Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0001994

Physical Location & Seq

Genomic Coordinates Reverse (-)

32110922 .. 32114709

Gene Structure 3788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00409600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCCTCCTGTGACGACGACTTCTCTCTCCTCGGCAGTAACGACTCAAACCCTAACCACCGCAACCCTCACGCGCCTCCCAACTCCCACCGCATTCCCCAGCCCTACGCGCCTCGCTTCGCCACCCGAACCACCCCGCCCGTGGTCACCGTCTCCAGCGGCGACAAGGCCAACGCCGGAGAAGATCAGGACGACGGCGAGGACTACGGAGACGCCGCCGCGTTCTGTTCCAACCCCTTCGACAGCGGCACGGATCAGAACGACGTCGCGTCGAAGAGAAAGGACCAGTCCGATGAGCTCAGCGACGGAGCCGGCGGCGGCGGAGGAGGAGGAGGCTCGTACACCATCATCAGGAGATCGAAATCCTCGGCCGTGGCCGCCGGAGAGTACCGGAAGGATCGCGAGGAGTGGAGCGACGGCGCGATCGCTTGCCTTCTCGATGCGTACATGGACAAGTTCACGCAGCTGAATCGGGGAAATCTGAGAGGCCGGGATTGGGAGGAGGTGGCCGTGATCGTGAGCCAGAGGTCCGAGAGGCAAACCAAGAGCGTCGAGCAGTGTAAGAACAAGGTCGATAATTTGAAGAAGAGGTACAAGCTCGAGAGGCACAGGATGACCAATTCTGGAAATTCGCCGAGTCATTGGCCTTGGTTCAAGAGAATGGAGCAGATCGTTGGCAATTCGCTTCCGGCGAAGGCCACCTCTGATGATGACAGAGGCGTTACTTCCTCCGGTGCCACCCCTCAGAAATTAAAGAGAAATGCAAGTGCAATTACTAGTCCTGTGACTCAGATAAATAAGCAGCCGAAATTTAGTCTTAAATGGCGAAGAGTGGTGTTCAAAGTCAGTGGTGCTGCTCTAGCTGGCACTGCTGCTAACAACATTGACCCAAAGATAACAATGCTGATTGCGAGAGAAGTTGCAATGGCCTGCCGCAGTGGGGTGGAGGTGGCAATTGTTGTTGGTGGTCGCAACTTCTTTTGCGGAAATACGTGGGTGAATGAAACAGGTTTAGACAGAAGTACTGCATACCAGACTGGCATGATGACCACTGTAATGAATTCGATATTGCTCCAGTCAGCATTTGAGAAGATGGCAATCCAGACTCGTGTTCAAAGTGCATTTTCTCTGCCAGAGCTTGCTGAACCATACAATAGGCAACGGGCCATCCGGCATCTTGAAAAAGGCAGGGTTGTAATATTTGCTGGAATTGGTGCTGGCACTGGAAATCCACTTTTTACGACTGACACAGCTGCAGCACTTAGAGCTTCGGAAATCCATGCAGAGGCAGTACTCAAGGGTACCAATGTTGATGGTGTGTATGACCGCAATTCTCAAGACAATAATTTTACGTTCCAGCACATCTCTTTTAGGGAGTTGGTCACCAGAGGTGAGCACAACATGGACACAATGGCACTAACCTTATGCGAGGATAACAGGATTCCAGTTGTGATCTTTAATCTACTAGAGACTGGAAATATATCAAAAGCACTTCGTGGAGAACAAGTTGGTACCCTGATTGATCAGGTTGGAAGTATGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_kinase Myb_DNA-bind_4

Protein Analysis

514

Amino Acids

56.08

Weight (kDa)

8.08

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	134 - 224	8.4e-17	Myb/SANT-like DNA-binding domain
MADF_DNA_bdg	PF10545	158 - 222	5.5e-06	Alcohol dehydrogenase transcription factor Myb/SANT-like
