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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06010 |
| fragaria_vesca | FvH4_6g00460 |
| malus_domestica | MD04G1245200.v1.1 MD09G1092600.v1.1 MD12G1086700.v1.1 MD17G1082700.v1.1 |
| prunus_persica | Prupe.6G361800_v2.0.a1 Prupe.6G361800_v2.0.a1 |
| pyrus_communis | pycom04g21590 pycom12g23890 |
| rosa_chinensis | RchiOBHm_Chr2g0127151 RchiOBHm_Chr3g0447831 |
| rosa_laevigata | RLG00000015762 RLG00000018977 RLG00000018978 RLG00000021317 |
| rosa_multiflora | Rmu_sc0005601.1_g000003 Rmu_sc0021156.1_g000003 Rmu_sc0026966.1_g000003 Rmu_ssc0000018.1_g000076 |
| rosa_roxburghii | Rroxscaffold_2G00154490 Rroxscaffold_6G00426040 |
| rosa_rugosa | Rorug02G0277000 Rorug02G0277100 Rorug02G0277200 Rorug02G0494200 Rorug02G0606200 Rorug02G0606300 Rorug02G0606400 |
| rosa_samantha | Rh2AG327600 Rh2AG327700 Rh2AG560300 Rh2BG337700 Rh2BG573600 Rh2CG314600 Rh2CG543900 Rh2DG354600 Rh2DG354800 Rh2DG583600 Rh3AG005600 Rh3BG005300 Rh3CG005500 Rh3DG005800 |
| rosa_wichuraiana | Rw0G013430 Rw2G026580 Rw3G000420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 66 |
| AciI | CCGC | 2 cut(s) | 64, 98 |
| AclWI | GGATC | 1 cut(s) | 388 |
| AcoI | YGGCCR | 1 cut(s) | 389 |
| AcuI | CTGAAG | 1 cut(s) | 464 |
| AcyI | GRCGYC | 1 cut(s) | 141 |
| AfaI | GTAC | 1 cut(s) | 50 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 103, 104 |
| AgsI | TTSAA | 2 cut(s) | 230, 373 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 84, 116 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 453, 485 |
| AluBI | AGCT | 3 cut(s) | 154, 226, 476 |
| AluI | AGCT | 3 cut(s) | 154, 226, 476 |
| Alw26I | GTCTC | 2 cut(s) | 104, 254 |
| AlwI | GGATC | 1 cut(s) | 388 |
| AoxI | GGCC | 1 cut(s) | 389 |
| ApeKI | GCWGC | 1 cut(s) | 223 |
| AspLEI | GCGC | 1 cut(s) | 79 |
| BbsI | GAAGAC | 1 cut(s) | 63 |
| BbvCI | CCTCAGC | 1 cut(s) | 150 |
| BbvI | GCAGC | 1 cut(s) | 235 |
| BcoDI | GTCTC | 2 cut(s) | 104, 254 |
| BfaI | CTAG | 1 cut(s) | 473 |
| BisI | GCNGC | 2 cut(s) | 64, 224 |
| BlsI | GCNGC | 2 cut(s) | 65, 225 |
| BmsI | GCATC | 1 cut(s) | 475 |
| BpiI | GAAGAC | 1 cut(s) | 63 |
| Bpu10I | CCTNAGC | 1 cut(s) | 150 |
| BsaHI | GRCGYC | 1 cut(s) | 141 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 103, 104 |
| BseGI | GGATG | 1 cut(s) | 490 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 103, 104 |
| BseMII | CTCAG | 1 cut(s) | 164 |
