Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002565

Physical Location & Seq

Genomic Coordinates Reverse (-)

21952632 .. 21955727

Gene Structure 3096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0225100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGAAGTTAAGAAAATGCTAGGGCTCCTCTTAGGGATCTTCTTCCTCGATGGGCTGTTCCTCCTCTCCGCGGCTTCAAACGTCCACCACTACAGCTTTATACTGAAGGAGACGAACTTTACAAGACTATGTTTCGAAAAGCCGATGCTCACTGTAAATGAGCAGTTCCCAGGACCAACTATTCATGTTCGCAAAGGAGATACTGCTTTTGTTAATGTTCACAATGATGGCAAATATGGTATCACCATTCACTGGCATGGAGTGAAGCAACCAAATAATCCATGGTCAGATGGTCCAGAAAACATCACTCAGTGCCCGATTCAGCCTGGAAAAAACTTCACTTATGAGGTCATATTTTCAGATGAAGAAGGCACCCTATGGTGGCATGCGCATAGTGACTGGTCACGTGCTACAGTCCATGGTCACATCGTTATCTTACCTGAGATAGGAAAGACTTATCCATTTCCCGAACCTTACGCTGAGCAAACAATTTTTCTTGCATCGTGGTTCAATACTGATGTGAAGGAACTAATTGATGACGCCACACTAATTGGAGGTGACCCAGACCCATCGGATGGATTCACCATCAACGGCTGGCCAGGAGCTTTATACAATTGCTCCAATGAAACCATATCCACTTTTGGAGTTGAATACGGCAAGACCTATCTTTTTCGTCTAGTGAACGGTGTGATGAACGAAGAAATGTTCTTTGGAATTGCCGGACACAACTTCACCATGGTAGCTCAAGACGCAGCATACATCAAGCCCATAGTAACAAGCTACATAATGATAACTCCCGGCCAAACCATGGACATTCTACTAACAGCAGACCAGTCTCCAAGTTCCTACTACATTGCAGCCAGCCCATTCTTTGACTCAAACGCTCCATTCGACAATACCACCACCACAGCTATTCTCCAGTACACAAACGGAACCGCCCCATCGTCTATTCCTTTTCCTTCACTTCCTTCGACGACCGACAAAGAATCTGCAGATAACTTCACAAGCAAGATAAAGGCTTTGGCAAGCGAGGAACATCCGATTAGTGTGCCTCAAAATATTACCAAAAGAATCTTCATCACAGTTTCCGTGAATCAGCTACCTTGTGATCTTGTTAATGGCACTTGTGGGGGTCCTAATGGTAATAGGCTGGCTGCTAGCTTGAACAATATCAGTTTCTCTACCCCCACTACTGATATACTGCAACAATACTACAGCATGTTGAATGATACTAGCTTTGACACCGATTTTCCTAGTCAACCAGCTGTGTTATTCAACTTCACAGGGGATGATGCAGACGATTATATACTGCCAGAAGTAGGGACGAAGGCGAAATTGGTTGGGTACGGGGCATCGGTTGAAATTGTGTACCAAGGGACTAATATTGGGAATGCAGAAAACCATCCGATGCATTTGCATGGTTATAGCTTCTATGTCGTCGGCTCAGCTTATGGCAATTGGAATGAGACCACTTCTCTAGACACTTACAACTTGATAGATCCACCGGAAGTCAACACCATCGGAGTTCCTAAGAATGGATGGACTTCCATTCGATTCGTTGCTAACAATCCTGGAGTGTGGTTTATGCATTGTCATTTGGAACGTCATGCTAGTTGGGGCATGAACACGGTACTTATTGTGAAGAATGGACCCACCAATGATACCAAGATCCGACGACCCCCTCCAAACTTGCCAATCTGTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

Alba

Protein Analysis

568

Amino Acids

62.82

Weight (kDa)

5.0

Isoelectric Point (pI)