AA_kinase	PF00696	277 - 487	1.3e-27	Amino acid kinase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10030 AT3G10030
fragaria_vesca	FvH4_6g17490 FvH4_6g17490 FvH4_6g17490 FvH4_6g17490
malus_domestica	MD12G1097000.v1.1 MD14G1094100.v1.1
prunus_persica	Prupe.7G120600_v2.0.a1 Prupe.7G120600_v2.0.a1 Prupe.7G120600_v2.0.a1 Prupe.7G120600_v2.0.a1 Prupe.7G120600_v2.0.a1 Prupe.7G120600_v2.0.a1
pyrus_communis	pycom14g09190
rosa_chinensis	RchiOBHm_Chr2g0173511 RchiOBHm_Chr3g0471731 RchiOBHm_Chr5g0071181
rosa_laevigata	RLG00000015608 RLG00000024138 RLG00000024278 RLG00000036093
rosa_multiflora	Rmu_sc0002476.1_g000019 Rmu_sc0004577.1_g000005 Rmu_sc0004577.1_g000006 Rmu_sc0013806.1_g000003 Rmu_sc0040530.1_g000001 Rmu_sc0041385.1_g000001 Rmu_ssc0000126.1_g000037 Rmu_ssc0000126.1_g000038
rosa_roxburghii	Rroxscaffold_3G00223840 Rroxscaffold_3G00265600 Rroxscaffold_6G00393240 Rroxscaffold_6G00409600
rosa_rugosa	Rorug03G0119300 Rorug03G0119400
rosa_samantha	Rh1CG168000 Rh2AG649600 Rh2DG555500 Rh2DG675400 Rh3BG196400 Rh3DG178500 Rh4BG099200 Rh4BG396300
rosa_wichuraiana	Rw0G009050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	267
Acc65I	GGTACC	2 cut(s)	1301, 1511
AccB1I	GGYRCC	3 cut(s)	734, 1301, 1511
AccII	CGCG	6 cut(s)	74, 110, 221, 269, 402, 422
AclWI	GGATC	2 cut(s)	261, 405
AcoI	YGGCCR	3 cut(s)	369, 375, 507
AcsI	RAATTY	3 cut(s)	628, 809, 1060
AcyI	GRCGYC	2 cut(s)	213, 264
AdeI	CACNNNGTG	1 cut(s)	1496
AfaI	GTAC	8 cut(s)	341, 389, 446, 593, 1024, 1293, 1303, 1513
AfiI	CCNNNNNNNGG	5 cut(s)	142, 351, 496, 940, 1285
AgsI	TTSAA	5 cut(s)	583, 655, 841, 1115, 1181
AhdI	GACNNNNNGTC	1 cut(s)	268
AhlI	ACTAGT	1 cut(s)	776
AluBI	AGCT	8 cut(s)	298, 466, 598, 863, 1138, 1253, 1268, 1542
AluI	AGCT	8 cut(s)	298, 466, 598, 863, 1138, 1253, 1268, 1542
Alw21I	GWGCWC	2 cut(s)	300, 1398
Alw26I	GTCTC	3 cut(s)	157, 204, 1463
AlwI	GGATC	2 cut(s)	261, 405
Ama87I	CYCGRG	1 cut(s)	599
ApeKI	GCWGC	6 cut(s)	463, 802, 854, 872, 1253, 1256
ApoI	RAATTY	3 cut(s)	628, 809, 1060
AsiSI	GCGATCGC	1 cut(s)	426
Asp718I	GGTACC	2 cut(s)	1301, 1511
AspLEI	GCGC	3 cut(s)	76, 112, 422
AspS9I	GGNCC	3 cut(s)	283, 528, 1164
AsuC2I	CCSGG	1 cut(s)	491
