pycom05g13970

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000165
Physical Location & Seq
Forward (+)
17493857 .. 17496444
2588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g13970.1

Sequence Viewer

Length: 2373 bp
ATGGATAACGAGGTGATTGAGTTTGATATTGGGTTGGGAGGAGGGGGAGGCCGGGATGGGGATGATGATTTTGTAGACATTGAGCATCCTGTTGATGATGAGGAAATGGTTGATAGTCCTCTTCTGCGGAGTGGCAGTGGCGGTGGTATTGTTTTCGGTGGTGGTGAAATTTACTTTCCTGAGGGGGATCTCTTGGACCTTGAGCCATATGACGGCATGGAATTTGAGTCTGAAGAGGCTGCCAAGGCCTTTTACAATTCGTATGCACGGCGGGTTGGGTTCAGTACTCGTGTCAGCTCCTCACGTCGTTCCAGGCGCGATGGAGCAATCATACAGAGACAGTTTGTTTGTGCTAAAGAGGGTTTCCGGAATTTGAATGAGAAGCGCACCAAGGATAGGGAGATTAAGCGCCCTCGGACTATCACTAGAGTAGGGTGCAAAGCATCCTTGTCTGTAAAGATGCAAGATTCGGGGAAATGGGTGGTGTCTGGTTTTGTTAAGGATCATAATCATGAGTTGGTTCCGCCAGATCAGGTGCATTGTCTTCGTTCTCACAGGCAAATATCTGGTCCTGCTAAGACTTTGATTGATACCTTGCAGGCTGCTGGAATGGGTCCCAGGAGGATTATGTCAGCGCTGATTAAGGAATATGGTGGGATAAGCAAAGTCGGATTTACAGAGGTGGATTGTAGGAATTACATGAGGAATAATCGCCATAAGAGCTTAGATGGGGACATTCAGATGCTTTTGGATTACTTGAGACAAATGCAAGCTGATAATCACAACTTTTTCTATGCTGTGCAGGGCGATGACGATCAGTCCATGGGAAATGTCATTTGGGCTGATCCAAAGGCAAGGATGAACTATAGTTATTTTGGTGATACTGTTACTTTTGACACTACCTACAGGTCTAACAGGTACCGTTTGCCCTTTGCACCTTTCACAGGGGTGAACCATCACGGTCAGCCTGTTTTGTTTGGTTGTGCCTTTCTGATAAATGAATCTGAAGCATCATTCGTTTGGCTGTTCAAAACATGGCTTATGGCAATGTCAGGCCGGCCCCCAGTGTCAATTACAACTGATCAGGATCCTGTGATACAGTCAGCCATCACGCAGGTTTTCCCGCAGACCCGGCTCCGTTTCTGCAAATGGCACATCTTTAAGAAATGTCAGGAGAAGCTATCCCATGTGTTTCTTAAGCATCCGACCTTTGAAGCAGACTTTCACAAGTGTGTTAATTTGACTGAGTCCATAGAAGAATTTGAGTCTTATTGGTTGTCTCTTGTTGATAGATACAATCTCAGAGATCATGAATGGATTCAAATGGTATACTCCGCTCGCAGGCAGTGGGTCCCTGTATATCTGCGGGACACTTTTTTTGCAGAAATGTCCATTACTCAGAGAAGTGACAGTATGAACTCATATTTTGATGGATATGTGAATGCTTCAACAAATTTGAGTCAGTTCTTTAAGCTTTATGAGAAAGCTCTAGAGAGTCGAAATGAGAAGGAAGTGAAAGCAGATTTTGAAACTATGAACACTGCCCCAGTTTTGAAAACCCCATCTCCAATGGAAAAGCAAGCATCCGAGCTTTATACAAAAAAGATATTTATGAGGTTTCAAGAGGAGTTAGTTGGAACGCTAACTCTCACAGCATCTAAGGGTGATGATGATGGGGAGATCATCACCTATCAAGTAGCTAAGTTTGGGGAGGACCATAAAGCATACTATGTTAAGTTTAATGTTTTGGAGATGATGGCAACTTGTAGTTGCCAGATGTTTGAGTTCTCAGGTCTTCTTTGCAGACATGTATTGGCAGTCTTTAGAGTGACCAATGTGCTGACTCTCCCATCCCATTACATATTGAAACGATGGACTAGAAATGCCAAGAGCAGTGTCATGTTAGAAGAACGTTCTAGTGATGTATATACCAATTATCTAGAATCTCATACTGTTCGGTACAATACCCTACGTCACGAGGCCTTTAAATTTGTAGATGGAGCAAGGTCTTCAGAAACTTATGACATTGCAGTGGAAGCTTTGAAAGAAGCTGGAAAGAAAGTAGCTCATGCCACAAAGCATGAGGGGAAATCCATGGTGAATGGGCATGTCAGGGGGAACTTGGCTGGTGGGGCAAGTCAGGCAGCACGTTGTGCTAGTGGGGATCATGAAGGAAGTTCTGGCCAACACTTGTCTGAGGATGATATGGACAAAAAAATTCGAGAACTCACGAATGAGCTGGAGTGCGCAAATCGGAAATGTGAAGTTTATCGGGCTAACCTGCTTTCAGTTTTGAAAGATATAGAGGATCATAAGTCACAATTGTCAATTAAAGTACAAAACATTAAAATTGGCATGAAAGACGGCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

791

Amino Acids

90.1

Weight (kDa)

6.36

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 84 - 175 1.3e-33 FAR1 DNA-binding domain
MULE PF10551 296 - 389 1.5e-29 MULE transposase domain
SWIM PF04434 584 - 609 8.3e-10 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2248
Acc36I ACCTGC 2 cut(s) 1105, 2289
Acc65I GGTACC 1 cut(s) 918
AccB1I GGYRCC 1 cut(s) 918
AccBSI CCGCTC 1 cut(s) 1337
AccI GTMKAC 2 cut(s) 75, 1329
AccII CGCG 1 cut(s) 318
AccIII TCCGGA 1 cut(s) 366
AciI CCGC 7 cut(s) 127, 141, 271, 524, 1124, 1335, 1366
AclI AACGTT 1 cut(s) 1912
AclWI GGATC 7 cut(s) 195, 510, 839, 1082, 1095, 2172, 2316
AcoI YGGCCR 1 cut(s) 2182
AcsI RAATTY 7 cut(s) 168, 221, 370, 1259, 1453, 1988, 2217
AcuI CTGAAG 3 cut(s) 252, 1026, 1995
AdeI CACNNNGTG 1 cut(s) 2153
AfaI GTAC 4 cut(s) 286, 920, 1961, 2337
AfeI AGCGCT 1 cut(s) 636
AfiI CCNNNNNNNGG 5 cut(s) 58, 212, 396, 944, 1341
AflII CTTAAG 1 cut(s) 1196
AflIII ACRYGT 1 cut(s) 1807
AhdI GACNNNNNGTC 1 cut(s) 817
AjiI CACGTC 1 cut(s) 305
AjnI CCWGG 2 cut(s) 311, 617
AjuI GAANNNNNNNTTGG 2 cut(s) 820, 852
AleI CACNNNNGTG 2 cut(s) 947, 1230
Alw26I GTCTC 3 cut(s) 331, 754, 1284
AlwI GGATC 7 cut(s) 195, 510, 839, 1082, 1095, 2172, 2316
Aor13HI TCCGGA 1 cut(s) 366
Aor51HI AGCGCT 1 cut(s) 636
AoxI GGCC 7 cut(s) 49, 246, 1054, 1058, 1980, 2182, 2365
ApeKI GCWGC 3 cut(s) 239, 602, 2144
ApoI RAATTY 7 cut(s) 168, 221, 370, 1259, 1453, 1988, 2217
ArsI GACNNNNNNTTYG 6 cut(s) 330, 362, 553, 585, 1361, 1393
Asp700I GAANNNNTTC 1 cut(s) 1317
Asp718I GGTACC 1 cut(s) 918
AspLEI GCGC 5 cut(s) 318, 387, 411, 637, 2249
AspS9I GGNCC 6 cut(s) 196, 569, 614, 1059, 1351, 1714
AsuC2I CCSGG 2 cut(s) 53, 1132
AsuHPI GGTGA 7 cut(s) 25, 176, 890, 961, 1676, 1678, 2110
AvaII GGWCC 5 cut(s) 196, 569, 614, 1351, 1714
AxyI CCTNAGG 1 cut(s) 180
BalI TGGCCA 1 cut(s) 2184
