Rorug02G0277100

Formiminotransferase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001919
Physical Location & Seq
Forward (+)
29844170 .. 29847649
3480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0277100.1

Sequence Viewer

Length: 2103 bp
ATGAAGAAGTACTTGGAGAAGAAGCAAAACGCAGAAAAAAGCAGCAGCAGCAGCACTCTGCAAACTCTCGCCATTTGTTCTTCCCTAGAGGCCACAGAGCACATAGGAGTGGGTTGTTTCTATGAGCTAGACCACTGCAAGCTTCCTCCTAAAGCTCCAGAGCAGCTCAAGTCTATTCGAATCGTTATGGTGAGCAAGAAGGCTTTGTTCAAGGTCTCGGTGAGGTTTCCGAGCATTCACTCTCTGCAAGCTTTTCTGAGCGAGAATGGGAATGTCGAGAACCAGCTTCCGGCGCTCGACGAGAAGTACTTGTTGGACCCGCAGACGGCGTCGGAGGTGCTTTACCGGCGGGTCCCGCCGGAGGAAATTTCGGACCGGAGCAAGGTGTGGAGCTTCTGGGCGGTGATTACGCGGCGTCGTTTTGAGAATCTGATCAGAGTTAACCCGGTGAAGAAGGCGCCTCGGTCTGAGATCAGTTTCAGTGGGTTGGTCCAGTGGGGCACTCGCAAGCGGGTTCGGTTCCTGAGCCCCAATCGGAGCCCGACGACTCCGATTCCGTCGAGCTCTGAAGAGAAGGAGATTGAGGGAGGTGGTGATGAGACGTCTGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTTGAGCCGAATGTGGTGGCGGTGAAGAATCGAAGGAGTGAAAGAAGAAAGCAGCCCATTAAGAGTCAGAAGAAGAAGAAGCCCAAACGTCAAGAACAGAGTAAGCAGATTGTGGTGCACAATGGGAGTGAGAAGAGAATGGTTAAAGCTTCAGTGGCAAGATGGTCTGCTGGGAGGTATAAGTTGGCAGAGGAGAGCATGTTGAAGGTAATGAAGGCAAGGGGGGCTACTGCTGGGAACCCAATAAGGAGACCGGATCTGAGAAATGAGGCCCGGAAGTTTATCGGCGACACGGGTTTGATTGACCATTTGCTCAAGCATATGGCTGGCAAGGTGGCTCCGGGTGGGGTTGATAGGTTTCAGAGGCGGCACAATGCTGATGGGGCAATGGAGTATTGGCTTGAGAGTGCTGATTTGGTTGAGATAAGGAAGGAGGCTGGGGTTCAAGACCCTTATTGGACTCCACCACAGGGGTGGAAGCCTGGTGATGACCCTACCCAAGACCCAACTTGTGCAGCAATGTTTAAGGAGCTGTGGGATGAGATAGCTAATCTGAAGAAGAGGGACAAGGAATCCAAGCAGCCAGAGCAGGGTTTAGCTATGGTGACCACCACCTCAAACTCTTGGTTGACAAGTATGGACTGGGACCAAGCTTACAGTTCAGTCATTCAGCTAAAGGACAAATATACACAACTAGCTGTCAGGACATCCAAGTTCGAAGAACAGATGCAGCAAGCTTCTCAAACTTTGTGTGGAATGGAGGAAGAAATTAAGGTACTGAAATCAACCATGGAAGCACCAGCAGCACCACTTATGTACTACTCAGAAGCAGCTGAAGTACCACAACTGACAGACAATGAAAGAGGGGTAAAAGAGGGCAAGGCAACAAAGCTAGAGAGACTGAGGAGTGGCTTCAAAATTTGCAGGCCACAGGGGACATTTATGTGGCCAAACATGAACCTGTCTATGTCTCAACACCAAATTGACCAGTCTGCGGTCCCAACCACACCCTCTGTTACCTCTTCCACAAGACCAGCAACCCAACTAGATCTAGTCCTTACTCAGTCTCCACATGGACCCAATCCAGGCTCAAGCTCAGGCTCCCTTGTTAAGCCATTTGCTGAGAGACGCCCAGTCAATACATCAACTCTGTTACGCAATGTGACTAACCCACCCTCTCTTTCTCATGCTTTTACTCAAGTACCATCTGAGATTGAGAAGACTGCCTCCCAGTCCCAGAGTGCCAAGACCCTTCAAATAAACCTCAATGAGATACCTGTTGATGCCCAACACAATGAATCTACTGCAATTTCTGGGACCCTTACCTACCAGAGAAGACATCAACTGATGAACGCCAGGAAAGAGAACAATGCAGATGCAAGGAAGGATAATATGAGCTTGAGAGGGCACTCCAAGTCTAAGCAGCAGCATGAGCATCATCAGCAAAGGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FTCD_N Yae1_N