34.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	36 - 147	2.6e-39	Multicopper oxidase
Cu-oxidase	PF00394	162 - 310	6.3e-38	Multicopper oxidase
Cu-oxidase_2	PF07731	417 - 549	7.7e-37	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002565)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76010 AT1G76010
fragaria_vesca	FvH4_1g23910 FvH4_1g23910 FvH4_1g23910 FvH4_2g13290
malus_domestica	MD01G1009700.v1.1 MD15G1340000.v1.1
prunus_persica	Prupe.6G161100_v2.0.a1 Prupe.6G161100_v2.0.a1 Prupe.8G036600_v2.0.a1 Prupe.8G036600_v2.0.a1
pyrus_communis	pycom01g03580 pycom15g29980
rosa_chinensis	RchiOBHm_Chr2g0119911 RchiOBHm_Chr6g0274731
rosa_laevigata	RLG00000013527 RLG00000018500
rosa_multiflora	Rmu_co8425251.1_g000001 Rmu_sc0006223.1_g000010 Rmu_sc0013532.1_g000003
rosa_roxburghii	Rroxscaffold_7G00193990
rosa_rugosa	Rorug02G0225000 Rorug02G0225100 Rorug02G0225200 Rorug02G0225200 Rorug02G0225300 Rorug06G0083200 Rorug06G0083300 Rorug06G0083400 Rorug06G0083500
rosa_samantha	Rh2AG282400 Rh2BG293800 Rh2DG307600 Rh6AG199300 Rh6BG203100 Rh6CG203300 Rh6DG194900
rosa_wichuraiana	Rw2G022540 Rw6G017330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	371
AccB7I	CCANNNNNTGG	3 cut(s)	252, 575, 808
AccII	CGCG	1 cut(s)	71
AciI	CCGC	3 cut(s)	69, 71, 936
AclWI	GGATC	3 cut(s)	44, 1493, 1663
AcoI	YGGCCR	2 cut(s)	596, 799
AcuI	CTGAAG	1 cut(s)	125
AcvI	CACGTG	1 cut(s)	407
AcyI	GRCGYC	1 cut(s)	540
AdeI	CACNNNGTG	1 cut(s)	312
AfaI	GTAC	4 cut(s)	923, 1346, 1370, 1632
AfiI	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
AgsI	TTSAA	7 cut(s)	78, 511, 650, 1165, 1225, 1276, 1361
AjnI	CCWGG	4 cut(s)	169, 325, 598, 1570
AjuI	GAANNNNNNNTTGG	6 cut(s)	693, 725, 1058, 1090, 1319, 1351
Alw26I	GTCTC	3 cut(s)	104, 840, 1460
AlwI	GGATC	3 cut(s)	44, 1493, 1663
AoxI	GGCC	2 cut(s)	596, 799
ApeKI	GCWGC	3 cut(s)	752, 857, 1154
AspLEI	GCGC	1 cut(s)	391
AspS9I	GGNCC	4 cut(s)	173, 293, 1133, 1649
AsuC2I	CCSGG	1 cut(s)	798
AsuHPI	GGTGA	4 cut(s)	235, 569, 574, 724
AsuII	TTCGAA	1 cut(s)	135
AsuNHI	GCTAGC	1 cut(s)	1157
AvaII	GGWCC	4 cut(s)	173, 293, 1133, 1649
BaeGI	GKGCMC	1 cut(s)	317
BalI	TGGCCA	1 cut(s)	598
BanI	GGYRCC	1 cut(s)	371
BanII	GRGCYC	1 cut(s)	27
BbrPI	CACGTG	1 cut(s)	407
