Rorug05G0275900

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000165
Physical Location & Seq
Forward (+)
31153689 .. 31157574
3886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0275900.1

Sequence Viewer

Length: 1263 bp
ATGATGCAACAGCCATCAGGAGGAGTCGTCCCGGCGGATCAGCAGCCGCAGCAGCAGTACCAGCAGCAACCGCCGCAGCAGTGGATGATGATGCCGCCGCAGCAGCAGCAACACCAAGCTGCCGCTGCTCAGGCCGCCCAGGCCGGGTGGGCCCAGCAGCAGGCGGCTATGCAGCAGCAGCAGCAGCAGCAGCCTCAGCAGTACACGGCCGCGGCGGCGGGTCAGGGCTCCGATGAGATCCGATCGCTCTGGATCGGCGACTTGCTCCAGTGGATGGACGAGAACTACATCCTCAACTGCTTCGGTCCCACCGGAGAGGCTGTGAATGCAAAGGTTATCCGTAACAAGCAAACAGGACTGCCAGAAGGGTATGGTTTTATTGAGTTTAGGACTCGCAGTGCGGCTGAGCAGGTTTTGCAGAACTACAATGGTACGGTGATGCCCAACACCGAGCAGAATTTCCGCCTCAACTGGGCCACCCTGGGGGCTGGTGAAAGGCGCCAGGATGATGGCCCGGACTATACTGTTTTTGTTGGCGATTTGGCCGCTGATGTTACCGATTACACCCTTCAAGAGACATTTAGGGCTCATTACCACTCTGTGAAGGGTGCAAAAGTTGTCACTGATAGGACCACCGGACGCTCTAAGGGATATGGTTTTGTTAGGTTTGGAGATGAAAGTGAACAGTTGCGAGCAATGAATGAGATGAATGGTCAGTTTTGCTCTAGCAGACCCATGAGGATTGGGCCTGCTGCTACTAAGAAACCAGTTGGTGGTGGACAACCATTTCAAAAAGCTGCCTACCCAAGTTCTCAAGGAAATCCTGGTGAGGCTGACCCAAATAACACAACAATATTTGTTGGGGGTTTGGATCCCAGTGTCGATGATGAAATGTTGAGACAATCTTTTGGCATGTTTGGTGAGCTAGTTCATGTGAAGATACCAGTTGGCAAGCGATGTGGTTTTGTTCAATTTGCTAACAGAGCTTGTGCGGAGCAAGCATTGTCGGTGATGAATGGGCGAGTAGTGGGATCACAAAGTGTCAGACTTTCTTGGGGCCGTAGTCCTTCAAGCAAACAGAACCAGCCAGAACAGACACAGTGGAATGGTGCTGGTGGTGCTGGATTTTATCAATATCCCCAAGGATATGATGCGTATACATATGCACCTCCTACCCAAGACCCTAACCTGTACTATGGAGGGTATGCTGGATATGGAAATTACCAGCAGCCTGGTGCAGCTTACCAACAGCAACAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

420

Amino Acids

46.28

Weight (kDa)

5.68

Isoelectric Point (pI)