Protein Analysis

700

Amino Acids

79.17

Weight (kDa)

9.1

Isoelectric Point (pI)

64.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_plant_repro PF25874 270 - 352 6.3e-25 Winged helix-turn-helix domain in plant reproductive proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 605
AccB1I GGYRCC 1 cut(s) 457
AccII CGCG 1 cut(s) 412
AciI CCGC 9 cut(s) 320, 349, 356, 401, 412, 511, 668, 1015, 1643
AclWI GGATC 1 cut(s) 912
AcoI YGGCCR 1 cut(s) 1595
AcsI RAATTY 2 cut(s) 366, 1566
AcuI CTGAAG 4 cut(s) 588, 783, 1223, 1503
AcyI GRCGYC 5 cut(s) 329, 415, 458, 602, 1777
AfaI GTAC 6 cut(s) 11, 308, 1425, 1466, 1488, 1851
AfiI CCNNNNNNNGG 8 cut(s) 289, 325, 361, 382, 1118, 1238, 1642, 1733
AgsI TTSAA 5 cut(s) 211, 853, 1094, 1564, 1904
AhdI GACNNNNNGTC 1 cut(s) 1781
AjnI CCWGG 3 cut(s) 1129, 1732, 2003
AjuI GAANNNNNNNTTGG 3 cut(s) 28, 296, 328
AleI CACNNNNGTG 1 cut(s) 1120
Alw21I GWGCWC 3 cut(s) 102, 566, 768
Alw26I GTCTC 7 cut(s) 220, 593, 892, 1540, 1623, 1719, 1768
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 1 cut(s) 912
AoxI GGCC 4 cut(s) 90, 918, 1574, 1595
ApaLI GTGCAC 1 cut(s) 764
ApoI RAATTY 2 cut(s) 366, 1566
AspLEI GCGC 2 cut(s) 295, 460
AspS9I GGNCC 9 cut(s) 316, 352, 373, 490, 919, 1294, 1645, 1724, 1965
AsuC2I CCSGG 3 cut(s) 446, 922, 990
AsuHPI GGTGA 8 cut(s) 202, 232, 415, 460, 605, 682, 1145, 1264
AsuII TTCGAA 2 cut(s) 178, 1365
AvaII GGWCC 8 cut(s) 316, 352, 373, 490, 1294, 1645, 1724, 1965
BaeGI GKGCMC 3 cut(s) 503, 768, 2058
BaeI ACNNNNGTAYC 2 cut(s) 1833, 1866
BalI TGGCCA 1 cut(s) 1597
BanI GGYRCC 1 cut(s) 457
BanII GRGCYC 3 cut(s) 530, 542, 566
BbsI GAAGAC 2 cut(s) 1874, 1990
Bbv12I GWGCWC 3 cut(s) 102, 566, 768
BccI CCATC 3 cut(s) 804, 1022, 1861
BceAI ACGGC 1 cut(s) 342
BciT130I CCWGG 3 cut(s) 1131, 1734, 2005
BclI TGATCA 1 cut(s) 432
BcnI CCSGG 3 cut(s) 446, 922, 990
BcoDI GTCTC 7 cut(s) 220, 593, 892, 1540, 1623, 1719, 1768
BfaI CTAG 6 cut(s) 86, 128, 1343, 1541, 1694, 1700
BfoI RGCGCY 2 cut(s) 296, 461
BglII AGATCT 1 cut(s) 1696
BmcAI AGTACT 2 cut(s) 11, 308
Bme1390I CCNGG 6 cut(s) 446, 922, 990, 1131, 1734, 2005
Bme18I GGWCC 8 cut(s) 316, 352, 373, 490, 1294, 1645, 1724, 1965
BmeRI GACNNNNNGTC 1 cut(s) 1781
BmgT120I GGNCC 9 cut(s) 316, 352, 373, 490, 919, 1294, 1645, 1724, 1965
BmrFI CCNGG 6 cut(s) 446, 922, 990, 1131, 1734, 2005
BmrI ACTGGG 3 cut(s) 1300, 1775, 1873
BmsI GCATC 4 cut(s) 1365, 1921, 2014, 2092
BmuI ACTGGG 3 cut(s) 1300, 1775, 1873
BpiI GAAGAC 2 cut(s) 1874, 1990
BpmI CTGGAG 1 cut(s) 141
Bpu10I CCTNAGC 2 cut(s) 524, 1744
Bpu14I TTCGAA 2 cut(s) 178, 1365
BpuEI CTTGAG 6 cut(s) 152, 947, 1070, 1723, 1830, 2068
BpuMI CCSGG 3 cut(s) 446, 922, 990
BsaHI GRCGYC 5 cut(s) 329, 415, 458, 602, 1777
BsaI GGTCTC 2 cut(s) 220, 892
BsaJI CCNNGG 2 cut(s) 461, 1437
BsaWI WCCGGW 2 cut(s) 375, 901
BsaXI ACNNNNNCTCC 4 cut(s) 833, 863, 1699, 1729
Bsc4I CCNNNNNNNGG 8 cut(s) 289, 325, 361, 382, 1118, 1238, 1642, 1733
Bse118I RCCGGY 1 cut(s) 345
Bse1I ACTGG 5 cut(s) 493, 1295, 1636, 1781, 1879
Bse3DI GCAATG 3 cut(s) 1041, 1173, 1813
BseBI CCWGG 3 cut(s) 1131, 1734, 2005
BseDI CCNNGG 2 cut(s) 461, 1437
BseGI GGATG 2 cut(s) 1192, 1355
BseLI CCNNNNNNNGG 8 cut(s) 289, 325, 361, 382, 1118, 1238, 1642, 1733
BseMI GCAATG 3 cut(s) 1041, 1173, 1813
BseNI ACTGG 5 cut(s) 493, 1295, 1636, 1781, 1879
BseRI GAGGAG 3 cut(s) 623, 854, 1567
BseSI GKGCMC 3 cut(s) 503, 768, 2058
BseYI CCCAGC 3 cut(s) 818, 881, 1085
BsgI GTGCAG 1 cut(s) 1182
Bsh1236I CGCG 1 cut(s) 412
BshFI GGCC 4 cut(s) 92, 920, 1576, 1597
BshNI GGYRCC 1 cut(s) 457
BsiHKAI GWGCWC 3 cut(s) 102, 566, 768
BsiSI CCGG 8 cut(s) 290, 346, 359, 376, 446, 902, 922, 989
BslFI GGGAC 7 cut(s) 338, 1226, 1307, 1597, 1631, 1867, 1978
BslI CCNNNNNNNGG 8 cut(s) 289, 325, 361, 382, 1118, 1238, 1642, 1733
BsmAI GTCTC 7 cut(s) 220, 593, 892, 1540, 1623, 1719, 1768
BsmBI CGTCTC 2 cut(s) 593, 1768
BsmFI GGGAC 7 cut(s) 338, 1226, 1307, 1597, 1631, 1867, 1978
BsmI GAATGC 1 cut(s) 234
BsnI GGCC 4 cut(s) 92, 920, 1576, 1597
Bso31I GGTCTC 2 cut(s) 220, 892
Bsp119I TTCGAA 2 cut(s) 178, 1365
Bsp1286I GDGCHC 7 cut(s) 102, 503, 530, 542, 566, 768, 2058
Bsp143I GATC 4 cut(s) 432, 471, 904, 1696
Bsp19I CCATGG 1 cut(s) 1437
BspACI CCGC 9 cut(s) 320, 349, 356, 401, 412, 511, 668, 1015, 1643
