Rorug03G0034500
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0004586
Physical Location & Seq
Reverse (-)
2760040 .. 2768025
7986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0034500.1

Sequence Viewer

Length: 2196 bp
ATGTGGCTTAACCCTGTATCGTCGTGCTTCCCGAATCTAAAACCCTACTCCTACTCCTCTTCAACTCCTCCACCACCACCAACCACCACCGTGAAAGCTCTGATGGCCATGAAGACTACGGAGGAATCCGACGTCGGAATATTCTGTTACATCTCTCAACTCCCTGGCTTTCGCGGCATTCTTAAGCAAAGGTATTCTGATTTCATGGTGAATGAAGTCGATACCGAAGGAAATGTGGTTCATTTGACCAACTTGGAAGCTCCACCAGAGGTGGTGAAGGAAAATGGAGCGAAGACGCAGGATAGTAGTGCAAGTAAAGATTATAGTGCTGAAATCGAAAAGTTTAGGTCTCTTGCTGGTGGTGAGGATGTTGAGCGATTGGAAGGTTTGATCAGCCAGATTAATTCTGGAAGTGAAGATGGTGTTATGCCTATTGTTCTTTCGCCAGACTATGATAAAGCTCATCGAACGGCAGTGCATAATTTTTTTAAGGAGAACTTAAAGTTCCTTGTCACCGATGCAGTGGATGGACCGGATGCTTCGTCAAAATGCATCCGTGTAAGACTAAATTCAGGAGGGCAGAATGGCAGAGGCAGGAATTCGAAAAAGCGAAAAGAAAGGGGTGATAAACCATTTGATAGCAGAGGTACTGATGACTGGTCAGAGCATGTTGGCAAGTTCCTAAGGTTTCATCTTTACAAGGAGAACAAGGATACACAGGAAGCTTTAGGAATTATAGGAAAGATGCTTGGAATACAGCCAAGGGCATTTGGGTTTGCGGGTACAAAGGATAAGCGTGCTGTTTCAAGTCAAAGGGTAACCGTCTTTAAGCAGTTTGCAAGTAGATTAGCTGCTCTTAATGATAGGTTGATTGGTATCAAAGTAGGCGACTTTTGCTATGTGAAAGAAGGACTTTCTCTTGGCCAACTCCTGGGAAACCGCTTTACAATTACATTGAGAGGAGTTGTTGCAGATTCTGAAGATACGATCCACGCATCTGCAAATGCCTTAGGAAAACAGGGATTTGTTAACTACTTTGGTTTACAAAGGTTTGGAAGTGGTTCAGTTCCAACACACCTTATTGGAGCTTCACTACTGAGAGGAGAGTGGAAATCTACTGTAAGCATGATGCTTGAACCGAGAGAAGGGGAAAGAGATGTGATAACGGAGGCACGGAAGTACTACAAGGAAACTAATGATATTGATGGGACCTTGAGGAAATTACCTCGACATCTTGTTGCTGAAAGAGCTATCCTGCAGTGTCTGAAGAAATGTCCTGGAAACTACTCTCAGGCTCTGAAAGCTATTCCCAGAACTTTGAGGATGATGTATGTACATAGTTACCAGAGCTATTTGTGGAACCATGCAGCAAGTATGAGAGTGCAAAAATATGGAACTGACCGAGTTGTGGTGGGAGACTTGGTATATTGTAAAGGAAATGAAACTGAGAAGGTGATAGGAATTGTTAGTTCTGAGTGTGTGGATGAAAATGTTAATGATGAAAACTGTGATGATACATTTGATCCTAGTCATTTGGACGACATATCAGAAACAAATATTCCTGAGGCGAGGGTTAATGTTGTAAAGGCTGTAACTGCAGAAGATATCGACAACGGGAATTACACGATTGATGATATTGTCCTTCCTCTGCCAGGATCAAGGGTCATCTTTCCAGAAAATGATATTGCTGCTGTTTTTCATGATCTAGCAAAGAAGGATGCGATCAGCTTGACAGAGAGCGTGCATAATGTCAAGGAATTCTCAATAACGAATGTGACTGGAAGTTACAGGCGGGTCTTCCAAAAACCAATGGACTTTGAATGGGAATTACTAAAGTATATTGATGGCAATATACCATTGGTGGAGACAGACTTTGAAAAAATTGACAAAACCAAGCCTGTGAATGTACACAAAGAGGACCCAACAAGTGTAAATGGAGATGGAAGTTTACATGATAGCATCAAACAGTCAGAGTGCTCTGCCAATGAAATAGAACTGCAGAAAAGAGATATTGAGGTGGAAGACAAGGGAGAAAAGTTGCCACAAGTTGAATCTCTCGGTGGCACTAATTCTCAGGGAACTCAGATTGCTCTGAAGTTGAGCTTTACTCTCCCATCATCTTGTTATGCAACAATGGCCATCAGAGAGCTACTGAAGACTTCGACATCTGTTGCTTTTCACAAAACCTTGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 Pkinase_Tyr

