007420.1

Sequence Viewer

Length: 1968 bp
ATGGAGGAGATTGTTGGAGAAGATGGAGAACTAAAGCCGGGTATGCAAGTATATTCTGATGATGAAGCTTATAATCTATATAATAATTATAATTTGAGAAAAGGATTTAACCAAGATACATTTGAACATAAAAGATATAAGAAGTTAGAGACAAGAACCGGTTGTAAGGCTATGATTGTATTTACTGTCGCAGATGGAATATGGACAATTTCTCATATCAATTCAGAGCATAACCATGACCTTGCTAGGCCTGAAGAAAGACAATTTCTAAAATCAGGCCGAAAAGTATTGGAGGCTCATGGAAATGTCATGCTTTCTATGTTAGGTGCTGGTATACCGCCAACAAAATCATTCTTCTACCTAGCAAATGAAATGGGTGGTCCTGAGAATGTTGGGTTCACTAAAAAAGATGTTCATAATTTTTTACAGAGGAAGAAAAATGAAATACTTGAAGCAGGGGATGGACAGAGTTTGCTCAATCACTTTAAGCGCAAACAAGGTGAGGATCCTAACTTTTTCTACCCAATGCAATTAGACCAATATAGTCAAATGACAAATTTCTTTTGGAGAGATAATAGATCAAAATTTGATTATGATTGTTTTGGTGATGTTATTTGCTTTGATACCACATTCCGTACAAACAAGTATAATTTGATTTTTGCTCCTATAGTGGGAGTCAATCATCATTGGAGAAATGTGATGTTTGGATGTGCCTTTTTATTGGATGAGACTACCGAGTCATTTTTGGGATCGATGGGAAATAAAGCACCAAAAACTATTTTTACAGATGAAGATAAAGCAATGGCAAAAGCAATTGAGCAAGTTTTTCCAGGTACACAGCATCGGTTATGCACTTGGCATATTTCTAAGAATGCTGGAAAAAGAATTGGTAGTTACCTTGCAAATCCTGAGTTCAAGAAACAATTCAAGCTTACATGGTTTAGATATAATCTTGGTGGTAATACATGGCTTGAGAAGTTGTATTCGCTCCGAGAGAAATGGTGTCCAGTTTTTAGTTTGGATACCTTTTCAGCAAAAATTAGATCAACTCAAAGGAGTGAAAGTACTAACAATGTGGTCCATCAAATCTCTACACACACAATGGAGCTCATCAAATTTGTGCATCACTATGAGAAAAAAAAAATTGAAGAGATGCATTTGGCGGAGTTGGAAGATGACTATCGATGCAAAAATGGTACACCTCGTCCCCGAGTGTGGAGTAGAATGTTAAGGAGAGAAGCTAAAGTGTATACCATTAAAATGTTTCAGCTATTTGAAACAGAGTTTGTTGGCTGTATGGGAGTTAGACTAAAAGAAGCTTTCAAGAGGGATGAAGTACATTCATATGAAGCAATTGAAGATGGTAAACAAAGTGTACACAAGATTCAATATAACTCTATATCCTTCGACATTTCTTGTTCTTGCAAGTCTTTTGAATCACTTGGAATCTTGTGTCGTCATGCTTTGAAGGTGTTTGATATCAATAATGTCACTGTTTTAGCCACTCAATATACATTGAAGAGGTGGACCAGAGAAGCAAAGAAAGGGATTGTGGTAAGCAATAACATTTCTGGAGGTACAAGTGAGAATATAAAGTCTGCTAGATTGTTACGCCTTAGTGAGCTAATGCATGAAGGAAATAGTGTTTATGACATAGCTTCATTGAGTTGTTCAGGGACTAAGATTGTGAAGGAGCTGTTAGTAAAGGCAATGAAGCGTCTTGAGAAAGACAAGGAAACTCAGGACATGTTGGAAAATTTGAACAAAGTTGTAAACTCAGGTCATGTTTTAGATCCACCATGTGCCAAGACTAAAGGAATGACAAATGAAAGAATCAAAGACATAAGGGAGAAAAAACAACGGAAGAATAAGAAAACAAAAGCTAATTTGTTCCCTATTTTGTACAGAACTCTTACAACTCTGCAAGTACTAATAGAAGAGTATTGTGAAAGAAAGAAGTATACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