AsuHPI	GGTGA	4 cut(s)	139, 1009, 1375, 1403
AvaI	CYCGRG	1 cut(s)	599
AvaII	GGWCC	2 cut(s)	283, 528
BaeI	ACNNNNGTAYC	2 cut(s)	1293, 1326
BanI	GGYRCC	3 cut(s)	734, 1301, 1511
BanII	GRGCYC	1 cut(s)	300
BarI	GAAGNNNNNNTAC	2 cut(s)	575, 607
BauI	CACGAG	1 cut(s)	1107
Bbv12I	GWGCWC	2 cut(s)	300, 1398
BbvI	GCAGC	6 cut(s)	475, 814, 841, 859, 1240, 1268
BccI	CCATC	4 cut(s)	353, 1087, 1175, 1307
BceAI	ACGGC	4 cut(s)	211, 356, 433, 494
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BclI	TGATCA	1 cut(s)	1522
BcnI	CCSGG	1 cut(s)	491
BcoDI	GTCTC	3 cut(s)	157, 204, 1463
BcuI	ACTAGT	1 cut(s)	776
BfaI	CTAG	3 cut(s)	777, 860, 1466
BfmI	CTRYAG	1 cut(s)	1254
BlpI	GCTNAGC	1 cut(s)	299
BmcAI	AGTACT	2 cut(s)	1024, 1293
Bme1390I	CCNGG	1 cut(s)	491
Bme18I	GGWCC	2 cut(s)	283, 528
BmeRI	GACNNNNNGTC	1 cut(s)	268
BmeT110I	CYCGRG	1 cut(s)	599
BmgT120I	GGNCC	3 cut(s)	283, 528, 1164
BmiI	GGNNCC	4 cut(s)	310, 736, 1303, 1513
BmrFI	CCNGG	1 cut(s)	491
BmsI	GCATC	2 cut(s)	430, 1183
BpmI	CTGGAG	2 cut(s)	139, 1058
Bpu1102I	GCTNAGC	1 cut(s)	299
BpuEI	CTTGAG	2 cut(s)	1280, 1320
BpuMI	CCSGG	1 cut(s)	491
BsaAI	YACGTR	1 cut(s)	993
BsaBI	GATNNNNATC	2 cut(s)	361, 1097
BsaHI	GRCGYC	2 cut(s)	213, 264
BsaJI	CCNNGG	5 cut(s)	31, 141, 366, 372, 647
BsaWI	WCCGGW	2 cut(s)	390, 731
BsaXI	ACNNNNNCTCC	2 cut(s)	1491, 1521
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 351, 496, 940, 1285
Bse118I	RCCGGY	1 cut(s)	311
Bse1I	ACTGG	6 cut(s)	286, 1042, 1075, 1228, 1445, 1477
Bse3DI	GCAATG	1 cut(s)	930
Bse8I	GATNNNNATC	2 cut(s)	361, 1097
BseDI	CCNNGG	5 cut(s)	31, 141, 366, 372, 647
BseGI	GGATG	2 cut(s)	618, 1167
BseJI	GATNNNNATC	2 cut(s)	361, 1097
BseLI	CCNNNNNNNGG	5 cut(s)	142, 351, 496, 940, 1285
BseMI	GCAATG	1 cut(s)	930
BseMII	CTCAG	4 cut(s)	313, 473, 758, 803
BseNI	ACTGG	6 cut(s)	286, 1042, 1075, 1228, 1445, 1477
BseRI	GAGGAG	6 cut(s)	20, 339, 342, 345, 419, 515
BseX3I	CGGCCG	1 cut(s)	369
BseXI	GCAGC	6 cut(s)	475, 814, 841, 859, 1240, 1268
BseYI	CCCAGC	1 cut(s)	99
Bsh1236I	CGCG	6 cut(s)	74, 110, 221, 269, 402, 422
Bsh1285I	CGRYCG	2 cut(s)	372, 426
BshNI	GGYRCC	3 cut(s)	734, 1301, 1511
BsiEI	CGRYCG	2 cut(s)	372, 426
BsiHKAI	GWGCWC	2 cut(s)	300, 1398