Protein Analysis

731

Amino Acids

81.21

Weight (kDa)

5.98

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TruD PF01142 221 - 483 1.4e-70 tRNA pseudouridine synthase D (TruD)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 135
AccB7I CCANNNNNTGG 1 cut(s) 931
AccII CGCG 1 cut(s) 174
AciI CCGC 4 cut(s) 174, 779, 940, 1792
AclWI GGATC 3 cut(s) 982, 1517, 1663
AcoI YGGCCR 3 cut(s) 105, 922, 2136
AcsI RAATTY 3 cut(s) 568, 598, 1757
AcuI CTGAAG 4 cut(s) 999, 1286, 2114, 2174
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 5 cut(s) 649, 784, 1181, 1335, 1908
AfiI CCNNNNNNNGG 4 cut(s) 931, 1145, 1408, 1652
AflII CTTAAG 1 cut(s) 182
AgsI TTSAA 7 cut(s) 63, 807, 1136, 1820, 1877, 2051, 2191
AjnI CCWGG 4 cut(s) 163, 930, 1276, 1651
AleI CACNNNNGTG 1 cut(s) 89
AloI GAACNNNNNNTCC 2 cut(s) 222, 254
Alw21I GWGCWC 1 cut(s) 1979
Alw26I GTCTC 3 cut(s) 354, 1410, 1859
AlwI GGATC 3 cut(s) 982, 1517, 1663
AlwNI CAGNNNCTG 3 cut(s) 977, 1264, 1297
AoxI GGCC 3 cut(s) 105, 922, 2136
ApeKI GCWGC 3 cut(s) 851, 1367, 1688
ApoI RAATTY 3 cut(s) 568, 598, 1757
AseI ATTAAT 1 cut(s) 402
Asp700I GAANNNNTTC 1 cut(s) 1060
AspS9I GGNCC 3 cut(s) 530, 1209, 1918
AsuHPI GGTGA 6 cut(s) 220, 286, 374, 505, 635, 1465
AsuII TTCGAA 1 cut(s) 602
AvaII GGWCC 3 cut(s) 530, 1209, 1918
AxyI CCTNAGG 3 cut(s) 683, 1009, 1563
BalI TGGCCA 3 cut(s) 107, 924, 2138
BbsI GAAGAC 5 cut(s) 119, 299, 1789, 2028, 2162
Bbv12I GWGCWC 1 cut(s) 1979
BbvI GCAGC 3 cut(s) 838, 1379, 1675
BccI CCATC 8 cut(s) 97, 413, 521, 1199, 1838, 1934, 2122, 2147
BceAI ACGGC 1 cut(s) 486
BciT130I CCWGG 4 cut(s) 165, 932, 1278, 1653
BciVI GTATCC 1 cut(s) 706
BclI TGATCA 1 cut(s) 390
BcoDI GTCTC 3 cut(s) 354, 1410, 1859
BfaI CTAG 3 cut(s) 1527, 1706, 2194
BfmI CTRYAG 3 cut(s) 1256, 1596, 1997
BfrI CTTAAG 1 cut(s) 182
BfuI GTATCC 1 cut(s) 706
BisI GCNGC 4 cut(s) 175, 852, 1368, 1689
BlsI GCNGC 4 cut(s) 176, 853, 1369, 1690
BmcAI AGTACT 1 cut(s) 1181
Bme1390I CCNGG 4 cut(s) 165, 932, 1278, 1653
Bme18I GGWCC 3 cut(s) 530, 1209, 1918
BmgT120I GGNCC 3 cut(s) 530, 1209, 1918
BmiI GGNNCC 3 cut(s) 1210, 1361, 1920
BmrFI CCNGG 4 cut(s) 165, 932, 1278, 1653
BmsI GCATC 8 cut(s) 508, 526, 561, 735, 1004, 1119, 1708, 1968
BpiI GAAGAC 5 cut(s) 119, 299, 1789, 2028, 2162
BplI GAGNNNNNCTC 2 cut(s) 2092, 2124
