Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002961

Physical Location & Seq

Genomic Coordinates Reverse (-)

23794672 .. 23798920

Gene Structure 4249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0237800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGGCCAGAGTTACTTGGTTCTTCCTGATATACTTGATCTGTTGTGAGGTGGCTAGCTGCTTAACTATGGTAGCACAAACTAACATTAACATCACCACAGACCGGTCTGCTCTTCTTGCTCTCAAAGACCGTATCACCAATGACCCTCGAAACATAGTCTTCACTAACTGGTCAACCACAACCCCTATTTGTAACTGGGTTGGAGTCACTTGTGGTGCACGCCATCATCGAATCGCAGAGTTGAACGTATCTTACTTTGGTCTCACAGGCACCATTCCTCCAGAGCTAGGCAACTTATCTTTTCTTGTTGATCTGGATTTCAAAAATAATAGTTTTCACGGTACCTTGCCTCAAGAATTGGCTCGCCTGCATCGGTTGAAGTTTATTAACTTAGGATACAACAAGTTTTTGGGAGTGATTCCGTCATGGTTTGGGTCCTTGTCCAAACTTCAAGAATTCAGTTTTTATGGTAATCAATTTTTTGGTTCCATCCCAGCTATAATATTCAACTTATCTGCTCTACAAATAATTGATCTGAGTTATAACCAACTCTCAGAGATTCCAAATGAGATGGTCACCTTGAATCAGCTAGAAGAGTTGCTTGTGCAAGAAAATGCCTTAAAAGGGCCTATTCCTATGGGTGTCTTCAATATGTCATCTTTGACTACTGTAAGTTTCTATGGAAACAAGTTGAGTGGTAGAATTCCTGACAATATATGTCAACATCTTCCAAATATCCAAGAGTTGAACTTGGGTATCAATCAGTTTGATGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTACTTTGGAGTTGGGCGATAACAGGTTTAGTGGAAGCATACACAAAGATACTGGGAACTTAACTCGGATAAAGAGGATTAGCCTTGTCATTAATAGCTTGACAGAGTGGTTGTCGCTCGGTCAAAATAATCTAAATGGCCATATCTCATCCTCAATCTTCAACAGCTCCACAATAAAAGCATTAGATCTCAACTACAATCAGCTTTCAGGTAGCCTCCCAGCAGACATAGGCCTTGCGCTTCCAAAACTAGAGTTCTTTTATGCAGGAGGGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTCAGATTCTAGACCTGGGAACAAGAAATTGCAGCTTGAGAGGTAACATCCCCAGTGATATTGGGAATTTGAGTAGCTTGATAGTTTTAACCCTGGAAGACAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTACATAATCTTCAAGCTTGGGATATGACTGGTAACACATTGCAAGGATACATTCCAGATGAGCTTTGTCAACTAGAAAACTTATTTGGTTTGTACTTGGGTGGGAATCAACTCTCTGGTTCTATACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAATTCTATCTTTACGGTCCAATTTGTTGAATTCCACAATCCCATCTTCCCTATGGGGACTTACATATATCTTGAAAATAAACTTGTCATCCAATTCTCTAATTGGGCCTCTATCAGGTGGTGTTGGTAATTTGAAAGCTGCTACAGACATAGATGTATCATACAACCAATTATCTGGTAGTGTACCAAGTAGCATTGGGAGTTTAGTGAGTTTGGTCAGTCTCTCCTTAGCACATAACAATCTAGAAGGCCCTATTCCCAGTTCCTTTGCAACTTGTGTAAGCTTAGAAGGATTGGATTTATCTCGAAATAGTTTCACTGGATTGATTCCAAAGTCTCTAGAAGCACTCTCATTTCTCAAGCATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGCGGCGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGGATCCCAATTTCATGTTCCACCATGCAAAAGAAAAACTAGCATATCTATCTTGAAGTATGTTATTCCGGGGATCTTGTCAGCAATGCTTCTAGCGACCTCCATATTTTGGATGCTGATGTTACGCAGAAAAAAGAATGTGAAAGCTGCAACACATACTATCTTGATGCCTCAAGTTTTATGGAGAAGAGTTTCATACCAAGAGCTCTTTAGTGTGACAGATGGATTCAATGAAAGAAACTTACTTGGTAGTGGGGCTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGACGTTGCGATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAATGTTCGTCACCGAAATCTTGTCAAAGTCGTCAGTTGCTGCAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTTTCAGAATTCTTCTTTGAACATAATGCAGAGGTTGGATATAATGATAGATGTTGATTGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009668 GO:0009987 GO:0010027 GO:0016020 GO:0016043 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061024 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PspA_IM30

Protein Analysis

816

Amino Acids

89.65

Weight (kDa)

7.21

Isoelectric Point (pI)

33.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	33 - 71	3.7e-10	Leucine rich repeat N-terminal domain
LRR_8	PF13855	161 - 207	5.1e-06	Leucine rich repeat
LRR_14	PF23598	163 - 249	1.6e-07	Leucine-rich repeat region
LRR_14	PF23598	371 - 485	5.7e-08	Leucine-rich repeat region
LRR_8	PF13855	564 - 607	9.6e-07	Leucine rich repeat
Pkinase	PF00069	710 - 798	7.3e-11	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	713 - 813	4.2e-15	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65260
fragaria_vesca	FvH4_1g24800 FvH4_1g24800 FvH4_2g19990 FvH4_2g19990 FvH4_3g16870
malus_domestica	MD00G1019200.v1.1 MD15G1434500.v1.1 MD17G1177400.v1.1
prunus_persica	Prupe.1G203200_v2.0.a1
pyrus_communis	pycom13g26650 pycom17g18630
rosa_chinensis	RchiOBHm_Chr2g0122441 RchiOBHm_Chr5g0028111 RchiOBHm_Chr6g0285711
rosa_laevigata	RLG00000012615 RLG00000018677 RLG00000033067
rosa_multiflora	Rmu_sc0001356.1_g000011 Rmu_sc0001989.1_g000001 Rmu_sc0003832.1_g000020
rosa_roxburghii	Rroxscaffold_2G00121650 Rroxscaffold_7G00182810
rosa_rugosa	Rorug02G0237700 Rorug02G0237800 Rorug05G0104200 Rorug06G0176600 Rorug06G0176700
rosa_samantha	Rh5BG196000 Rh5CG216000 Rh5DG197700 Rh6AG288200 Rh6BG289800 Rh6CG290800 Rh6DG283500
rosa_wichuraiana	Rw2G023650 Rw5G018030 Rw6G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
Acc65I	GGTACC	1 cut(s)	341
AccB1I	GGYRCC	2 cut(s)	269, 341
AccB7I	CCANNNNNTGG	2 cut(s)	792, 2007
AccBSI	CCGCTC	1 cut(s)	1245
AciI	CCGC	3 cut(s)	1245, 1839, 1842
AclWI	GGATC	3 cut(s)	1896, 1909, 1979
AcoI	YGGCCR	2 cut(s)	3, 949
AcsI	RAATTY	8 cut(s)	455, 702, 1198, 1434, 1462, 1801, 1830, 2392
AcuI	CTGAAG	1 cut(s)	1118
AfaI	GTAC	3 cut(s)	343, 1367, 1617
AfiI	CCNNNNNNNGG	7 cut(s)	102, 287, 624, 792, 1547, 1841, 2007
