Rh2AG138100

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000165
Physical Location & Seq
Reverse (-)
12524412 .. 12527080
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG138100.1

Sequence Viewer

Length: 2013 bp
ATGGATAGTGGTTTTCAGAAGAAGATGTTAGAAAATGGTGATGAGGGATATCAGTTTGGAGATTGTGAGGAGCTAAAACTAGGGATGGAGGTGTCTAGTGAAGCTGAAGCTTATGAGCTGTGCAACAACTATGCATATAAGAAAGGGTTTAGTATTCGTAAAGGGCACCTTCGAAAAGATGCGCAGAATAATCCCAGGCAGAGAGAGTTTTTGTGTTCGAAAGAAGGGTTTCTGCGGGATGAGGACTTGTGTGAAGTGAAAAAGGTGAGGAGGTTGGAGACGAGGACGGGGTGCAAGGCTGCATTTCGGTTCAATGTGGAAAATGGTGTGTGGAAGATCTCTTACGCTAATCCGCATCATAATCATGAGTTTGCGAGTCCTGAAGAAAGAAAATTTCTGAGATCGGGTAGAAATATACCGAGTGTTGGTGCAGCTATCGTTGGTTATAGGGTTGATGAGAGTAGCACACCAGTGAAAGCAGACCCAATCTTGGAAAAGGAATGTGGCAGTGCTGACAGTGTTGGGTTCACTCATAAAGATTATCATAGTCTTTTGCAAAGCAAGAAGGGAGAAATGATGGAAGCCAGGGATGTACAAAATTTGGTTAACTATTTTAAGCATAAACAGATTGAGGATCCGAACTTTTTCTATAGTGTTAAAGTCGATCAATTTAGTCGGATAACAGATTTCTTTTGGAGAGATGGTGGATCAAAGTTGGACTATGATTGCTTTGGAGATGTGGTCTGCTTTGACACTACATTTCAGACCAACAAATACAATCTTATTTGTGCTCCATTTGTCGGAGTTAATCATCATTGGAAGAATGTCTTATTTGGTTGTGCTTTTTTATTGGATAAGAGCGTCAACTCATGTATTTGGTTGTTTAAAACATTTCTGGAGTCAATGGGACATAAACAACCTAAAACCATTTTCACAGATGAGGATACAGCAATCGCAAATGCACTTGCAAGTGTGCTTCCAGAGACACACCACCGATTGTGCAGTTGGAACATCTCTAAGAATGCTACGCTACAGCTTGCTAGTCATTATGCTAATCCCGAGTTCAAGAAGCACGTCAACATATGCTTTCATGATTGTTTTACTGAAGATGAGTTTCAAGCTGCATGGGGTAACATGATTAAAGCATTCAGCCTTGAAAGTAACTCGTGGCTGAAGATGATGTATTCACTTAAAGAGAAATGGTGCCCTGCTTTTAGCTTAGATACTTTCTCTGCGAATATTGCATCTGGCCAGAGGGGTGAGAGCATGAACAATATTTTCCATCAAATATCTAGAACAAATGGGGATCTGATCAGTTTTGCACACCATTACGAGGAAAAAACAAAAGAGATGCGATTCAAAGAGTTGGAAGAGGATTTTCGTTGTAGAAATGCCACGCCTCGTCTCACAATAAATAGTGGTGTCTTTAAGCAAGCAGCTACTGAGTATACTGTTAGAATGTATTCATTTCTTGAAAATGAGCTCATGAATATCTTTGGGGTGAGGATGACAGAAGTCGGTACTGATGGGAATGAGTGTATTTATGAAGCTACTGAAGAAGGTTATGGAAGAGTCTATAGAATTCGATTTCGATATGATTGTTTTACTGCTAGGGTTTCCTGTTCTTGTAAGTTATTTGAATCCATGGGAGTGTTGTGTCGTCATGCTCTAAAAGTATTGGATTTGAAAAACTTCACAAGCATACCAGCCCAGTACATAGTGAAGAGATGGACCAAAGGGGCGAAGAAGGGGATTGTGGTGAGTACTGATTTCTCCAAGTCACCATACAAAAAGGCAAAGTCTGCCCAATCGTCGCGCCTAAGTGCATTGATGCACGAAGGAACTAATGTTTTCAGTTTAGGCTCATTGTGTGATTCTGGAACTAGGATTGTCAAACAGAAGTTAGCAGAGACGATGCAGTTACTCGAAGGTGATGCAGAAACTACCAGCATGGTTAGAAATTTGAGAAGAGCAGATGACTCATGTGTCTGTGCTGCGGTTCTGGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

670

Amino Acids

76.62

Weight (kDa)

7.48

