Rroxscaffold_2G00142210

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000165
Physical Location & Seq
Forward (+)
80341637 .. 80344277
2641 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00142210.1

Sequence Viewer

Length: 2016 bp
ATGGATAGTGGTTTTCAGAAGAAGATGTTAGAAATTGGTGATGAGGGATATCAGTTTGGAGATTGTGAGGAGCTAAAACTAGGGATGGAGGTGTCTAGTGAAGCTGAAGCTTATGAGCTGTGCAACAACTATGCATATAAGAAAGGGTTTAGTATTCGTAAAGGGCACCTTCGAAAAGATGCGCAGAATAATCCCAGGCAGAGAGAGTTTTTGTGTTCGAAAGAAGGGTTTCTGCGAGATGAGGACTTGTGTGAAGTGAAAAAGGTGAGGAGGTTGGAGATGAGGACGGGGTGCAAGGCTGCATTTCGGTTCAATGTGGAAAATGGTGTGTGGAAGATCTCTTACGCTAATCCGCATCATAATCATGAGTTTGCGAGTCCTGAAGAAAGAAAATTTCTGAGATCAGGTAGAAATATACCGAGTGTTCGTGCAGCTATCGTTGGTTATAAGGTTGTTGATGAGAGTAGCACACCAGTGAAAGCATACCCAATCTTGGAAAAGGAATGTGGCAGTGCTGACAGTGTTGGGTTCACTCATAAAGATTATCATAGTCTTTTGCAAAGCAAGAAGGGAGAAATGATGGAAGCCAGGGATGTACAAAATTTGGTTAACTATTTTAAGCATAAACAGATTGAGGATCCGAACTTTTTCTTTAGTGTTAAAGTCGATCAATTTAGTCGGATAACAAATTTCTTTTGGAGAGATGGTGGATCAAAGTTGGACTATGATTGCTTTGGAGATGTGGTCTGCTTTGACACTACATTTCAGACCAACAAATACAATCTTATTTGTGCTCCATTTGTCGGAGTTAATCATCATTGGAAGAACGTCTTATTTGGTTGTGCTTTTTTATTGGATAAGAGCGTCGACTCATGTATTTGGTTGTTTAAAACATTTCTGGAGTCAATGGGACATAAACAACCTAAAACCGTTTTCACAGATGAGGATACAGCAATCGCAAATGCACTTGCAAGTGTGCTTCCAGAGACACGCCACCGATTGTGCAGTTGGAACATCTCTAAAAATGCTACGCTACAGCTTGCTAGTCATTATGCTAATCCCGAGTTCAAGAAGCACATCAACATATGCTTTCATGATTGTTTTACTGAAGATGAGTTTCAAGCTGCATGGGGTAACATGATTAAAGCATTCAGCCTCGAAAGTAACTCGTGGCTGAAGAAGATGTATTCACTTAAAGGGAAATGGTGCCCTGCTTTTAGCTTAGATACTTTCTCTGCGAATATTGCATCCAGCCAGAGGGGTGAGAGCATGAACAATATTTTCCATCAAATGTCTAGAACAAATGGGGATCTGATCAGTTTTGCACACCATTACGAGGAAAAAACAAAAGAGATGCGATTCAAAGAGTTGGAAGAGGATTTTCATTGTAGAAATGCCACGCCTCGTCTCACAATAAATAGTGGTGTCTTTAAGCAAGCAGCTACTGAGTATACTGTTAGAATGTATTCATTTCTTGAAAATGAGCTCATGAGTATCTTTGGGGTGAGGATGACAGAAGTCGGTACTGATGGGAATGAGTGTATTTATGACGCTACTGAAGAAGGTTATGAAAGAGTCTATAGAATTCGATTTCGATATGATTGTTTTACTGCTAGGGTTTCCTGTTCTTGTAAGTTATTTGAATCCATGGGAGTGTTGTGTCGTCATGCTCTAAAAGTATTGGATTTGAAAAACTTCACAAGCATACCAGCCCAGTACATAGTGAAGAGATGGACCAAAGGGGCGAAGAAGGGGATTGTGGTGAGTACTGATTTCTCCAAGTCACCATACAAAAAGGCAAAGTCTGCCCAATCGTCGCGACTAAGTGCATTGATGCACGAAGGCACTAATGTTTTCAGTTTAGGCTCATTGTGTGATTCTGGAACTAGGATTGTCAAACAGAAGTTAGCAGAGACGATGCAGTTACTCGAAAGTGATGCAGAAACTACCAACATGGTTAGAAATTTGAGAAAAGCAGATGACTCATCTGTCTGTGCTGCGGTTCTGGATGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