BbvI	GCAGC	3 cut(s)	764, 869, 1141
BceAI	ACGGC	2 cut(s)	607, 670
BcgI	CGANNNNNNTGC	4 cut(s)	1030, 1064, 1396, 1430
BciT130I	CCWGG	4 cut(s)	171, 327, 600, 1572
BcnI	CCSGG	1 cut(s)	798
BcoDI	GTCTC	3 cut(s)	104, 840, 1460
BfaI	CTAG	8 cut(s)	20, 677, 1158, 1233, 1254, 1478, 1611, 1705
BfmI	CTRYAG	4 cut(s)	91, 411, 990, 1213
BisI	GCNGC	4 cut(s)	72, 753, 858, 1155
BlpI	GCTNAGC	2 cut(s)	480, 1444
BlsI	GCNGC	4 cut(s)	73, 754, 859, 1156
Bme1390I	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
Bme18I	GGWCC	4 cut(s)	173, 293, 1133, 1649
BmgT120I	GGNCC	4 cut(s)	173, 293, 1133, 1649
BmiI	GGNNCC	5 cut(s)	26, 373, 934, 1134, 1651
BmrFI	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
BmsI	GCATC	5 cut(s)	135, 509, 1282, 1361, 1398
BmtI	GCTAGC	1 cut(s)	1161
BpmI	CTGGAG	2 cut(s)	902, 1593
Bpu1102I	GCTNAGC	2 cut(s)	480, 1444
Bpu14I	TTCGAA	1 cut(s)	135
BpuEI	CTTGAG	1 cut(s)	729
BpuMI	CCSGG	1 cut(s)	798
BsaAI	YACGTR	1 cut(s)	407
BsaHI	GRCGYC	1 cut(s)	540
BsaI	GGTCTC	1 cut(s)	1460
BsaJI	CCNNGG	7 cut(s)	69, 169, 281, 418, 735, 807, 1372
BsaWI	WCCGGW	1 cut(s)	1504
BsaXI	ACNNNNNCTCC	2 cut(s)	602, 632
Bsc4I	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
Bse1I	ACTGG	4 cut(s)	257, 404, 832, 919
Bse3DI	GCAATG	1 cut(s)	852
BseBI	CCWGG	4 cut(s)	171, 327, 600, 1572
BseDI	CCNNGG	7 cut(s)	69, 169, 281, 418, 735, 807, 1372
BseGI	GGATG	5 cut(s)	580, 1036, 1294, 1402, 1544
BseLI	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	4 cut(s)	323, 432, 471, 1458
BseNI	ACTGG	4 cut(s)	257, 404, 832, 919
BseRI	GAGGAG	2 cut(s)	17, 53
BseSI	GKGCMC	1 cut(s)	317
BseXI	GCAGC	3 cut(s)	764, 869, 1141
Bsh1236I	CGCG	1 cut(s)	71
Bsh1285I	CGRYCG	1 cut(s)	978
BshFI	GGCC	2 cut(s)	598, 801
BshNI	GGYRCC	1 cut(s)	371
BsiEI	CGRYCG	1 cut(s)	978
BsiSI	CCGG	3 cut(s)	720, 798, 1505
BslFI	GGGAC	2 cut(s)	1336, 1390
BslI	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
BsmAI	GTCTC	3 cut(s)	104, 840, 1460
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	2 cut(s)	1336, 1390
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	2 cut(s)	598, 801
Bso31I	GGTCTC	1 cut(s)	1460
Bsp119I	TTCGAA	1 cut(s)	135
Bsp1286I	GDGCHC	2 cut(s)	27, 317
Bsp143I	GATC	4 cut(s)	36, 1108, 1498, 1668