BamHI GGATCC 1 cut(s) 1087
BanI GGYRCC 1 cut(s) 918
BauI CACGAG 2 cut(s) 288, 1976
BbsI GAAGAC 3 cut(s) 536, 1787, 2001
BbvI GCAGC 3 cut(s) 226, 589, 2156
BceAI ACGGC 2 cut(s) 229, 284
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 2 cut(s) 313, 619
BclI TGATCA 1 cut(s) 1081
BcnI CCSGG 2 cut(s) 53, 1132
BcoDI GTCTC 3 cut(s) 331, 754, 1284
BfaI CTAG 6 cut(s) 426, 1490, 1878, 1917, 1940, 2157
BfmI CTRYAG 2 cut(s) 865, 904
BfoI RGCGCY 2 cut(s) 412, 638
BfrI CTTAAG 1 cut(s) 1196
BfuAI ACCTGC 2 cut(s) 1105, 2289
BisI GCNGC 3 cut(s) 240, 603, 2145
BlsI GCNGC 3 cut(s) 241, 604, 2146
BmcAI AGTACT 1 cut(s) 286
Bme1390I CCNGG 4 cut(s) 53, 313, 619, 1132
Bme18I GGWCC 5 cut(s) 196, 569, 614, 1351, 1714
BmeRI GACNNNNNGTC 1 cut(s) 817
BmgBI CACGTC 1 cut(s) 305
BmgT120I GGNCC 6 cut(s) 196, 569, 614, 1059, 1351, 1714
BmiI GGNNCC 9 cut(s) 522, 615, 616, 920, 1061, 1089, 1136, 1352, 1353
BmrFI CCNGG 4 cut(s) 53, 313, 619, 1132
BmrI ACTGGG 2 cut(s) 1058, 1541
BmsI GCATC 8 cut(s) 94, 450, 452, 732, 1019, 1210, 1592, 1664
BmuI ACTGGG 2 cut(s) 1058, 1541
BpiI GAAGAC 3 cut(s) 536, 1787, 2001
BpmI CTGGAG 1 cut(s) 2261
BpuEI CTTGAG 2 cut(s) 221, 778
BpuMI CCSGG 2 cut(s) 53, 1132
BsaBI GATNNNNATC 3 cut(s) 507, 813, 1086
BsaJI CCNNGG 6 cut(s) 243, 390, 413, 617, 822, 2094
BsaWI WCCGGW 1 cut(s) 366
BsaXI ACNNNNNCTCC 4 cut(s) 121, 151, 1549, 1579
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 212, 396, 944, 1341
Bse118I RCCGGY 1 cut(s) 1056
Bse1I ACTGG 2 cut(s) 1064, 1547
Bse21I CCTNAGG 1 cut(s) 180
Bse3DI GCAATG 2 cut(s) 1053, 2025
Bse8I GATNNNNATC 3 cut(s) 507, 813, 1086
BseAI TCCGGA 1 cut(s) 366
BseBI CCWGG 2 cut(s) 313, 619
BseDI CCNNGG 6 cut(s) 243, 390, 413, 617, 822, 2094
BseGI GGATG 9 cut(s) 61, 67, 85, 443, 864, 1201, 1583, 1850, 2206
BseJI GATNNNNATC 3 cut(s) 507, 813, 1086
BseLI CCNNNNNNNGG 5 cut(s) 58, 212, 396, 944, 1341
BseMI GCAATG 2 cut(s) 1053, 2025
BseMII CTCAG 6 cut(s) 171, 1236, 1315, 1412, 1803, 2187
BseNI ACTGG 2 cut(s) 1064, 1547
BseRI GAGGAG 3 cut(s) 54, 289, 1640
BseXI GCAGC 3 cut(s) 226, 589, 2156
BsgI GTGCAG 1 cut(s) 821
Bsh1236I CGCG 1 cut(s) 318
BshFI GGCC 7 cut(s) 51, 248, 1056, 1060, 1982, 2184, 2367
BshNI GGYRCC 1 cut(s) 918
BsiSI CCGG 4 cut(s) 52, 367, 1057, 1132