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 42 - 124 1.5e-15 FAR1 DNA-binding domain
MULE PF10551 247 - 341 6.8e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1985
Acc16I TGCGCA 1 cut(s) 183
AccB1I GGYRCC 2 cut(s) 165, 1203
AccI GTMKAC 1 cut(s) 1448
AccII CGCG 1 cut(s) 1816
AciI CCGC 3 cut(s) 235, 353, 1997
AclWI GGATC 4 cut(s) 629, 642, 715, 1314
AcoI YGGCCR 1 cut(s) 1249
AcsI RAATTY 4 cut(s) 392, 598, 1581, 1960
AcuI CTGAAG 5 cut(s) 126, 402, 1125, 1193, 1575
AfaI GTAC 4 cut(s) 594, 1522, 1715, 1765
AfiI CCNNNNNNNGG 4 cut(s) 425, 490, 800, 1333
AgsI TTSAA 8 cut(s) 313, 1066, 1118, 1157, 1360, 1475, 1640, 1687
AjiI CACGTC 1 cut(s) 1075
AjnI CCWGG 2 cut(s) 194, 584
AleI CACNNNNGTG 1 cut(s) 470
Alw21I GWGCWC 2 cut(s) 793, 1485
Alw26I GTCTC 4 cut(s) 272, 977, 1409, 1904
AlwI GGATC 4 cut(s) 629, 642, 715, 1314
AlwNI CAGNNNCTG 1 cut(s) 1442
Ama87I CYCGRG 1 cut(s) 1058
AoxI GGCC 1 cut(s) 1249
ApeKI GCWGC 5 cut(s) 299, 431, 1121, 1436, 1994
ApoI RAATTY 4 cut(s) 392, 598, 1581, 1960
Asp700I GAANNNNTTC 4 cut(s) 228, 644, 1462, 1691
AspLEI GCGC 2 cut(s) 184, 1818
AspS9I GGNCC 1 cut(s) 1731
AsuHPI GGTGA 7 cut(s) 50, 277, 1271, 1513, 1771, 1773, 1943
AsuII TTCGAA 2 cut(s) 172, 218
AvaI CYCGRG 1 cut(s) 1058
AvaII GGWCC 1 cut(s) 1731
BaeGI GKGCMC 2 cut(s) 168, 1208
BalI TGGCCA 1 cut(s) 1251
BamHI GGATCC 1 cut(s) 634
BanI GGYRCC 2 cut(s) 165, 1203
BanII GRGCYC 1 cut(s) 1485
BarI GAAGNNNNNNTAC 2 cut(s) 326, 358
BauI CACGAG 1 cut(s) 1165
Bbv12I GWGCWC 2 cut(s) 793, 1485
BbvI GCAGC 5 cut(s) 286, 443, 1108, 1448, 1981
BccI CCATC 6 cut(s) 79, 571, 695, 1290, 1520, 1722
BcgI CGANNNNNNTGC 2 cut(s) 1916, 1950
BciT130I CCWGG 2 cut(s) 196, 586
BciVI GTATCC 1 cut(s) 937
BclI TGATCA 1 cut(s) 1311
BcoDI GTCTC 4 cut(s) 272, 977, 1409, 1904
BfaI CTAG 6 cut(s) 80, 96, 1041, 1293, 1611, 1884
BfmI CTRYAG 3 cut(s) 649, 1031, 1576
BfuI GTATCC 1 cut(s) 937
BglII AGATCT 1 cut(s) 336
BisI GCNGC 5 cut(s) 300, 432, 1122, 1437, 1995
BlsI GCNGC 5 cut(s) 301, 433, 1123, 1438, 1996
BmcAI AGTACT 1 cut(s) 1765
Bme1390I CCNGG 2 cut(s) 196, 586
Bme18I GGWCC 1 cut(s) 1731
BmeT110I CYCGRG 1 cut(s) 1058
BmgBI CACGTC 1 cut(s) 1075
BmgT120I GGNCC 1 cut(s) 1731
BmiI GGNNCC 3 cut(s) 167, 636, 1205
BmrFI CCNGG 2 cut(s) 196, 586
BmrI ACTGGG 1 cut(s) 1705
BmsI GCATC 7 cut(s) 169, 364, 1253, 1341, 1821, 1905, 1924
BmuI ACTGGG 1 cut(s) 1705
BoxI GACNNNNGTC 1 cut(s) 1514