Bsp1720I	GCTNAGC	2 cut(s)	480, 1444
Bsp19I	CCATGG	4 cut(s)	281, 418, 735, 807
BspACI	CCGC	3 cut(s)	69, 71, 936
BspANI	GGCC	2 cut(s)	598, 801
BspCNI	CTCAG	4 cut(s)	322, 433, 472, 1457
BspFNI	CGCG	1 cut(s)	71
BspLI	GGNNCC	5 cut(s)	26, 373, 934, 1134, 1651
BspMAI	CTGCAG	1 cut(s)	994
BspOI	GCTAGC	1 cut(s)	1161
BspPI	GGATC	3 cut(s)	44, 1493, 1663
BspT104I	TTCGAA	1 cut(s)	135
BspT107I	GGYRCC	1 cut(s)	371
BspTNI	GGTCTC	1 cut(s)	1460
BsrDI	GCAATG	1 cut(s)	852
BsrI	ACTGG	4 cut(s)	257, 404, 832, 919
BssECI	CCNNGG	7 cut(s)	69, 169, 281, 418, 735, 807, 1372
BssMI	GATC	4 cut(s)	36, 1108, 1498, 1668
BssNI	GRCGYC	1 cut(s)	540
BssT1I	CCWWGG	5 cut(s)	281, 418, 735, 807, 1372
Bst2UI	CCWGG	4 cut(s)	171, 327, 600, 1572
Bst4CI	ACNGT	5 cut(s)	154, 415, 686, 1084, 1630
BstACI	GRCGYC	1 cut(s)	540
BstBAI	YACGTR	1 cut(s)	407
BstBI	TTCGAA	1 cut(s)	135
BstC8I	GCNNGC	6 cut(s)	387, 596, 862, 1027, 1152, 1159
BstDEI	CTNAG	6 cut(s)	31, 309, 441, 480, 1444, 1530
BstDSI	CCRYGG	5 cut(s)	69, 281, 418, 735, 807
BstEII	GGTNACC	1 cut(s)	557
BstENI	CCTNNNNNAGG	1 cut(s)	444
BstF5I	GGATG	5 cut(s)	580, 1036, 1294, 1402, 1544
BstFNI	CGCG	1 cut(s)	71
BstHHI	GCGC	1 cut(s)	391
BstKTI	GATC	4 cut(s)	39, 1111, 1501, 1671
BstMAI	GTCTC	3 cut(s)	104, 840, 1460
BstMBI	GATC	4 cut(s)	36, 1108, 1498, 1668
BstMCI	CGRYCG	1 cut(s)	978
BstMWI	GCNNNNNNNGC	1 cut(s)	749
BstNI	CCWGG	4 cut(s)	171, 327, 600, 1572
BstNSI	RCATGY	2 cut(s)	389, 1222
BstPI	GGTNACC	1 cut(s)	557
BstSCI	CCNGG	5 cut(s)	169, 325, 598, 796, 1570
BstSFI	CTRYAG	4 cut(s)	91, 411, 990, 1213
BstSLI	GKGCMC	1 cut(s)	317
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	3 cut(s)	764, 869, 1141
BstX2I	RGATCY	3 cut(s)	36, 1498, 1668
BstYI	RGATCY	3 cut(s)	36, 1498, 1668
BsuRI	GGCC	2 cut(s)	598, 801
BtgI	CCRYGG	5 cut(s)	69, 281, 418, 735, 807
BtsCI	GGATG	5 cut(s)	580, 1036, 1294, 1402, 1544
BtsIMutI	CAGTG	3 cut(s)	150, 250, 317
Cac8I	GCNNGC	6 cut(s)	387, 596, 862, 1027, 1152, 1159
CfoI	GCGC	1 cut(s)	391
Cfr13I	GGNCC	4 cut(s)	173, 293, 1133, 1649
Cfr42I	CCGCGG	1 cut(s)	72
CseI	GACGC	2 cut(s)	548, 758
Csp6I	GTAC	4 cut(s)	922, 1345, 1369, 1631
CspCI	CAANNNNNGTGG	2 cut(s)	532, 567
CviQI	GTAC	4 cut(s)	922, 1345, 1369, 1631
DdeI	CTNAG	6 cut(s)	31, 309, 441, 480, 1444, 1530
