Rh7BG007500

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001437
Physical Location & Seq
Forward (+)
451990 .. 452184
195 bp
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UTR
Exon/CDS
Intron
Rh7BG007500.1

Sequence Viewer

Length: 195 bp
ATGACGGCATCTTCTAACACTAGTTTCAGCATACAGGCAGCTGCTGATTCCTCGATTCCTCCCCTCATCAATGCCTATGAAGTTCATACCATCACTGGACCTCTAGCACAAGCAACCAACTCTAAAGATGGTACATCGCTAATTCGTTTCAACTGCGGCATATGTAACTGCATAATGGTTTATGGTATGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like

Protein Analysis

64

Amino Acids

6.7

Weight (kDa)

5.36

Isoelectric Point (pI)

6.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 156
AfaI GTAC 1 cut(s) 133
AgsI TTSAA 1 cut(s) 151
AhlI ACTAGT 1 cut(s) 20
AluBI AGCT 1 cut(s) 41
AluI AGCT 1 cut(s) 41
AlwNI CAGNNNCTG 1 cut(s) 44
ApeKI GCWGC 2 cut(s) 38, 41
AspS9I GGNCC 1 cut(s) 98
AvaII GGWCC 1 cut(s) 98
BbvI GCAGC 2 cut(s) 28, 50
BccI CCATC 2 cut(s) 98, 122
BceAI ACGGC 1 cut(s) 21
BcuI ACTAGT 1 cut(s) 20
BfaI CTAG 2 cut(s) 21, 104
BisI GCNGC 3 cut(s) 39, 42, 157
BlsI GCNGC 3 cut(s) 40, 43, 158
Bme18I GGWCC 1 cut(s) 98
BmgT120I GGNCC 1 cut(s) 98
BmsI GCATC 1 cut(s) 17
Bse1I ACTGG 1 cut(s) 100
BseNI ACTGG 1 cut(s) 100
BseXI GCAGC 2 cut(s) 28, 50
BspACI CCGC 1 cut(s) 156
BsrI ACTGG 1 cut(s) 100
BstV1I GCAGC 2 cut(s) 28, 50
BtgZI GCGATG 1 cut(s) 120
BtsIMutI CAGTG 1 cut(s) 93
CaiI CAGNNNCTG 1 cut(s) 44
Cfr13I GGNCC 1 cut(s) 98
Csp6I GTAC 1 cut(s) 132
CviJI RGCY 1 cut(s) 41
CviKI_1 RGCY 1 cut(s) 41
CviQI GTAC 1 cut(s) 132
Eco47I GGWCC 1 cut(s) 98
FaiI YATR 8 cut(s) 32, 78, 87, 161, 163, 173, 183, 188
FauNDI CATATG 1 cut(s) 161
Fnu4HI GCNGC 3 cut(s) 39, 42, 157
Fsp4HI GCNGC 3 cut(s) 39, 42, 157
FspBI CTAG 2 cut(s) 21, 104
GluI GCNGC 3 cut(s) 39, 42, 157
HinfI GANTC 2 cut(s) 47, 55
HpyCH4V TGCA 1 cut(s) 171
LpnPI CCDG 2 cut(s) 20, 81
Lsp1109I GCAGC 2 cut(s) 28, 50
LweI GCATC 1 cut(s) 17
MaeI CTAG 2 cut(s) 21, 104
MaeIII GTNAC 1 cut(s) 164
MboII GAAGA 1 cut(s) 3
MluCI AATT 1 cut(s) 141
MnlI CCTC 4 cut(s) 61, 69, 74, 111
MspA1I CMGCKG 1 cut(s) 41
NdeI CATATG 1 cut(s) 161
PfeI GAWTC 2 cut(s) 47, 55
PkrI GCNGC 3 cut(s) 40, 43, 158
PspPI GGNCC 1 cut(s) 98
PstNI CAGNNNCTG 1 cut(s) 44
PvuII CAGCTG 1 cut(s) 41
RsaI GTAC 1 cut(s) 133
RsaNI GTAC 1 cut(s) 132
SatI GCNGC 3 cut(s) 39, 42, 157
Sau96I GGNCC 1 cut(s) 98
SetI ASST 2 cut(s) 43, 103
SfaNI GCATC 1 cut(s) 17
SgeI CNNG 6 cut(s) 33, 47, 64, 108, 116, 122
SinI GGWCC 1 cut(s) 98
SpeI ACTAGT 1 cut(s) 20
Sse9I AATT 1 cut(s) 141
SsiI CCGC 1 cut(s) 156
SspMI CTAG 2 cut(s) 21, 104
TaqI TCGA 1 cut(s) 53
TasI AATT 1 cut(s) 141
TauI GCSGC 1 cut(s) 159
TfiI GAWTC 2 cut(s) 47, 55
TscAI CASTG 1 cut(s) 100
TseI GCWGC 2 cut(s) 38, 41
TspDTI ATGAA 2 cut(s) 74, 93
TspRI CASTG 1 cut(s) 100
VpaK11BI GGWCC 1 cut(s) 98
XspI CTAG 2 cut(s) 21, 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.