655

Amino Acids

76.08

Weight (kDa)

9.15

Isoelectric Point (pI)

36.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 33 - 82 4.9e-08 FAR1 DNA-binding domain
MULE PF10551 204 - 291 4.7e-24 MULE transposase domain
SWIM PF04434 469 - 492 4.4e-07 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 72, 90
AasI GACNNNNNNGTC 1 cut(s) 736
AccI GTMKAC 3 cut(s) 334, 1250, 1961
AciI CCGC 2 cut(s) 338, 1163
AclWI GGATC 4 cut(s) 500, 513, 757, 1787
AcsI RAATTY 4 cut(s) 556, 584, 1115, 1756
AcuI CTGAAG 1 cut(s) 273
AdeI CACNNNGTG 1 cut(s) 1802
AfaI GTAC 9 cut(s) 637, 835, 1066, 1198, 1338, 1377, 1579, 1904, 1929
AfiI CCNNNNNNNGG 2 cut(s) 671, 1215
AflIII ACRYGT 1 cut(s) 1746
AgeI ACCGGT 1 cut(s) 158
AjnI CCWGG 1 cut(s) 829
Alw21I GWGCWC 1 cut(s) 1110
Alw26I GTCTC 2 cut(s) 143, 722
AlwI GGATC 4 cut(s) 500, 513, 757, 1787
Ama87I CYCGRG 1 cut(s) 1209
AoxI GGCC 2 cut(s) 248, 277
ApoI RAATTY 4 cut(s) 556, 584, 1115, 1756
AsiGI ACCGGT 1 cut(s) 158
Asp700I GAANNNNTTC 1 cut(s) 923
AspLEI GCGC 1 cut(s) 492
AspS9I GGNCC 3 cut(s) 380, 1078, 1527
AsuC2I CCSGG 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 512, 617
AvaI CYCGRG 1 cut(s) 1209
AvaII GGWCC 3 cut(s) 380, 1078, 1527
BamHI GGATCC 1 cut(s) 505
BanII GRGCYC 1 cut(s) 1110
Bbv12I GWGCWC 1 cut(s) 1110
BccI CCATC 6 cut(s) 17, 188, 455, 748, 1089, 1355
BciT130I CCWGG 1 cut(s) 831
BciVI GTATCC 1 cut(s) 1015
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 2 cut(s) 143, 722
BfaI CTAG 3 cut(s) 246, 362, 1602
BfmI CTRYAG 1 cut(s) 666
BfuI GTATCC 1 cut(s) 1015
BmcAI AGTACT 2 cut(s) 1066, 1929
Bme1390I CCNGG 2 cut(s) 39, 831
Bme18I GGWCC 3 cut(s) 380, 1078, 1527
BmeT110I CYCGRG 1 cut(s) 1209
BmgT120I GGNCC 3 cut(s) 380, 1078, 1527
BmiI GGNNCC 1 cut(s) 507
BmrFI CCNGG 2 cut(s) 39, 831
BmsI GCATC 4 cut(s) 850, 1132, 1143, 1175
BpmI CTGGAG 1 cut(s) 1593
BpuEI CTTGAG 2 cut(s) 992, 1742
BpuMI CCSGG 1 cut(s) 39
Bsa29I ATCGAT 2 cut(s) 752, 1183
BsaBI GATNNNNATC 1 cut(s) 1179
BsaWI WCCGGW 1 cut(s) 158
BsaXI ACNNNNNCTCC 2 cut(s) 1048, 1078
Bsc4I CCNNNNNNNGG 2 cut(s) 671, 1215
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 1 cut(s) 1007
Bse3DI GCAATG 2 cut(s) 807, 1716
Bse8I GATNNNNATC 1 cut(s) 1179
BseBI CCWGG 1 cut(s) 831
BseCI ATCGAT 2 cut(s) 752, 1183
BseGI GGATG 4 cut(s) 466, 713, 730, 1336
BseJI GATNNNNATC 1 cut(s) 1179