Bpu14I TTCGAA 1 cut(s) 602
BpuEI CTTGAG 1 cut(s) 1234
BsaBI GATNNNNATC 1 cut(s) 875
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 1 cut(s) 354
BsaJI CCNNGG 3 cut(s) 163, 761, 931
BsaWI WCCGGW 1 cut(s) 532
BsaXI ACNNNNNCTCC 4 cut(s) 38, 68, 1407, 1437
Bsc4I CCNNNNNNNGG 4 cut(s) 931, 1145, 1408, 1652
Bse1I ACTGG 2 cut(s) 662, 1783
Bse21I CCTNAGG 3 cut(s) 683, 1009, 1563
Bse8I GATNNNNATC 1 cut(s) 875
BseBI CCWGG 4 cut(s) 165, 932, 1278, 1653
BseDI CCNNGG 3 cut(s) 163, 761, 931
BseGI GGATG 7 cut(s) 373, 532, 541, 552, 1329, 1489, 1723
BseJI GATNNNNATC 1 cut(s) 875
BseLI CCNNNNNNNGG 4 cut(s) 931, 1145, 1408, 1652
BseMII CTCAG 7 cut(s) 1088, 1304, 1437, 1464, 1554, 2087, 2096
BseNI ACTGG 2 cut(s) 662, 1783
BseRI GAGGAG 4 cut(s) 46, 57, 975, 1116
BseXI GCAGC 3 cut(s) 838, 1379, 1675
Bsh1236I CGCG 1 cut(s) 174
BshFI GGCC 3 cut(s) 107, 924, 2138
BsiHKAI GWGCWC 1 cut(s) 1979
BsiSI CCGG 1 cut(s) 533
BslFI GGGAC 1 cut(s) 1222
BslI CCNNNNNNNGG 4 cut(s) 931, 1145, 1408, 1652
BsmAI GTCTC 3 cut(s) 354, 1410, 1859
BsmFI GGGAC 1 cut(s) 1222
BsmI GAATGC 1 cut(s) 177
BsnI GGCC 3 cut(s) 107, 924, 2138
Bso31I GGTCTC 1 cut(s) 354
Bsp119I TTCGAA 1 cut(s) 602
Bsp1286I GDGCHC 1 cut(s) 1979
Bsp1407I TGTACA 2 cut(s) 1333, 1906
Bsp143I GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
BspACI CCGC 4 cut(s) 174, 779, 940, 1792
BspANI GGCC 3 cut(s) 107, 924, 2138
BspCNI CTCAG 7 cut(s) 1089, 1303, 1438, 1465, 1555, 2086, 2095
BspFNI CGCG 1 cut(s) 174
BspHI TCATGA 1 cut(s) 1699
BspLI GGNNCC 3 cut(s) 1210, 1361, 1920
BspMAI CTGCAG 3 cut(s) 1260, 1600, 2001
BspPI GGATC 3 cut(s) 982, 1517, 1663
BspT104I TTCGAA 1 cut(s) 602
BspTI CTTAAG 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 354
BsrGI TGTACA 2 cut(s) 1333, 1906
BsrI ACTGG 2 cut(s) 662, 1783
BssECI CCNNGG 3 cut(s) 163, 761, 931
BssMI GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
BssNI GRCGYC 1 cut(s) 132
BssT1I CCWWGG 1 cut(s) 761
Bst2UI CCWGG 4 cut(s) 165, 932, 1278, 1653
Bst4CI ACNGT 5 cut(s) 91, 823, 1120, 1508, 1968
Bst6I CTCTTC 1 cut(s) 64
BstACI GRCGYC 1 cut(s) 132
BstAFI CTTAAG 1 cut(s) 182
BstAUI TGTACA 2 cut(s) 1333, 1906
BstBI TTCGAA 1 cut(s) 602
BstC8I GCNNGC 2 cut(s) 798, 1742
BstDEI CTNAG 9 cut(s) 683, 1009, 1097, 1290, 1446, 1473, 1563, 2073, 2082
BstEII GGTNACC 1 cut(s) 817
BstENI CCTNNNNNAGG 1 cut(s) 1650
BstF5I GGATG 7 cut(s) 373, 532, 541, 552, 1329, 1489, 1723