AgeI	ACCGGT	1 cut(s)	102
AjnI	CCWGG	2 cut(s)	1146, 1224
AjuI	GAANNNNNNNTTGG	6 cut(s)	1341, 1373, 1815, 1847, 1899, 1931
AleI	CACNNNNGTG	1 cut(s)	1092
Alw21I	GWGCWC	2 cut(s)	220, 2106
Alw26I	GTCTC	3 cut(s)	266, 1658, 1773
Alw44I	GTGCAC	1 cut(s)	216
AlwI	GGATC	3 cut(s)	1896, 1909, 1979
AlwNI	CAGNNNCTG	1 cut(s)	2313
AoxI	GGCC	7 cut(s)	3, 626, 949, 1042, 1247, 1538, 1681
ApaLI	GTGCAC	1 cut(s)	216
ApeKI	GCWGC	5 cut(s)	57, 1164, 1571, 2045, 2313
ApoI	RAATTY	8 cut(s)	455, 702, 1198, 1434, 1462, 1801, 1830, 2392
AseI	ATTAAT	1 cut(s)	903
AsiGI	ACCGGT	1 cut(s)	102
Asp700I	GAANNNNTTC	1 cut(s)	2089
Asp718I	GGTACC	1 cut(s)	341
AspLEI	GCGC	1 cut(s)	1051
AspS9I	GGNCC	8 cut(s)	435, 626, 773, 1247, 1449, 1538, 1682, 1844
AsuC2I	CCSGG	1 cut(s)	1968
AsuHPI	GGTGA	5 cut(s)	85, 127, 568, 1079, 2276
AsuNHI	GCTAGC	1 cut(s)	53
AvaII	GGWCC	4 cut(s)	435, 773, 1449, 1844
BaeGI	GKGCMC	1 cut(s)	220
BaeI	ACNNNNGTAYC	2 cut(s)	739, 772
BalI	TGGCCA	2 cut(s)	5, 951
BamHI	GGATCC	1 cut(s)	1901
BanI	GGYRCC	2 cut(s)	269, 341
BanII	GRGCYC	1 cut(s)	2106
BbsI	GAAGAC	4 cut(s)	151, 637, 1236, 1276
Bbv12I	GWGCWC	2 cut(s)	220, 2106
BbvI	GCAGC	5 cut(s)	44, 1176, 1558, 2032, 2300
BccI	CCATC	9 cut(s)	231, 497, 565, 764, 790, 1121, 1483, 2114, 2183
BciT130I	CCWGG	2 cut(s)	1148, 1226
BciVI	GTATCC	2 cut(s)	389, 1313
BcnI	CCSGG	1 cut(s)	1968
BcoDI	GTCTC	3 cut(s)	266, 1658, 1773
BfmI	CTRYAG	2 cut(s)	1575, 2314
BfuI	GTATCC	2 cut(s)	389, 1313
BglII	AGATCT	1 cut(s)	997
BisI	GCNGC	6 cut(s)	58, 1165, 1572, 1840, 2046, 2314
BlsI	GCNGC	6 cut(s)	59, 1166, 1573, 1841, 2047, 2315
Bme1390I	CCNGG	3 cut(s)	1148, 1226, 1968
Bme18I	GGWCC	4 cut(s)	435, 773, 1449, 1844
BmgT120I	GGNCC	8 cut(s)	435, 626, 773, 1247, 1449, 1538, 1682, 1844
BmiI	GGNNCC	6 cut(s)	271, 343, 436, 487, 1903, 2366
BmrFI	CCNGG	3 cut(s)	1148, 1226, 1968
BmrI	ACTGGG	4 cut(s)	205, 873, 1179, 1686
BmsI	GCATC	5 cut(s)	379, 1433, 1804, 2001, 2055
BmtI	GCTAGC	1 cut(s)	57
BmuI	ACTGGG	4 cut(s)	205, 873, 1179, 1686
BpiI	GAAGAC	4 cut(s)	151, 637, 1236, 1276
BpmI	CTGGAG	1 cut(s)	264
Bpu10I	CCTNAGC	1 cut(s)	1660
BpuEI	CTTGAG	5 cut(s)	336, 1189, 1775, 2055, 2390
BpuMI	CCSGG	1 cut(s)	1968
BsaI	GGTCTC	1 cut(s)	266
BsaJI	CCNNGG	5 cut(s)	1147, 1224, 1822, 1885, 1967
BsaWI	WCCGGW	1 cut(s)	102
BsaXI	ACNNNNNCTCC	2 cut(s)	262, 292
Bsc4I	CCNNNNNNNGG	7 cut(s)	102, 287, 624, 792, 1547, 1841, 2007
Bse118I	RCCGGY	1 cut(s)	102