671

Amino Acids

76.82

Weight (kDa)

8.18

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 42 - 124 4.2e-15 FAR1 DNA-binding domain
MULE PF10551 248 - 342 2.9e-24 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 447
AasI GACNNNNNNGTC 1 cut(s) 1988
Acc16I TGCGCA 1 cut(s) 183
AccB1I GGYRCC 2 cut(s) 165, 1206
AccI GTMKAC 2 cut(s) 867, 1451
AccII CGCG 1 cut(s) 1819
AciI CCGC 2 cut(s) 353, 2000
AclWI GGATC 4 cut(s) 632, 645, 718, 1317
AcsI RAATTY 5 cut(s) 392, 601, 688, 1584, 1963
AcuI CTGAAG 5 cut(s) 126, 402, 1128, 1196, 1578
AfaI GTAC 4 cut(s) 597, 1525, 1718, 1768
AfiI CCNNNNNNNGG 4 cut(s) 493, 803, 1257, 1336
AgsI TTSAA 7 cut(s) 313, 1069, 1121, 1363, 1478, 1643, 1690
AjnI CCWGG 2 cut(s) 194, 587
AleI CACNNNNGTG 1 cut(s) 473
Alw21I GWGCWC 2 cut(s) 796, 1488
Alw26I GTCTC 3 cut(s) 980, 1412, 1907
AlwI GGATC 4 cut(s) 632, 645, 718, 1317
AlwNI CAGNNNCTG 1 cut(s) 1445
Ama87I CYCGRG 1 cut(s) 1061
ApeKI GCWGC 5 cut(s) 299, 431, 1124, 1439, 1997
ApoI RAATTY 5 cut(s) 392, 601, 688, 1584, 1963
Asp700I GAANNNNTTC 4 cut(s) 228, 647, 1465, 1694
AspLEI GCGC 1 cut(s) 184
AspS9I GGNCC 1 cut(s) 1734
AsuHPI GGTGA 6 cut(s) 50, 277, 1274, 1516, 1774, 1776
AsuII TTCGAA 2 cut(s) 172, 218
AvaI CYCGRG 1 cut(s) 1061
AvaII GGWCC 1 cut(s) 1734
BaeGI GKGCMC 2 cut(s) 168, 1211
BamHI GGATCC 1 cut(s) 637
BanI GGYRCC 2 cut(s) 165, 1206
BanII GRGCYC 1 cut(s) 1488
BarI GAAGNNNNNNTAC 2 cut(s) 326, 358
BauI CACGAG 1 cut(s) 1168
Bbv12I GWGCWC 2 cut(s) 796, 1488
BbvI GCAGC 5 cut(s) 286, 443, 1111, 1451, 1984
BccI CCATC 6 cut(s) 79, 574, 698, 1293, 1523, 1725
BcgI CGANNNNNNTGC 2 cut(s) 1919, 1953
BciT130I CCWGG 2 cut(s) 196, 589
BciVI GTATCC 1 cut(s) 940
BclI TGATCA 1 cut(s) 1314
BcoDI GTCTC 3 cut(s) 980, 1412, 1907
BfaI CTAG 6 cut(s) 80, 96, 1044, 1296, 1614, 1887
BfmI CTRYAG 2 cut(s) 1034, 1579
BfuI GTATCC 1 cut(s) 940
BglII AGATCT 1 cut(s) 336
BisI GCNGC 5 cut(s) 300, 432, 1125, 1440, 1998
BlsI GCNGC 5 cut(s) 301, 433, 1126, 1441, 1999
BmcAI AGTACT 1 cut(s) 1768
Bme1390I CCNGG 2 cut(s) 196, 589
Bme18I GGWCC 1 cut(s) 1734
BmeT110I CYCGRG 1 cut(s) 1061
BmgT120I GGNCC 1 cut(s) 1734
BmiI GGNNCC 3 cut(s) 167, 639, 1208
BmrFI CCNGG 2 cut(s) 196, 589
BmrI ACTGGG 1 cut(s) 1708
BmsI GCATC 8 cut(s) 169, 364, 1256, 1344, 1824, 1908, 1927, 1999