BstFNI CGCG 1 cut(s) 174
BstKTI GATC 6 cut(s) 393, 990, 1525, 1658, 1705, 1725
BstMAI GTCTC 3 cut(s) 354, 1410, 1859
BstMBI GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
BstMWI GCNNNNNNNGC 7 cut(s) 104, 174, 894, 1247, 1301, 1595, 2135
BstNI CCWGG 4 cut(s) 165, 932, 1278, 1653
BstNSI RCATGY 1 cut(s) 671
BstPI GGTNACC 1 cut(s) 817
BstSCI CCNGG 4 cut(s) 163, 930, 1276, 1651
BstSFI CTRYAG 3 cut(s) 1256, 1596, 1997
BstUI CGCG 1 cut(s) 174
BstV1I GCAGC 3 cut(s) 838, 1379, 1675
BstV2I GAAGAC 5 cut(s) 119, 299, 1789, 2028, 2162
Bsu36I CCTNAGG 3 cut(s) 683, 1009, 1563
BsuI GTATCC 1 cut(s) 706
BsuRI GGCC 3 cut(s) 107, 924, 2138
BtsCI GGATG 7 cut(s) 373, 532, 541, 552, 1329, 1489, 1723
BtsI GCAGTG 3 cut(s) 480, 528, 1265
BtsIMutI CAGTG 3 cut(s) 480, 528, 1265
Cac8I GCNNGC 2 cut(s) 798, 1742
CaiI CAGNNNCTG 3 cut(s) 977, 1264, 1297
CciI TCATGA 1 cut(s) 1699
Cfr13I GGNCC 3 cut(s) 530, 1209, 1918
CseI GACGC 1 cut(s) 304
Csp6I GTAC 5 cut(s) 648, 783, 1180, 1334, 1907
CviAII CATG 7 cut(s) 109, 205, 668, 1126, 1364, 1700, 1952
CviQI GTAC 5 cut(s) 648, 783, 1180, 1334, 1907
DdeI CTNAG 9 cut(s) 683, 1009, 1097, 1290, 1446, 1473, 1563, 2073, 2082
DpnI GATC 6 cut(s) 392, 989, 1524, 1657, 1704, 1724
DpnII GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
EaeI YGGCCR 3 cut(s) 105, 922, 2136
Eam1104I CTCTTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 64
Eco130I CCWWGG 1 cut(s) 761
Eco31I GGTCTC 1 cut(s) 354
Eco32I GATATC 1 cut(s) 1606
Eco47I GGWCC 3 cut(s) 530, 1209, 1918
Eco57I CTGAAG 4 cut(s) 999, 1286, 2114, 2174
Eco81I CCTNAGG 3 cut(s) 683, 1009, 1563
Eco91I GGTNACC 1 cut(s) 817
EcoNI CCTNNNNNAGG 1 cut(s) 1650
EcoO109I RGGNCCY 2 cut(s) 1209, 1918
EcoO65I GGTNACC 1 cut(s) 817
EcoRI GAATTC 2 cut(s) 598, 1757
EcoRII CCWGG 4 cut(s) 163, 930, 1276, 1651
EcoRV GATATC 1 cut(s) 1606
EcoT14I CCWWGG 1 cut(s) 761
EcoT22I ATGCAT 1 cut(s) 554
ErhI CCWWGG 1 cut(s) 761
FaeI CATG 7 cut(s) 112, 208, 671, 1129, 1367, 1703, 1955
FalI AAGNNNNNCTT 6 cut(s) 482, 514, 897, 929, 2087, 2119
FaqI GGGAC 1 cut(s) 1222
FatI CATG 7 cut(s) 108, 204, 667, 1125, 1363, 1699, 1951
FauI CCCGC 2 cut(s) 772, 1785
FbaI TGATCA 1 cut(s) 390
Fnu4HI GCNGC 4 cut(s) 175, 852, 1368, 1689
FokI GGATG 7 cut(s) 380, 539, 539, 548, 1336, 1496, 1730
Fsp4HI GCNGC 4 cut(s) 175, 852, 1368, 1689
FspBI CTAG 3 cut(s) 1527, 1706, 2194
GluI GCNGC 4 cut(s) 175, 852, 1368, 1689
HaeIII GGCC 3 cut(s) 107, 924, 2138