DpnI	GATC	4 cut(s)	38, 1110, 1500, 1670
DpnII	GATC	4 cut(s)	36, 1108, 1498, 1668
DraIII	CACNNNGTG	1 cut(s)	312
EaeI	YGGCCR	2 cut(s)	596, 799
Eco130I	CCWWGG	5 cut(s)	281, 418, 735, 807, 1372
Eco24I	GRGCYC	1 cut(s)	27
Eco31I	GGTCTC	1 cut(s)	1460
Eco47I	GGWCC	4 cut(s)	173, 293, 1133, 1649
Eco57I	CTGAAG	1 cut(s)	125
Eco72I	CACGTG	1 cut(s)	407
Eco91I	GGTNACC	1 cut(s)	557
EcoNI	CCTNNNNNAGG	1 cut(s)	444
EcoO109I	RGGNCCY	1 cut(s)	1133
EcoO65I	GGTNACC	1 cut(s)	557
EcoRII	CCWGG	4 cut(s)	169, 325, 598, 1570
EcoT14I	CCWWGG	5 cut(s)	281, 418, 735, 807, 1372
EcoT22I	ATGCAT	2 cut(s)	1413, 1590
EcoT38I	GRGCYC	1 cut(s)	27
ErhI	CCWWGG	5 cut(s)	281, 418, 735, 807, 1372
Esp3I	CGTCTC	1 cut(s)	104
FaqI	GGGAC	2 cut(s)	1336, 1390
Fnu4HI	GCNGC	4 cut(s)	72, 753, 858, 1155
FokI	GGATG	5 cut(s)	587, 1023, 1301, 1389, 1551
FriOI	GRGCYC	1 cut(s)	27
Fsp4HI	GCNGC	4 cut(s)	72, 753, 858, 1155
FspAI	RTGCGCAY	1 cut(s)	390
FspBI	CTAG	8 cut(s)	20, 677, 1158, 1233, 1254, 1478, 1611, 1705
FspI	TGCGCA	1 cut(s)	390
GlaI	GCGC	1 cut(s)	390
GluI	GCNGC	4 cut(s)	72, 753, 858, 1155
GsuI	CTGGAG	2 cut(s)	902, 1593
HaeIII	GGCC	2 cut(s)	598, 801
HapII	CCGG	3 cut(s)	720, 798, 1505
HgaI	GACGC	2 cut(s)	548, 758
HhaI	GCGC	1 cut(s)	391
Hin1I	GRCGYC	1 cut(s)	540
Hin6I	GCGC	1 cut(s)	389
HinP1I	GCGC	1 cut(s)	389
HincII	GTYRAC	2 cut(s)	1259, 1513
HindII	GTYRAC	2 cut(s)	1259, 1513
HinfI	GANTC	7 cut(s)	319, 579, 875, 986, 1071, 1093, 1554
HpaII	CCGG	3 cut(s)	720, 798, 1505
HphI	GGTGA	4 cut(s)	235, 569, 574, 724
Hpy166II	GTNNAC	7 cut(s)	85, 220, 682, 924, 1259, 1369, 1513
Hpy188I	TCNGA	7 cut(s)	289, 361, 574, 1041, 1407, 1523, 1673
Hpy188III	TCNNGA	4 cut(s)	296, 467, 746, 1478
Hpy8I	GTNNAC	7 cut(s)	85, 220, 682, 924, 1259, 1369, 1513
Hpy99I	CGWCG	3 cut(s)	976, 1442, 1677
HpyAV	CCTTC	6 cut(s)	100, 362, 517, 969, 978, 1321
HpyCH4III	ACNGT	5 cut(s)	154, 415, 686, 1084, 1630
HpyCH4IV	ACGT	3 cut(s)	81, 406, 1603
HpyCH4V	TGCA	9 cut(s)	500, 857, 992, 1204, 1295, 1394, 1411, 1417, 1588
HpyF10VI	GCNNNNNNNGC	1 cut(s)	749
HpyF3I	CTNAG	6 cut(s)	31, 309, 441, 480, 1444, 1530
HpySE526I	ACGT	3 cut(s)	81, 406, 1603
Hsp92I	GRCGYC	1 cut(s)	540
HspAI	GCGC	1 cut(s)	389
KspI	CCGCGG	1 cut(s)	72