BspANI GGCC 4 cut(s) 92, 920, 1576, 1597
BspFNI CGCG 1 cut(s) 412
BspPI GGATC 1 cut(s) 912
BspT104I TTCGAA 2 cut(s) 178, 1365
BspT107I GGYRCC 1 cut(s) 457
BspTNI GGTCTC 2 cut(s) 220, 892
BsrDI GCAATG 3 cut(s) 1041, 1173, 1813
BsrFI RCCGGY 1 cut(s) 345
BsrI ACTGG 5 cut(s) 493, 1295, 1636, 1781, 1879
BssAI RCCGGY 1 cut(s) 345
BssECI CCNNGG 2 cut(s) 461, 1437
BssMI GATC 4 cut(s) 432, 471, 904, 1696
BssNI GRCGYC 5 cut(s) 329, 415, 458, 602, 1777
BssT1I CCWWGG 1 cut(s) 1437
Bst2UI CCWGG 3 cut(s) 1131, 1734, 2005
Bst4CI ACNGT 1 cut(s) 1307
Bst6I CTCTTC 5 cut(s) 564, 639, 776, 1202, 1675
BstACI GRCGYC 5 cut(s) 329, 415, 458, 602, 1777
BstBI TTCGAA 2 cut(s) 178, 1365
BstC8I GCNNGC 6 cut(s) 140, 249, 509, 976, 1383, 1574
BstDSI CCRYGG 1 cut(s) 1437
BstEII GGTNACC 1 cut(s) 1252
BstF5I GGATG 2 cut(s) 1192, 1355
BstFNI CGCG 1 cut(s) 412
BstH2I RGCGCY 2 cut(s) 296, 461
BstHHI GCGC 2 cut(s) 295, 460
BstKTI GATC 4 cut(s) 435, 474, 907, 1699
BstMAI GTCTC 7 cut(s) 220, 593, 892, 1540, 1623, 1719, 1768
BstMBI GATC 4 cut(s) 432, 471, 904, 1696
BstNI CCWGG 3 cut(s) 1131, 1734, 2005
BstNSI RCATGY 1 cut(s) 850
BstPI GGTNACC 1 cut(s) 1252
BstSCI CCNGG 6 cut(s) 444, 920, 988, 1129, 1732, 2003
BstSLI GKGCMC 3 cut(s) 503, 768, 2058
BstUI CGCG 1 cut(s) 412
BstV2I GAAGAC 2 cut(s) 1874, 1990
BstX2I RGATCY 2 cut(s) 904, 1696
BstXI CCANNNNNNTGG 1 cut(s) 1122
BstYI RGATCY 2 cut(s) 904, 1696
BsuRI GGCC 4 cut(s) 92, 920, 1576, 1597
BtgI CCRYGG 1 cut(s) 1437
BtsCI GGATG 2 cut(s) 1192, 1355
BtsI GCAGTG 1 cut(s) 133
BtsIMutI CAGTG 4 cut(s) 133, 487, 500, 807
Cac8I GCNNGC 6 cut(s) 140, 249, 509, 976, 1383, 1574
CfoI GCGC 2 cut(s) 295, 460
Cfr10I RCCGGY 1 cut(s) 345
Cfr13I GGNCC 9 cut(s) 316, 352, 373, 490, 919, 1294, 1645, 1724, 1965
CpoI CGGWCCG 1 cut(s) 373
CseI GACGC 3 cut(s) 318, 404, 1785
Csp6I GTAC 6 cut(s) 10, 307, 1424, 1465, 1487, 1850
CspI CGGWCCG 1 cut(s) 373
CviAII CATG 6 cut(s) 847, 1438, 1603, 1721, 1835, 2078
CviQI GTAC 6 cut(s) 10, 307, 1424, 1465, 1487, 1850
DinI GGCGCC 1 cut(s) 459
DpnI GATC 4 cut(s) 434, 473, 906, 1698
DpnII GATC 4 cut(s) 432, 471, 904, 1696
DriI GACNNNNNGTC 1 cut(s) 1781
EaeI YGGCCR 1 cut(s) 1595
Eam1104I CTCTTC 5 cut(s) 564, 639, 776, 1202, 1675
