Rorug02G0096300

Rer1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002176
Physical Location & Seq
Reverse (-)
7900496 .. 7904322
3827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0096300.1

Sequence Viewer

Length: 2460 bp
ATGCCTCCCTCCAAAAAATTTACGCTTGCCCTTTTGTTTTGTTTTTCCGTGATTCTTCTCATCTCCTACGCAAGTGCCGTTAAAGTTTCTCATGATGGAAGATCCATCACCATCGATGGCAAACCAAGAATTCTGCTGTCCGGTTCCATTCACTATCCTCGAAGCACACCAGAGATGTGGCCTGACTTGATTAAGAAGTCAAAGGAGGGTGGATTAGACGCAATTGAGACCTATGTGTTCTGGAATGCTCATGAACCAGTGCGTCGCCAATATGATTTTACTGGCAACCTAGACCTCATTAAGTTCATCAAAACCGTTCAAGATGCTGGACTATACGTCGTTCTTCGAATCGGTCCGTATGTTTGTGCTGAATGGAACTATGGAGGACTTCCTGTTTGGCTGCACAATTTGCCCGGCTGCAAAATTCGAACTGCAAATGATGTCTTCATGAATGAGATGAAAAATTTCACTACTATGATTGTTGATATGGCCAAAAAAGAGAAGCTTTTTGCATCTCAAGGAGGCCCAATTATTATGGCTCAGATTGAAAATGAATATGGAGATGTGGAATGGTGGTATGGAGATGCTGGTAAAGCATATCGTGACTGGTGTGCAAATTTTGCTGAATCTCTTGATGTTGGTGTTCCATGGATTATGTGTCAACAAAACGATGCCCCAGATCCAATGATCAACACTTGCAATGGCTTCTACTGCGACCAATTTACACCCAGACCCAATTATCCTAAAATGTGGACTGAAAATTGGACAGGATGGTTTAAGAGCTGGGGCGGCTCAGATCCATTCAGGACCGCTGAGGATCTTGCTTTCGCAGTTGCAAAATTTTTCCAATTTGGAGGCACATTTCAGAACTATTACATGTATCATGGTGGTACAAACTTCGGTCGAACAGCTGCTGGATACATCACCACTTCTTATGATTACAATGCTCCTCTCGATGAATATGGTACTTTGAATCAACCAAAATGGGGGCATTTGAAGCAACTTCATGAGACTTTGAAATCCATGGAGTACACTCTTACCCATGGAAATATTACCACCGCAGATTTGGGTAACTATGTTTCGACCACTGTGTATGCAACAGAAGAGTCGTCGAGTTGCTTTCTGGGCAATTCAAATTACAAACTTGATGCAAACATCACTTTCCGAGGAACCCAATACACTGTTCCGGCGTGGTCTGTTAGTATTCTTCCTGATTGCAAAATTGAAGTATATAATACTGCTAAGGTTAATACCCAAACAACAGTAAAAGTAAAAAGGCCTAACAAGGCTGAAGATGAACCTGAGTCTCTTCAGTGGACATGGAGGCCTGAGAACATAGATGAGACTAAGATTCTTGGAAAAGGTGAAGTTGTGGTAAATCACCTTATGGAGCAAAAAGAGGCTGCAAATGATGATAGTGATTACCTTTGGTACATGACAAGTCTTGATCTCAAGAAAGATGATCCAAGTTGGAGTAAGAACATTACACTAAGGATCAATGGAACTGGTTGCATTCTTCATGCTTATGTGAATGGAGAGCATATTGGTTCTGACAATGCTGCTCGTAATTTTGAGAGAAATGTTACACTAAATTATGGAAGAAACATTATTTCTTTGTTGAGTGTCACAACTGGATTTTCGAACTACGGAGGTGGATATGATTTGCAACCTGCTGGAATACTTGGTCCTATTGTTTTGATTGGACAGAATGGTGACGAAACTGTGATCAAGGATTTGTCAGCACACAAATGGTCATACAAGGTTGGATTACATGGCTTGACAAACAAGCTATTTAGCTCCGAGAAAGCAACGAAATGGTCGTCTGAAAATTTACCAGTAAACACGATGATGACATGGTACAAGACAACTTTCAAAGCTCCTTTAGGAACTGACCCCGTTGTGGTGGATTTACAAGGGTTGGGGAAGGGTGATGCTTGGGTGAATGGTCATAGTATTGGTCGATATTGGCCAAGTTATTTGGCTAAGACCGACGGTTGTAGTGATGCTTGCGACTATCGTGGTAAATATGAGAGTAAAAAATGTACTTCCAAATGTGGCGAACCTACTCAAAGATGGTATCATGTTCCGCGATCTTTCATGCGAGACGATGATGAGAACACGTTGATCTTGTTCGAAGAATTTGGTGGCAATCCATCTCTTGTAAATTTCCAAACCATCACAGTCGGAAGTGTTTGTGCGAATTCATATGAGAAGAATACCTTGGAATTGGCATGCCAAGGTCGCCCCATTTCAGCAATCAAATTTGCTAGCTTTGGCAACCCTCAAGGTACTTGTGGATCATTCAAGAAAGGCACCTGTGATGGCGCAAATGCACTGTCCATCATTGAAAAGGAATGCATCGGTAAAGAAAAATGCTCGATCAACATCTCCAAAGACAAATTTGACACAACAAATTGTGGAGATAATGTGAAAAGGCTTGCAGTGGAGGCCGTTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006890 GO:0008150 GO:0016192 GO:0048193 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rer1

Protein Analysis

819

Amino Acids

91.75

Weight (kDa)

5.99

Isoelectric Point (pI)

33.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 35 - 338 9.3e-119 Glycosyl hydrolases family 35
Glyco_hydro_42 PF02449 57 - 206 3e-07 Beta-galactosidase
GHD PF17834 362 - 416 2.1e-22 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 617 - 702 3.3e-23 Beta-galactosidase, galactose-binding domain
SUEL_Lectin PF02140 744 - 819 1.3e-17 D-galactoside/L-rhamnose binding SUEL lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1678
AccB1I GGYRCC 1 cut(s) 2312
AccII CGCG 1 cut(s) 2089
AciI CCGC 4 cut(s) 789, 810, 1059, 2087
AclWI GGATC 7 cut(s) 96, 674, 791, 825, 1457, 1502, 2305
AcoI YGGCCR 2 cut(s) 489, 1967
AcuI CTGAAG 2 cut(s) 1295, 1311
AfaI GTAC 7 cut(s) 892, 967, 1031, 1433, 1859, 2044, 2290
AfiI CCNNNNNNNGG 2 cut(s) 986, 1900
AflIII ACRYGT 2 cut(s) 876, 2118
AhdI GACNNNNNGTC 1 cut(s) 335
AjuI GAANNNNNNNTTGG 4 cut(s) 1167, 1199, 2204, 2236
AluBI AGCT 7 cut(s) 505, 783, 911, 1789, 1797, 1877, 2271
AluI AGCT 7 cut(s) 505, 783, 911, 1789, 1797, 1877, 2271
Alw26I GTCTC 5 cut(s) 221, 1004, 1311, 1337, 2097
AlwI GGATC 7 cut(s) 96, 674, 791, 825, 1457, 1502, 2305
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 7 cut(s) 179, 489, 523, 1277, 1325, 1967, 2448
ApeKI GCWGC 5 cut(s) 400, 417, 911, 1403, 1559
ArsI GACNNNNNNTTYG 6 cut(s) 378, 410, 1805, 1837, 2321, 2353