BpmI CTGGAG 1 cut(s) 917
Bpu14I TTCGAA 2 cut(s) 172, 218
BsaJI CCNNGG 3 cut(s) 194, 585, 1644
BsaXI ACNNNNNCTCC 4 cut(s) 688, 718, 726, 756
Bsc4I CCNNNNNNNGG 4 cut(s) 425, 490, 800, 1333
Bse1I ACTGG 2 cut(s) 470, 1711
BseBI CCWGG 2 cut(s) 196, 586
BseDI CCNNGG 3 cut(s) 194, 585, 1644
BseGI GGATG 5 cut(s) 90, 244, 595, 1512, 2011
BseLI CCNNNNNNNGG 4 cut(s) 425, 490, 800, 1333
BseMII CTCAG 2 cut(s) 389, 1434
BseNI ACTGG 2 cut(s) 470, 1711
BseRI GAGGAG 2 cut(s) 83, 283
BseSI GKGCMC 2 cut(s) 168, 1208
BseXI GCAGC 5 cut(s) 286, 443, 1108, 1448, 1981
BsgI GTGCAG 2 cut(s) 450, 1021
Bsh1236I CGCG 1 cut(s) 1816
BshFI GGCC 1 cut(s) 1251
BshNI GGYRCC 2 cut(s) 165, 1203
BsiHKAI GWGCWC 2 cut(s) 793, 1485
BsiHKCI CYCGRG 1 cut(s) 1058
BslFI GGGAC 1 cut(s) 921
BslI CCNNNNNNNGG 4 cut(s) 425, 490, 800, 1333
BsmAI GTCTC 4 cut(s) 272, 977, 1409, 1904
BsmBI CGTCTC 3 cut(s) 272, 1409, 1904
BsmFI GGGAC 1 cut(s) 921
BsmI GAATGC 2 cut(s) 1027, 1145
BsnI GGCC 1 cut(s) 1251
BsoBI CYCGRG 1 cut(s) 1058
Bsp119I TTCGAA 2 cut(s) 172, 218
Bsp1286I GDGCHC 4 cut(s) 168, 793, 1208, 1485
Bsp1407I TGTACA 1 cut(s) 592
Bsp143I GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
Bsp19I CCATGG 1 cut(s) 1644
BspACI CCGC 3 cut(s) 235, 353, 1997
BspANI GGCC 1 cut(s) 1251
BspCNI CTCAG 2 cut(s) 390, 1435
BspFNI CGCG 1 cut(s) 1816
BspHI TCATGA 3 cut(s) 364, 1090, 1485
BspLI GGNNCC 3 cut(s) 167, 636, 1205
BspPI GGATC 4 cut(s) 629, 642, 715, 1314
BspQI GCTCTTC 1 cut(s) 1963
BspT104I TTCGAA 2 cut(s) 172, 218
BspT107I GGYRCC 2 cut(s) 165, 1203
BsrGI TGTACA 1 cut(s) 592
BsrI ACTGG 2 cut(s) 470, 1711
BssECI CCNNGG 3 cut(s) 194, 585, 1644
BssMI GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
BssNAI GTATAC 1 cut(s) 1449
BssSI CACGAG 1 cut(s) 1165
BssT1I CCWWGG 1 cut(s) 1644
Bst1107I GTATAC 1 cut(s) 1449
Bst2BI CACGAG 1 cut(s) 1165
Bst2UI CCWGG 2 cut(s) 196, 586
Bst4CI ACNGT 2 cut(s) 518, 1453
Bst6I CTCTTC 4 cut(s) 1365, 1564, 1718, 1963
BstAPI GCANNNNNTGC 1 cut(s) 1802
BstAUI TGTACA 1 cut(s) 592
BstBI TTCGAA 2 cut(s) 172, 218
BstC8I GCNNGC 2 cut(s) 1038, 1434
BstDEI CTNAG 5 cut(s) 398, 1017, 1219, 1443, 1820
BstDSI CCRYGG 1 cut(s) 1644
BstF5I GGATG 5 cut(s) 90, 244, 595, 1512, 2011
BstFNI CGCG 1 cut(s) 1816
BstHHI GCGC 2 cut(s) 184, 1818
BstKTI GATC 7 cut(s) 339, 404, 637, 667, 710, 1309, 1314
BstMAI GTCTC 4 cut(s) 272, 977, 1409, 1904