BmuI ACTGGG 1 cut(s) 1708
BoxI GACNNNNGTC 1 cut(s) 1517
BpmI CTGGAG 1 cut(s) 920
Bpu14I TTCGAA 2 cut(s) 172, 218
BsaJI CCNNGG 3 cut(s) 194, 588, 1647
BsaXI ACNNNNNCTCC 4 cut(s) 691, 721, 729, 759
Bsc4I CCNNNNNNNGG 4 cut(s) 493, 803, 1257, 1336
Bse1I ACTGG 2 cut(s) 473, 1714
BseBI CCWGG 2 cut(s) 196, 589
BseDI CCNNGG 3 cut(s) 194, 588, 1647
BseGI GGATG 5 cut(s) 90, 598, 1247, 1515, 2014
BseLI CCNNNNNNNGG 4 cut(s) 493, 803, 1257, 1336
BseMII CTCAG 2 cut(s) 389, 1437
BseNI ACTGG 2 cut(s) 473, 1714
BseRI GAGGAG 2 cut(s) 83, 283
BseSI GKGCMC 2 cut(s) 168, 1211
BseXI GCAGC 5 cut(s) 286, 443, 1111, 1451, 1984
BsgI GTGCAG 2 cut(s) 450, 1024
Bsh1236I CGCG 1 cut(s) 1819
BshNI GGYRCC 2 cut(s) 165, 1206
BsiHKAI GWGCWC 2 cut(s) 796, 1488
BsiHKCI CYCGRG 1 cut(s) 1061
BslFI GGGAC 1 cut(s) 924
BslI CCNNNNNNNGG 4 cut(s) 493, 803, 1257, 1336
BsmAI GTCTC 3 cut(s) 980, 1412, 1907
BsmBI CGTCTC 2 cut(s) 1412, 1907
BsmFI GGGAC 1 cut(s) 924
BsmI GAATGC 1 cut(s) 1148
BsoBI CYCGRG 1 cut(s) 1061
Bsp119I TTCGAA 2 cut(s) 172, 218
Bsp1286I GDGCHC 4 cut(s) 168, 796, 1211, 1488
Bsp1407I TGTACA 1 cut(s) 595
Bsp143I GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
Bsp19I CCATGG 1 cut(s) 1647
Bsp68I TCGCGA 1 cut(s) 1819
BspACI CCGC 2 cut(s) 353, 2000
BspCNI CTCAG 2 cut(s) 390, 1438
BspFNI CGCG 1 cut(s) 1819
BspHI TCATGA 3 cut(s) 364, 1093, 1488
BspLI GGNNCC 3 cut(s) 167, 639, 1208
BspPI GGATC 4 cut(s) 632, 645, 718, 1317
BspT104I TTCGAA 2 cut(s) 172, 218
BspT107I GGYRCC 2 cut(s) 165, 1206
BsrGI TGTACA 1 cut(s) 595
BsrI ACTGG 2 cut(s) 473, 1714
BssECI CCNNGG 3 cut(s) 194, 588, 1647
BssMI GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
BssNAI GTATAC 1 cut(s) 1452
BssSI CACGAG 1 cut(s) 1168
BssT1I CCWWGG 1 cut(s) 1647
Bst1107I GTATAC 1 cut(s) 1452
Bst2BI CACGAG 1 cut(s) 1168
Bst2UI CCWGG 2 cut(s) 196, 589
Bst4CI ACNGT 3 cut(s) 521, 931, 1456
Bst6I CTCTTC 2 cut(s) 1368, 1721
BstAPI GCANNNNNTGC 1 cut(s) 1805
BstAUI TGTACA 1 cut(s) 595
BstBI TTCGAA 2 cut(s) 172, 218
BstC8I GCNNGC 2 cut(s) 1041, 1437
BstDEI CTNAG 4 cut(s) 398, 1222, 1446, 1823
BstDSI CCRYGG 1 cut(s) 1647
BstF5I GGATG 5 cut(s) 90, 598, 1247, 1515, 2014
BstFNI CGCG 1 cut(s) 1819
BstHHI GCGC 1 cut(s) 184
BstKTI GATC 7 cut(s) 339, 404, 640, 670, 713, 1312, 1317
BstMAI GTCTC 3 cut(s) 980, 1412, 1907