Bse1I	ACTGG	7 cut(s)	173, 200, 868, 1185, 1306, 1692, 1756
Bse3DI	GCAATG	3 cut(s)	803, 1310, 1989
BseBI	CCWGG	2 cut(s)	1148, 1226
BseDI	CCNNGG	5 cut(s)	1147, 1224, 1822, 1885, 1967
BseGI	GGATG	6 cut(s)	489, 782, 959, 1179, 1520, 2016
BseLI	CCNNNNNNNGG	7 cut(s)	102, 287, 624, 792, 1547, 1841, 2007
BseMI	GCAATG	3 cut(s)	803, 1310, 1989
BseMII	CTCAG	5 cut(s)	527, 567, 1105, 1119, 2178
BseNI	ACTGG	7 cut(s)	173, 200, 868, 1185, 1306, 1692, 1756
BseSI	GKGCMC	1 cut(s)	220
BseXI	GCAGC	5 cut(s)	44, 1176, 1558, 2032, 2300
BseYI	CCCAGC	2 cut(s)	493, 1030
BshFI	GGCC	7 cut(s)	5, 628, 951, 1044, 1249, 1540, 1683
BshNI	GGYRCC	2 cut(s)	269, 341
BshTI	ACCGGT	1 cut(s)	102
BsiHKAI	GWGCWC	2 cut(s)	220, 2106
BsiSI	CCGG	2 cut(s)	103, 1967
BslFI	GGGAC	1 cut(s)	1503
BslI	CCNNNNNNNGG	7 cut(s)	102, 287, 624, 792, 1547, 1841, 2007
BsmAI	GTCTC	3 cut(s)	266, 1658, 1773
BsmFI	GGGAC	1 cut(s)	1503
BsnI	GGCC	7 cut(s)	5, 628, 951, 1044, 1249, 1540, 1683
Bso31I	GGTCTC	1 cut(s)	266
Bsp1286I	GDGCHC	2 cut(s)	220, 2106
Bsp143I	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
Bsp19I	CCATGG	1 cut(s)	1885
BspACI	CCGC	3 cut(s)	1245, 1839, 1842
BspANI	GGCC	7 cut(s)	5, 628, 951, 1044, 1249, 1540, 1683
BspCNI	CTCAG	5 cut(s)	528, 566, 1104, 1120, 2177
BspLI	GGNNCC	6 cut(s)	271, 343, 436, 487, 1903, 2366
BspMAI	CTGCAG	1 cut(s)	2318
BspOI	GCTAGC	1 cut(s)	57
BspPI	GGATC	3 cut(s)	1896, 1909, 1979
BspQI	GCTCTTC	1 cut(s)	117
BspT107I	GGYRCC	2 cut(s)	269, 341
BspTNI	GGTCTC	1 cut(s)	266
BsrBI	CCGCTC	1 cut(s)	1245
BsrDI	GCAATG	3 cut(s)	803, 1310, 1989
BsrFI	RCCGGY	1 cut(s)	102
BsrI	ACTGG	7 cut(s)	173, 200, 868, 1185, 1306, 1692, 1756
BssAI	RCCGGY	1 cut(s)	102
BssECI	CCNNGG	5 cut(s)	1147, 1224, 1822, 1885, 1967
BssMI	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
BssT1I	CCWWGG	2 cut(s)	1822, 1885
Bst2UI	CCWGG	2 cut(s)	1148, 1226
Bst4CI	ACNGT	4 cut(s)	131, 341, 670, 1449
Bst6I	CTCTTC	3 cut(s)	117, 588, 2080
BstC8I	GCNNGC	5 cut(s)	55, 220, 364, 368, 1247
BstDSI	CCRYGG	1 cut(s)	1885
BstEII	GGTNACC	1 cut(s)	574
BstENI	CCTNNNNNAGG	1 cut(s)	1545
BstF5I	GGATG	6 cut(s)	489, 782, 959, 1179, 1520, 2016
BstHHI	GCGC	1 cut(s)	1051
BstKTI	GATC	6 cut(s)	39, 313, 535, 1000, 1904, 1974
BstMAI	GTCTC	3 cut(s)	266, 1658, 1773
BstMBI	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
BstMWI	GCNNNNNNNGC	1 cut(s)	116
BstNI	CCWGG	2 cut(s)	1148, 1226
BstNSI	RCATGY	1 cut(s)	2356
BstPI	GGTNACC	1 cut(s)	574
BstSCI	CCNGG	3 cut(s)	1146, 1224, 1966