BstMBI GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
BstMWI GCNNNNNNNGC 2 cut(s) 1241, 1802
BstNI CCWGG 2 cut(s) 196, 586
BstPAI GACNNNNGTC 1 cut(s) 1514
BstSCI CCNGG 2 cut(s) 194, 584
BstSFI CTRYAG 3 cut(s) 649, 1031, 1576
BstSLI GKGCMC 2 cut(s) 168, 1208
BstUI CGCG 1 cut(s) 1816
BstV1I GCAGC 5 cut(s) 286, 443, 1108, 1448, 1981
BstX2I RGATCY 3 cut(s) 336, 634, 1306
BstYI RGATCY 3 cut(s) 336, 634, 1306
BstZ17I GTATAC 1 cut(s) 1449
BsuI GTATCC 1 cut(s) 937
BsuRI GGCC 1 cut(s) 1251
BtgI CCRYGG 1 cut(s) 1644
BtrI CACGTC 1 cut(s) 1075
BtsCI GGATG 5 cut(s) 90, 244, 595, 1512, 2011
BtsI GCAGTG 1 cut(s) 514
BtsIMutI CAGTG 3 cut(s) 477, 514, 523
Cac8I GCNNGC 2 cut(s) 1038, 1434
CaiI CAGNNNCTG 1 cut(s) 1442
CciI TCATGA 3 cut(s) 364, 1090, 1485
CfoI GCGC 2 cut(s) 184, 1818
Cfr13I GGNCC 1 cut(s) 1731
CseI GACGC 1 cut(s) 850
Csp6I GTAC 4 cut(s) 593, 1521, 1714, 1764
CviQI GTAC 4 cut(s) 593, 1521, 1714, 1764
DdeI CTNAG 5 cut(s) 398, 1017, 1219, 1443, 1820
DpnI GATC 7 cut(s) 338, 403, 636, 666, 709, 1308, 1313
DpnII GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
DraI TTTAAA 1 cut(s) 886
DrdI GACNNNNNNGTC 1 cut(s) 1985
DseDI GACNNNNNNGTC 1 cut(s) 1985
EaeI YGGCCR 1 cut(s) 1249
Eam1104I CTCTTC 4 cut(s) 1365, 1564, 1718, 1963
EarI CTCTTC 4 cut(s) 1365, 1564, 1718, 1963
Ecl136II GAGCTC 1 cut(s) 1483
Eco130I CCWWGG 1 cut(s) 1644
Eco24I GRGCYC 1 cut(s) 1485
Eco32I GATATC 1 cut(s) 50
Eco47I GGWCC 1 cut(s) 1731
Eco53kI GAGCTC 1 cut(s) 1483
Eco57I CTGAAG 5 cut(s) 126, 402, 1125, 1193, 1575
Eco88I CYCGRG 1 cut(s) 1058
EcoICRI GAGCTC 1 cut(s) 1483
EcoRI GAATTC 1 cut(s) 1581
EcoRII CCWGG 2 cut(s) 194, 584
EcoRV GATATC 1 cut(s) 50
EcoT14I CCWWGG 1 cut(s) 1644
EcoT22I ATGCAT 1 cut(s) 136
EcoT38I GRGCYC 1 cut(s) 1485
ErhI CCWWGG 1 cut(s) 1644
Esp3I CGTCTC 3 cut(s) 272, 1409, 1904
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 812, 844
FaqI GGGAC 1 cut(s) 921
FauI CCCGC 1 cut(s) 228
FauNDI CATATG 1 cut(s) 1082
FbaI TGATCA 1 cut(s) 1311
FblI GTMKAC 1 cut(s) 1448
Fnu4HI GCNGC 5 cut(s) 300, 432, 1122, 1437, 1995
FokI GGATG 4 cut(s) 97, 251, 602, 1519
FriOI GRGCYC 1 cut(s) 1485
Fsp4HI GCNGC 5 cut(s) 300, 432, 1122, 1437, 1995
FspBI CTAG 6 cut(s) 80, 96, 1041, 1293, 1611, 1884
FspI TGCGCA 1 cut(s) 183
GlaI GCGC 2 cut(s) 183, 1817
GluI GCNGC 5 cut(s) 300, 432, 1122, 1437, 1995
GsuI CTGGAG 1 cut(s) 917
HaeIII GGCC 1 cut(s) 1251