BseLI CCNNNNNNNGG 2 cut(s) 671, 1215
BseMI GCAATG 2 cut(s) 807, 1716
BseMII CTCAG 4 cut(s) 375, 900, 1754, 1791
BseNI ACTGG 1 cut(s) 1007
BseRI GAGGAG 1 cut(s) 20
BshFI GGCC 2 cut(s) 250, 279
BshTI ACCGGT 1 cut(s) 158
BshVI ATCGAT 2 cut(s) 752, 1183
BsiHKAI GWGCWC 1 cut(s) 1110
BsiHKCI CYCGRG 1 cut(s) 1209
BsiSI CCGG 2 cut(s) 38, 159
BslFI GGGAC 2 cut(s) 1191, 1690
BslI CCNNNNNNNGG 2 cut(s) 671, 1215
BsmAI GTCTC 2 cut(s) 143, 722
BsmFI GGGAC 2 cut(s) 1191, 1690
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 2 cut(s) 250, 279
BsoBI CYCGRG 1 cut(s) 1209
Bsp1286I GDGCHC 1 cut(s) 1110
Bsp1407I TGTACA 2 cut(s) 1375, 1902
Bsp143I GATC 5 cut(s) 505, 578, 749, 1043, 1792
BspACI CCGC 2 cut(s) 338, 1163
BspANI GGCC 2 cut(s) 250, 279
BspCNI CTCAG 4 cut(s) 376, 901, 1753, 1790
BspDI ATCGAT 2 cut(s) 752, 1183
BspLI GGNNCC 1 cut(s) 507
BspPI GGATC 4 cut(s) 500, 513, 757, 1787
BsrDI GCAATG 2 cut(s) 807, 1716
BsrFI RCCGGY 1 cut(s) 158
BsrGI TGTACA 2 cut(s) 1375, 1902
BsrI ACTGG 1 cut(s) 1007
BssAI RCCGGY 1 cut(s) 158
BssMI GATC 5 cut(s) 505, 578, 749, 1043, 1792
BssNAI GTATAC 3 cut(s) 335, 1251, 1962
Bst1107I GTATAC 3 cut(s) 335, 1251, 1962
Bst2UI CCWGG 1 cut(s) 831
Bst4CI ACNGT 2 cut(s) 187, 1495
Bst6I CTCTTC 3 cut(s) 1143, 1514, 1932
BstAUI TGTACA 2 cut(s) 1375, 1902
BstDEI CTNAG 7 cut(s) 384, 867, 909, 1616, 1680, 1740, 1777
BstF5I GGATG 4 cut(s) 466, 713, 730, 1336
BstHHI GCGC 1 cut(s) 492
BstKTI GATC 5 cut(s) 508, 581, 752, 1046, 1795
BstMAI GTCTC 2 cut(s) 143, 722
BstMBI GATC 5 cut(s) 505, 578, 749, 1043, 1792
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstNI CCWGG 1 cut(s) 831
BstNSI RCATGY 1 cut(s) 1750
BstSCI CCNGG 2 cut(s) 37, 829
BstSFI CTRYAG 1 cut(s) 666
BstX2I RGATCY 2 cut(s) 505, 1792
BstYI RGATCY 2 cut(s) 505, 1792
BstZ17I GTATAC 3 cut(s) 335, 1251, 1962
Bsu15I ATCGAT 2 cut(s) 752, 1183
BsuI GTATCC 1 cut(s) 1015
BsuRI GGCC 2 cut(s) 250, 279
BsuTUI ATCGAT 2 cut(s) 752, 1183
BtsCI GGATG 4 cut(s) 466, 713, 730, 1336
BtsIMutI CAGTG 1 cut(s) 1491
CfoI GCGC 1 cut(s) 492
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 3 cut(s) 380, 1078, 1527
ClaI ATCGAT 2 cut(s) 752, 1183
CseI GACGC 1 cut(s) 1706
Csp6I GTAC 9 cut(s) 636, 834, 1065, 1197, 1337, 1376, 1578, 1903, 1928
CspAI ACCGGT 1 cut(s) 158
CviQI GTAC 9 cut(s) 636, 834, 1065, 1197, 1337, 1376, 1578, 1903, 1928