BsiHKCI	CYCGRG	1 cut(s)	599
BsiSI	CCGG	8 cut(s)	177, 312, 381, 391, 490, 689, 732, 1171
BslI	CCNNNNNNNGG	5 cut(s)	142, 351, 496, 940, 1285
BsmAI	GTCTC	3 cut(s)	157, 204, 1463
BsmBI	CGTCTC	2 cut(s)	157, 204
BsmI	GAATGC	1 cut(s)	93
BsoBI	CYCGRG	1 cut(s)	599
Bsp1286I	GDGCHC	2 cut(s)	300, 1398
Bsp143I	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
Bsp1720I	GCTNAGC	1 cut(s)	299
Bsp68I	TCGCGA	1 cut(s)	402
BspCNI	CTCAG	4 cut(s)	312, 474, 757, 802
BspFNI	CGCG	6 cut(s)	74, 110, 221, 269, 402, 422
BspLI	GGNNCC	4 cut(s)	310, 736, 1303, 1513
BspMAI	CTGCAG	1 cut(s)	1258
BspPI	GGATC	2 cut(s)	261, 405
BspT107I	GGYRCC	3 cut(s)	734, 1301, 1511
BsrDI	GCAATG	1 cut(s)	930
BsrFI	RCCGGY	1 cut(s)	311
BsrI	ACTGG	6 cut(s)	286, 1042, 1075, 1228, 1445, 1477
BssAI	RCCGGY	1 cut(s)	311
BssECI	CCNNGG	5 cut(s)	31, 141, 366, 372, 647
BssMI	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
BssNI	GRCGYC	2 cut(s)	213, 264
BssSI	CACGAG	1 cut(s)	1107
BssT1I	CCWWGG	1 cut(s)	647
Bst2BI	CACGAG	1 cut(s)	1107
Bst4CI	ACNGT	2 cut(s)	151, 1054
Bst6I	CTCTTC	3 cut(s)	269, 581, 823
BstACI	GRCGYC	2 cut(s)	213, 264
BstBAI	YACGTR	1 cut(s)	993
BstC8I	GCNNGC	6 cut(s)	313, 430, 865, 931, 1140, 1219
BstDEI	CTNAG	5 cut(s)	299, 482, 744, 789, 1262
BstDSI	CCRYGG	2 cut(s)	141, 372
BstEII	GGTNACC	2 cut(s)	145, 1381
BstF5I	GGATG	2 cut(s)	618, 1167
BstFNI	CGCG	6 cut(s)	74, 110, 221, 269, 402, 422
BstHHI	GCGC	3 cut(s)	76, 112, 422
BstKTI	GATC	9 cut(s)	187, 256, 359, 400, 426, 516, 672, 1455, 1525
BstMAI	GTCTC	3 cut(s)	157, 204, 1463
BstMBI	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
BstMCI	CGRYCG	2 cut(s)	372, 426
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 377, 604, 860, 869, 1265
BstPI	GGTNACC	2 cut(s)	145, 1381
BstSCI	CCNGG	1 cut(s)	489
BstSFI	CTRYAG	1 cut(s)	1254
BstUI	CGCG	6 cut(s)	74, 110, 221, 269, 402, 422
BstV1I	GCAGC	6 cut(s)	475, 814, 841, 859, 1240, 1268
BstZI	CGGCCG	1 cut(s)	369
BtgI	CCRYGG	2 cut(s)	141, 372
BtsCI	GGATG	2 cut(s)	618, 1167
BtsI	GCAGTG	3 cut(s)	563, 867, 943
BtsIMutI	CAGTG	6 cut(s)	563, 853, 867, 943, 1050, 1221
BtuMI	TCGCGA	1 cut(s)	402
Cac8I	GCNNGC	6 cut(s)	313, 430, 865, 931, 1140, 1219