BslFI GGGAC 4 cut(s) 600, 746, 1337, 1382
BslI CCNNNNNNNGG 5 cut(s) 58, 212, 396, 944, 1341
BsmAI GTCTC 3 cut(s) 331, 754, 1284
BsmFI GGGAC 4 cut(s) 600, 746, 1337, 1382
BsmI GAATGC 1 cut(s) 1447
BsnI GGCC 7 cut(s) 51, 248, 1056, 1060, 1982, 2184, 2367
Bsp13I TCCGGA 1 cut(s) 366
Bsp19I CCATGG 2 cut(s) 822, 2094
BspACI CCGC 7 cut(s) 127, 141, 271, 524, 1124, 1335, 1366
BspANI GGCC 7 cut(s) 51, 248, 1056, 1060, 1982, 2184, 2367
BspCNI CTCAG 6 cut(s) 172, 1237, 1314, 1411, 1802, 2188
BspEI TCCGGA 1 cut(s) 366
BspFNI CGCG 1 cut(s) 318
BspHI TCATGA 3 cut(s) 511, 1309, 2167
BspLI GGNNCC 9 cut(s) 522, 615, 616, 920, 1061, 1089, 1136, 1352, 1353
BspMI ACCTGC 2 cut(s) 1105, 2289
BspPI GGATC 7 cut(s) 195, 510, 839, 1082, 1095, 2172, 2316
BspT107I GGYRCC 1 cut(s) 918
BspTI CTTAAG 1 cut(s) 1196
BsrBI CCGCTC 1 cut(s) 1337
BsrDI GCAATG 2 cut(s) 1053, 2025
BsrFI RCCGGY 1 cut(s) 1056
BsrI ACTGG 2 cut(s) 1064, 1547
BssAI RCCGGY 1 cut(s) 1056
BssECI CCNNGG 6 cut(s) 243, 390, 413, 617, 822, 2094
BssNAI GTATAC 1 cut(s) 1330
BssSI CACGAG 2 cut(s) 288, 1976
BssT1I CCWWGG 4 cut(s) 243, 390, 822, 2094
Bst1107I GTATAC 1 cut(s) 1330
Bst2BI CACGAG 2 cut(s) 288, 1976
Bst2UI CCWGG 2 cut(s) 313, 619
Bst4CI ACNGT 7 cut(s) 342, 886, 923, 962, 1101, 1412, 1954
Bst6I CTCTTC 2 cut(s) 126, 228
BstAFI CTTAAG 1 cut(s) 1196
BstAPI GCANNNNNTGC 1 cut(s) 2153
BstC8I GCNNGC 6 cut(s) 600, 771, 1058, 1339, 1343, 1581
BstDSI CCRYGG 2 cut(s) 822, 2094
BstENI CCTNNNNNAGG 1 cut(s) 942
BstF5I GGATG 9 cut(s) 61, 67, 85, 443, 864, 1201, 1583, 1850, 2206
BstFNI CGCG 1 cut(s) 318
BstH2I RGCGCY 2 cut(s) 412, 638
BstHHI GCGC 5 cut(s) 318, 387, 411, 637, 2249
BstMAI GTCTC 3 cut(s) 331, 754, 1284
BstMWI GCNNNNNNNGC 7 cut(s) 245, 720, 1132, 2036, 2132, 2141, 2153
BstNI CCWGG 2 cut(s) 313, 619
BstNSI RCATGY 2 cut(s) 1811, 2111
BstSCI CCNGG 4 cut(s) 51, 311, 617, 1130
BstSFI CTRYAG 2 cut(s) 865, 904
BstUI CGCG 1 cut(s) 318
BstV1I GCAGC 3 cut(s) 226, 589, 2156
BstV2I GAAGAC 3 cut(s) 536, 1787, 2001
BstX2I RGATCY 2 cut(s) 187, 1087
BstYI RGATCY 2 cut(s) 187, 1087
BstZ17I GTATAC 1 cut(s) 1330
Bsu36I CCTNAGG 1 cut(s) 180
BsuRI GGCC 7 cut(s) 51, 248, 1056, 1060, 1982, 2184, 2367
BtgI CCRYGG 2 cut(s) 822, 2094
BtgZI GCGATG 2 cut(s) 333, 822
BtrI CACGTC 1 cut(s) 305