DdeI CTNAG 7 cut(s) 384, 867, 909, 1616, 1680, 1740, 1777
DpnI GATC 5 cut(s) 507, 580, 751, 1045, 1794
DpnII GATC 5 cut(s) 505, 578, 749, 1043, 1792
DraIII CACNNNGTG 1 cut(s) 1802
DrdI GACNNNNNNGTC 1 cut(s) 736
DseDI GACNNNNNNGTC 1 cut(s) 736
Eam1104I CTCTTC 3 cut(s) 1143, 1514, 1932
EarI CTCTTC 3 cut(s) 1143, 1514, 1932
EciI GGCGGA 1 cut(s) 1178
Ecl136II GAGCTC 1 cut(s) 1108
Eco147I AGGCCT 1 cut(s) 250
Eco24I GRGCYC 1 cut(s) 1110
Eco32I GATATC 1 cut(s) 1480
Eco47I GGWCC 3 cut(s) 380, 1078, 1527
Eco53kI GAGCTC 1 cut(s) 1108
Eco57I CTGAAG 1 cut(s) 273
Eco88I CYCGRG 1 cut(s) 1209
EcoICRI GAGCTC 1 cut(s) 1108
EcoRII CCWGG 1 cut(s) 829
EcoRV GATATC 1 cut(s) 1480
EcoT22I ATGCAT 2 cut(s) 1158, 1632
EcoT38I GRGCYC 1 cut(s) 1110
FaqI GGGAC 2 cut(s) 1191, 1690
FauNDI CATATG 1 cut(s) 1345
FblI GTMKAC 3 cut(s) 334, 1250, 1961
FokI GGATG 4 cut(s) 473, 720, 737, 1343
FriOI GRGCYC 1 cut(s) 1110
FspBI CTAG 3 cut(s) 246, 362, 1602
GlaI GCGC 1 cut(s) 491
GsuI CTGGAG 1 cut(s) 1593
HaeIII GGCC 2 cut(s) 250, 279
HapII CCGG 2 cut(s) 38, 159
HgaI GACGC 1 cut(s) 1706
HhaI GCGC 1 cut(s) 492
Hin6I GCGC 1 cut(s) 490
HinP1I GCGC 1 cut(s) 490
HindIII AAGCTT 3 cut(s) 66, 929, 1317
HinfI GANTC 6 cut(s) 675, 737, 1384, 1436, 1446, 1833
HpaII CCGG 2 cut(s) 38, 159
HphI GGTGA 2 cut(s) 512, 617
Hpy188I TCNGA 3 cut(s) 58, 226, 992
Hpy188III TCNNGA 7 cut(s) 383, 908, 916, 1324, 1572, 1721, 1742
HpyAV CCTTC 4 cut(s) 1414, 1462, 1628, 1684
HpyCH4III ACNGT 2 cut(s) 187, 1495
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpyF3I CTNAG 7 cut(s) 384, 867, 909, 1616, 1680, 1740, 1777
HspAI GCGC 1 cut(s) 490
Kzo9I GATC 5 cut(s) 505, 578, 749, 1043, 1792
LmnI GCTCC 4 cut(s) 667, 993, 1105, 1693
LweI GCATC 4 cut(s) 850, 1132, 1143, 1175
MaeI CTAG 3 cut(s) 246, 362, 1602
MaeIII GTNAC 3 cut(s) 893, 1489, 1608
MalI GATC 5 cut(s) 507, 580, 751, 1045, 1794
MboI GATC 5 cut(s) 505, 578, 749, 1043, 1792
MfeI CAATTG 2 cut(s) 813, 1353
MflI RGATCY 2 cut(s) 505, 1792
MhlI GDGCHC 1 cut(s) 1110
MlyI GAGTC 2 cut(s) 684, 746
MmeI TCCRAC 2 cut(s) 1149, 1731
MnlI CCTC 7 cut(s) 286, 423, 496, 1212, 1320, 1515, 1568
Mph1103I ATGCAT 2 cut(s) 1158, 1632
MroXI GAANNNNTTC 1 cut(s) 923
MseI TTAA 4 cut(s) 108, 486, 1229, 1257
MslI CAYNNNNRTG 5 cut(s) 234, 303, 1128, 1259, 1344
MspI CCGG 2 cut(s) 38, 159
MspR9I CCNGG 2 cut(s) 39, 831
MunI CAATTG 2 cut(s) 813, 1353