BstMBI GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
BstMWI GCNNNNNNNGC 2 cut(s) 1244, 1805
BstNI CCWGG 2 cut(s) 196, 589
BstPAI GACNNNNGTC 1 cut(s) 1517
BstSCI CCNGG 2 cut(s) 194, 587
BstSFI CTRYAG 2 cut(s) 1034, 1579
BstSLI GKGCMC 2 cut(s) 168, 1211
BstUI CGCG 1 cut(s) 1819
BstV1I GCAGC 5 cut(s) 286, 443, 1111, 1451, 1984
BstX2I RGATCY 3 cut(s) 336, 637, 1309
BstYI RGATCY 3 cut(s) 336, 637, 1309
BstZ17I GTATAC 1 cut(s) 1452
BsuI GTATCC 1 cut(s) 940
BtgI CCRYGG 1 cut(s) 1647
BtsCI GGATG 5 cut(s) 90, 598, 1247, 1515, 2014
BtsI GCAGTG 1 cut(s) 517
BtsIMutI CAGTG 3 cut(s) 480, 517, 526
BtuMI TCGCGA 1 cut(s) 1819
Cac8I GCNNGC 2 cut(s) 1041, 1437
CaiI CAGNNNCTG 1 cut(s) 1445
CciI TCATGA 3 cut(s) 364, 1093, 1488
CfoI GCGC 1 cut(s) 184
Cfr13I GGNCC 1 cut(s) 1734
CseI GACGC 2 cut(s) 853, 1559
Csp6I GTAC 4 cut(s) 596, 1524, 1717, 1767
CviQI GTAC 4 cut(s) 596, 1524, 1717, 1767
DdeI CTNAG 4 cut(s) 398, 1222, 1446, 1823
DpnI GATC 7 cut(s) 338, 403, 639, 669, 712, 1311, 1316
DpnII GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
DraI TTTAAA 1 cut(s) 889
DrdI GACNNNNNNGTC 1 cut(s) 1988
DseDI GACNNNNNNGTC 1 cut(s) 1988
Eam1104I CTCTTC 2 cut(s) 1368, 1721
EarI CTCTTC 2 cut(s) 1368, 1721
Ecl136II GAGCTC 1 cut(s) 1486
Eco130I CCWWGG 1 cut(s) 1647
Eco24I GRGCYC 1 cut(s) 1488
Eco32I GATATC 1 cut(s) 50
Eco47I GGWCC 1 cut(s) 1734
Eco53kI GAGCTC 1 cut(s) 1486
Eco57I CTGAAG 5 cut(s) 126, 402, 1128, 1196, 1578
Eco88I CYCGRG 1 cut(s) 1061
EcoICRI GAGCTC 1 cut(s) 1486
EcoRI GAATTC 1 cut(s) 1584
EcoRII CCWGG 2 cut(s) 194, 587
EcoRV GATATC 1 cut(s) 50
EcoT14I CCWWGG 1 cut(s) 1647
EcoT22I ATGCAT 1 cut(s) 136
EcoT38I GRGCYC 1 cut(s) 1488
ErhI CCWWGG 1 cut(s) 1647
Esp3I CGTCTC 2 cut(s) 1412, 1907
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 815, 847
FaqI GGGAC 1 cut(s) 924
FauNDI CATATG 1 cut(s) 1085
FbaI TGATCA 1 cut(s) 1314
FblI GTMKAC 2 cut(s) 867, 1451
Fnu4HI GCNGC 5 cut(s) 300, 432, 1125, 1440, 1998
FokI GGATG 4 cut(s) 97, 605, 1234, 1522
FriOI GRGCYC 1 cut(s) 1488
Fsp4HI GCNGC 5 cut(s) 300, 432, 1125, 1440, 1998
FspBI CTAG 6 cut(s) 80, 96, 1044, 1296, 1614, 1887
FspI TGCGCA 1 cut(s) 183
GlaI GCGC 1 cut(s) 183
GluI GCNGC 5 cut(s) 300, 432, 1125, 1440, 1998
GsuI CTGGAG 1 cut(s) 920
HgaI GACGC 2 cut(s) 853, 1559
