Rw6G030700

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000165
Physical Location & Seq
Reverse (-)
54815032 .. 54817122
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G030700.1

Sequence Viewer

Length: 2091 bp
ATGGAGGAAACTATTGGAGACGATGAAGAACTCAAAGTGGGAATGCAAGTACACTCTGATGATGAGGCTTACAATTTATATAATACATATGCTTTGAGGAAGGGTTTTAGTGTTCGTAAAGGACATATTCGAAGAGATACATCAAATAACATCCGCCAACGAGAATTTCTATGTTCAAAGGAGGGGTTTGCAAGAGACGAGGATGTATTTCAACCAAACAAACACAGGAAGTTAGAAACAAGAGTGGGTTGTAAGGCTATGATATTATTTGTGGTGAAAGATGGAATATGGACAGTATCACAGATCAATTCAGATCATAACCATGAGCTTGCAAAGCCCGAAGAAAGGCAGTTTTTGAGATCAGGGCGAAAAATAACAGATGCTTGTGGAAATATATTTACTTCTATGAAGGATGCAGGCGTACGACCAACGAAATCATTTTTCTACATAGCAAATGAAGTGGGCGGTCCAGAAAATGTTGGGTTTACTAAGAAAGACGTCTATAACTACTTGCAAAGGAAAAAAAATGAAATGTTGGAAGCGGGTGATGCACAGAGCTTGCTGAATCACTTTAAGCGCAAACAAGGTGAGGATCCTAACTTTTTCTATTCAATGCAATTGGACCAATATAGCCGAATGACAAATTTCTTTTGGAGGGATAGTAGAGCAAAGTTGGATTATGATTGCTTTGGTGATGTTATATGCTTTGATACAACATTTCGTACGAACAAGTATAATTTGATTTGTGCGCCAATAGTTGGAGTTAATCATCATTGGAGAAATGTTTTGTTTGGATGTGCTTTTTTATTGGATGAGACTACAGAGTCATTTGTTTGGTTGTTTGAGTCATTTTTGGAGCCCATGGGAAATAAAGAACCAAAAACTGTTTTCACAGATGAAGATAAAGCAATGGCAAATGCAGTTAAAATAGTGTTTCCAAATGCATGTCATCGATTGTGCACTTGGCATATTGCCAAGAATGCCAGCAAGAGAATTGGCAGTTATCTTGGAAATCCTGAGTTCAAGAAACAGTTTAATCATTGTTTACATGGGTGCACTACTGAAATTGAATTTCAAGTTTCATGGGATGACCTGATTAGTAGATATAATGTTGGAGGTAATACTTGGCTCGCAAAGTTGTATTCACTTAGAGAGAAGTGGTGCCCAGCATTTAGTAGGGACATTTTTTCAGCAAAGATTAGATCGACTCAAAGGAGTGAAAGTACAAACAATGTGTTCCATCAAATCTCTACAAACACAATGGAGCTCATTGAATTTGTTCATCACTATGAGAAAAAGATAGAAGAGATGCGTTTAGCAGAGTTGGAAGATGACTACCGTTGCAAAAATGGTGCACCGCGTCCAAAAGTATGGAGTAAAATGTTAAGAAGTGCAGCCAAGGTTTATACTAACAAAATGTTTAAGCTTTTTGAATCAGAATTTGTTGGCTGTATGGGAGTCAGACTAAAAAAAGTGTCCAGCCTAGATAAAGTTCATATATATGAAGCAATTGAAGATGGTCATCAAAGTGTGCACAAGATTGAATATAACTCTACATCCTTGAGCATATCTTGTTCTTGTAAGTCATTTGAGTCACTTGGAATCTTATGTCGTCATGCTTTGAAGGTGTTTGATACTAATAATATCACTAGTTTACCAACTCAGTATGCATTGAAGAGGTGGACTAAAGAAGCAAAGAAAGGGATTGTGGTGAGCAATGATACAGGTGGAGGAACAAGTGAGAATTCAAAGTCTGCTAGAGTATTGCGCCTTAGCGAATTGATGCATGAAGGAAATACTGTGTATGACATAGCCTCACTAACTAGTTCAGGTACTAAAATTGTCAAGGACCTGTTAACAGAGGCCATGAAGAGCCTTGAAAAAGACAAGGACACCCTGTACGTGTTGGAAAATTTGAAGAAATATGGTGACGAGTCCGAGTCTGGCAATCCTGGTAATGAGCCACCAGTTTTGAATCCACCAAGTGCAAAGACCAAAGGAATGAAAAATGCTAGAATCAAAGATGTGAGGGAGACAAACCAACGAAAGAACAGAACAAAAGGTACATATATATCTGATGATTCCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