Asp700I GAANNNNTTC 1 cut(s) 464
AspLEI GCGC 1 cut(s) 2327
AspS9I GGNCC 4 cut(s) 353, 524, 807, 1685
AsuC2I CCSGG 1 cut(s) 414
AsuHPI GGTGA 7 cut(s) 100, 916, 1373, 1376, 1724, 1940, 1951
AsuII TTCGAA 4 cut(s) 346, 427, 1640, 2133
AsuNHI GCTAGC 1 cut(s) 2267
AvaII GGWCC 3 cut(s) 353, 807, 1685
BalI TGGCCA 2 cut(s) 491, 1969
BanI GGYRCC 1 cut(s) 2312
BbsI GAAGAC 1 cut(s) 436
BbvCI CCTCAGC 1 cut(s) 813
BbvI GCAGC 5 cut(s) 387, 404, 898, 1390, 1546
BceAI ACGGC 2 cut(s) 62, 2435
BciVI GTATCC 1 cut(s) 911
BclI TGATCA 2 cut(s) 687, 1725
BcnI CCSGG 1 cut(s) 414
BcoDI GTCTC 5 cut(s) 221, 1004, 1311, 1337, 2097
BfaI CTAG 2 cut(s) 290, 2268
BfuAI ACCTGC 1 cut(s) 1678
BfuI GTATCC 1 cut(s) 911
BisI GCNGC 6 cut(s) 401, 418, 790, 912, 1404, 1560
BlsI GCNGC 6 cut(s) 402, 419, 791, 913, 1405, 1561
Bme1390I CCNGG 1 cut(s) 414
Bme18I GGWCC 3 cut(s) 353, 807, 1685
BmeRI GACNNNNNGTC 1 cut(s) 335
BmgT120I GGNCC 4 cut(s) 353, 524, 807, 1685
BmiI GGNNCC 3 cut(s) 145, 1171, 2314
BmrFI CCNGG 1 cut(s) 414
BmsI GCATC 8 cut(s) 313, 521, 574, 661, 1138, 1921, 1993, 2367
BmtI GCTAGC 1 cut(s) 2271
BpiI GAAGAC 1 cut(s) 436
Bpu10I CCTNAGC 2 cut(s) 813, 1242
Bpu14I TTCGAA 4 cut(s) 346, 427, 1640, 2133
BpuEI CTTGAG 3 cut(s) 501, 1436, 2268
BpuMI CCSGG 1 cut(s) 414
Bsa29I ATCGAT 1 cut(s) 114
BsaBI GATNNNNATC 1 cut(s) 2384
BsaI GGTCTC 1 cut(s) 221
BsaJI CCNNGG 6 cut(s) 647, 1023, 1042, 1165, 2220, 2236
BsaWI WCCGGW 1 cut(s) 140
BsaXI ACNNNNNCTCC 2 cut(s) 2412, 2442
Bsc4I CCNNNNNNNGG 2 cut(s) 986, 1900
Bse1I ACTGG 6 cut(s) 257, 286, 611, 1510, 1636, 1835
Bse3DI GCAATG 1 cut(s) 706
Bse8I GATNNNNATC 1 cut(s) 2384
BseCI ATCGAT 1 cut(s) 114
BseDI CCNNGG 6 cut(s) 647, 1023, 1042, 1165, 2220, 2236
BseGI GGATG 1 cut(s) 776
BseJI GATNNNNATC 1 cut(s) 2384
BseLI CCNNNNNNNGG 2 cut(s) 986, 1900
BseMI GCAATG 1 cut(s) 706
BseMII CTCAG 5 cut(s) 554, 804, 807, 1293, 1320
BseNI ACTGG 6 cut(s) 257, 286, 611, 1510, 1636, 1835
BseRI GAGGAG 1 cut(s) 939
BseXI GCAGC 5 cut(s) 387, 404, 898, 1390, 1546
BseYI CCCAGC 1 cut(s) 783
BsgI GTGCAG 1 cut(s) 386
Bsh1236I CGCG 1 cut(s) 2089
Bsh1285I CGRYCG 1 cut(s) 904