55.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 83 - 151 5.8e-11 RNA recognition motif
RRM_1 PF00076 176 - 246 8e-15 RNA recognition motif
RRM_1 PF00076 285 - 348 1.9e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 400
AccB1I GGYRCC 1 cut(s) 498
AccB7I CCANNNNNTGG 2 cut(s) 274, 773
AccI GTMKAC 1 cut(s) 1157
AccII CGCG 1 cut(s) 212
AclWI GGATC 6 cut(s) 45, 232, 260, 866, 879, 1039
AcoI YGGCCR 2 cut(s) 207, 543
AcsI RAATTY 1 cut(s) 457
AcyI GRCGYC 1 cut(s) 499
AdeI CACNNNGTG 2 cut(s) 601, 1040
AfaI GTAC 4 cut(s) 59, 203, 433, 1193
AfiI CCNNNNNNNGG 7 cut(s) 20, 144, 160, 274, 472, 483, 773
AgsI TTSAA 4 cut(s) 572, 791, 971, 1071
AjnI CCWGG 5 cut(s) 138, 480, 501, 823, 1231
AluBI AGCT 5 cut(s) 119, 797, 925, 986, 1241
AluI AGCT 5 cut(s) 119, 797, 925, 986, 1241
Alw26I GTCTC 2 cut(s) 569, 892
AlwI GGATC 6 cut(s) 45, 232, 260, 866, 879, 1039
AoxI GGCC 9 cut(s) 132, 141, 150, 207, 474, 511, 543, 746, 1057
ApaI GGGCCC 1 cut(s) 154
ApoI RAATTY 1 cut(s) 457
AspLEI GCGC 1 cut(s) 501
AspS9I GGNCC 8 cut(s) 150, 151, 305, 474, 512, 630, 746, 1057
AsuC2I CCSGG 3 cut(s) 32, 145, 515
AsuHPI GGTGA 5 cut(s) 448, 503, 839, 932, 1021
AvaII GGWCC 2 cut(s) 305, 630
BaeGI GKGCMC 1 cut(s) 154
BamHI GGATCC 1 cut(s) 871
BanI GGYRCC 1 cut(s) 498
BanII GRGCYC 3 cut(s) 154, 230, 589
BbvCI CCTCAGC 1 cut(s) 195
BccI CCATC 3 cut(s) 22, 268, 503
BceAI ACGGC 2 cut(s) 222, 1044
BciT130I CCWGG 5 cut(s) 140, 482, 503, 825, 1233
BcnI CCSGG 3 cut(s) 32, 145, 515
BcoDI GTCTC 2 cut(s) 569, 892
BfaI CTAG 2 cut(s) 726, 926
BfoI RGCGCY 1 cut(s) 502
BfuAI ACCTGC 1 cut(s) 400
BglI GCCNNNNNGGC 3 cut(s) 140, 149, 215
BlpI GCTNAGC 1 cut(s) 405
Bme1390I CCNGG 8 cut(s) 32, 140, 145, 482, 503, 515, 825, 1233
Bme18I GGWCC 2 cut(s) 305, 630
BmgT120I GGNCC 8 cut(s) 150, 151, 305, 474, 512, 630, 746, 1057
BmiI GGNNCC 6 cut(s) 152, 229, 307, 500, 873, 1058
BmrFI CCNGG 8 cut(s) 32, 140, 145, 482, 503, 515, 825, 1233
BmrI ACTGGG 2 cut(s) 481, 870
BmsI GCATC 3 cut(s) 81, 429, 1141
BmuI ACTGGG 2 cut(s) 481, 870
BpmI CTGGAG 1 cut(s) 251
Bpu10I CCTNAGC 2 cut(s) 129, 195
Bpu1102I GCTNAGC 1 cut(s) 405
BpuEI CTTGAG 1 cut(s) 798
BpuMI CCSGG 3 cut(s) 32, 145, 515
BsaHI GRCGYC 1 cut(s) 499
BsaJI CCNNGG 5 cut(s) 138, 210, 480, 481, 1141
BsaWI WCCGGW 2 cut(s) 311, 635
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 306, 336
Bsc4I CCNNNNNNNGG 7 cut(s) 20, 144, 160, 274, 472, 483, 773
Bse1I ACTGG 5 cut(s) 268, 476, 767, 876, 944
Bse3DI GCAATG 1 cut(s) 702
BseBI CCWGG 5 cut(s) 140, 482, 503, 825, 1233
BseDI CCNNGG 5 cut(s) 138, 210, 480, 481, 1141
BseGI GGATG 4 cut(s) 90, 279, 288, 511
BseLI CCNNNNNNNGG 7 cut(s) 20, 144, 160, 274, 472, 483, 773