HgaI GACGC 1 cut(s) 850
HhaI GCGC 2 cut(s) 184, 1818
Hin6I GCGC 2 cut(s) 182, 1816
HinP1I GCGC 2 cut(s) 182, 1816
HincII GTYRAC 3 cut(s) 607, 865, 1078
HindII GTYRAC 3 cut(s) 607, 865, 1078
HindIII AAGCTT 1 cut(s) 108
HinfI GANTC 7 cut(s) 376, 899, 1356, 1572, 1640, 1874, 1979
HpaI GTTAAC 1 cut(s) 607
HphI GGTGA 7 cut(s) 50, 277, 1271, 1513, 1771, 1773, 1943
Hpy166II GTNNAC 5 cut(s) 528, 607, 865, 1078, 1449
Hpy188I TCNGA 7 cut(s) 18, 399, 639, 678, 765, 803, 1311
Hpy8I GTNNAC 5 cut(s) 528, 607, 865, 1078, 1449
Hpy99I CGWCG 1 cut(s) 1816
HpyAV CCTTC 7 cut(s) 179, 218, 559, 1553, 1741, 1832, 1922
HpyCH4III ACNGT 2 cut(s) 518, 1453
HpyCH4IV ACGT 1 cut(s) 1074
HpyF10VI GCNNNNNNNGC 2 cut(s) 1241, 1802
HpyF3I CTNAG 5 cut(s) 398, 1017, 1219, 1443, 1820
HpySE526I ACGT 1 cut(s) 1074
HspAI GCGC 2 cut(s) 182, 1816
Ksp22I TGATCA 1 cut(s) 1311
KspAI GTTAAC 1 cut(s) 607
Kzo9I GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
LguI GCTCTTC 1 cut(s) 1963
LmnI GCTCC 2 cut(s) 70, 796
Lsp1109I GCAGC 5 cut(s) 286, 443, 1108, 1448, 1981
LweI GCATC 7 cut(s) 169, 364, 1253, 1341, 1821, 1905, 1924
MaeI CTAG 6 cut(s) 80, 96, 1041, 1293, 1611, 1884
MaeII ACGT 1 cut(s) 1074
MaeIII GTNAC 4 cut(s) 1130, 1160, 1779, 1920
MalI GATC 7 cut(s) 338, 403, 636, 666, 709, 1308, 1313
MboI GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
MflI RGATCY 3 cut(s) 336, 634, 1306
MhlI GDGCHC 4 cut(s) 168, 793, 1208, 1485
MlsI TGGCCA 1 cut(s) 1251
MluCI AATT 5 cut(s) 392, 598, 668, 1581, 1960
MluNI TGGCCA 1 cut(s) 1251
MlyI GAGTC 4 cut(s) 385, 908, 1581, 1973
MmeI TCCRAC 6 cut(s) 255, 656, 696, 781, 986, 1347
Mox20I TGGCCA 1 cut(s) 1251
Mph1103I ATGCAT 1 cut(s) 136
MroXI GAANNNNTTC 4 cut(s) 228, 644, 1462, 1691
MscI TGGCCA 1 cut(s) 1251
MseI TTAA 8 cut(s) 606, 615, 657, 807, 885, 1140, 1191, 1428
MslI CAYNNNNRTG 3 cut(s) 363, 470, 1649
Msp20I TGGCCA 1 cut(s) 1251
MspR9I CCNGG 2 cut(s) 196, 586
Mva1269I GAATGC 2 cut(s) 1027, 1145
MvaI CCWGG 2 cut(s) 196, 586
MvnI CGCG 1 cut(s) 1816
MwoI GCNNNNNNNGC 2 cut(s) 1241, 1802
NcoI CCATGG 1 cut(s) 1644
NdeI CATATG 1 cut(s) 1082
NdeII GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
NlaIV GGNNCC 3 cut(s) 167, 636, 1205
NmuCI GTSAC 1 cut(s) 1779
NsbI TGCGCA 1 cut(s) 183
NsiI ATGCAT 1 cut(s) 136
NspV TTCGAA 2 cut(s) 172, 218
OliI CACNNNNGTG 1 cut(s) 470
PagI TCATGA 3 cut(s) 364, 1090, 1485