696

Amino Acids

79.93

Weight (kDa)

8.71

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 26 - 111 5.2e-21 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 198 - 315 4.2e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 233 - 327 1.9e-29 MULE transposase domain
SWIM PF04434 523 - 544 8.4e-07 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 823
AatII GACGTC 1 cut(s) 501
AccB1I GGYRCC 1 cut(s) 1161
AccB7I CCANNNNNTGG 1 cut(s) 758
AccII CGCG 1 cut(s) 1360
AciI CCGC 4 cut(s) 154, 465, 542, 1358
AclWI GGATC 2 cut(s) 587, 600
AcsI RAATTY 7 cut(s) 164, 643, 1070, 1274, 1439, 1744, 1912
AcyI GRCGYC 1 cut(s) 498
AdeI CACNNNGTG 1 cut(s) 1985
AfaI GTAC 7 cut(s) 51, 423, 724, 1225, 1834, 1901, 2065
AfiI CCNNNNNNNGG 2 cut(s) 345, 758
AflIII ACRYGT 1 cut(s) 1902
AhlI ACTAGT 2 cut(s) 1649, 1823
AjnI CCWGG 1 cut(s) 1951
AjuI GAANNNNNNNTTGG 2 cut(s) 150, 182
AluBI AGCT 4 cut(s) 328, 558, 1267, 1426
AluI AGCT 4 cut(s) 328, 558, 1267, 1426
Alw21I GWGCWC 5 cut(s) 962, 1058, 1269, 1357, 1536
Alw26I GTCTC 4 cut(s) 12, 189, 809, 2027
Alw44I GTGCAC 4 cut(s) 958, 1054, 1353, 1532
AlwI GGATC 2 cut(s) 587, 600
AoxI GGCC 1 cut(s) 1863
ApaLI GTGCAC 4 cut(s) 958, 1054, 1353, 1532
ApeKI GCWGC 1 cut(s) 1394
ApoI RAATTY 7 cut(s) 164, 643, 1070, 1274, 1439, 1744, 1912
Asp700I GAANNNNTTC 1 cut(s) 1278
AspLEI GCGC 3 cut(s) 579, 751, 1770
AspS9I GGNCC 3 cut(s) 467, 622, 1849
AsuHPI GGTGA 6 cut(s) 286, 557, 599, 704, 1723, 1940
AsuII TTCGAA 1 cut(s) 130
AvaII GGWCC 3 cut(s) 467, 622, 1849
BaeGI GKGCMC 5 cut(s) 962, 1058, 1166, 1357, 1536
BamHI GGATCC 1 cut(s) 592
BanI GGYRCC 1 cut(s) 1161
BanII GRGCYC 2 cut(s) 861, 1269
Bbv12I GWGCWC 5 cut(s) 962, 1058, 1269, 1357, 1536
BbvI GCAGC 1 cut(s) 1406
BccI CCATC 3 cut(s) 275, 1248, 1511
BciT130I CCWGG 1 cut(s) 1953
BcoDI GTCTC 4 cut(s) 12, 189, 809, 2027
BcuI ACTAGT 2 cut(s) 1649, 1823
BfaI CTAG 5 cut(s) 1484, 1650, 1758, 1824, 2013
BfmI CTRYAG 1 cut(s) 819
BisI GCNGC 1 cut(s) 1395
BlsI GCNGC 1 cut(s) 1396
Bme1390I CCNGG 1 cut(s) 1953
Bme18I GGWCC 3 cut(s) 467, 622, 1849
BmgT120I GGNCC 3 cut(s) 467, 622, 1849
BmiI GGNNCC 3 cut(s) 594, 858, 1163
BmrFI CCNGG 1 cut(s) 1953
BmsI GCATC 5 cut(s) 370, 403, 538, 1299, 1773
Bpu10I CCTNAGC 1 cut(s) 1772
Bpu14I TTCGAA 1 cut(s) 130
BpuEI CTTGAG 1 cut(s) 1582