CfoI	GCGC	3 cut(s)	76, 112, 422
Cfr10I	RCCGGY	1 cut(s)	311
Cfr13I	GGNCC	3 cut(s)	283, 528, 1164
CseI	GACGC	3 cut(s)	221, 258, 538
Csp6I	GTAC	8 cut(s)	340, 388, 445, 592, 1023, 1292, 1302, 1512
CspCI	CAANNNNNGTGG	2 cut(s)	829, 864
CviAII	CATG	4 cut(s)	448, 1042, 1280, 1402
CviQI	GTAC	8 cut(s)	340, 388, 445, 592, 1023, 1292, 1302, 1512
DdeI	CTNAG	5 cut(s)	299, 482, 744, 789, 1262
DpnI	GATC	9 cut(s)	186, 255, 358, 399, 425, 515, 671, 1454, 1524
DpnII	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
DraIII	CACNNNGTG	1 cut(s)	1496
DriI	GACNNNNNGTC	1 cut(s)	268
EaeI	YGGCCR	3 cut(s)	369, 375, 507
EagI	CGGCCG	1 cut(s)	369
Eam1104I	CTCTTC	3 cut(s)	269, 581, 823
Eam1105I	GACNNNNNGTC	1 cut(s)	268
EarI	CTCTTC	3 cut(s)	269, 581, 823
EciI	GGCGGA	1 cut(s)	336
Ecl136II	GAGCTC	1 cut(s)	298
EclXI	CGGCCG	1 cut(s)	369
Eco130I	CCWWGG	1 cut(s)	647
Eco24I	GRGCYC	1 cut(s)	300
Eco47I	GGWCC	2 cut(s)	283, 528
Eco52I	CGGCCG	1 cut(s)	369
Eco53kI	GAGCTC	1 cut(s)	298
Eco88I	CYCGRG	1 cut(s)	599
Eco91I	GGTNACC	2 cut(s)	145, 1381
EcoICRI	GAGCTC	1 cut(s)	298
EcoO65I	GGTNACC	2 cut(s)	145, 1381
EcoRI	GAATTC	1 cut(s)	1060
EcoT14I	CCWWGG	1 cut(s)	647
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	647
Esp3I	CGTCTC	2 cut(s)	157, 204
FaeI	CATG	4 cut(s)	451, 1045, 1283, 1405
FatI	CATG	4 cut(s)	447, 1041, 1279, 1401
FauI	CCCGC	1 cut(s)	144
FbaI	TGATCA	1 cut(s)	1522
FokI	GGATG	2 cut(s)	625, 1154
FriOI	GRGCYC	1 cut(s)	300
FspBI	CTAG	3 cut(s)	777, 860, 1466
GlaI	GCGC	3 cut(s)	75, 111, 421
GsaI	CCCAGC	1 cut(s)	103
GsuI	CTGGAG	2 cut(s)	139, 1058
HapII	CCGG	8 cut(s)	177, 312, 381, 391, 490, 689, 732, 1171
HgaI	GACGC	3 cut(s)	221, 258, 538
HhaI	GCGC	3 cut(s)	76, 112, 422
Hin1I	GRCGYC	2 cut(s)	213, 264
Hin1II	CATG	4 cut(s)	451, 1045, 1283, 1405
Hin6I	GCGC	3 cut(s)	74, 110, 420
HinP1I	GCGC	3 cut(s)	74, 110, 420
HinfI	GANTC	6 cut(s)	44, 469, 637, 787, 1105, 1441
HpaII	CCGG	8 cut(s)	177, 312, 381, 391, 490, 689, 732, 1171
HphI	GGTGA	4 cut(s)	139, 1009, 1375, 1403
Hpy166II	GTNNAC	2 cut(s)	342, 459
Hpy188I	TCNGA	8 cut(s)	258, 292, 483, 532, 706, 747, 792, 1273
Hpy8I	GTNNAC	2 cut(s)	342, 459
Hpy99I	CGWCG	8 cut(s)	20, 197, 266, 269, 274, 308, 419, 554