BstSFI	CTRYAG	2 cut(s)	1575, 2314
BstSLI	GKGCMC	1 cut(s)	220
BstV1I	GCAGC	5 cut(s)	44, 1176, 1558, 2032, 2300
BstV2I	GAAGAC	4 cut(s)	151, 637, 1236, 1276
BstX2I	RGATCY	3 cut(s)	997, 1901, 1971
BstXI	CCANNNNNNTGG	1 cut(s)	1607
BstYI	RGATCY	3 cut(s)	997, 1901, 1971
BsuI	GTATCC	2 cut(s)	389, 1313
BsuRI	GGCC	7 cut(s)	5, 628, 951, 1044, 1249, 1540, 1683
BtgI	CCRYGG	1 cut(s)	1885
BtsCI	GGATG	6 cut(s)	489, 782, 959, 1179, 1520, 2016
BtsIMutI	CAGTG	3 cut(s)	1099, 1192, 1749
Cac8I	GCNNGC	5 cut(s)	55, 220, 364, 368, 1247
CaiI	CAGNNNCTG	1 cut(s)	2313
CfoI	GCGC	1 cut(s)	1051
Cfr10I	RCCGGY	1 cut(s)	102
Cfr13I	GGNCC	8 cut(s)	435, 626, 773, 1247, 1449, 1538, 1682, 1844
Csp6I	GTAC	3 cut(s)	342, 1366, 1616
CspAI	ACCGGT	1 cut(s)	102
CspCI	CAANNNNNGTGG	2 cut(s)	676, 711
CviAII	CATG	5 cut(s)	426, 1886, 1913, 1923, 2353
CviQI	GTAC	3 cut(s)	342, 1366, 1616
DpnI	GATC	6 cut(s)	38, 312, 534, 999, 1903, 1973
DpnII	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
EaeI	YGGCCR	2 cut(s)	3, 949
Eam1104I	CTCTTC	3 cut(s)	117, 588, 2080
EarI	CTCTTC	3 cut(s)	117, 588, 2080
Ecl136II	GAGCTC	1 cut(s)	2104
Eco130I	CCWWGG	2 cut(s)	1822, 1885
Eco147I	AGGCCT	1 cut(s)	1044
Eco24I	GRGCYC	1 cut(s)	2106
Eco31I	GGTCTC	1 cut(s)	266
Eco47I	GGWCC	4 cut(s)	435, 773, 1449, 1844
Eco53kI	GAGCTC	1 cut(s)	2104
Eco57I	CTGAAG	1 cut(s)	1118
Eco91I	GGTNACC	1 cut(s)	574
EcoICRI	GAGCTC	1 cut(s)	2104
EcoNI	CCTNNNNNAGG	1 cut(s)	1545
EcoO109I	RGGNCCY	3 cut(s)	435, 626, 1682
EcoO65I	GGTNACC	1 cut(s)	574
EcoRI	GAATTC	5 cut(s)	455, 702, 1434, 1462, 2392
EcoRII	CCWGG	2 cut(s)	1146, 1224
EcoT14I	CCWWGG	2 cut(s)	1822, 1885
EcoT38I	GRGCYC	1 cut(s)	2106
ErhI	CCWWGG	2 cut(s)	1822, 1885
FaeI	CATG	5 cut(s)	429, 1889, 1916, 1926, 2356
FalI	AAGNNNNNCTT	2 cut(s)	585, 617
FaqI	GGGAC	1 cut(s)	1503
FatI	CATG	5 cut(s)	425, 1885, 1912, 1922, 2352
FauI	CCCGC	1 cut(s)	1238
Fnu4HI	GCNGC	6 cut(s)	58, 1165, 1572, 1840, 2046, 2314
FokI	GGATG	6 cut(s)	476, 769, 946, 1166, 1507, 2023
FriOI	GRGCYC	1 cut(s)	2106
Fsp4HI	GCNGC	6 cut(s)	58, 1165, 1572, 1840, 2046, 2314
GlaI	GCGC	1 cut(s)	1050
GluI	GCNGC	6 cut(s)	58, 1165, 1572, 1840, 2046, 2314
GsaI	CCCAGC	2 cut(s)	497, 1034
GsuI	CTGGAG	1 cut(s)	264
HaeIII	GGCC	7 cut(s)	5, 628, 951, 1044, 1249, 1540, 1683
HapII	CCGG	2 cut(s)	103, 1967
HhaI	GCGC	1 cut(s)	1051
Hin1II	CATG	5 cut(s)	429, 1889, 1916, 1926, 2356
Hin6I	GCGC	1 cut(s)	1049
HinP1I	GCGC	1 cut(s)	1049