Bsa29I ATCGAT 1 cut(s) 952
BsaAI YACGTR 1 cut(s) 1903
BsaBI GATNNNNATC 1 cut(s) 1521
BsaHI GRCGYC 1 cut(s) 498
BsaJI CCNNGG 2 cut(s) 861, 1398
BsaXI ACNNNNNCTCC 4 cut(s) 646, 676, 1207, 1237
Bsc4I CCNNNNNNNGG 2 cut(s) 345, 758
Bse1I ACTGG 1 cut(s) 1967
Bse3DI GCAATG 2 cut(s) 915, 1723
Bse8I GATNNNNATC 1 cut(s) 1521
BseBI CCWGG 1 cut(s) 1953
BseCI ATCGAT 1 cut(s) 952
BseDI CCNNGG 2 cut(s) 861, 1398
BseGI GGATG 7 cut(s) 150, 208, 418, 800, 817, 1093, 1556
BseJI GATNNNNATC 1 cut(s) 1521
BseLI CCNNNNNNNGG 2 cut(s) 345, 758
BseMI GCAATG 2 cut(s) 915, 1723
BseMII CTCAG 2 cut(s) 1008, 1676
BseNI ACTGG 1 cut(s) 1967
BseSI GKGCMC 5 cut(s) 962, 1058, 1166, 1357, 1536
BseXI GCAGC 1 cut(s) 1406
BseYI CCCAGC 1 cut(s) 1165
BsgI GTGCAG 1 cut(s) 1413
Bsh1236I CGCG 1 cut(s) 1360
BshFI GGCC 1 cut(s) 1865
BshNI GGYRCC 1 cut(s) 1161
BshVI ATCGAT 1 cut(s) 952
BsiHKAI GWGCWC 5 cut(s) 962, 1058, 1269, 1357, 1536
BsiWI CGTACG 2 cut(s) 421, 722
BslFI GGGAC 1 cut(s) 1193
BslI CCNNNNNNNGG 2 cut(s) 345, 758
BsmAI GTCTC 4 cut(s) 12, 189, 809, 2027
BsmBI CGTCTC 2 cut(s) 12, 189
BsmFI GGGAC 1 cut(s) 1193
BsmI GAATGC 2 cut(s) 48, 985
BsnI GGCC 1 cut(s) 1865
Bsp119I TTCGAA 1 cut(s) 130
Bsp1286I GDGCHC 7 cut(s) 861, 962, 1058, 1166, 1269, 1357, 1536
Bsp143I GATC 5 cut(s) 303, 313, 359, 592, 1202
Bsp19I CCATGG 1 cut(s) 861
BspACI CCGC 4 cut(s) 154, 465, 542, 1358
BspANI GGCC 1 cut(s) 1865
BspCNI CTCAG 2 cut(s) 1009, 1675
BspDI ATCGAT 1 cut(s) 952
BspFNI CGCG 1 cut(s) 1360
BspLI GGNNCC 3 cut(s) 594, 858, 1163
BspPI GGATC 2 cut(s) 587, 600
BspQI GCTCTTC 1 cut(s) 1865
BspT104I TTCGAA 1 cut(s) 130
BspT107I GGYRCC 1 cut(s) 1161
BsrDI GCAATG 2 cut(s) 915, 1723
BsrI ACTGG 1 cut(s) 1967
BssECI CCNNGG 2 cut(s) 861, 1398
BssMI GATC 5 cut(s) 303, 313, 359, 592, 1202
BssNI GRCGYC 1 cut(s) 498
BssT1I CCWWGG 2 cut(s) 861, 1398
Bst2UI CCWGG 1 cut(s) 1953
Bst4CI ACNGT 5 cut(s) 295, 886, 1032, 1340, 1801
Bst6I CTCTTC 4 cut(s) 127, 1299, 1670, 1865
BstACI GRCGYC 1 cut(s) 498
BstBAI YACGTR 1 cut(s) 1903
BstBI TTCGAA 1 cut(s) 130
BstC8I GCNNGC 5 cut(s) 330, 418, 560, 985, 1131
BstDEI CTNAG 5 cut(s) 489, 1017, 1148, 1662, 1772
BstDSI CCRYGG 1 cut(s) 861
BstF5I GGATG 7 cut(s) 150, 208, 418, 800, 817, 1093, 1556
BstFNI CGCG 1 cut(s) 1360
BstHHI GCGC 3 cut(s) 579, 751, 1770
BstKTI GATC 5 cut(s) 306, 316, 362, 595, 1205