BshFI GGCC 7 cut(s) 181, 491, 525, 1279, 1327, 1969, 2450
BshNI GGYRCC 1 cut(s) 2312
BshVI ATCGAT 1 cut(s) 114
BsiEI CGRYCG 1 cut(s) 904
BsiSI CCGG 3 cut(s) 141, 414, 1187
BslI CCNNNNNNNGG 2 cut(s) 986, 1900
BsmAI GTCTC 5 cut(s) 221, 1004, 1311, 1337, 2097
BsmBI CGTCTC 1 cut(s) 2097
BsmI GAATGC 3 cut(s) 250, 1512, 2360
BsnI GGCC 7 cut(s) 181, 491, 525, 1279, 1327, 1969, 2450
Bso31I GGTCTC 1 cut(s) 221
Bsp119I TTCGAA 4 cut(s) 346, 427, 1640, 2133
Bsp19I CCATGG 3 cut(s) 647, 1023, 1042
BspACI CCGC 4 cut(s) 789, 810, 1059, 2087
BspANI GGCC 7 cut(s) 181, 491, 525, 1279, 1327, 1969, 2450
BspCNI CTCAG 5 cut(s) 553, 805, 806, 1294, 1321
BspDI ATCGAT 1 cut(s) 114
BspFNI CGCG 1 cut(s) 2089
BspHI TCATGA 4 cut(s) 91, 250, 447, 1006
BspLI GGNNCC 3 cut(s) 145, 1171, 2314
BspMI ACCTGC 1 cut(s) 1678
BspOI GCTAGC 1 cut(s) 2271
BspPI GGATC 7 cut(s) 96, 674, 791, 825, 1457, 1502, 2305
BspT104I TTCGAA 4 cut(s) 346, 427, 1640, 2133
BspT107I GGYRCC 1 cut(s) 2312
BspTNI GGTCTC 1 cut(s) 221
BsrDI GCAATG 1 cut(s) 706
BsrI ACTGG 6 cut(s) 257, 286, 611, 1510, 1636, 1835
BssECI CCNNGG 6 cut(s) 647, 1023, 1042, 1165, 2220, 2236
BssT1I CCWWGG 5 cut(s) 647, 1023, 1042, 2220, 2236
Bst4CI ACNGT 8 cut(s) 316, 1090, 1183, 1264, 1723, 1994, 2182, 2337
Bst6I CTCTTC 2 cut(s) 1098, 1314
BstAPI GCANNNNNTGC 2 cut(s) 409, 620
BstBI TTCGAA 4 cut(s) 346, 427, 1640, 2133
BstC8I GCNNGC 5 cut(s) 27, 2008, 2233, 2269, 2439
BstDEI CTNAG 9 cut(s) 540, 793, 813, 1242, 1302, 1329, 1347, 1490, 1983
BstDSI CCRYGG 3 cut(s) 647, 1023, 1042
BstF5I GGATG 1 cut(s) 776
BstFNI CGCG 1 cut(s) 2089
BstHHI GCGC 1 cut(s) 2327
BstMAI GTCTC 5 cut(s) 221, 1004, 1311, 1337, 2097
BstMCI CGRYCG 1 cut(s) 904
BstMWI GCNNNNNNNGC 9 cut(s) 409, 593, 620, 711, 789, 997, 1125, 2241, 2447
BstNSI RCATGY 2 cut(s) 880, 2235
BstSCI CCNGG 1 cut(s) 412
BstUI CGCG 1 cut(s) 2089
BstV1I GCAGC 5 cut(s) 387, 404, 898, 1390, 1546
BstV2I GAAGAC 1 cut(s) 436
BstX2I RGATCY 4 cut(s) 101, 679, 796, 817
BstXI CCANNNNNNTGG 1 cut(s) 177
BstYI RGATCY 4 cut(s) 101, 679, 796, 817
Bsu15I ATCGAT 1 cut(s) 114
BsuI GTATCC 1 cut(s) 911
BsuRI GGCC 7 cut(s) 181, 491, 525, 1279, 1327, 1969, 2450