BseMI GCAATG 1 cut(s) 702
BseMII CTCAG 3 cut(s) 143, 209, 396
BseNI ACTGG 5 cut(s) 268, 476, 767, 876, 944
BseRI GAGGAG 1 cut(s) 36
BseSI GKGCMC 1 cut(s) 154
BseX3I CGGCCG 1 cut(s) 207
BseYI CCCAGC 1 cut(s) 153
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 1 cut(s) 212
Bsh1285I CGRYCG 2 cut(s) 210, 245
BshFI GGCC 9 cut(s) 134, 143, 152, 209, 476, 513, 545, 748, 1059
BshNI GGYRCC 1 cut(s) 498
BsiEI CGRYCG 2 cut(s) 210, 245
BsiSI CCGG 5 cut(s) 32, 144, 312, 515, 636
BslFI GGGAC 2 cut(s) 14, 291
BslI CCNNNNNNNGG 7 cut(s) 20, 144, 160, 274, 472, 483, 773
BsmAI GTCTC 2 cut(s) 569, 892
BsmFI GGGAC 2 cut(s) 14, 291
BsmI GAATGC 1 cut(s) 331
BsnI GGCC 9 cut(s) 134, 143, 152, 209, 476, 513, 545, 748, 1059
Bsp120I GGGCCC 1 cut(s) 150
Bsp1286I GDGCHC 3 cut(s) 154, 230, 589
Bsp143I GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
Bsp1720I GCTNAGC 1 cut(s) 405
BspANI GGCC 9 cut(s) 134, 143, 152, 209, 476, 513, 545, 748, 1059
BspCNI CTCAG 3 cut(s) 142, 208, 397
BspFNI CGCG 1 cut(s) 212
BspLI GGNNCC 6 cut(s) 152, 229, 307, 500, 873, 1058
BspMI ACCTGC 1 cut(s) 400
BspPI GGATC 6 cut(s) 45, 232, 260, 866, 879, 1039
BspT107I GGYRCC 1 cut(s) 498
BsrDI GCAATG 1 cut(s) 702
BsrI ACTGG 5 cut(s) 268, 476, 767, 876, 944
BssECI CCNNGG 5 cut(s) 138, 210, 480, 481, 1141
BssMI GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
BssNAI GTATAC 1 cut(s) 1158
BssNI GRCGYC 1 cut(s) 499
BssT1I CCWWGG 1 cut(s) 1141
Bst1107I GTATAC 1 cut(s) 1158
Bst2UI CCWGG 5 cut(s) 140, 482, 503, 825, 1233
Bst4CI ACNGT 4 cut(s) 436, 526, 687, 1101
BstACI GRCGYC 1 cut(s) 499
BstAPI GCANNNNNTGC 1 cut(s) 415
BstC8I GCNNGC 5 cut(s) 162, 693, 750, 953, 999
BstDEI CTNAG 5 cut(s) 129, 195, 405, 645, 759
BstDSI CCRYGG 1 cut(s) 210
BstF5I GGATG 4 cut(s) 90, 279, 288, 511
BstFNI CGCG 1 cut(s) 212
BstH2I RGCGCY 1 cut(s) 502
BstHHI GCGC 1 cut(s) 501
BstKTI GATC 6 cut(s) 40, 240, 245, 255, 874, 1034
BstMAI GTCTC 2 cut(s) 569, 892
BstMBI GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
BstMCI CGRYCG 2 cut(s) 210, 245
BstNI CCWGG 5 cut(s) 140, 482, 503, 825, 1233
BstNSI RCATGY 1 cut(s) 916
BstSCI CCNGG 8 cut(s) 30, 138, 143, 480, 501, 513, 823, 1231
BstSLI GKGCMC 1 cut(s) 154
BstUI CGCG 1 cut(s) 212
BstX2I RGATCY 2 cut(s) 237, 871
BstXI CCANNNNNNTGG 2 cut(s) 509, 1232
BstYI RGATCY 2 cut(s) 237, 871
BstZ17I GTATAC 1 cut(s) 1158
BstZI CGGCCG 1 cut(s) 207
BsuRI GGCC 9 cut(s) 134, 143, 152, 209, 476, 513, 545, 748, 1059
BtgI CCRYGG 1 cut(s) 210
BtgZI GCGATG 1 cut(s) 970
BtsCI GGATG 4 cut(s) 90, 279, 288, 511
BtsI GCAGTG 2 cut(s) 86, 403
BtsIMutI CAGTG 6 cut(s) 86, 275, 403, 621, 883, 1106