HhaI GCGC 1 cut(s) 184
Hin6I GCGC 1 cut(s) 182
HinP1I GCGC 1 cut(s) 182
HincII GTYRAC 2 cut(s) 610, 868
HindII GTYRAC 2 cut(s) 610, 868
HindIII AAGCTT 1 cut(s) 108
HinfI GANTC 8 cut(s) 376, 869, 902, 1359, 1575, 1643, 1877, 1982
HpaI GTTAAC 1 cut(s) 610
HphI GGTGA 6 cut(s) 50, 277, 1274, 1516, 1774, 1776
Hpy166II GTNNAC 4 cut(s) 531, 610, 868, 1452
Hpy188I TCNGA 7 cut(s) 18, 399, 642, 681, 768, 806, 1314
Hpy8I GTNNAC 4 cut(s) 531, 610, 868, 1452
Hpy99I CGWCG 2 cut(s) 869, 1819
HpyAV CCTTC 6 cut(s) 179, 218, 562, 1556, 1744, 1835
HpyCH4III ACNGT 3 cut(s) 521, 931, 1456
HpyCH4IV ACGT 1 cut(s) 828
HpyF10VI GCNNNNNNNGC 2 cut(s) 1244, 1805
HpyF3I CTNAG 4 cut(s) 398, 1222, 1446, 1823
HpySE526I ACGT 1 cut(s) 828
HspAI GCGC 1 cut(s) 182
Ksp22I TGATCA 1 cut(s) 1314
KspAI GTTAAC 1 cut(s) 610
Kzo9I GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
LmnI GCTCC 2 cut(s) 70, 799
Lsp1109I GCAGC 5 cut(s) 286, 443, 1111, 1451, 1984
LweI GCATC 8 cut(s) 169, 364, 1256, 1344, 1824, 1908, 1927, 1999
MaeI CTAG 6 cut(s) 80, 96, 1044, 1296, 1614, 1887
MaeII ACGT 1 cut(s) 828
MaeIII GTNAC 4 cut(s) 1133, 1163, 1782, 1923
MalI GATC 7 cut(s) 338, 403, 639, 669, 712, 1311, 1316
MboI GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
MflI RGATCY 3 cut(s) 336, 637, 1309
MhlI GDGCHC 4 cut(s) 168, 796, 1211, 1488
MluCI AATT 7 cut(s) 33, 392, 601, 671, 688, 1584, 1963
MlyI GAGTC 5 cut(s) 385, 863, 911, 1584, 1976
MmeI TCCRAC 6 cut(s) 255, 659, 699, 784, 989, 1350
Mph1103I ATGCAT 1 cut(s) 136
MroXI GAANNNNTTC 4 cut(s) 228, 647, 1465, 1694
MseI TTAA 8 cut(s) 609, 618, 660, 810, 888, 1143, 1194, 1431
MslI CAYNNNNRTG 3 cut(s) 363, 473, 1652
MspR9I CCNGG 2 cut(s) 196, 589
Mva1269I GAATGC 1 cut(s) 1148
MvaI CCWGG 2 cut(s) 196, 589
MvnI CGCG 1 cut(s) 1819
MwoI GCNNNNNNNGC 2 cut(s) 1244, 1805
NcoI CCATGG 1 cut(s) 1647
NdeI CATATG 1 cut(s) 1085
NdeII GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
NlaIV GGNNCC 3 cut(s) 167, 639, 1208
NmuCI GTSAC 1 cut(s) 1782
NruI TCGCGA 1 cut(s) 1819
NsbI TGCGCA 1 cut(s) 183
NsiI ATGCAT 1 cut(s) 136
NspV TTCGAA 2 cut(s) 172, 218
OliI CACNNNNGTG 1 cut(s) 473
PagI TCATGA 3 cut(s) 364, 1093, 1488
PctI GAATGC 1 cut(s) 1148
PdmI GAANNNNTTC 4 cut(s) 228, 647, 1465, 1694
PfeI GAWTC 3 cut(s) 1359, 1643, 1877
PkrI GCNGC 5 cut(s) 301, 433, 1126, 1441, 1999