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 1 cut(s) 831
MwoI GCNNNNNNNGC 1 cut(s) 43
NciI CCSGG 1 cut(s) 39
NdeI CATATG 1 cut(s) 1345
NdeII GATC 5 cut(s) 505, 578, 749, 1043, 1792
NlaIV GGNNCC 1 cut(s) 507
NmuCI GTSAC 1 cut(s) 1489
NsiI ATGCAT 2 cut(s) 1158, 1632
NspI RCATGY 1 cut(s) 1750
PceI AGGCCT 1 cut(s) 250
PciI ACATGT 1 cut(s) 1746
PctI GAATGC 1 cut(s) 877
PdmI GAANNNNTTC 1 cut(s) 923
PfeI GAWTC 4 cut(s) 1384, 1436, 1446, 1833
PinAI ACCGGT 1 cut(s) 158
PleI GAGTC 2 cut(s) 683, 745
PpsI GAGTC 2 cut(s) 683, 745
PscI ACATGT 1 cut(s) 1746
PsiI TTATAA 2 cut(s) 72, 90
Psp124BI GAGCTC 1 cut(s) 1110
Psp6I CCWGG 1 cut(s) 829
PspGI CCWGG 1 cut(s) 829
PspN4I GGNNCC 1 cut(s) 507
PspPI GGNCC 3 cut(s) 380, 1078, 1527
PsuI RGATCY 2 cut(s) 505, 1792
RsaI GTAC 9 cut(s) 637, 835, 1066, 1198, 1338, 1377, 1579, 1904, 1929
RsaNI GTAC 9 cut(s) 636, 834, 1065, 1197, 1337, 1376, 1578, 1903, 1928
RseI CAYNNNNRTG 5 cut(s) 234, 303, 1128, 1259, 1344
SacI GAGCTC 1 cut(s) 1110
SaqAI TTAA 4 cut(s) 108, 486, 1229, 1257
Sau3AI GATC 5 cut(s) 505, 578, 749, 1043, 1792
Sau96I GGNCC 3 cut(s) 380, 1078, 1527
ScaI AGTACT 2 cut(s) 1066, 1929
SchI GAGTC 2 cut(s) 684, 746
ScrFI CCNGG 2 cut(s) 39, 831
SduI GDGCHC 1 cut(s) 1110
SfaNI GCATC 4 cut(s) 850, 1132, 1143, 1175
SfcI CTRYAG 1 cut(s) 666
SinI GGWCC 3 cut(s) 380, 1078, 1527
SmiMI CAYNNNNRTG 5 cut(s) 234, 303, 1128, 1259, 1344
SmlI CTYRAG 2 cut(s) 971, 1721
SmoI CTYRAG 2 cut(s) 971, 1721
SseBI AGGCCT 1 cut(s) 250
SsiI CCGC 2 cut(s) 338, 1163
SspMI CTAG 3 cut(s) 246, 362, 1602
SstI GAGCTC 1 cut(s) 1110
StuI AGGCCT 1 cut(s) 250
StyD4I CCNGG 2 cut(s) 37, 829
TaaI ACNGT 2 cut(s) 187, 1495
TaqI TCGA 3 cut(s) 752, 1183, 1407
TatI WGTACW 5 cut(s) 1064, 1336, 1375, 1902, 1927
TfiI GAWTC 4 cut(s) 1384, 1436, 1446, 1833
Tru1I TTAA 4 cut(s) 108, 486, 1229, 1257
Tru9I TTAA 4 cut(s) 108, 486, 1229, 1257
TscAI CASTG 1 cut(s) 1498
TseFI GTSAC 1 cut(s) 1489
Tsp45I GTSAC 1 cut(s) 1489
TspGWI ACGGA 2 cut(s) 623, 1876
TspRI CASTG 1 cut(s) 1498
VpaK11BI GGWCC 3 cut(s) 380, 1078, 1527
XapI RAATTY 4 cut(s) 556, 584, 1115, 1756
XceI RCATGY 1 cut(s) 1750
XmiI GTMKAC 3 cut(s) 334, 1250, 1961
XmnI GAANNNNTTC 1 cut(s) 923
XspI CTAG 3 cut(s) 246, 362, 1602
ZrmI AGTACT 2 cut(s) 1066, 1929
Zsp2I ATGCAT 2 cut(s) 1158, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.