BstMAI GTCTC 4 cut(s) 12, 189, 809, 2027
BstMBI GATC 5 cut(s) 303, 313, 359, 592, 1202
BstMWI GCNNNNNNNGC 3 cut(s) 334, 548, 980
BstNI CCWGG 1 cut(s) 1953
BstNSI RCATGY 1 cut(s) 948
BstSCI CCNGG 1 cut(s) 1951
BstSFI CTRYAG 1 cut(s) 819
BstSLI GKGCMC 5 cut(s) 962, 1058, 1166, 1357, 1536
BstUI CGCG 1 cut(s) 1360
BstV1I GCAGC 1 cut(s) 1406
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 1 cut(s) 1371
BstYI RGATCY 1 cut(s) 592
Bsu15I ATCGAT 1 cut(s) 952
BsuRI GGCC 1 cut(s) 1865
BsuTUI ATCGAT 1 cut(s) 952
BtgI CCRYGG 1 cut(s) 861
BtsCI GGATG 7 cut(s) 150, 208, 418, 800, 817, 1093, 1556
Cac8I GCNNGC 5 cut(s) 330, 418, 560, 985, 1131
CfoI GCGC 3 cut(s) 579, 751, 1770
Cfr13I GGNCC 3 cut(s) 467, 622, 1849
ClaI ATCGAT 1 cut(s) 952
CseI GACGC 1 cut(s) 1349
Csp6I GTAC 7 cut(s) 50, 422, 723, 1224, 1833, 1900, 2064
CspCI CAANNNNNGTGG 4 cut(s) 441, 476, 1953, 1988
CviAII CATG 8 cut(s) 323, 862, 945, 1049, 1083, 1616, 1787, 1867
CviQI GTAC 7 cut(s) 50, 422, 723, 1224, 1833, 1900, 2064
DdeI CTNAG 5 cut(s) 489, 1017, 1148, 1662, 1772
DpnI GATC 5 cut(s) 305, 315, 361, 594, 1204
DpnII GATC 5 cut(s) 303, 313, 359, 592, 1202
DraIII CACNNNGTG 1 cut(s) 1985
DrdI GACNNNNNNGTC 1 cut(s) 823
DseDI GACNNNNNNGTC 1 cut(s) 823
Eam1104I CTCTTC 4 cut(s) 127, 1299, 1670, 1865
EarI CTCTTC 4 cut(s) 127, 1299, 1670, 1865
EciI GGCGGA 1 cut(s) 143
Ecl136II GAGCTC 1 cut(s) 1267
Eco130I CCWWGG 2 cut(s) 861, 1398
Eco24I GRGCYC 2 cut(s) 861, 1269
Eco47I GGWCC 3 cut(s) 467, 622, 1849
Eco53kI GAGCTC 1 cut(s) 1267
EcoICRI GAGCTC 1 cut(s) 1267
EcoO109I RGGNCCY 1 cut(s) 1849
EcoRI GAATTC 1 cut(s) 1744
EcoRII CCWGG 1 cut(s) 1951
EcoT14I CCWWGG 2 cut(s) 861, 1398
EcoT22I ATGCAT 3 cut(s) 946, 1672, 1788
EcoT38I GRGCYC 2 cut(s) 861, 1269
ErhI CCWWGG 2 cut(s) 861, 1398
Esp3I CGTCTC 2 cut(s) 12, 189
FaeI CATG 8 cut(s) 326, 865, 948, 1052, 1086, 1619, 1790, 1870
FaqI GGGAC 1 cut(s) 1193
FatI CATG 8 cut(s) 322, 861, 944, 1048, 1082, 1615, 1786, 1866
FauI CCCGC 1 cut(s) 535
FauNDI CATATG 1 cut(s) 88
Fnu4HI GCNGC 1 cut(s) 1395
FokI GGATG 7 cut(s) 137, 215, 425, 807, 824, 1100, 1543
FriOI GRGCYC 2 cut(s) 861, 1269
Fsp4HI GCNGC 1 cut(s) 1395
FspBI CTAG 5 cut(s) 1484, 1650, 1758, 1824, 2013
GlaI GCGC 3 cut(s) 578, 750, 1769
GluI GCNGC 1 cut(s) 1395
GsaI CCCAGC 1 cut(s) 1169
HaeIII GGCC 1 cut(s) 1865
HgaI GACGC 1 cut(s) 1349
HhaI GCGC 3 cut(s) 579, 751, 1770
