Rorug01G0278200

Belongs to the yippee family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000903
Physical Location & Seq
Reverse (-)
39144481 .. 39147060
2580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0278200.1

Sequence Viewer

Length: 2580 bp
ATGGTTTGCCACAAAGTAGCAGCTGCTTCCTTTCAACTTTTTTGTCTTGTTAGTTTCCTTCTTTTCTTAAATCCATATTCTTCTATTTTCCTTGAAGCCACAACAATATTTGCCAACTCCAAAACTGTCGATGATGAGAGGTCCAATGCAGCTTGCATTGAGGAAGAGAGGAAGGCCCTCCTTGAATTCAAGCAAGGTCTTCAAGATCCTTTGCTTGCGCTTCATTCTTGGGTTGGCAAAGACTGCTGCAACTGGCATGGCATAGTCTGTAACAACCAAACAGGTAACATCATCGAACTTCGTCTTTTGGATACAAAAATCTCTGGTACACTCTCAGTGTCAATAGGAAGTCTTTCGCATTTGGAGGCTTTGATCCTTTCCAACAATTTGTTCTCCGGTCCACTTCCGATATCAATCGGAAATCTTTCACATTTGCAGCACTTGGACCTTTCTTTCAACTCAATCTCAGGTCCACTTCCAACATCGATTGGAAATCTTTTAAATTTGCAGACCTTGGACCTTTATGTAAACTCAATCCTAGGTCTACTTCCAACATCAATTGGAAATCTTTCAACTTTGCTGACCTTGGACCTTTCTATCAATTCAATCTCCAGTCCACTTCCAACATCGATTGGAAATCTTTCGCATTTAGAGACCTTGGACCTATCCTCTAACTCAATCTCCGGCCGACTTCCGATATCAATTGGAAATCTTTCAAATTTGCAGGAGCTGAGCCTCTCAAGGAATGCAATCTCAGGTCCACTTCCAACATGGATAGGAAATCTGCCATATTTACAGGTGCTGGACCTTTCCGACAACTCAAAAATGAATGGAACTATTCCAGAAAGCATTGGTCAACTTAGAGAGTTAAAGCACTTGTATCTCGACGGTTCATGGGAAGGCTTTATATCTAAAAATCTTTTTCAGAACACTAGATTGGAATCGTTTTATTTATCCTGCGAGGTCTCTAACTCTTTGGTTTTCAACGTCAGTGATGACTGGATTCCTTTCTTCAATTTTACAAGTCTCGGGATCACGGATTGTAAACTAACGGATACAGCTTTTCCAGTGTGGCTCAGAAGTCAAAAATTCCTCAAGAGCTTAACTCTTGAGAGAGTCGGAATTTCAGATATAATACCCGATTGGTTTTGGAGATTTTCACCATTCCTTGAGTTTGTGAGGTTATCTCATAACCAGTTAAGAGGGAACCTTCCTAAGTCTGTGAGTTCTCCTCTTCAATCCGTTAATTTGAAAAACAACAGCTTGGTAGGTTCCCTTCCACTTTGGCCATATGTAACAGAGCTAAGCTTGTCAAGCAATAGATTTTCAGGGTCTATTCCTTTGAACATTGGCCACGAGATGTCAGAGTTGCGAGTCCTAGGTCTTTCTAGAAATAATCTAACTGGTAGTGTTCCCCCTTCCTTGAGTAAAATGAAGTCATTGGTGTTTCTTGATCTCTCAAGGAATTATTTCTCTGGAAATATTCCTAGGGATTGGACGAGTATGAAAGATTTGATGATCATAGACTTTTCAAATAATAAACTATCTGGCGAAATCTCGACCTCCATGTGCTCCCAACTACCATCACTCAAATGGTTGAGATTACGCAACAACAGTCTTTCTGGGAATCTTGAGTTGTCTTTGCAAATTTGCAGAAATCTCTCTGCACTTGATCTGACAGGAAACAAATTCTCCGGAGTCATACCAAAATGGGTTGGAAAAAACCTCAATTCGTTGTCTTATTTACTTCTAGGAGCCAACAAGTTTACTGGAAATATTCCTCAGCAACTATGTGGTCTTTCCTCTCTTCAGATTTTAGACCTTTCTCTTAATAACTTATCAGGTCCCATCCCTACATGTCTTGGCAATTTGAAACAAATGACAAAGGGAGGTAGCATGCCTGAGCTTTGGATGTCAGACTTGATGTCCTACGAGATCCTTCATGATCTTATGCATATGGACTTAAATGTGAAAGGATTAGAATATGAATATATTGATAATCCCCTACTATTCACGAACAAGTTTGACCTGTCAAGTAACCATCTATGTGGAGAAATACCAGAAGAGATCAAAAATCTCACGGCCTTGAGGAGCTTGAACTTATCACACAACCATTTGACGGGAAAGATACCGTTCGGTATTGAAAGCTTACATGTATTAGAAGCCCTTGACCTCTCTAGTAATCATCTTTGGGGTCCAATTCCTTTGAGCATGACCTCTATGACTGCACTAAACAAATTGAATTTGTCATTCAACAACTTCTCTGGGCCAATTCCATCAGCCAACCAATTCCTCACCTTCAATGATCCAACCTCATTTGAAGGAAACTCAGGACTTTGTGGACCTCCATTGCCAACCCAATGCAGTTCAGTGTCCCATAATGATCCAGCTGCAAAGGTTGACGAAGATGAAGAAGATAAGTATGTAAAATTATGGTTCTATGCAAGCACAGCATTGGGGTTCATTGTAGGATTCTGGGTTGTTTTTGGAAGTTTGGTGATAAAGAGGTCATGGAGACATGCTTATTTCCAGTTTCTTGACAATATGAAAGACAAGCTTTGCTTCTATTTTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Yippee-Mis18

Protein Analysis

859

Amino Acids

95.34

Weight (kDa)

5.9

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 54 - 91 1.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 90 - 174 2.7e-07 Leucine-rich repeat region
LRR_14 PF23598 139 - 198 1.4e-08 Leucine-rich repeat region
LRR_8 PF13855 168 - 227 1.2e-06 Leucine rich repeat
LRR_8 PF13855 195 - 251 4.3e-07 Leucine rich repeat
LRR_14 PF23598 204 - 365 5.7e-17 Leucine-rich repeat region
LRR_8 PF13855 239 - 297 4.3e-09 Leucine rich repeat
LRR_8 PF13855 431 - 490 4.8e-08 Leucine rich repeat
LRR_8 PF13855 495 - 540 5.2e-06 Leucine rich repeat
LRR_8 PF13855 552 - 613 8.5e-07 Leucine rich repeat
LRR_8 PF13855 674 - 730 4.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 544
AccIII TCCGGA 1 cut(s) 1694
AclWI GGATC 6 cut(s) 200, 367, 1040, 1930, 2300, 2378
AcoI YGGCCR 3 cut(s) 685, 1286, 1351
AcsI RAATTY 8 cut(s) 185, 502, 718, 1088, 1122, 1647, 1688, 2242
AcuI CTGAAG 1 cut(s) 1793
AfaI GTAC 1 cut(s) 328
AfiI CCNNNNNNNGG 1 cut(s) 2119
AflIII ACRYGT 2 cut(s) 1856, 2152
AhdI GACNNNNNGTC 1 cut(s) 1924
AjuI GAANNNNNNNTTGG 4 cut(s) 374, 406, 920, 952
Alw21I GWGCWC 1 cut(s) 1574
Alw26I GTCTC 4 cut(s) 647, 970, 1031, 2509
AlwI GGATC 6 cut(s) 200, 367, 1040, 1930, 2300, 2378
AlwNI CAGNNNCTG 2 cut(s) 730, 802
Ama87I CYCGRG 1 cut(s) 1028
Aor13HI TCCGGA 1 cut(s) 1694
AoxI GGCC 6 cut(s) 174, 685, 1286, 1351, 2082, 2267
ApeKI GCWGC 6 cut(s) 20, 23, 149, 246, 436, 2390
ApoI RAATTY 8 cut(s) 185, 502, 718, 1088, 1122, 1647, 1688, 2242
Asp700I GAANNNNTTC 6 cut(s) 352, 424, 568, 640, 712, 1469
AspA2I CCTAGG 3 cut(s) 538, 1378, 1487
AspLEI GCGC 1 cut(s) 220
AsuHPI GGTGA 3 cut(s) 1152, 2287, 2509
AvaI CYCGRG 1 cut(s) 1028
AvrII CCTAGG 3 cut(s) 538, 1378, 1487