BsuTUI ATCGAT 1 cut(s) 114
BtgI CCRYGG 3 cut(s) 647, 1023, 1042
BtsCI GGATG 1 cut(s) 776
BtsI GCAGTG 1 cut(s) 2448
BtsIMutI CAGTG 6 cut(s) 264, 1086, 1179, 1319, 2333, 2448
BveI ACCTGC 1 cut(s) 1678
Cac8I GCNNGC 5 cut(s) 27, 2008, 2233, 2269, 2439
CaiI CAGNNNCTG 1 cut(s) 914
CciI TCATGA 4 cut(s) 91, 250, 447, 1006
CfoI GCGC 1 cut(s) 2327
Cfr13I GGNCC 4 cut(s) 353, 524, 807, 1685
ClaI ATCGAT 1 cut(s) 114
CpoI CGGWCCG 1 cut(s) 353
CseI GACGC 2 cut(s) 227, 251
Csp6I GTAC 7 cut(s) 891, 966, 1030, 1432, 1858, 2043, 2289
CspI CGGWCCG 1 cut(s) 353
CviQI GTAC 7 cut(s) 891, 966, 1030, 1432, 1858, 2043, 2289
DdeI CTNAG 9 cut(s) 540, 793, 813, 1242, 1302, 1329, 1347, 1490, 1983
DriI GACNNNNNGTC 1 cut(s) 335
EaeI YGGCCR 2 cut(s) 489, 1967
Eam1104I CTCTTC 2 cut(s) 1098, 1314
Eam1105I GACNNNNNGTC 1 cut(s) 335
EarI CTCTTC 2 cut(s) 1098, 1314
Eco130I CCWWGG 5 cut(s) 647, 1023, 1042, 2220, 2236
Eco147I AGGCCT 2 cut(s) 1279, 1327
Eco31I GGTCTC 1 cut(s) 221
Eco47I GGWCC 3 cut(s) 353, 807, 1685
Eco57I CTGAAG 2 cut(s) 1295, 1311
EcoRI GAATTC 2 cut(s) 129, 2200
EcoT14I CCWWGG 5 cut(s) 647, 1023, 1042, 2220, 2236
EcoT22I ATGCAT 1 cut(s) 2360
ErhI CCWWGG 5 cut(s) 647, 1023, 1042, 2220, 2236
Esp3I CGTCTC 1 cut(s) 2097
FalI AAGNNNNNCTT 4 cut(s) 489, 521, 2204, 2236
FauNDI CATATG 1 cut(s) 2206
FbaI TGATCA 2 cut(s) 687, 1725
Fnu4HI GCNGC 6 cut(s) 401, 418, 790, 912, 1404, 1560
FokI GGATG 1 cut(s) 783
Fsp4HI GCNGC 6 cut(s) 401, 418, 790, 912, 1404, 1560
FspBI CTAG 2 cut(s) 290, 2268
GlaI GCGC 1 cut(s) 2326
GluI GCNGC 6 cut(s) 401, 418, 790, 912, 1404, 1560
GsaI CCCAGC 1 cut(s) 787
HaeIII GGCC 7 cut(s) 181, 491, 525, 1279, 1327, 1969, 2450
HapII CCGG 3 cut(s) 141, 414, 1187
HgaI GACGC 2 cut(s) 227, 251
HhaI GCGC 1 cut(s) 2327
Hin6I GCGC 1 cut(s) 2325
HinP1I GCGC 1 cut(s) 2325
HincII GTYRAC 1 cut(s) 662
HindII GTYRAC 1 cut(s) 662
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 7 cut(s) 52, 348, 626, 973, 1106, 1304, 1351
HpaII CCGG 3 cut(s) 141, 414, 1187
HphI GGTGA 7 cut(s) 100, 916, 1373, 1376, 1724, 1940, 1951
Hpy166II GTNNAC 5 cut(s) 662, 753, 1032, 1317, 1840