BtsCI GGATG 9 cut(s) 61, 67, 85, 443, 864, 1201, 1583, 1850, 2206
BtsI GCAGTG 5 cut(s) 142, 1352, 1539, 1900, 2037
BtsIMutI CAGTG 6 cut(s) 142, 1071, 1352, 1539, 1900, 2037
BveI ACCTGC 2 cut(s) 1105, 2289
Cac8I GCNNGC 6 cut(s) 600, 771, 1058, 1339, 1343, 1581
CciI TCATGA 3 cut(s) 511, 1309, 2167
CfoI GCGC 5 cut(s) 318, 387, 411, 637, 2249
Cfr10I RCCGGY 1 cut(s) 1056
Cfr13I GGNCC 6 cut(s) 196, 569, 614, 1059, 1351, 1714
Csp6I GTAC 4 cut(s) 285, 919, 1960, 2336
CviQI GTAC 4 cut(s) 285, 919, 1960, 2336
DraI TTTAAA 1 cut(s) 1987
DraIII CACNNNGTG 1 cut(s) 2153
DriI GACNNNNNGTC 1 cut(s) 817
EaeI YGGCCR 1 cut(s) 2182
Eam1104I CTCTTC 2 cut(s) 126, 228
Eam1105I GACNNNNNGTC 1 cut(s) 817
EarI CTCTTC 2 cut(s) 126, 228
EciI GGCGGA 1 cut(s) 513
Eco130I CCWWGG 4 cut(s) 243, 390, 822, 2094
Eco147I AGGCCT 2 cut(s) 248, 1982
Eco47I GGWCC 5 cut(s) 196, 569, 614, 1351, 1714
Eco47III AGCGCT 1 cut(s) 636
Eco57I CTGAAG 3 cut(s) 252, 1026, 1995
Eco81I CCTNAGG 1 cut(s) 180
EcoNI CCTNNNNNAGG 1 cut(s) 942
EcoO109I RGGNCCY 2 cut(s) 614, 1351
EcoRII CCWGG 2 cut(s) 311, 617
EcoT14I CCWWGG 4 cut(s) 243, 390, 822, 2094
ErhI CCWWGG 4 cut(s) 243, 390, 822, 2094
FaqI GGGAC 4 cut(s) 600, 746, 1337, 1382
FauI CCCGC 3 cut(s) 264, 1131, 1359
FauNDI CATATG 1 cut(s) 208
FbaI TGATCA 1 cut(s) 1081
FblI GTMKAC 2 cut(s) 75, 1329
Fnu4HI GCNGC 3 cut(s) 240, 603, 2145
FokI GGATG 9 cut(s) 68, 72, 74, 430, 871, 1188, 1570, 1837, 2213
FseI GGCCGGCC 1 cut(s) 1060
Fsp4HI GCNGC 3 cut(s) 240, 603, 2145
FspBI CTAG 6 cut(s) 426, 1490, 1878, 1917, 1940, 2157
FspI TGCGCA 1 cut(s) 2248
GlaI GCGC 5 cut(s) 317, 386, 410, 636, 2248
GluI GCNGC 3 cut(s) 240, 603, 2145
GsuI CTGGAG 1 cut(s) 2261
HaeII RGCGCY 2 cut(s) 412, 638
HaeIII GGCC 7 cut(s) 51, 248, 1056, 1060, 1982, 2184, 2367
HapII CCGG 4 cut(s) 52, 367, 1057, 1132
HhaI GCGC 5 cut(s) 318, 387, 411, 637, 2249
Hin6I GCGC 5 cut(s) 316, 385, 409, 635, 2247
HinP1I GCGC 5 cut(s) 316, 385, 409, 635, 2247
HindIII AAGCTT 2 cut(s) 1472, 2037
HpaII CCGG 4 cut(s) 52, 367, 1057, 1132
HphI GGTGA 7 cut(s) 25, 176, 890, 961, 1676, 1678, 2110
Hpy166II GTNNAC 3 cut(s) 76, 952, 1330
Hpy8I GTNNAC 3 cut(s) 76, 952, 1330
Hpy99I CGWCG 1 cut(s) 309
HpyAV CCTTC 2 cut(s) 1501, 2165
HpyCH4III ACNGT 7 cut(s) 342, 886, 923, 962, 1101, 1412, 1954