PleI GAGTC 5 cut(s) 384, 863, 910, 1583, 1976
PpsI GAGTC 5 cut(s) 384, 863, 910, 1583, 1976
PshAI GACNNNNGTC 1 cut(s) 1517
PsiI TTATAA 1 cut(s) 447
Psp124BI GAGCTC 1 cut(s) 1488
Psp6I CCWGG 2 cut(s) 194, 587
PspGI CCWGG 2 cut(s) 194, 587
PspN4I GGNNCC 3 cut(s) 167, 639, 1208
PspPI GGNCC 1 cut(s) 1734
PstNI CAGNNNCTG 1 cut(s) 1445
PsuI RGATCY 3 cut(s) 336, 637, 1309
RruI TCGCGA 1 cut(s) 1819
RsaI GTAC 4 cut(s) 597, 1525, 1718, 1768
RsaNI GTAC 4 cut(s) 596, 1524, 1717, 1767
RseI CAYNNNNRTG 3 cut(s) 363, 473, 1652
SacI GAGCTC 1 cut(s) 1488
SalI GTCGAC 1 cut(s) 866
SaqAI TTAA 8 cut(s) 609, 618, 660, 810, 888, 1143, 1194, 1431
SatI GCNGC 5 cut(s) 300, 432, 1125, 1440, 1998
Sau3AI GATC 7 cut(s) 336, 401, 637, 667, 710, 1309, 1314
Sau96I GGNCC 1 cut(s) 1734
ScaI AGTACT 1 cut(s) 1768
SchI GAGTC 5 cut(s) 385, 863, 911, 1584, 1976
ScrFI CCNGG 2 cut(s) 196, 589
SduI GDGCHC 4 cut(s) 168, 796, 1211, 1488
SfaNI GCATC 8 cut(s) 169, 364, 1256, 1344, 1824, 1908, 1927, 1999
SfcI CTRYAG 2 cut(s) 1034, 1579
SfuI TTCGAA 2 cut(s) 172, 218
SinI GGWCC 1 cut(s) 1734
SmiMI CAYNNNNRTG 3 cut(s) 363, 473, 1652
Sse9I AATT 7 cut(s) 33, 392, 601, 671, 688, 1584, 1963
SsiI CCGC 2 cut(s) 353, 2000
SspI AATATT 2 cut(s) 1243, 1279
SspMI CTAG 6 cut(s) 80, 96, 1044, 1296, 1614, 1887
SstI GAGCTC 1 cut(s) 1488
StyD4I CCNGG 2 cut(s) 194, 587
StyI CCWWGG 1 cut(s) 1647
TaaI ACNGT 3 cut(s) 521, 931, 1456
TaiI ACGT 1 cut(s) 831
TaqI TCGA 8 cut(s) 172, 218, 666, 867, 1158, 1588, 1594, 1929
TasI AATT 7 cut(s) 33, 392, 601, 671, 688, 1584, 1963
TatI WGTACW 3 cut(s) 595, 1716, 1766
TfiI GAWTC 3 cut(s) 1359, 1643, 1877
Tru1I TTAA 8 cut(s) 609, 618, 660, 810, 888, 1143, 1194, 1431
Tru9I TTAA 8 cut(s) 609, 618, 660, 810, 888, 1143, 1194, 1431
TscAI CASTG 3 cut(s) 480, 517, 526
TseFI GTSAC 1 cut(s) 1782
TseI GCWGC 5 cut(s) 299, 431, 1124, 1439, 1997
Tsp45I GTSAC 1 cut(s) 1782
TspDTI ATGAA 5 cut(s) 1082, 1286, 1373, 1458, 1584
TspRI CASTG 3 cut(s) 480, 517, 526
VpaK11BI GGWCC 1 cut(s) 1734
XapI RAATTY 5 cut(s) 392, 601, 688, 1584, 1963
XbaI TCTAGA 1 cut(s) 1295
XmiI GTMKAC 2 cut(s) 867, 1451
XmnI GAANNNNTTC 4 cut(s) 228, 647, 1465, 1694
XspI CTAG 6 cut(s) 80, 96, 1044, 1296, 1614, 1887
ZrmI AGTACT 1 cut(s) 1768
Zsp2I ATGCAT 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.