Kzo9I	GATC	4 cut(s)	36, 1108, 1498, 1668
LmnI	GCTCC	4 cut(s)	30, 602, 623, 889
Lsp1109I	GCAGC	3 cut(s)	764, 869, 1141
LweI	GCATC	5 cut(s)	135, 509, 1282, 1361, 1398
MaeI	CTAG	8 cut(s)	20, 677, 1158, 1233, 1254, 1478, 1611, 1705
MaeII	ACGT	3 cut(s)	81, 406, 1603
MaeIII	GTNAC	5 cut(s)	395, 402, 422, 557, 772
MalI	GATC	4 cut(s)	38, 1110, 1500, 1670
MboI	GATC	4 cut(s)	36, 1108, 1498, 1668
MboII	GAAGA	6 cut(s)	31, 34, 377, 710, 1066, 1654
MfeI	CAATTG	2 cut(s)	613, 1456
MflI	RGATCY	3 cut(s)	36, 1498, 1668
MhlI	GDGCHC	2 cut(s)	27, 317
MlsI	TGGCCA	1 cut(s)	598
MluCI	AATT	8 cut(s)	489, 531, 549, 613, 714, 1334, 1362, 1456
MluNI	TGGCCA	1 cut(s)	598
MlyI	GAGTC	1 cut(s)	869
MmeI	TCCRAC	1 cut(s)	1696
MnlI	CCTC	9 cut(s)	38, 56, 71, 74, 340, 548, 1024, 1062, 1692
Mox20I	TGGCCA	1 cut(s)	598
Mph1103I	ATGCAT	2 cut(s)	1413, 1590
MscI	TGGCCA	1 cut(s)	598
MseI	TTAA	3 cut(s)	9, 213, 1116
MslI	CAYNNNNRTG	3 cut(s)	225, 255, 1416
Msp20I	TGGCCA	1 cut(s)	598
MspA1I	CMGCKG	2 cut(s)	71, 1265
MspI	CCGG	3 cut(s)	720, 798, 1505
MspR9I	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
MunI	CAATTG	2 cut(s)	613, 1456
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	4 cut(s)	171, 327, 600, 1572
MvnI	CGCG	1 cut(s)	71
MwoI	GCNNNNNNNGC	1 cut(s)	749
NciI	CCSGG	1 cut(s)	798
NcoI	CCATGG	4 cut(s)	281, 418, 735, 807
NdeII	GATC	4 cut(s)	36, 1108, 1498, 1668
NheI	GCTAGC	1 cut(s)	1157
NlaIV	GGNNCC	5 cut(s)	26, 373, 934, 1134, 1651
NmuCI	GTSAC	4 cut(s)	395, 402, 422, 557
NsbI	TGCGCA	1 cut(s)	390
NsiI	ATGCAT	2 cut(s)	1413, 1590
NspI	RCATGY	2 cut(s)	389, 1222
NspV	TTCGAA	1 cut(s)	135
PaeI	GCATGC	1 cut(s)	389
PcsI	WCGNNNNNNNCGW	1 cut(s)	888
PctI	GAATGC	1 cut(s)	1396
PfeI	GAWTC	6 cut(s)	319, 579, 986, 1071, 1093, 1554
PflMI	CCANNNNNTGG	3 cut(s)	252, 575, 808
PfoI	TCCNGGA	1 cut(s)	1570
PkrI	GCNGC	4 cut(s)	73, 754, 859, 1156
PleI	GAGTC	1 cut(s)	869
PmaCI	CACGTG	1 cut(s)	407
PmlI	CACGTG	1 cut(s)	407
PpsI	GAGTC	1 cut(s)	869
Ppu21I	YACGTR	1 cut(s)	407
PpuMI	RGGWCCY	1 cut(s)	1133
Psp5II	RGGWCCY	1 cut(s)	1133
Psp6I	CCWGG	4 cut(s)	169, 325, 598, 1570
PspCI	CACGTG	1 cut(s)	407
PspEI	GGTNACC	1 cut(s)	557
PspGI	CCWGG	4 cut(s)	169, 325, 598, 1570
PspN4I	GGNNCC	5 cut(s)	26, 373, 934, 1134, 1651
PspPI	GGNCC	4 cut(s)	173, 293, 1133, 1649