HpyCH4IV ACGT 4 cut(s) 304, 1912, 1972, 2149
HpyF10VI GCNNNNNNNGC 7 cut(s) 245, 720, 1132, 2036, 2132, 2141, 2153
HpySE526I ACGT 4 cut(s) 304, 1912, 1972, 2149
HspAI GCGC 5 cut(s) 316, 385, 409, 635, 2247
KflI GGGWCCC 2 cut(s) 614, 1351
Kpn2I TCCGGA 1 cut(s) 366
KpnI GGTACC 1 cut(s) 922
KroI GCCGGC 1 cut(s) 1056
KroNI GCCGGC 1 cut(s) 1058
Ksp22I TGATCA 1 cut(s) 1081
LmnI GCTCC 4 cut(s) 302, 323, 1140, 2000
Lsp1109I GCAGC 3 cut(s) 226, 589, 2156
LweI GCATC 8 cut(s) 94, 450, 452, 732, 1019, 1210, 1592, 1664
MaeI CTAG 6 cut(s) 426, 1490, 1878, 1917, 1940, 2157
MaeII ACGT 4 cut(s) 304, 1912, 1972, 2149
MaeIII GTNAC 5 cut(s) 886, 1406, 1828, 1973, 2316
MbiI CCGCTC 1 cut(s) 1337
MboII GAAGA 7 cut(s) 113, 245, 536, 1268, 1787, 1919, 2001
MfeI CAATTG 1 cut(s) 2321
MflI RGATCY 2 cut(s) 187, 1087
MlsI TGGCCA 1 cut(s) 2184
MluNI TGGCCA 1 cut(s) 2184
MlyI GAGTC 6 cut(s) 236, 1256, 1274, 1468, 1504, 1837
MmeI TCCRAC 3 cut(s) 649, 1229, 1615
Mox20I TGGCCA 1 cut(s) 2184
MroI TCCGGA 1 cut(s) 366
MroNI GCCGGC 1 cut(s) 1056
MroXI GAANNNNTTC 1 cut(s) 1317
MscI TGGCCA 1 cut(s) 2184
MslI CAYNNNNRTG 5 cut(s) 510, 740, 947, 1230, 2030
Msp20I TGGCCA 1 cut(s) 2184
MspCI CTTAAG 1 cut(s) 1196
MspI CCGG 4 cut(s) 52, 367, 1057, 1132
MspR9I CCNGG 4 cut(s) 53, 313, 619, 1132
MunI CAATTG 1 cut(s) 2321
Mva1269I GAATGC 1 cut(s) 1447
MvaI CCWGG 2 cut(s) 313, 619
MvnI CGCG 1 cut(s) 318
MwoI GCNNNNNNNGC 7 cut(s) 245, 720, 1132, 2036, 2132, 2141, 2153
NaeI GCCGGC 1 cut(s) 1058
NciI CCSGG 2 cut(s) 53, 1132
NcoI CCATGG 2 cut(s) 822, 2094
NdeI CATATG 1 cut(s) 208
NgoMIV GCCGGC 1 cut(s) 1056
NlaIV GGNNCC 9 cut(s) 522, 615, 616, 920, 1061, 1089, 1136, 1352, 1353
NmuCI GTSAC 4 cut(s) 1406, 1828, 1973, 2316
NsbI TGCGCA 1 cut(s) 2248
NspI RCATGY 2 cut(s) 1811, 2111
OliI CACNNNNGTG 2 cut(s) 947, 1230
PagI TCATGA 3 cut(s) 511, 1309, 2167
PceI AGGCCT 2 cut(s) 248, 1982
PciI ACATGT 1 cut(s) 1807
PctI GAATGC 1 cut(s) 1447
PdiI GCCGGC 1 cut(s) 1058
PdmI GAANNNNTTC 1 cut(s) 1317
PfeI GAWTC 4 cut(s) 467, 1001, 1318, 1943
PflFI GACNNNGTC 1 cut(s) 1246
PkrI GCNGC 3 cut(s) 241, 604, 2146
PleI GAGTC 6 cut(s) 235, 1255, 1273, 1467, 1503, 1837
PpsI GAGTC 6 cut(s) 235, 1255, 1273, 1467, 1503, 1837
PpuMI RGGWCCY 2 cut(s) 614, 1351