BveI ACCTGC 1 cut(s) 400
Cac8I GCNNGC 5 cut(s) 162, 693, 750, 953, 999
CfoI GCGC 1 cut(s) 501
Cfr13I GGNCC 8 cut(s) 150, 151, 305, 474, 512, 630, 746, 1057
Cfr42I CCGCGG 1 cut(s) 213
CseI GACGC 1 cut(s) 648
Csp6I GTAC 4 cut(s) 58, 202, 432, 1192
CspCI CAANNNNNGTGG 2 cut(s) 940, 975
CviAII CATG 3 cut(s) 736, 913, 932
CviQI GTAC 4 cut(s) 58, 202, 432, 1192
DdeI CTNAG 5 cut(s) 129, 195, 405, 645, 759
DinI GGCGCC 1 cut(s) 500
DpnI GATC 6 cut(s) 39, 239, 244, 254, 873, 1033
DpnII GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
DraIII CACNNNGTG 2 cut(s) 601, 1040
EaeI YGGCCR 2 cut(s) 207, 543
EagI CGGCCG 1 cut(s) 207
EciI GGCGGA 2 cut(s) 50, 452
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 1 cut(s) 1141
Eco24I GRGCYC 3 cut(s) 154, 230, 589
Eco47I GGWCC 2 cut(s) 305, 630
Eco52I CGGCCG 1 cut(s) 207
EcoRII CCWGG 5 cut(s) 138, 480, 501, 823, 1231
EcoT14I CCWWGG 1 cut(s) 1141
EcoT38I GRGCYC 3 cut(s) 154, 230, 589
EgeI GGCGCC 1 cut(s) 500
EheI GGCGCC 1 cut(s) 500
ErhI CCWWGG 1 cut(s) 1141
FaeI CATG 3 cut(s) 739, 916, 935
FaqI GGGAC 2 cut(s) 14, 291
FatI CATG 3 cut(s) 735, 912, 931
FauI CCCGC 1 cut(s) 211
FauNDI CATATG 1 cut(s) 1162
FblI GTMKAC 1 cut(s) 1157
FokI GGATG 4 cut(s) 97, 275, 286, 518
FriOI GRGCYC 3 cut(s) 154, 230, 589
FspBI CTAG 2 cut(s) 726, 926
GlaI GCGC 1 cut(s) 500
GsaI CCCAGC 1 cut(s) 157
GsuI CTGGAG 1 cut(s) 251
HaeII RGCGCY 1 cut(s) 502
HaeIII GGCC 9 cut(s) 134, 143, 152, 209, 476, 513, 545, 748, 1059
HapII CCGG 5 cut(s) 32, 144, 312, 515, 636
HgaI GACGC 1 cut(s) 648
HhaI GCGC 1 cut(s) 501
Hin1I GRCGYC 1 cut(s) 499
Hin1II CATG 3 cut(s) 739, 916, 935
Hin6I GCGC 1 cut(s) 499
HinP1I GCGC 1 cut(s) 499
HinfI GANTC 2 cut(s) 24, 391
HpaII CCGG 5 cut(s) 32, 144, 312, 515, 636
HphI GGTGA 5 cut(s) 448, 503, 839, 932, 1021
Hpy166II GTNNAC 4 cut(s) 204, 683, 779, 1158
Hpy188I TCNGA 3 cut(s) 232, 242, 1046
Hpy188III TCNNGA 3 cut(s) 18, 250, 572
Hpy8I GTNNAC 4 cut(s) 204, 683, 779, 1158
HpyAV CCTTC 4 cut(s) 359, 578, 598, 1077
HpyCH4III ACNGT 4 cut(s) 436, 526, 687, 1101
HpyCH4V TGCA 7 cut(s) 7, 172, 329, 418, 611, 1166, 1238
HpyF3I CTNAG 5 cut(s) 129, 195, 405, 645, 759
Hsp92I GRCGYC 1 cut(s) 499
Hsp92II CATG 3 cut(s) 739, 916, 935
HspAI GCGC 1 cut(s) 499
KasI GGCGCC 1 cut(s) 498
KspI CCGCGG 1 cut(s) 213
Kzo9I GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
LmnI GCTCC 3 cut(s) 233, 270, 994
LweI GCATC 3 cut(s) 81, 429, 1141
MaeI CTAG 2 cut(s) 726, 926
MaeIII GTNAC 3 cut(s) 341, 553, 619
MalI GATC 6 cut(s) 39, 239, 244, 254, 873, 1033
MboI GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
MboII GAAGA 1 cut(s) 949
MflI RGATCY 2 cut(s) 237, 871