Hpy188I TCNGA 8 cut(s) 543, 796, 867, 1166, 1552, 1801, 1825, 2186
Hpy8I GTNNAC 5 cut(s) 662, 753, 1032, 1317, 1840
Hpy99I CGWCG 4 cut(s) 267, 341, 1114, 1994
HpyAV CCTTC 1 cut(s) 1918
HpyCH4III ACNGT 8 cut(s) 316, 1090, 1183, 1264, 1723, 1994, 2182, 2337
HpyCH4IV ACGT 2 cut(s) 336, 2120
HpyF10VI GCNNNNNNNGC 9 cut(s) 409, 593, 620, 711, 789, 997, 1125, 2241, 2447
HpyF3I CTNAG 9 cut(s) 540, 793, 813, 1242, 1302, 1329, 1347, 1490, 1983
HpySE526I ACGT 2 cut(s) 336, 2120
HspAI GCGC 1 cut(s) 2325
Ksp22I TGATCA 2 cut(s) 687, 1725
LmnI GCTCC 4 cut(s) 952, 1390, 1802, 1882
Lsp1109I GCAGC 5 cut(s) 387, 404, 898, 1390, 1546
LweI GCATC 8 cut(s) 313, 521, 574, 661, 1138, 1921, 1993, 2367
MaeI CTAG 2 cut(s) 290, 2268
MaeII ACGT 2 cut(s) 336, 2120
MaeIII GTNAC 5 cut(s) 602, 1070, 1582, 1624, 1712
MfeI CAATTG 1 cut(s) 222
MflI RGATCY 4 cut(s) 101, 679, 796, 817
MlsI TGGCCA 2 cut(s) 491, 1969
MluNI TGGCCA 2 cut(s) 491, 1969
MlyI GAGTC 2 cut(s) 1115, 1313
MmeI TCCRAC 3 cut(s) 1451, 1744, 2164
Mox20I TGGCCA 2 cut(s) 491, 1969
Mph1103I ATGCAT 1 cut(s) 2360
MroXI GAANNNNTTC 1 cut(s) 464
MscI TGGCCA 2 cut(s) 491, 1969
MseI TTAA 6 cut(s) 81, 192, 300, 777, 1248, 2458
MslI CAYNNNNRTG 4 cut(s) 473, 1524, 1747, 1847
Msp20I TGGCCA 2 cut(s) 491, 1969
MspA1I CMGCKG 2 cut(s) 812, 911
MspI CCGG 3 cut(s) 141, 414, 1187
MspR9I CCNGG 1 cut(s) 414
MunI CAATTG 1 cut(s) 222
Mva1269I GAATGC 3 cut(s) 250, 1512, 2360
MvnI CGCG 1 cut(s) 2089
MwoI GCNNNNNNNGC 9 cut(s) 409, 593, 620, 711, 789, 997, 1125, 2241, 2447
NciI CCSGG 1 cut(s) 414
NcoI CCATGG 3 cut(s) 647, 1023, 1042
NdeI CATATG 1 cut(s) 2206
NheI GCTAGC 1 cut(s) 2267
NlaIV GGNNCC 3 cut(s) 145, 1171, 2314
NmuCI GTSAC 3 cut(s) 602, 1624, 1712
NsiI ATGCAT 1 cut(s) 2360
NspI RCATGY 2 cut(s) 880, 2235
NspV TTCGAA 4 cut(s) 346, 427, 1640, 2133
PaeI GCATGC 1 cut(s) 2235
PagI TCATGA 4 cut(s) 91, 250, 447, 1006
PceI AGGCCT 2 cut(s) 1279, 1327
PciI ACATGT 1 cut(s) 876
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 1817
PctI GAATGC 3 cut(s) 250, 1512, 2360
PdmI GAANNNNTTC 1 cut(s) 464
PfeI GAWTC 5 cut(s) 52, 348, 626, 973, 1351
PkrI GCNGC 6 cut(s) 402, 419, 791, 913, 1405, 1561