HincII	GTYRAC	3 cut(s)	174, 722, 1343
HindII	GTYRAC	3 cut(s)	174, 722, 1343
HindIII	AAGCTT	2 cut(s)	1287, 1714
HpaII	CCGG	2 cut(s)	103, 1967
HphI	GGTGA	5 cut(s)	85, 127, 568, 1079, 2276
Hpy166II	GTNNAC	6 cut(s)	174, 218, 722, 776, 1343, 1616
Hpy188I	TCNGA	8 cut(s)	537, 556, 879, 1129, 1137, 1800, 2188, 2391
Hpy8I	GTNNAC	6 cut(s)	174, 218, 722, 776, 1343, 1616
HpyAV	CCTTC	4 cut(s)	1410, 1673, 1715, 2225
HpyCH4III	ACNGT	4 cut(s)	131, 341, 670, 1449
HpyCH4IV	ACGT	2 cut(s)	246, 2199
HpyF10VI	GCNNNNNNNGC	1 cut(s)	116
HpySE526I	ACGT	2 cut(s)	246, 2199
Hsp92II	CATG	5 cut(s)	429, 1889, 1916, 1926, 2356
HspAI	GCGC	1 cut(s)	1049
KpnI	GGTACC	1 cut(s)	345
Kzo9I	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
LguI	GCTCTTC	1 cut(s)	117
LmnI	GCTCC	2 cut(s)	983, 2364
Lsp1109I	GCAGC	5 cut(s)	44, 1176, 1558, 2032, 2300
LweI	GCATC	5 cut(s)	379, 1433, 1804, 2001, 2055
MaeII	ACGT	2 cut(s)	246, 2199
MaeIII	GTNAC	9 cut(s)	10, 191, 205, 574, 1175, 1304, 2019, 2113, 2282
MalI	GATC	6 cut(s)	38, 312, 534, 999, 1903, 1973
MbiI	CCGCTC	1 cut(s)	1245
MboI	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
MfeI	CAATTG	1 cut(s)	1238
MflI	RGATCY	3 cut(s)	997, 1901, 1971
MhlI	GDGCHC	2 cut(s)	220, 2106
MlsI	TGGCCA	2 cut(s)	5, 951
MluNI	TGGCCA	2 cut(s)	5, 951
MlyI	GAGTC	3 cut(s)	213, 1812, 1884
MmeI	TCCRAC	2 cut(s)	181, 2400
Mox20I	TGGCCA	2 cut(s)	5, 951
MroXI	GAANNNNTTC	1 cut(s)	2089
MscI	TGGCCA	2 cut(s)	5, 951
MseI	TTAA	7 cut(s)	62, 87, 387, 620, 872, 903, 1220
MslI	CAYNNNNRTG	1 cut(s)	1092
Msp20I	TGGCCA	2 cut(s)	5, 951
MspI	CCGG	2 cut(s)	103, 1967
MspR9I	CCNGG	3 cut(s)	1148, 1226, 1968
MunI	CAATTG	1 cut(s)	1238
MvaI	CCWGG	2 cut(s)	1148, 1226
MwoI	GCNNNNNNNGC	1 cut(s)	116
NciI	CCSGG	1 cut(s)	1968
NcoI	CCATGG	1 cut(s)	1885
NdeII	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
NheI	GCTAGC	1 cut(s)	53
NlaIII	CATG	5 cut(s)	429, 1889, 1916, 1926, 2356
NlaIV	GGNNCC	6 cut(s)	271, 343, 436, 487, 1903, 2366
NmuCI	GTSAC	4 cut(s)	205, 574, 2113, 2282
NspI	RCATGY	1 cut(s)	2356
OliI	CACNNNNGTG	1 cut(s)	1092
PceI	AGGCCT	1 cut(s)	1044
PciSI	GCTCTTC	1 cut(s)	117
PcsI	WCGNNNNNNNCGW	1 cut(s)	226
PdmI	GAANNNNTTC	1 cut(s)	2089
PflMI	CCANNNNNTGG	2 cut(s)	792, 2007
PinAI	ACCGGT	1 cut(s)	102
PkrI	GCNGC	6 cut(s)	59, 1166, 1573, 1841, 2047, 2315
PleI	GAGTC	3 cut(s)	212, 1812, 1884
PpsI	GAGTC	3 cut(s)	212, 1812, 1884
PpuMI	RGGWCCY	1 cut(s)	435
PshBI	ATTAAT	1 cut(s)	903
PsiI	TTATAA	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	2106