MhlI GDGCHC 3 cut(s) 154, 230, 589
MluCI AATT 3 cut(s) 457, 971, 1219
Mly113I GGCGCC 1 cut(s) 499
MlyI GAGTC 2 cut(s) 33, 385
MnlI CCTC 9 cut(s) 14, 204, 302, 310, 476, 732, 823, 1179, 1193
MspA1I CMGCKG 3 cut(s) 125, 212, 548
MspI CCGG 5 cut(s) 32, 144, 312, 515, 636
MspR9I CCNGG 8 cut(s) 32, 140, 145, 482, 503, 515, 825, 1233
Mva1269I GAATGC 1 cut(s) 331
MvaI CCWGG 5 cut(s) 140, 482, 503, 825, 1233
MvnI CGCG 1 cut(s) 212
NarI GGCGCC 1 cut(s) 499
NciI CCSGG 3 cut(s) 32, 145, 515
NdeI CATATG 1 cut(s) 1162
NdeII GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
NlaIII CATG 3 cut(s) 739, 916, 935
NlaIV GGNNCC 6 cut(s) 152, 229, 307, 500, 873, 1058
NmuCI GTSAC 1 cut(s) 619
NspI RCATGY 1 cut(s) 916
PasI CCCWGGG 1 cut(s) 481
PctI GAATGC 1 cut(s) 331
PflMI CCANNNNNTGG 2 cut(s) 274, 773
Ple19I CGATCG 1 cut(s) 245
PleI GAGTC 2 cut(s) 32, 385
PluTI GGCGCC 1 cut(s) 502
PpsI GAGTC 2 cut(s) 32, 385
Psp6I CCWGG 5 cut(s) 138, 480, 501, 823, 1231
PspFI CCCAGC 1 cut(s) 153
PspGI CCWGG 5 cut(s) 138, 480, 501, 823, 1231
PspN4I GGNNCC 6 cut(s) 152, 229, 307, 500, 873, 1058
PspOMI GGGCCC 1 cut(s) 150
PspPI GGNCC 8 cut(s) 150, 151, 305, 474, 512, 630, 746, 1057
PsuI RGATCY 2 cut(s) 237, 871
PvuI CGATCG 1 cut(s) 245
RsaI GTAC 4 cut(s) 59, 203, 433, 1193
RsaNI GTAC 4 cut(s) 58, 202, 432, 1192
SacII CCGCGG 1 cut(s) 213
Sau3AI GATC 6 cut(s) 37, 237, 242, 252, 871, 1031
Sau96I GGNCC 8 cut(s) 150, 151, 305, 474, 512, 630, 746, 1057
SchI GAGTC 2 cut(s) 33, 385
ScrFI CCNGG 8 cut(s) 32, 140, 145, 482, 503, 515, 825, 1233
SduI GDGCHC 3 cut(s) 154, 230, 589
SfaNI GCATC 3 cut(s) 81, 429, 1141
SfiI GGCCNNNNNGGCC 2 cut(s) 140, 149
SfoI GGCGCC 1 cut(s) 500
Sfr303I CCGCGG 1 cut(s) 213
SgrBI CCGCGG 1 cut(s) 213
SinI GGWCC 2 cut(s) 305, 630
SmlI CTYRAG 1 cut(s) 813
SmoI CTYRAG 1 cut(s) 813
Sse9I AATT 3 cut(s) 457, 971, 1219
SspDI GGCGCC 1 cut(s) 498
SspI AATATT 1 cut(s) 855
SspMI CTAG 2 cut(s) 726, 926
StyD4I CCNGG 8 cut(s) 30, 138, 143, 480, 501, 513, 823, 1231
StyI CCWWGG 1 cut(s) 1141
TaaI ACNGT 4 cut(s) 436, 526, 687, 1101
TaqI TCGA 1 cut(s) 882
TaqII GACCGA 1 cut(s) 293
TasI AATT 3 cut(s) 457, 971, 1219
TatI WGTACW 2 cut(s) 201, 1191
TscAI CASTG 6 cut(s) 86, 275, 403, 628, 883, 1106
TseFI GTSAC 1 cut(s) 619
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 6 cut(s) 690, 713, 722, 903, 920, 1028
TspGWI ACGGA 1 cut(s) 329
TspRI CASTG 6 cut(s) 86, 275, 403, 628, 883, 1106
Van91I CCANNNNNTGG 2 cut(s) 274, 773
VpaK11BI GGWCC 2 cut(s) 305, 630
XapI RAATTY 1 cut(s) 457
XceI RCATGY 1 cut(s) 916
XmiI GTMKAC 1 cut(s) 1157
XspI CTAG 2 cut(s) 726, 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.