HapII CCGG 1 cut(s) 533
HgaI GACGC 1 cut(s) 304
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 7 cut(s) 112, 208, 671, 1129, 1367, 1703, 1955
HincII GTYRAC 1 cut(s) 1030
HindII GTYRAC 1 cut(s) 1030
HindIII AAGCTT 1 cut(s) 723
HinfI GANTC 4 cut(s) 34, 125, 974, 2051
HpaI GTTAAC 1 cut(s) 1030
HpaII CCGG 1 cut(s) 533
HphI GGTGA 6 cut(s) 220, 286, 374, 505, 635, 1465
Hpy166II GTNNAC 4 cut(s) 1030, 1043, 1909, 1949
Hpy188III TCNNGA 6 cut(s) 31, 408, 573, 1562, 1673, 1700
Hpy8I GTNNAC 4 cut(s) 1030, 1043, 1909, 1949
Hpy99I CGWCG 3 cut(s) 25, 134, 137
HpyAV CCTTC 8 cut(s) 221, 271, 377, 902, 1139, 1444, 1652, 1708
HpyCH4III ACNGT 5 cut(s) 91, 823, 1120, 1508, 1968
HpyCH4IV ACGT 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 174, 894, 1247, 1301, 1595, 2135
HpyF3I CTNAG 9 cut(s) 683, 1009, 1097, 1290, 1446, 1473, 1563, 2073, 2082
HpySE526I ACGT 1 cut(s) 132
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 7 cut(s) 112, 208, 671, 1129, 1367, 1703, 1955
Ksp22I TGATCA 1 cut(s) 390
KspAI GTTAAC 1 cut(s) 1030
Kzo9I GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
LmnI GCTCC 3 cut(s) 265, 287, 1085
Lsp1109I GCAGC 3 cut(s) 838, 1379, 1675
LweI GCATC 8 cut(s) 508, 526, 561, 735, 1004, 1119, 1708, 1968
MaeI CTAG 3 cut(s) 1527, 1706, 2194
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 7 cut(s) 146, 511, 817, 1340, 1591, 1774, 1784
MalI GATC 6 cut(s) 392, 989, 1524, 1657, 1704, 1724
MboI GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
MhlI GDGCHC 1 cut(s) 1979
MlsI TGGCCA 3 cut(s) 107, 924, 2138
MluNI TGGCCA 3 cut(s) 107, 924, 2138
MmeI TCCRAC 3 cut(s) 115, 153, 1094
Mox20I TGGCCA 3 cut(s) 107, 924, 2138
Mph1103I ATGCAT 1 cut(s) 554
MroXI GAANNNNTTC 1 cut(s) 1060
MscI TGGCCA 3 cut(s) 107, 924, 2138
MslI CAYNNNNRTG 1 cut(s) 89
Msp20I TGGCCA 3 cut(s) 107, 924, 2138
MspCI CTTAAG 1 cut(s) 182
MspI CCGG 1 cut(s) 533
MspR9I CCNGG 4 cut(s) 165, 932, 1278, 1653
Mva1269I GAATGC 1 cut(s) 177
MvaI CCWGG 4 cut(s) 165, 932, 1278, 1653
MvnI CGCG 1 cut(s) 174
MwoI GCNNNNNNNGC 7 cut(s) 104, 174, 894, 1247, 1301, 1595, 2135
NdeII GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
NlaIII CATG 7 cut(s) 112, 208, 671, 1129, 1367, 1703, 1955
NlaIV GGNNCC 3 cut(s) 1210, 1361, 1920
NmuCI GTSAC 2 cut(s) 511, 1774
NsiI ATGCAT 1 cut(s) 554
NspI RCATGY 1 cut(s) 671
NspV TTCGAA 1 cut(s) 602
OliI CACNNNNGTG 1 cut(s) 89