BalI TGGCCA 2 cut(s) 1288, 1353
BarI GAAGNNNNNNTAC 2 cut(s) 1260, 1292
BauI CACGAG 1 cut(s) 1355
BbsI GAAGAC 1 cut(s) 191
Bbv12I GWGCWC 1 cut(s) 1574
BbvCI CCTCAGC 1 cut(s) 1782
BbvI GCAGC 6 cut(s) 10, 32, 161, 233, 448, 2377
BccI CCATC 4 cut(s) 1591, 1856, 2049, 2284
BceAI ACGGC 1 cut(s) 2097
BciVI GTATCC 2 cut(s) 304, 1048
BclI TGATCA 1 cut(s) 1518
BcoDI GTCTC 4 cut(s) 647, 970, 1031, 2509
BfaI CTAG 7 cut(s) 539, 933, 1379, 1389, 1488, 1751, 2178
BfuI GTATCC 2 cut(s) 304, 1048
BisI GCNGC 6 cut(s) 21, 24, 150, 247, 437, 2391
BlnI CCTAGG 3 cut(s) 538, 1378, 1487
BlpI GCTNAGC 2 cut(s) 731, 1304
BlsI GCNGC 6 cut(s) 22, 25, 151, 248, 438, 2392
BmeRI GACNNNNNGTC 1 cut(s) 1924
BmeT110I CYCGRG 1 cut(s) 1028
BmiI GGNNCC 5 cut(s) 1208, 1273, 1756, 1846, 2196
BpiI GAAGAC 1 cut(s) 191
BplI GAGNNNNNCTC 6 cut(s) 1090, 1122, 1171, 1203, 1216, 1248
BpmI CTGGAG 1 cut(s) 595
Bpu10I CCTNAGC 2 cut(s) 1782, 1902
Bpu1102I GCTNAGC 2 cut(s) 731, 1304
BpuEI CTTGAG 8 cut(s) 724, 1079, 1130, 1190, 1444, 1444, 1652, 2107
Bsa29I ATCGAT 2 cut(s) 485, 629
BsaBI GATNNNNATC 2 cut(s) 413, 940
BsaI GGTCTC 2 cut(s) 647, 970
BsaJI CCNNGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
BsaWI WCCGGW 2 cut(s) 395, 1694
BsaXI ACNNNNNCTCC 4 cut(s) 665, 695, 1676, 1706
Bsc4I CCNNNNNNNGG 1 cut(s) 2119
Bse1I ACTGG 8 cut(s) 257, 612, 1004, 1067, 1195, 1408, 1774, 2530
Bse3DI GCAATG 1 cut(s) 2348
Bse8I GATNNNNATC 2 cut(s) 413, 940
BseAI TCCGGA 1 cut(s) 1694
BseCI ATCGAT 2 cut(s) 485, 629
BseDI CCNNGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
BseGI GGATG 2 cut(s) 1848, 1917
BseJI GATNNNNATC 2 cut(s) 413, 940
BseLI CCNNNNNNNGG 1 cut(s) 2119
BseMI GCAATG 1 cut(s) 2348
BseMII CTCAG 8 cut(s) 348, 480, 722, 768, 1090, 1796, 1893, 2343
BseNI ACTGG 8 cut(s) 257, 612, 1004, 1067, 1195, 1408, 1774, 2530
BseRI GAGGAG 2 cut(s) 1221, 2104
BseX3I CGGCCG 1 cut(s) 685
BseXI GCAGC 6 cut(s) 10, 32, 161, 233, 448, 2377
BsgI GTGCAG 2 cut(s) 1650, 2211
Bsh1285I CGRYCG 1 cut(s) 688
BshFI GGCC 6 cut(s) 176, 687, 1288, 1353, 2084, 2269
BshVI ATCGAT 2 cut(s) 485, 629
BsiEI CGRYCG 1 cut(s) 688
BsiHKAI GWGCWC 1 cut(s) 1574
BsiHKCI CYCGRG 1 cut(s) 1028
BsiSI CCGG 3 cut(s) 396, 684, 1695
BslFI GGGAC 2 cut(s) 1830, 2359
BslI CCNNNNNNNGG 1 cut(s) 2119
BsmAI GTCTC 4 cut(s) 647, 970, 1031, 2509
BsmFI GGGAC 2 cut(s) 1830, 2359