Eam1105I GACNNNNNGTC 1 cut(s) 1781
EarI CTCTTC 5 cut(s) 564, 639, 776, 1202, 1675
Ecl136II GAGCTC 1 cut(s) 564
Eco130I CCWWGG 1 cut(s) 1437
Eco24I GRGCYC 3 cut(s) 530, 542, 566
Eco31I GGTCTC 2 cut(s) 220, 892
Eco47I GGWCC 8 cut(s) 316, 352, 373, 490, 1294, 1645, 1724, 1965
Eco53kI GAGCTC 1 cut(s) 564
Eco57I CTGAAG 4 cut(s) 588, 783, 1223, 1503
Eco91I GGTNACC 1 cut(s) 1252
EcoICRI GAGCTC 1 cut(s) 564
EcoO109I RGGNCCY 2 cut(s) 352, 1965
EcoO65I GGTNACC 1 cut(s) 1252
EcoRII CCWGG 3 cut(s) 1129, 1732, 2003
EcoT14I CCWWGG 1 cut(s) 1437
EcoT38I GRGCYC 3 cut(s) 530, 542, 566
EgeI GGCGCC 1 cut(s) 459
EheI GGCGCC 1 cut(s) 459
ErhI CCWWGG 1 cut(s) 1437
Esp3I CGTCTC 2 cut(s) 593, 1768
FaeI CATG 6 cut(s) 850, 1441, 1606, 1724, 1838, 2081
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 7 cut(s) 338, 1226, 1307, 1597, 1631, 1867, 1978
FatI CATG 6 cut(s) 846, 1437, 1602, 1720, 1834, 2077
FauI CCCGC 4 cut(s) 327, 342, 363, 504
FauNDI CATATG 1 cut(s) 969
FbaI TGATCA 1 cut(s) 432
FokI GGATG 2 cut(s) 1199, 1342
FriOI GRGCYC 3 cut(s) 530, 542, 566
FspBI CTAG 6 cut(s) 86, 128, 1343, 1541, 1694, 1700
GlaI GCGC 2 cut(s) 294, 459
GsaI CCCAGC 3 cut(s) 822, 885, 1089
GsuI CTGGAG 1 cut(s) 141
HaeII RGCGCY 2 cut(s) 296, 461
HaeIII GGCC 4 cut(s) 92, 920, 1576, 1597
HapII CCGG 8 cut(s) 290, 346, 359, 376, 446, 902, 922, 989
HgaI GACGC 3 cut(s) 318, 404, 1785
HhaI GCGC 2 cut(s) 295, 460
Hin1I GRCGYC 5 cut(s) 329, 415, 458, 602, 1777
Hin1II CATG 6 cut(s) 850, 1441, 1606, 1724, 1838, 2081
Hin6I GCGC 2 cut(s) 293, 458
HinP1I GCGC 2 cut(s) 293, 458
HincII GTYRAC 2 cut(s) 442, 1278
HindII GTYRAC 2 cut(s) 442, 1278
HindIII AAGCTT 5 cut(s) 140, 249, 795, 1299, 1383
HinfI GANTC 9 cut(s) 180, 427, 547, 553, 676, 712, 1108, 1220, 1946
HpaI GTTAAC 1 cut(s) 442
HpaII CCGG 8 cut(s) 290, 346, 359, 376, 446, 902, 922, 989
HphI GGTGA 8 cut(s) 202, 232, 415, 460, 605, 682, 1145, 1264
Hpy166II GTNNAC 3 cut(s) 442, 766, 1278
Hpy188III TCNNGA 6 cut(s) 158, 277, 523, 740, 1094, 1351
Hpy8I GTNNAC 3 cut(s) 442, 766, 1278
Hpy99I CGWCG 5 cut(s) 302, 334, 420, 547, 562
HpyAV CCTTC 9 cut(s) 193, 448, 568, 675, 847, 856, 1072, 1910, 2026
HpyCH4III ACNGT 1 cut(s) 1307
HpyCH4IV ACGT 2 cut(s) 602, 736
HpySE526I ACGT 2 cut(s) 602, 736