HpyAV	CCTTC	4 cut(s)	247, 388, 443, 688
HpyCH4III	ACNGT	2 cut(s)	151, 1054
HpyCH4IV	ACGT	3 cut(s)	264, 992, 1352
HpyCH4V	TGCA	7 cut(s)	764, 770, 923, 1028, 1121, 1256, 1283
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 377, 604, 860, 869, 1265
HpyF3I	CTNAG	5 cut(s)	299, 482, 744, 789, 1262
HpySE526I	ACGT	3 cut(s)	264, 992, 1352
Hsp92I	GRCGYC	2 cut(s)	213, 264
Hsp92II	CATG	4 cut(s)	451, 1045, 1283, 1405
HspAI	GCGC	3 cut(s)	74, 110, 420
KpnI	GGTACC	2 cut(s)	1305, 1515
KroI	GCCGGC	1 cut(s)	311
KroNI	GCCGGC	1 cut(s)	313
Ksp22I	TGATCA	1 cut(s)	1522
Kzo9I	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
LmnI	GCTCC	4 cut(s)	308, 411, 664, 1077
Lsp1109I	GCAGC	6 cut(s)	475, 814, 841, 859, 1240, 1268
LweI	GCATC	2 cut(s)	430, 1183
MaeI	CTAG	3 cut(s)	777, 860, 1466
MaeII	ACGT	3 cut(s)	264, 992, 1352
MaeIII	GTNAC	6 cut(s)	11, 38, 145, 721, 784, 1381
MalI	GATC	9 cut(s)	186, 255, 358, 399, 425, 515, 671, 1454, 1524
MboI	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
MboII	GAAGA	6 cut(s)	194, 286, 595, 598, 840, 1102
MfeI	CAATTG	1 cut(s)	954
MhlI	GDGCHC	2 cut(s)	300, 1398
MlyI	GAGTC	4 cut(s)	38, 646, 781, 1099
MmeI	TCCRAC	2 cut(s)	255, 1510
MroNI	GCCGGC	1 cut(s)	311
MseI	TTAA	3 cut(s)	752, 819, 1458
MslI	CAYNNNNRTG	1 cut(s)	1055
MspA1I	CMGCKG	4 cut(s)	159, 246, 466, 1253
MspI	CCGG	8 cut(s)	177, 312, 381, 391, 490, 689, 732, 1171
MspR9I	CCNGG	1 cut(s)	491
MunI	CAATTG	1 cut(s)	954
Mva1269I	GAATGC	1 cut(s)	93
MvnI	CGCG	6 cut(s)	74, 110, 221, 269, 402, 422
MwoI	GCNNNNNNNGC	6 cut(s)	109, 377, 604, 860, 869, 1265
NaeI	GCCGGC	1 cut(s)	313
NciI	CCSGG	1 cut(s)	491
NdeII	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
NgoMIV	GCCGGC	1 cut(s)	311
NlaIII	CATG	4 cut(s)	451, 1045, 1283, 1405
NlaIV	GGNNCC	4 cut(s)	310, 736, 1303, 1513
NmeAIII	GCCGAG	3 cut(s)	12, 347, 660
NmuCI	GTSAC	4 cut(s)	11, 145, 784, 1381
NruI	TCGCGA	1 cut(s)	402
PaeR7I	CTCGAG	1 cut(s)	599
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 689
PctI	GAATGC	1 cut(s)	93
PdiI	GCCGGC	1 cut(s)	313
PfeI	GAWTC	2 cut(s)	469, 1441
Ple19I	CGATCG	1 cut(s)	426
PleI	GAGTC	4 cut(s)	38, 645, 781, 1099
PpsI	GAGTC	4 cut(s)	38, 645, 781, 1099