Hin1I GRCGYC 1 cut(s) 498
Hin1II CATG 8 cut(s) 326, 865, 948, 1052, 1086, 1619, 1790, 1870
Hin6I GCGC 3 cut(s) 577, 749, 1768
HinP1I GCGC 3 cut(s) 577, 749, 1768
HincII GTYRAC 1 cut(s) 1857
HindII GTYRAC 1 cut(s) 1857
HindIII AAGCTT 1 cut(s) 1424
HpaI GTTAAC 1 cut(s) 1857
HphI GGTGA 6 cut(s) 286, 557, 599, 704, 1723, 1940
Hpy188I TCNGA 6 cut(s) 58, 313, 1438, 1463, 1939, 2077
Hpy188III TCNNGA 3 cut(s) 470, 1016, 1024
HpyAV CCTTC 4 cut(s) 94, 403, 1618, 1784
HpyCH4III ACNGT 5 cut(s) 295, 886, 1032, 1340, 1801
HpyCH4IV ACGT 2 cut(s) 498, 1902
HpyF10VI GCNNNNNNNGC 3 cut(s) 334, 548, 980
HpyF3I CTNAG 5 cut(s) 489, 1017, 1148, 1662, 1772
HpySE526I ACGT 2 cut(s) 498, 1902
Hsp92I GRCGYC 1 cut(s) 498
Hsp92II CATG 8 cut(s) 326, 865, 948, 1052, 1086, 1619, 1790, 1870
HspAI GCGC 3 cut(s) 577, 749, 1768
KspAI GTTAAC 1 cut(s) 1857
Kzo9I GATC 5 cut(s) 303, 313, 359, 592, 1202
LguI GCTCTTC 1 cut(s) 1865
LmnI GCTCC 2 cut(s) 856, 1264
Lsp1109I GCAGC 1 cut(s) 1406
LweI GCATC 5 cut(s) 370, 403, 538, 1299, 1773
MaeI CTAG 5 cut(s) 1484, 1650, 1758, 1824, 2013
MaeII ACGT 2 cut(s) 498, 1902
MaeIII GTNAC 2 cut(s) 1593, 1928
MalI GATC 5 cut(s) 305, 315, 361, 594, 1204
MboI GATC 5 cut(s) 303, 313, 359, 592, 1202
MfeI CAATTG 2 cut(s) 617, 1509
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 7 cut(s) 861, 962, 1058, 1166, 1269, 1357, 1536
MlyI GAGTC 7 cut(s) 833, 854, 1201, 1467, 1601, 1943, 1949
MmeI TCCRAC 6 cut(s) 516, 654, 739, 1093, 1305, 1887
Mph1103I ATGCAT 3 cut(s) 946, 1672, 1788
MroXI GAANNNNTTC 1 cut(s) 1278
MseI TTAA 7 cut(s) 573, 765, 924, 1035, 1385, 1422, 1856
MslI CAYNNNNRTG 5 cut(s) 57, 321, 1287, 1500, 1527
MspR9I CCNGG 1 cut(s) 1953
MunI CAATTG 2 cut(s) 617, 1509
Mva1269I GAATGC 2 cut(s) 48, 985
MvaI CCWGG 1 cut(s) 1953
MvnI CGCG 1 cut(s) 1360
MwoI GCNNNNNNNGC 3 cut(s) 334, 548, 980
NcoI CCATGG 1 cut(s) 861
NdeI CATATG 1 cut(s) 88
NdeII GATC 5 cut(s) 303, 313, 359, 592, 1202
NlaIII CATG 8 cut(s) 326, 865, 948, 1052, 1086, 1619, 1790, 1870
NlaIV GGNNCC 3 cut(s) 594, 858, 1163
NmuCI GTSAC 2 cut(s) 1593, 1928
NsiI ATGCAT 3 cut(s) 946, 1672, 1788
NspI RCATGY 1 cut(s) 948
NspV TTCGAA 1 cut(s) 130
PciSI GCTCTTC 1 cut(s) 1865
PctI GAATGC 2 cut(s) 48, 985
PdmI GAANNNNTTC 1 cut(s) 1278
PfeI GAWTC 6 cut(s) 565, 1433, 1602, 1975, 2016, 2081
Pfl23II CGTACG 2 cut(s) 421, 722