PscI ACATGT 1 cut(s) 1807
Psp1406I AACGTT 1 cut(s) 1912
Psp5II RGGWCCY 2 cut(s) 614, 1351
Psp6I CCWGG 2 cut(s) 311, 617
PspGI CCWGG 2 cut(s) 311, 617
PspN4I GGNNCC 9 cut(s) 522, 615, 616, 920, 1061, 1089, 1136, 1352, 1353
PspPI GGNCC 6 cut(s) 196, 569, 614, 1059, 1351, 1714
PspPPI RGGWCCY 2 cut(s) 614, 1351
PsuI RGATCY 2 cut(s) 187, 1087
PsyI GACNNNGTC 1 cut(s) 1246
RigI GGCCGGCC 1 cut(s) 1060
RsaI GTAC 4 cut(s) 286, 920, 1961, 2337
RsaNI GTAC 4 cut(s) 285, 919, 1960, 2336
RseI CAYNNNNRTG 5 cut(s) 510, 740, 947, 1230, 2030
SatI GCNGC 3 cut(s) 240, 603, 2145
Sau96I GGNCC 6 cut(s) 196, 569, 614, 1059, 1351, 1714
ScaI AGTACT 1 cut(s) 286
SchI GAGTC 6 cut(s) 236, 1256, 1274, 1468, 1504, 1837
ScrFI CCNGG 4 cut(s) 53, 313, 619, 1132
SfaNI GCATC 8 cut(s) 94, 450, 452, 732, 1019, 1210, 1592, 1664
SfcI CTRYAG 2 cut(s) 865, 904
SinI GGWCC 5 cut(s) 196, 569, 614, 1351, 1714
SmiMI CAYNNNNRTG 5 cut(s) 510, 740, 947, 1230, 2030
SmlI CTYRAG 3 cut(s) 200, 757, 1196
SmoI CTYRAG 3 cut(s) 200, 757, 1196
SseBI AGGCCT 2 cut(s) 248, 1982
SsiI CCGC 7 cut(s) 127, 141, 271, 524, 1124, 1335, 1366
SspMI CTAG 6 cut(s) 426, 1490, 1878, 1917, 1940, 2157
StuI AGGCCT 2 cut(s) 248, 1982
StyD4I CCNGG 4 cut(s) 51, 311, 617, 1130
StyI CCWWGG 4 cut(s) 243, 390, 822, 2094
TaaI ACNGT 7 cut(s) 342, 886, 923, 962, 1101, 1412, 1954
TaiI ACGT 4 cut(s) 307, 1915, 1975, 2152
TaqI TCGA 2 cut(s) 1498, 2221
TatI WGTACW 2 cut(s) 284, 2335
TfiI GAWTC 4 cut(s) 467, 1001, 1318, 1943
TscAI CASTG 6 cut(s) 142, 1071, 1352, 1546, 1900, 2037
TseFI GTSAC 4 cut(s) 1406, 1828, 1973, 2316
TseI GCWGC 3 cut(s) 239, 602, 2144
Tsp45I GTSAC 4 cut(s) 1406, 1828, 1973, 2316
TspDTI ATGAA 7 cut(s) 875, 1014, 1326, 1430, 1550, 2184, 2372
TspGWI ACGGA 1 cut(s) 1127
TspRI CASTG 6 cut(s) 142, 1071, 1352, 1546, 1900, 2037
Tth111I GACNNNGTC 1 cut(s) 1246
Vha464I CTTAAG 1 cut(s) 1196
VpaK11BI GGWCC 5 cut(s) 196, 569, 614, 1351, 1714
XagI CCTNNNNNAGG 1 cut(s) 942
XapI RAATTY 7 cut(s) 168, 221, 370, 1259, 1453, 1988, 2217
XbaI TCTAGA 2 cut(s) 1489, 1939
XceI RCATGY 2 cut(s) 1811, 2111
XmiI GTMKAC 2 cut(s) 75, 1329
XmnI GAANNNNTTC 1 cut(s) 1317
XspI CTAG 6 cut(s) 426, 1490, 1878, 1917, 1940, 2157
ZrmI AGTACT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.