BsmI GAATGC 1 cut(s) 751
BsnI GGCC 6 cut(s) 176, 687, 1288, 1353, 2084, 2269
Bso31I GGTCTC 2 cut(s) 647, 970
BsoBI CYCGRG 1 cut(s) 1028
Bsp1286I GDGCHC 1 cut(s) 1574
Bsp13I TCCGGA 1 cut(s) 1694
Bsp1720I GCTNAGC 2 cut(s) 731, 1304
BspANI GGCC 6 cut(s) 176, 687, 1288, 1353, 2084, 2269
BspCNI CTCAG 8 cut(s) 347, 479, 723, 767, 1089, 1795, 1894, 2342
BspDI ATCGAT 2 cut(s) 485, 629
BspEI TCCGGA 1 cut(s) 1694
BspHI TCATGA 1 cut(s) 1942
BspLI GGNNCC 5 cut(s) 1208, 1273, 1756, 1846, 2196
BspPI GGATC 6 cut(s) 200, 367, 1040, 1930, 2300, 2378
BspTNI GGTCTC 2 cut(s) 647, 970
BsrDI GCAATG 1 cut(s) 2348
BsrI ACTGG 8 cut(s) 257, 612, 1004, 1067, 1195, 1408, 1774, 2530
BssECI CCNNGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
BssSI CACGAG 1 cut(s) 1355
BssT1I CCWWGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
Bst2BI CACGAG 1 cut(s) 1355
Bst4CI ACNGT 4 cut(s) 127, 890, 1616, 2133
Bst6I CTCTTC 4 cut(s) 159, 1239, 1812, 2058
BstAPI GCANNNNNTGC 1 cut(s) 243
BstC8I GCNNGC 4 cut(s) 154, 216, 1898, 2446
BstF5I GGATG 2 cut(s) 1848, 1917
BstHHI GCGC 1 cut(s) 220
BstMAI GTCTC 4 cut(s) 647, 970, 1031, 2509
BstMCI CGRYCG 1 cut(s) 688
BstMWI GCNNNNNNNGC 3 cut(s) 243, 1314, 2450
BstNSI RCATGY 4 cut(s) 1860, 1900, 2156, 2522
BstV1I GCAGC 6 cut(s) 10, 32, 161, 233, 448, 2377
BstV2I GAAGAC 1 cut(s) 191
BstX2I RGATCY 2 cut(s) 205, 1935
BstXI CCANNNNNNTGG 1 cut(s) 2048
BstYI RGATCY 2 cut(s) 205, 1935
BstZI CGGCCG 1 cut(s) 685
Bsu15I ATCGAT 2 cut(s) 485, 629
BsuI GTATCC 2 cut(s) 304, 1048
BsuRI GGCC 6 cut(s) 176, 687, 1288, 1353, 2084, 2269
BsuTUI ATCGAT 2 cut(s) 485, 629
BtsCI GGATG 2 cut(s) 1848, 1917
BtsIMutI CAGTG 4 cut(s) 342, 997, 1074, 2376
Cac8I GCNNGC 4 cut(s) 154, 216, 1898, 2446
CaiI CAGNNNCTG 2 cut(s) 730, 802
CciI TCATGA 1 cut(s) 1942
CfoI GCGC 1 cut(s) 220
ClaI ATCGAT 2 cut(s) 485, 629
Csp6I GTAC 1 cut(s) 327
CviQI GTAC 1 cut(s) 327
DraI TTTAAA 1 cut(s) 501
DriI GACNNNNNGTC 1 cut(s) 1924
EaeI YGGCCR 3 cut(s) 685, 1286, 1351
EagI CGGCCG 1 cut(s) 685
Eam1104I CTCTTC 4 cut(s) 159, 1239, 1812, 2058
Eam1105I GACNNNNNGTC 1 cut(s) 1924
EarI CTCTTC 4 cut(s) 159, 1239, 1812, 2058
EclXI CGGCCG 1 cut(s) 685
Eco130I CCWWGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
Eco31I GGTCTC 2 cut(s) 647, 970
Eco32I GATATC 2 cut(s) 411, 699
Eco52I CGGCCG 1 cut(s) 685
Eco57I CTGAAG 1 cut(s) 1793