PciSI GCTCTTC 1 cut(s) 1963
PctI GAATGC 2 cut(s) 1027, 1145
PdmI GAANNNNTTC 4 cut(s) 228, 644, 1462, 1691
PfeI GAWTC 3 cut(s) 1356, 1640, 1874
PkrI GCNGC 5 cut(s) 301, 433, 1123, 1438, 1996
PleI GAGTC 4 cut(s) 384, 907, 1580, 1973
PpsI GAGTC 4 cut(s) 384, 907, 1580, 1973
PshAI GACNNNNGTC 1 cut(s) 1514
Psp124BI GAGCTC 1 cut(s) 1485
Psp6I CCWGG 2 cut(s) 194, 584
PspGI CCWGG 2 cut(s) 194, 584
PspN4I GGNNCC 3 cut(s) 167, 636, 1205
PspPI GGNCC 1 cut(s) 1731
PstNI CAGNNNCTG 1 cut(s) 1442
PsuI RGATCY 3 cut(s) 336, 634, 1306
RsaI GTAC 4 cut(s) 594, 1522, 1715, 1765
RsaNI GTAC 4 cut(s) 593, 1521, 1714, 1764
RseI CAYNNNNRTG 3 cut(s) 363, 470, 1649
SacI GAGCTC 1 cut(s) 1485
SapI GCTCTTC 1 cut(s) 1963
SaqAI TTAA 8 cut(s) 606, 615, 657, 807, 885, 1140, 1191, 1428
SatI GCNGC 5 cut(s) 300, 432, 1122, 1437, 1995
Sau3AI GATC 7 cut(s) 336, 401, 634, 664, 707, 1306, 1311
Sau96I GGNCC 1 cut(s) 1731
ScaI AGTACT 1 cut(s) 1765
SchI GAGTC 4 cut(s) 385, 908, 1581, 1973
ScrFI CCNGG 2 cut(s) 196, 586
SduI GDGCHC 4 cut(s) 168, 793, 1208, 1485
SfaNI GCATC 7 cut(s) 169, 364, 1253, 1341, 1821, 1905, 1924
SfcI CTRYAG 3 cut(s) 649, 1031, 1576
SfuI TTCGAA 2 cut(s) 172, 218
SinI GGWCC 1 cut(s) 1731
SmiMI CAYNNNNRTG 3 cut(s) 363, 470, 1649
Sse9I AATT 5 cut(s) 392, 598, 668, 1581, 1960
SsiI CCGC 3 cut(s) 235, 353, 1997
SspI AATATT 2 cut(s) 1240, 1276
SspMI CTAG 6 cut(s) 80, 96, 1041, 1293, 1611, 1884
SstI GAGCTC 1 cut(s) 1485
StyD4I CCNGG 2 cut(s) 194, 584
StyI CCWWGG 1 cut(s) 1644
TaaI ACNGT 2 cut(s) 518, 1453
TaiI ACGT 1 cut(s) 1077
TaqI TCGA 6 cut(s) 172, 218, 663, 1585, 1591, 1926
TasI AATT 5 cut(s) 392, 598, 668, 1581, 1960
TatI WGTACW 3 cut(s) 592, 1713, 1763
TfiI GAWTC 3 cut(s) 1356, 1640, 1874
Tru1I TTAA 8 cut(s) 606, 615, 657, 807, 885, 1140, 1191, 1428
Tru9I TTAA 8 cut(s) 606, 615, 657, 807, 885, 1140, 1191, 1428
TscAI CASTG 3 cut(s) 477, 514, 523
TseFI GTSAC 1 cut(s) 1779
TseI GCWGC 5 cut(s) 299, 431, 1121, 1436, 1994
Tsp45I GTSAC 1 cut(s) 1779
TspDTI ATGAA 5 cut(s) 1079, 1283, 1455, 1502, 1560
TspRI CASTG 3 cut(s) 477, 514, 523
VpaK11BI GGWCC 1 cut(s) 1731
XapI RAATTY 4 cut(s) 392, 598, 1581, 1960
XbaI TCTAGA 1 cut(s) 1292
XmiI GTMKAC 1 cut(s) 1448
XmnI GAANNNNTTC 4 cut(s) 228, 644, 1462, 1691
XspI CTAG 6 cut(s) 80, 96, 1041, 1293, 1611, 1884
ZrmI AGTACT 1 cut(s) 1765
Zsp2I ATGCAT 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.