Psp5II	RGGWCCY	1 cut(s)	435
Psp6I	CCWGG	2 cut(s)	1146, 1224
PspEI	GGTNACC	1 cut(s)	574
PspFI	CCCAGC	2 cut(s)	493, 1030
PspGI	CCWGG	2 cut(s)	1146, 1224
PspN4I	GGNNCC	6 cut(s)	271, 343, 436, 487, 1903, 2366
PspPI	GGNCC	8 cut(s)	435, 626, 773, 1247, 1449, 1538, 1682, 1844
PspPPI	RGGWCCY	1 cut(s)	435
PsrI	GAACNNNNNNTAC	2 cut(s)	236, 268
PstI	CTGCAG	1 cut(s)	2318
PstNI	CAGNNNCTG	1 cut(s)	2313
PsuI	RGATCY	3 cut(s)	997, 1901, 1971
RsaI	GTAC	3 cut(s)	343, 1367, 1617
RsaNI	GTAC	3 cut(s)	342, 1366, 1616
RseI	CAYNNNNRTG	1 cut(s)	1092
SacI	GAGCTC	1 cut(s)	2106
SapI	GCTCTTC	1 cut(s)	117
SaqAI	TTAA	7 cut(s)	62, 87, 387, 620, 872, 903, 1220
SatI	GCNGC	6 cut(s)	58, 1165, 1572, 1840, 2046, 2314
Sau3AI	GATC	6 cut(s)	36, 310, 532, 997, 1901, 1971
Sau96I	GGNCC	8 cut(s)	435, 626, 773, 1247, 1449, 1538, 1682, 1844
SchI	GAGTC	3 cut(s)	213, 1812, 1884
ScrFI	CCNGG	3 cut(s)	1148, 1226, 1968
SduI	GDGCHC	2 cut(s)	220, 2106
SfaNI	GCATC	5 cut(s)	379, 1433, 1804, 2001, 2055
SfcI	CTRYAG	2 cut(s)	1575, 2314
SinI	GGWCC	4 cut(s)	435, 773, 1449, 1844
SmiMI	CAYNNNNRTG	1 cut(s)	1092
SmlI	CTYRAG	5 cut(s)	351, 1168, 1790, 2070, 2369
SmoI	CTYRAG	5 cut(s)	351, 1168, 1790, 2070, 2369
SseBI	AGGCCT	1 cut(s)	1044
SsiI	CCGC	3 cut(s)	1245, 1839, 1842
SspI	AATATT	1 cut(s)	504
SstI	GAGCTC	1 cut(s)	2106
StuI	AGGCCT	1 cut(s)	1044
StyD4I	CCNGG	3 cut(s)	1146, 1224, 1966
StyI	CCWWGG	2 cut(s)	1822, 1885
TaaI	ACNGT	4 cut(s)	131, 341, 670, 1449
TaiI	ACGT	2 cut(s)	249, 2202
TaqI	TCGA	3 cut(s)	148, 229, 1738
TaqII	GACCGA	1 cut(s)	920
TatI	WGTACW	1 cut(s)	1365
TauI	GCSGC	1 cut(s)	1842
Tru1I	TTAA	7 cut(s)	62, 87, 387, 620, 872, 903, 1220
Tru9I	TTAA	7 cut(s)	62, 87, 387, 620, 872, 903, 1220
TscAI	CASTG	3 cut(s)	1099, 1192, 1756
TseFI	GTSAC	4 cut(s)	205, 574, 2113, 2282
TseI	GCWGC	5 cut(s)	57, 1164, 1571, 2045, 2313
Tsp45I	GTSAC	4 cut(s)	205, 574, 2113, 2282
TspDTI	ATGAA	3 cut(s)	1901, 2082, 2145
TspGWI	ACGGA	1 cut(s)	411
TspRI	CASTG	3 cut(s)	1099, 1192, 1756
Van91I	CCANNNNNTGG	2 cut(s)	792, 2007
VneI	GTGCAC	1 cut(s)	216
VpaK11BI	GGWCC	4 cut(s)	435, 773, 1449, 1844
VspI	ATTAAT	1 cut(s)	903
XagI	CCTNNNNNAGG	1 cut(s)	1545
XapI	RAATTY	8 cut(s)	455, 702, 1198, 1434, 1462, 1801, 1830, 2392
XbaI	TCTAGA	3 cut(s)	1141, 1675, 1771
XceI	RCATGY	1 cut(s)	2356
XcmI	CCANNNNNNNNNTGG	3 cut(s)	789, 1482, 1892
XmnI	GAANNNNTTC	1 cut(s)	2089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.