Eco88I CYCGRG 1 cut(s) 1028
EcoO109I RGGNCCY 2 cut(s) 175, 1844
EcoRI GAATTC 1 cut(s) 185
EcoRV GATATC 2 cut(s) 411, 699
EcoT14I CCWWGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
EcoT22I ATGCAT 1 cut(s) 1956
ErhI CCWWGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
FalI AAGNNNNNCTT 4 cut(s) 2541, 2573, 2546, 2578
FaqI GGGAC 2 cut(s) 1830, 2359
FauNDI CATATG 2 cut(s) 1291, 1956
FbaI TGATCA 1 cut(s) 1518
FblI GTMKAC 1 cut(s) 544
Fnu4HI GCNGC 6 cut(s) 21, 24, 150, 247, 437, 2391
FokI GGATG 2 cut(s) 1835, 1924
Fsp4HI GCNGC 6 cut(s) 21, 24, 150, 247, 437, 2391
FspBI CTAG 7 cut(s) 539, 933, 1379, 1389, 1488, 1751, 2178
GlaI GCGC 1 cut(s) 219
GluI GCNGC 6 cut(s) 21, 24, 150, 247, 437, 2391
GsuI CTGGAG 1 cut(s) 595
HaeIII GGCC 6 cut(s) 176, 687, 1288, 1353, 2084, 2269
HapII CCGG 3 cut(s) 396, 684, 1695
HhaI GCGC 1 cut(s) 220
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 2 cut(s) 857, 2401
HindII GTYRAC 2 cut(s) 857, 2401
HindIII AAGCTT 3 cut(s) 1306, 2146, 2555
HinfI GANTC 7 cut(s) 941, 1003, 1116, 1374, 1627, 1698, 2472
HpaII CCGG 3 cut(s) 396, 684, 1695
HphI GGTGA 3 cut(s) 1152, 2287, 2509
Hpy99I CGWCG 1 cut(s) 890
HpyAV CCTTC 9 cut(s) 68, 166, 893, 1220, 1286, 1428, 1949, 2308, 2315
HpyCH4III ACNGT 4 cut(s) 127, 890, 1616, 2133
HpyCH4IV ACGT 1 cut(s) 987
HpyF10VI GCNNNNNNNGC 3 cut(s) 243, 1314, 2450
HpySE526I ACGT 1 cut(s) 987
HspAI GCGC 1 cut(s) 218
Kpn2I TCCGGA 1 cut(s) 1694
Ksp22I TGATCA 1 cut(s) 1518
LmnI GCTCC 4 cut(s) 727, 1577, 1754, 2091
Lsp1109I GCAGC 6 cut(s) 10, 32, 161, 233, 448, 2377
MaeI CTAG 7 cut(s) 539, 933, 1379, 1389, 1488, 1751, 2178
MaeII ACGT 1 cut(s) 987
MaeIII GTNAC 4 cut(s) 269, 284, 1294, 2036
MfeI CAATTG 2 cut(s) 558, 702
MflI RGATCY 2 cut(s) 205, 1935
MhlI GDGCHC 1 cut(s) 1574
MlsI TGGCCA 2 cut(s) 1288, 1353
MluNI TGGCCA 2 cut(s) 1288, 1353
MlyI GAGTC 3 cut(s) 1125, 1383, 1707
MmeI TCCRAC 9 cut(s) 405, 503, 575, 647, 791, 837, 1099, 1696, 2333
Mox20I TGGCCA 2 cut(s) 1288, 1353
Mph1103I ATGCAT 1 cut(s) 1956
MroI TCCGGA 1 cut(s) 1694
MroXI GAANNNNTTC 6 cut(s) 352, 424, 568, 640, 712, 1469
MscI TGGCCA 2 cut(s) 1288, 1353
MseI TTAA 8 cut(s) 68, 500, 869, 1103, 1199, 1245, 1830, 1964
MslI CAYNNNNRTG 2 cut(s) 1591, 2046
Msp20I TGGCCA 2 cut(s) 1288, 1353
MspA1I CMGCKG 2 cut(s) 23, 2390
MspI CCGG 3 cut(s) 396, 684, 1695
MunI CAATTG 2 cut(s) 558, 702