PleI GAGTC 2 cut(s) 1114, 1312
PpsI GAGTC 2 cut(s) 1114, 1312
PscI ACATGT 1 cut(s) 876
PspFI CCCAGC 1 cut(s) 783
PspN4I GGNNCC 3 cut(s) 145, 1171, 2314
PspPI GGNCC 4 cut(s) 353, 524, 807, 1685
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 4 cut(s) 101, 679, 796, 817
PvuII CAGCTG 1 cut(s) 911
RsaI GTAC 7 cut(s) 892, 967, 1031, 1433, 1859, 2044, 2290
RsaNI GTAC 7 cut(s) 891, 966, 1030, 1432, 1858, 2043, 2289
RseI CAYNNNNRTG 4 cut(s) 473, 1524, 1747, 1847
Rsr2I CGGWCCG 1 cut(s) 353
RsrII CGGWCCG 1 cut(s) 353
SaqAI TTAA 6 cut(s) 81, 192, 300, 777, 1248, 2458
SatI GCNGC 6 cut(s) 401, 418, 790, 912, 1404, 1560
Sau96I GGNCC 4 cut(s) 353, 524, 807, 1685
SchI GAGTC 2 cut(s) 1115, 1313
ScrFI CCNGG 1 cut(s) 414
SfaNI GCATC 8 cut(s) 313, 521, 574, 661, 1138, 1921, 1993, 2367
SfuI TTCGAA 4 cut(s) 346, 427, 1640, 2133
SinI GGWCC 3 cut(s) 353, 807, 1685
SmiMI CAYNNNNRTG 4 cut(s) 473, 1524, 1747, 1847
SmlI CTYRAG 3 cut(s) 516, 1451, 2283
SmoI CTYRAG 3 cut(s) 516, 1451, 2283
SphI GCATGC 1 cut(s) 2235
SseBI AGGCCT 2 cut(s) 1279, 1327
SsiI CCGC 4 cut(s) 789, 810, 1059, 2087
SspI AATATT 1 cut(s) 1051
SspMI CTAG 2 cut(s) 290, 2268
StuI AGGCCT 2 cut(s) 1279, 1327
StyD4I CCNGG 1 cut(s) 412
StyI CCWWGG 5 cut(s) 647, 1023, 1042, 2220, 2236
TaaI ACNGT 8 cut(s) 316, 1090, 1183, 1264, 1723, 1994, 2182, 2337
TaiI ACGT 2 cut(s) 339, 2123
TaqII GACCGA 3 cut(s) 341, 890, 2003
TatI WGTACW 2 cut(s) 1029, 2042
TauI GCSGC 1 cut(s) 792
TfiI GAWTC 5 cut(s) 52, 348, 626, 973, 1351
Tru1I TTAA 6 cut(s) 81, 192, 300, 777, 1248, 2458
Tru9I TTAA 6 cut(s) 81, 192, 300, 777, 1248, 2458
TscAI CASTG 6 cut(s) 264, 1093, 1186, 1319, 2340, 2448
TseFI GTSAC 3 cut(s) 602, 1624, 1712
TseI GCWGC 5 cut(s) 400, 417, 911, 1403, 1559
Tsp45I GTSAC 3 cut(s) 602, 1624, 1712
TspGWI ACGGA 3 cut(s) 37, 345, 1662
TspRI CASTG 6 cut(s) 264, 1093, 1186, 1319, 2340, 2448
VpaK11BI GGWCC 3 cut(s) 353, 807, 1685
XceI RCATGY 2 cut(s) 880, 2235
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XmnI GAANNNNTTC 1 cut(s) 464
XspI CTAG 2 cut(s) 290, 2268
Zsp2I ATGCAT 1 cut(s) 2360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.