PflMI CCANNNNNTGG 1 cut(s) 758
PkrI GCNGC 1 cut(s) 1396
PleI GAGTC 7 cut(s) 832, 853, 1201, 1466, 1600, 1942, 1948
PpsI GAGTC 7 cut(s) 832, 853, 1201, 1466, 1600, 1942, 1948
Ppu21I YACGTR 1 cut(s) 1903
PpuMI RGGWCCY 1 cut(s) 1849
Psp124BI GAGCTC 1 cut(s) 1269
Psp5II RGGWCCY 1 cut(s) 1849
Psp6I CCWGG 1 cut(s) 1951
PspFI CCCAGC 1 cut(s) 1165
PspGI CCWGG 1 cut(s) 1951
PspLI CGTACG 2 cut(s) 421, 722
PspN4I GGNNCC 3 cut(s) 594, 858, 1163
PspPI GGNCC 3 cut(s) 467, 622, 1849
PspPPI RGGWCCY 1 cut(s) 1849
PsrI GAACNNNNNNTAC 2 cut(s) 2047, 2079
PsuI RGATCY 1 cut(s) 592
RsaI GTAC 7 cut(s) 51, 423, 724, 1225, 1834, 1901, 2065
RsaNI GTAC 7 cut(s) 50, 422, 723, 1224, 1833, 1900, 2064
RseI CAYNNNNRTG 5 cut(s) 57, 321, 1287, 1500, 1527
SacI GAGCTC 1 cut(s) 1269
SapI GCTCTTC 1 cut(s) 1865
SaqAI TTAA 7 cut(s) 573, 765, 924, 1035, 1385, 1422, 1856
SatI GCNGC 1 cut(s) 1395
Sau3AI GATC 5 cut(s) 303, 313, 359, 592, 1202
Sau96I GGNCC 3 cut(s) 467, 622, 1849
SchI GAGTC 7 cut(s) 833, 854, 1201, 1467, 1601, 1943, 1949
ScrFI CCNGG 1 cut(s) 1953
SduI GDGCHC 7 cut(s) 861, 962, 1058, 1166, 1269, 1357, 1536
SfaNI GCATC 5 cut(s) 370, 403, 538, 1299, 1773
SfcI CTRYAG 1 cut(s) 819
SfuI TTCGAA 1 cut(s) 130
SinI GGWCC 3 cut(s) 467, 622, 1849
SmiMI CAYNNNNRTG 5 cut(s) 57, 321, 1287, 1500, 1527
SmlI CTYRAG 1 cut(s) 1561
SmoI CTYRAG 1 cut(s) 1561
SpeI ACTAGT 2 cut(s) 1649, 1823
SsiI CCGC 4 cut(s) 154, 465, 542, 1358
SspMI CTAG 5 cut(s) 1484, 1650, 1758, 1824, 2013
SstI GAGCTC 1 cut(s) 1269
StyD4I CCNGG 1 cut(s) 1951
StyI CCWWGG 2 cut(s) 861, 1398
TaaI ACNGT 5 cut(s) 295, 886, 1032, 1340, 1801
TaiI ACGT 2 cut(s) 501, 1905
TaqI TCGA 3 cut(s) 130, 952, 1205
TatI WGTACW 2 cut(s) 49, 1223
TfiI GAWTC 6 cut(s) 565, 1433, 1602, 1975, 2016, 2081
Tru1I TTAA 7 cut(s) 573, 765, 924, 1035, 1385, 1422, 1856
Tru9I TTAA 7 cut(s) 573, 765, 924, 1035, 1385, 1422, 1856
TseFI GTSAC 2 cut(s) 1593, 1928
TseI GCWGC 1 cut(s) 1394
Tsp45I GTSAC 2 cut(s) 1593, 1928
Van91I CCANNNNNTGG 1 cut(s) 758
VneI GTGCAC 4 cut(s) 958, 1054, 1353, 1532
VpaK11BI GGWCC 3 cut(s) 467, 622, 1849
XapI RAATTY 7 cut(s) 164, 643, 1070, 1274, 1439, 1744, 1912
XceI RCATGY 1 cut(s) 948
XmnI GAANNNNTTC 1 cut(s) 1278
XspI CTAG 5 cut(s) 1484, 1650, 1758, 1824, 2013
ZraI GACGTC 1 cut(s) 499
Zsp2I ATGCAT 3 cut(s) 946, 1672, 1788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.