Mva1269I GAATGC 1 cut(s) 751
MwoI GCNNNNNNNGC 3 cut(s) 243, 1314, 2450
NdeI CATATG 2 cut(s) 1291, 1956
NlaIV GGNNCC 5 cut(s) 1208, 1273, 1756, 1846, 2196
NsiI ATGCAT 1 cut(s) 1956
NspI RCATGY 4 cut(s) 1860, 1900, 2156, 2522
PaeI GCATGC 1 cut(s) 1900
PagI TCATGA 1 cut(s) 1942
PciI ACATGT 2 cut(s) 1856, 2152
PctI GAATGC 1 cut(s) 751
PdmI GAANNNNTTC 6 cut(s) 352, 424, 568, 640, 712, 1469
PfeI GAWTC 4 cut(s) 941, 1003, 1627, 2472
PkrI GCNGC 6 cut(s) 22, 25, 151, 248, 438, 2392
PleI GAGTC 3 cut(s) 1124, 1382, 1706
PpsI GAGTC 3 cut(s) 1124, 1382, 1706
PpuMI RGGWCCY 1 cut(s) 1844
PscI ACATGT 2 cut(s) 1856, 2152
Psp5II RGGWCCY 1 cut(s) 1844
PspN4I GGNNCC 5 cut(s) 1208, 1273, 1756, 1846, 2196
PspPPI RGGWCCY 1 cut(s) 1844
PstNI CAGNNNCTG 2 cut(s) 730, 802
PsuI RGATCY 2 cut(s) 205, 1935
PvuII CAGCTG 2 cut(s) 23, 2390
RsaI GTAC 1 cut(s) 328
RsaNI GTAC 1 cut(s) 327
RseI CAYNNNNRTG 2 cut(s) 1591, 2046
SaqAI TTAA 8 cut(s) 68, 500, 869, 1103, 1199, 1245, 1830, 1964
SatI GCNGC 6 cut(s) 21, 24, 150, 247, 437, 2391
SchI GAGTC 3 cut(s) 1125, 1383, 1707
SduI GDGCHC 1 cut(s) 1574
SmiMI CAYNNNNRTG 2 cut(s) 1591, 2046
SmlI CTYRAG 8 cut(s) 739, 1094, 1109, 1169, 1423, 1459, 1631, 2086
SmoI CTYRAG 8 cut(s) 739, 1094, 1109, 1169, 1423, 1459, 1631, 2086
SphI GCATGC 1 cut(s) 1900
SspI AATATT 3 cut(s) 108, 1483, 1777
SspMI CTAG 7 cut(s) 539, 933, 1379, 1389, 1488, 1751, 2178
StyI CCWWGG 6 cut(s) 513, 538, 585, 657, 1378, 1487
TaaI ACNGT 4 cut(s) 127, 890, 1616, 2133
TaiI ACGT 1 cut(s) 990
TaqI TCGA 6 cut(s) 129, 294, 485, 629, 885, 1559
TfiI GAWTC 4 cut(s) 941, 1003, 1627, 2472
Tru1I TTAA 8 cut(s) 68, 500, 869, 1103, 1199, 1245, 1830, 1964
Tru9I TTAA 8 cut(s) 68, 500, 869, 1103, 1199, 1245, 1830, 1964
TscAI CASTG 4 cut(s) 342, 997, 1074, 2376
TseI GCWGC 6 cut(s) 20, 23, 149, 246, 436, 2390
TspGWI ACGGA 3 cut(s) 1052, 1067, 1231
TspRI CASTG 4 cut(s) 342, 997, 1074, 2376
XapI RAATTY 8 cut(s) 185, 502, 718, 1088, 1122, 1647, 1688, 2242
XbaI TCTAGA 1 cut(s) 1388
XceI RCATGY 4 cut(s) 1860, 1900, 2156, 2522
XcmI CCANNNNNNNNNTGG 2 cut(s) 768, 1590
XmaJI CCTAGG 3 cut(s) 538, 1378, 1487
XmiI GTMKAC 1 cut(s) 544
XmnI GAANNNNTTC 6 cut(s) 352, 424, 568, 640, 712, 1469
XspI CTAG 7 cut(s) 539, 933, 1379, 1389, 1488, 1751, 2178
Zsp2I ATGCAT 1 cut(s) 1956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.