Hsp92I GRCGYC 5 cut(s) 329, 415, 458, 602, 1777
Hsp92II CATG 6 cut(s) 850, 1441, 1606, 1724, 1838, 2081
HspAI GCGC 2 cut(s) 293, 458
KasI GGCGCC 1 cut(s) 457
KflI GGGWCCC 2 cut(s) 352, 1965
Ksp22I TGATCA 1 cut(s) 432
KspAI GTTAAC 1 cut(s) 442
Kzo9I GATC 4 cut(s) 432, 471, 904, 1696
LmnI GCTCC 7 cut(s) 160, 378, 390, 537, 991, 1177, 1754
LweI GCATC 4 cut(s) 1365, 1921, 2014, 2092
MaeI CTAG 6 cut(s) 86, 128, 1343, 1541, 1694, 1700
MaeII ACGT 2 cut(s) 602, 736
MaeIII GTNAC 4 cut(s) 1252, 1663, 1800, 1810
MalI GATC 4 cut(s) 434, 473, 906, 1698
MboI GATC 4 cut(s) 432, 471, 904, 1696
MflI RGATCY 2 cut(s) 904, 1696
MhlI GDGCHC 7 cut(s) 102, 503, 530, 542, 566, 768, 2058
MlsI TGGCCA 1 cut(s) 1597
MluCI AATT 5 cut(s) 366, 1416, 1566, 1629, 1956
MluNI TGGCCA 1 cut(s) 1597
Mly113I GGCGCC 1 cut(s) 458
MlyI GAGTC 3 cut(s) 541, 721, 1102
MmeI TCCRAC 2 cut(s) 294, 312
Mox20I TGGCCA 1 cut(s) 1597
MscI TGGCCA 1 cut(s) 1597
MseI TTAA 6 cut(s) 441, 708, 792, 1173, 1419, 1758
MslI CAYNNNNRTG 3 cut(s) 107, 1120, 1591
Msp20I TGGCCA 1 cut(s) 1597
MspA1I CMGCKG 1 cut(s) 1481
MspI CCGG 8 cut(s) 290, 346, 359, 376, 446, 902, 922, 989
MspR9I CCNGG 6 cut(s) 446, 922, 990, 1131, 1734, 2005
Mva1269I GAATGC 1 cut(s) 234
MvaI CCWGG 3 cut(s) 1131, 1734, 2005
MvnI CGCG 1 cut(s) 412
NarI GGCGCC 1 cut(s) 458
NciI CCSGG 3 cut(s) 446, 922, 990
NcoI CCATGG 1 cut(s) 1437
NdeI CATATG 1 cut(s) 969
NdeII GATC 4 cut(s) 432, 471, 904, 1696
NlaIII CATG 6 cut(s) 850, 1441, 1606, 1724, 1838, 2081
NmuCI GTSAC 2 cut(s) 1252, 1810
NspI RCATGY 1 cut(s) 850
NspV TTCGAA 2 cut(s) 178, 1365
OliI CACNNNNGTG 1 cut(s) 1120
PctI GAATGC 1 cut(s) 234
PfeI GAWTC 6 cut(s) 180, 427, 553, 676, 1220, 1946
PflFI GACNNNGTC 1 cut(s) 328
PleI GAGTC 3 cut(s) 541, 720, 1102
PluTI GGCGCC 1 cut(s) 461
PpsI GAGTC 3 cut(s) 541, 720, 1102
PpuMI RGGWCCY 2 cut(s) 352, 1965
Psp124BI GAGCTC 1 cut(s) 566
Psp5II RGGWCCY 2 cut(s) 352, 1965
Psp6I CCWGG 3 cut(s) 1129, 1732, 2003
PspEI GGTNACC 1 cut(s) 1252
PspFI CCCAGC 3 cut(s) 818, 881, 1085
PspGI CCWGG 3 cut(s) 1129, 1732, 2003
PspPI GGNCC 9 cut(s) 316, 352, 373, 490, 919, 1294, 1645, 1724, 1965
PspPPI RGGWCCY 2 cut(s) 352, 1965
PsuI RGATCY 2 cut(s) 904, 1696
PsyI GACNNNGTC 1 cut(s) 328