PspPPI	RGGWCCY	1 cut(s)	1133
PstI	CTGCAG	1 cut(s)	994
PsuI	RGATCY	3 cut(s)	36, 1498, 1668
PvuII	CAGCTG	1 cut(s)	1265
RsaI	GTAC	4 cut(s)	923, 1346, 1370, 1632
RsaNI	GTAC	4 cut(s)	922, 1345, 1369, 1631
RseI	CAYNNNNRTG	3 cut(s)	225, 255, 1416
SacII	CCGCGG	1 cut(s)	72
SaqAI	TTAA	3 cut(s)	9, 213, 1116
SatI	GCNGC	4 cut(s)	72, 753, 858, 1155
Sau3AI	GATC	4 cut(s)	36, 1108, 1498, 1668
Sau96I	GGNCC	4 cut(s)	173, 293, 1133, 1649
SchI	GAGTC	1 cut(s)	869
ScrFI	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
SduI	GDGCHC	2 cut(s)	27, 317
SfaNI	GCATC	5 cut(s)	135, 509, 1282, 1361, 1398
SfcI	CTRYAG	4 cut(s)	91, 411, 990, 1213
Sfr303I	CCGCGG	1 cut(s)	72
SfuI	TTCGAA	1 cut(s)	135
SgrBI	CCGCGG	1 cut(s)	72
SinI	GGWCC	4 cut(s)	173, 293, 1133, 1649
SmiMI	CAYNNNNRTG	3 cut(s)	225, 255, 1416
SmlI	CTYRAG	1 cut(s)	744
SmoI	CTYRAG	1 cut(s)	744
SphI	GCATGC	1 cut(s)	389
Sse9I	AATT	8 cut(s)	489, 531, 549, 613, 714, 1334, 1362, 1456
SsiI	CCGC	3 cut(s)	69, 71, 936
SspI	AATATT	2 cut(s)	1060, 1384
SspMI	CTAG	8 cut(s)	20, 677, 1158, 1233, 1254, 1478, 1611, 1705
StyD4I	CCNGG	5 cut(s)	169, 325, 598, 796, 1570
StyI	CCWWGG	5 cut(s)	281, 418, 735, 807, 1372
TaaI	ACNGT	5 cut(s)	154, 415, 686, 1084, 1630
TaiI	ACGT	3 cut(s)	84, 409, 1606
TaqI	TCGA	5 cut(s)	48, 135, 891, 971, 1552
TaqII	GACCGA	1 cut(s)	992
TasI	AATT	8 cut(s)	489, 531, 549, 613, 714, 1334, 1362, 1456
TatI	WGTACW	1 cut(s)	921
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	6 cut(s)	319, 579, 986, 1071, 1093, 1554
Tru1I	TTAA	3 cut(s)	9, 213, 1116
Tru9I	TTAA	3 cut(s)	9, 213, 1116
TscAI	CASTG	3 cut(s)	157, 257, 317
TseFI	GTSAC	4 cut(s)	395, 402, 422, 557
TseI	GCWGC	3 cut(s)	752, 857, 1154
Tsp45I	GTSAC	4 cut(s)	395, 402, 422, 557
TspDTI	ATGAA	6 cut(s)	173, 378, 639, 707, 1066, 1637
TspGWI	ACGGA	2 cut(s)	945, 1078
TspRI	CASTG	3 cut(s)	157, 257, 317
Van91I	CCANNNNNTGG	3 cut(s)	252, 575, 808
VpaK11BI	GGWCC	4 cut(s)	173, 293, 1133, 1649
XagI	CCTNNNNNAGG	1 cut(s)	444
XbaI	TCTAGA	1 cut(s)	1477
XceI	RCATGY	2 cut(s)	389, 1222
XcmI	CCANNNNNNNNNTGG	1 cut(s)	279
XspI	CTAG	8 cut(s)	20, 677, 1158, 1233, 1254, 1478, 1611, 1705
Zsp2I	ATGCAT	2 cut(s)	1413, 1590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.