| BseXI | GCAGC | 1 cut(s) | 235 |
| Bsh1236I | CGCG | 1 cut(s) | 66 |
| BshFI | GGCC | 1 cut(s) | 391 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 103, 104 |
| BsmAI | GTCTC | 2 cut(s) | 104, 254 |
| BsmBI | CGTCTC | 1 cut(s) | 254 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsnI | GGCC | 1 cut(s) | 391 |
| Bsp143I | GATC | 2 cut(s) | 393, 400 |
| BspACI | CCGC | 2 cut(s) | 64, 98 |
| BspANI | GGCC | 1 cut(s) | 391 |
| BspCNI | CTCAG | 1 cut(s) | 163 |
| BspFNI | CGCG | 1 cut(s) | 66 |
| BspPI | GGATC | 1 cut(s) | 388 |
| BspQI | GCTCTTC | 1 cut(s) | 483 |
| BssMI | GATC | 2 cut(s) | 393, 400 |
| BssNI | GRCGYC | 1 cut(s) | 141 |
| Bst4CI | ACNGT | 2 cut(s) | 352, 439 |
| Bst6I | CTCTTC | 1 cut(s) | 483 |
| BstACI | GRCGYC | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 1 cut(s) | 98 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstF5I | GGATG | 1 cut(s) | 490 |
| BstFNI | CGCG | 1 cut(s) | 66 |
| BstHHI | GCGC | 1 cut(s) | 79 |
| BstKTI | GATC | 2 cut(s) | 396, 403 |
| BstMAI | GTCTC | 2 cut(s) | 104, 254 |
| BstMBI | GATC | 2 cut(s) | 393, 400 |
| BstUI | CGCG | 1 cut(s) | 66 |
| BstV1I | GCAGC | 1 cut(s) | 235 |
| BstV2I | GAAGAC | 1 cut(s) | 63 |
| BsuRI | GGCC | 1 cut(s) | 391 |
| BtsCI | GGATG | 1 cut(s) | 490 |
| BtsIMutI | CAGTG | 1 cut(s) | 435 |
| Cac8I | GCNNGC | 1 cut(s) | 98 |
| CfoI | GCGC | 1 cut(s) | 79 |
| CseI | GACGC | 1 cut(s) | 149 |
| Csp6I | GTAC | 1 cut(s) | 49 |
| CviAII | CATG | 1 cut(s) | 404 |
| CviJI | RGCY | 6 cut(s) | 41, 154, 226, 391, 449, 476 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 154, 226, 391, 449, 476 |
| CviQI | GTAC | 1 cut(s) | 49 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| DpnI | GATC | 2 cut(s) | 395, 402 |
| DpnII | GATC | 2 cut(s) | 393, 400 |
| EaeI | YGGCCR | 1 cut(s) | 389 |
| Eam1104I | CTCTTC | 1 cut(s) | 483 |
| EarI | CTCTTC | 1 cut(s) | 483 |
| Eco57I | CTGAAG | 1 cut(s) | 464 |
| Esp3I | CGTCTC | 1 cut(s) | 254 |
| FaeI | CATG | 1 cut(s) | 407 |
| FaiI | YATR | 4 cut(s) | 339, 405, 428, 492 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FatI | CATG | 1 cut(s) | 403 |
| FauI | CCCGC | 1 cut(s) | 105 |
| Fnu4HI | GCNGC | 2 cut(s) | 64, 224 |
| FokI | GGATG | 1 cut(s) | 497 |
| Fsp4HI | GCNGC | 2 cut(s) | 64, 224 |
| FspBI | CTAG | 1 cut(s) | 473 |
| GlaI | GCGC | 1 cut(s) | 78 |
| GluI | GCNGC | 2 cut(s) | 64, 224 |
| HaeIII | GGCC | 1 cut(s) | 391 |
| HgaI | GACGC | 1 cut(s) | 149 |