PvuII CAGCTG 1 cut(s) 1481
RsaI GTAC 6 cut(s) 11, 308, 1425, 1466, 1488, 1851
RsaNI GTAC 6 cut(s) 10, 307, 1424, 1465, 1487, 1850
RseI CAYNNNNRTG 3 cut(s) 107, 1120, 1591
Rsr2I CGGWCCG 1 cut(s) 373
RsrII CGGWCCG 1 cut(s) 373
SacI GAGCTC 1 cut(s) 566
SaqAI TTAA 6 cut(s) 441, 708, 792, 1173, 1419, 1758
Sau3AI GATC 4 cut(s) 432, 471, 904, 1696
Sau96I GGNCC 9 cut(s) 316, 352, 373, 490, 919, 1294, 1645, 1724, 1965
ScaI AGTACT 2 cut(s) 11, 308
SchI GAGTC 3 cut(s) 541, 721, 1102
ScrFI CCNGG 6 cut(s) 446, 922, 990, 1131, 1734, 2005
SduI GDGCHC 7 cut(s) 102, 503, 530, 542, 566, 768, 2058
SfaNI GCATC 4 cut(s) 1365, 1921, 2014, 2092
SfoI GGCGCC 1 cut(s) 459
SfuI TTCGAA 2 cut(s) 178, 1365
SinI GGWCC 8 cut(s) 316, 352, 373, 490, 1294, 1645, 1724, 1965
SmiMI CAYNNNNRTG 3 cut(s) 107, 1120, 1591
SmlI CTYRAG 6 cut(s) 167, 962, 1049, 1738, 1845, 2047
SmoI CTYRAG 6 cut(s) 167, 962, 1049, 1738, 1845, 2047
Sse9I AATT 5 cut(s) 366, 1416, 1566, 1629, 1956
SsiI CCGC 9 cut(s) 320, 349, 356, 401, 412, 511, 668, 1015, 1643
SspDI GGCGCC 1 cut(s) 457
SspMI CTAG 6 cut(s) 86, 128, 1343, 1541, 1694, 1700
SstI GAGCTC 1 cut(s) 566
StyD4I CCNGG 6 cut(s) 444, 920, 988, 1129, 1732, 2003
StyI CCWWGG 1 cut(s) 1437
TaaI ACNGT 1 cut(s) 1307
TaiI ACGT 2 cut(s) 605, 739
TaqI TCGA 6 cut(s) 178, 276, 297, 560, 679, 1365
TaqII GACCGA 1 cut(s) 453
TasI AATT 5 cut(s) 366, 1416, 1566, 1629, 1956
TatI WGTACW 3 cut(s) 9, 306, 1464
TauI GCSGC 2 cut(s) 415, 1018
TfiI GAWTC 6 cut(s) 180, 427, 553, 676, 1220, 1946
Tru1I TTAA 6 cut(s) 441, 708, 792, 1173, 1419, 1758
Tru9I TTAA 6 cut(s) 441, 708, 792, 1173, 1419, 1758
TscAI CASTG 4 cut(s) 140, 487, 500, 807
TseFI GTSAC 2 cut(s) 1252, 1810
Tsp45I GTSAC 2 cut(s) 1252, 1810
TspDTI ATGAA 6 cut(s) 17, 875, 1521, 1619, 1959, 2012
TspGWI ACGGA 1 cut(s) 546
TspRI CASTG 4 cut(s) 140, 487, 500, 807
Tth111I GACNNNGTC 1 cut(s) 328
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 8 cut(s) 316, 352, 373, 490, 1294, 1645, 1724, 1965
XapI RAATTY 2 cut(s) 366, 1566
XceI RCATGY 1 cut(s) 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 1119
XspI CTAG 6 cut(s) 86, 128, 1343, 1541, 1694, 1700
ZraI GACGTC 1 cut(s) 603
ZrmI AGTACT 2 cut(s) 11, 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.