Ppu21I	YACGTR	1 cut(s)	993
Psp124BI	GAGCTC	1 cut(s)	300
PspEI	GGTNACC	2 cut(s)	145, 1381
PspFI	CCCAGC	1 cut(s)	99
PspN4I	GGNNCC	4 cut(s)	310, 736, 1303, 1513
PspPI	GGNCC	3 cut(s)	283, 528, 1164
PstI	CTGCAG	1 cut(s)	1258
PvuI	CGATCG	1 cut(s)	426
PvuII	CAGCTG	2 cut(s)	466, 1253
RgaI	GCGATCGC	1 cut(s)	426
RruI	TCGCGA	1 cut(s)	402
RsaI	GTAC	8 cut(s)	341, 389, 446, 593, 1024, 1293, 1303, 1513
RsaNI	GTAC	8 cut(s)	340, 388, 445, 592, 1023, 1292, 1302, 1512
RseI	CAYNNNNRTG	1 cut(s)	1055
SacI	GAGCTC	1 cut(s)	300
SaqAI	TTAA	3 cut(s)	752, 819, 1458
Sau3AI	GATC	9 cut(s)	184, 253, 356, 397, 423, 513, 669, 1452, 1522
Sau96I	GGNCC	3 cut(s)	283, 528, 1164
ScaI	AGTACT	2 cut(s)	1024, 1293
SchI	GAGTC	4 cut(s)	38, 646, 781, 1099
ScrFI	CCNGG	1 cut(s)	491
SduI	GDGCHC	2 cut(s)	300, 1398
SfaAI	GCGATCGC	1 cut(s)	426
SfaNI	GCATC	2 cut(s)	430, 1183
SfcI	CTRYAG	1 cut(s)	1254
Sfr274I	CTCGAG	1 cut(s)	599
SgfI	GCGATCGC	1 cut(s)	426
SinI	GGWCC	2 cut(s)	283, 528
SlaI	CTCGAG	1 cut(s)	599
SmiMI	CAYNNNNRTG	1 cut(s)	1055
SmlI	CTYRAG	3 cut(s)	599, 1295, 1335
SmoI	CTYRAG	3 cut(s)	599, 1295, 1335
SpeI	ACTAGT	1 cut(s)	776
SspI	AATATT	1 cut(s)	1200
SspMI	CTAG	3 cut(s)	777, 860, 1466
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	1 cut(s)	489
StyI	CCWWGG	1 cut(s)	647
TaaI	ACNGT	2 cut(s)	151, 1054
TaiI	ACGT	3 cut(s)	267, 995, 1355
TaqI	TCGA	8 cut(s)	240, 272, 359, 438, 552, 573, 600, 1064
TatI	WGTACW	2 cut(s)	1022, 1291
TauI	GCSGC	8 cut(s)	162, 218, 221, 249, 318, 321, 380, 936
TfiI	GAWTC	2 cut(s)	469, 1441
Tru1I	TTAA	3 cut(s)	752, 819, 1458
Tru9I	TTAA	3 cut(s)	752, 819, 1458
TscAI	CASTG	6 cut(s)	563, 853, 874, 943, 1057, 1228
TseFI	GTSAC	4 cut(s)	11, 145, 784, 1381
TseI	GCWGC	6 cut(s)	463, 802, 854, 872, 1253, 1256
Tsp45I	GTSAC	4 cut(s)	11, 145, 784, 1381
TspDTI	ATGAA	2 cut(s)	1017, 1073
TspGWI	ACGGA	3 cut(s)	222, 266, 321
TspRI	CASTG	6 cut(s)	563, 853, 874, 943, 1057, 1228
VpaK11BI	GGWCC	2 cut(s)	283, 528
XapI	RAATTY	3 cut(s)	628, 809, 1060
XcmI	CCANNNNNNNNNTGG	1 cut(s)	139
XhoI	CTCGAG	1 cut(s)	599
XspI	CTAG	3 cut(s)	777, 860, 1466
ZraI	GACGTC	1 cut(s)	265
ZrmI	AGTACT	2 cut(s)	1024, 1293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.