PagI TCATGA 1 cut(s) 1699
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PctI GAATGC 1 cut(s) 177
PdmI GAANNNNTTC 1 cut(s) 1060
PfeI GAWTC 4 cut(s) 34, 125, 974, 2051
PflMI CCANNNNNTGG 1 cut(s) 931
PfoI TCCNGGA 1 cut(s) 1276
PkrI GCNGC 4 cut(s) 176, 853, 1369, 1690
PpuMI RGGWCCY 2 cut(s) 1209, 1918
PshBI ATTAAT 1 cut(s) 402
Psp5II RGGWCCY 2 cut(s) 1209, 1918
Psp6I CCWGG 4 cut(s) 163, 930, 1276, 1651
PspEI GGTNACC 1 cut(s) 817
PspGI CCWGG 4 cut(s) 163, 930, 1276, 1651
PspN4I GGNNCC 3 cut(s) 1210, 1361, 1920
PspPI GGNCC 3 cut(s) 530, 1209, 1918
PspPPI RGGWCCY 2 cut(s) 1209, 1918
PstI CTGCAG 3 cut(s) 1260, 1600, 2001
PstNI CAGNNNCTG 3 cut(s) 977, 1264, 1297
RsaI GTAC 5 cut(s) 649, 784, 1181, 1335, 1908
RsaNI GTAC 5 cut(s) 648, 783, 1180, 1334, 1907
RseI CAYNNNNRTG 1 cut(s) 89
SatI GCNGC 4 cut(s) 175, 852, 1368, 1689
Sau3AI GATC 6 cut(s) 390, 987, 1522, 1655, 1702, 1722
Sau96I GGNCC 3 cut(s) 530, 1209, 1918
ScaI AGTACT 1 cut(s) 1181
ScrFI CCNGG 4 cut(s) 165, 932, 1278, 1653
SduI GDGCHC 1 cut(s) 1979
SfaNI GCATC 8 cut(s) 508, 526, 561, 735, 1004, 1119, 1708, 1968
SfcI CTRYAG 3 cut(s) 1256, 1596, 1997
SfuI TTCGAA 1 cut(s) 602
SinI GGWCC 3 cut(s) 530, 1209, 1918
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 2 cut(s) 182, 1213
SmoI CTYRAG 2 cut(s) 182, 1213
SsiI CCGC 4 cut(s) 174, 779, 940, 1792
SspI AATATT 2 cut(s) 141, 1558
SspMI CTAG 3 cut(s) 1527, 1706, 2194
StyD4I CCNGG 4 cut(s) 163, 930, 1276, 1651
StyI CCWWGG 1 cut(s) 761
TaaI ACNGT 5 cut(s) 91, 823, 1120, 1508, 1968
TaiI ACGT 1 cut(s) 135
TaqI TCGA 7 cut(s) 219, 336, 466, 602, 1228, 1608, 2162
TaqII GACCGA 1 cut(s) 1416
TatI WGTACW 3 cut(s) 1179, 1333, 1906
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 4 cut(s) 34, 125, 974, 2051
TscAI CASTG 3 cut(s) 480, 528, 1265
TseFI GTSAC 2 cut(s) 511, 1774
TseI GCWGC 3 cut(s) 851, 1367, 1688
Tsp45I GTSAC 2 cut(s) 511, 1774
TspGWI ACGGA 4 cut(s) 134, 545, 1181, 1189
TspRI CASTG 3 cut(s) 480, 528, 1265
Van91I CCANNNNNTGG 1 cut(s) 931
Vha464I CTTAAG 1 cut(s) 182
VpaK11BI GGWCC 3 cut(s) 530, 1209, 1918
VspI ATTAAT 1 cut(s) 402
XagI CCTNNNNNAGG 1 cut(s) 1650
XapI RAATTY 3 cut(s) 568, 598, 1757
XceI RCATGY 1 cut(s) 671
XcmI CCANNNNNNNNNTGG 1 cut(s) 404
XmnI GAANNNNTTC 1 cut(s) 1060
XspI CTAG 3 cut(s) 1527, 1706, 2194
ZraI GACGTC 1 cut(s) 133
ZrmI AGTACT 1 cut(s) 1181
Zsp2I ATGCAT 1 cut(s) 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.