| HhaI | GCGC | 1 cut(s) | 79 |
| Hin1I | GRCGYC | 1 cut(s) | 141 |
| Hin1II | CATG | 1 cut(s) | 407 |
| Hin6I | GCGC | 1 cut(s) | 77 |
| HinP1I | GCGC | 1 cut(s) | 77 |
| HincII | GTYRAC | 1 cut(s) | 442 |
| HindII | GTYRAC | 1 cut(s) | 442 |
| HpaI | GTTAAC | 1 cut(s) | 442 |
| Hpy166II | GTNNAC | 3 cut(s) | 309, 442, 461 |
| Hpy188I | TCNGA | 3 cut(s) | 123, 331, 366 |
| Hpy188III | TCNNGA | 1 cut(s) | 482 |
| Hpy8I | GTNNAC | 3 cut(s) | 309, 442, 461 |
| HpyAV | CCTTC | 1 cut(s) | 245 |
| HpyCH4III | ACNGT | 2 cut(s) | 352, 439 |
| HpyCH4IV | ACGT | 1 cut(s) | 444 |
| HpyCH4V | TGCA | 1 cut(s) | 36 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| HpySE526I | ACGT | 1 cut(s) | 444 |
| Hsp92I | GRCGYC | 1 cut(s) | 141 |
| Hsp92II | CATG | 1 cut(s) | 407 |
| HspAI | GCGC | 1 cut(s) | 77 |
| KspAI | GTTAAC | 1 cut(s) | 442 |
| Kzo9I | GATC | 2 cut(s) | 393, 400 |
| LguI | GCTCTTC | 1 cut(s) | 483 |
| LpnPI | CCDG | 3 cut(s) | 59, 99, 467 |
| Lsp1109I | GCAGC | 1 cut(s) | 235 |
| LweI | GCATC | 1 cut(s) | 475 |
| MaeI | CTAG | 1 cut(s) | 473 |
| MaeII | ACGT | 1 cut(s) | 444 |
| MalI | GATC | 2 cut(s) | 395, 402 |
| MboI | GATC | 2 cut(s) | 393, 400 |
| MboII | GAAGA | 4 cut(s) | 63, 212, 385, 470 |
| MluCI | AATT | 3 cut(s) | 31, 176, 314 |
| MnlI | CCTC | 3 cut(s) | 159, 277, 407 |
| MseI | TTAA | 3 cut(s) | 26, 347, 441 |
| MvnI | CGCG | 1 cut(s) | 66 |
| NdeII | GATC | 2 cut(s) | 393, 400 |
| NlaIII | CATG | 1 cut(s) | 407 |
| PciSI | GCTCTTC | 1 cut(s) | 483 |
| PkrI | GCNGC | 2 cut(s) | 65, 225 |
| RsaI | GTAC | 1 cut(s) | 50 |
| RsaNI | GTAC | 1 cut(s) | 49 |
| SapI | GCTCTTC | 1 cut(s) | 483 |
| SaqAI | TTAA | 3 cut(s) | 26, 347, 441 |
| SatI | GCNGC | 2 cut(s) | 64, 224 |
| Sau3AI | GATC | 2 cut(s) | 393, 400 |
| SetI | ASST | 8 cut(s) | 48, 151, 156, 228, 347, 447, 478, 498 |
| SfaNI | GCATC | 1 cut(s) | 475 |
| Sse9I | AATT | 3 cut(s) | 31, 176, 314 |
| SsiI | CCGC | 2 cut(s) | 64, 98 |
| SspMI | CTAG | 1 cut(s) | 473 |
| TaaI | ACNGT | 2 cut(s) | 352, 439 |
| TaiI | ACGT | 1 cut(s) | 447 |
| TaqI | TCGA | 1 cut(s) | 399 |
| TasI | AATT | 3 cut(s) | 31, 176, 314 |
| TauI | GCSGC | 1 cut(s) | 66 |
| Tru1I | TTAA | 3 cut(s) | 26, 347, 441 |
| Tru9I | TTAA | 3 cut(s) | 26, 347, 441 |
| TscAI | CASTG | 1 cut(s) | 442 |
| TseI | GCWGC | 1 cut(s) | 223 |
| TspGWI | ACGGA | 1 cut(s) | 278 |
| TspRI | CASTG | 1 cut(s) | 442 |
| XspI | CTAG | 1 cut(s) | 473 |