Rorug04G0330400
ERF Family

heavy metal transport detoxification superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0004807
Physical Location & Seq
Forward (+)
50496741 .. 50502478
5738 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0330400.1

Sequence Viewer

Length: 2100 bp
ATGGCGGAGCTCCCAATCCTTCAGTTCGAAGAGAAAATCATCGAAACAGTAGAACGGAACTCCGTCGTTGTCATTATCGGAGAGACCGGTTCCGGAAAGAGCACTCAGCTCTCTCAAATCCTCCACAGAAGAGGCTACACCAACTCCGGCGTCGTCGGCGTCACTCAGCCTCGCCGTGTCGCCGCCGTCTCCGTCGCCAGACGAGTTTCGCAGGAGCTCAATGTTCGGCTCGGCGAGGAAGTCGGATACGCCATCAGATTCGAAGATAGAACTTCCGAAAGGACTCGGATCAAGTACTTGACCGATGGAGTTCTTCTTCGTGAGAGCCTATCCAATCCGGAGCTCGATCAGTACTCTGTAATTATACTTGACGAGGCTCACGAGAGAAGTCTCAACACGGACATATTGCTGGGACTGATGAAACGATTGGTGAAGAGGCGTGCTTCGAATTTGAAGGTTCTTATTACTTCGGCGACTCTTGATGGTGATAAAGTATCACAGTTCTTTTCGAATTGCCCGGTGCTGAATGTTCCGGGGAAGCTATACCCTGTGGAGATATTGTACAGCAATGAGCGTCCTAAGAGCTATCTTGAGTCATCCTTGAAGACAGCTCTCGATATACATATTAAGGAACCTGAAGGAGATGTCTTGATATTCATGACTGGGCAGGATGACATAGAGAAGTTGGTCTCTAAGTTAGAAGATAGAGTTAGAAGCCTGGAAGAAGGATCTGTCTTGGATGCCATAATCCTTCCCCTTCACGGTTCTCTGCAGCCTGAAATGCAGGTACGTGTATTTAGTCCCCCACCTCCTAATTGTAGGAGATTTATTGTTGCCACAAACATTGCTGAAACTTCTTTGACTGTTGATGGTGTTGTGTATGTTATTGATTCTGGTTATGTGAAGCAACGGCAGTACAACCCCTCAACTGGCATGTACTCCCTCGAAGTTGTTCAAATTAGCAAGGTACAAGCTAATCAACGAGCAGGACGAGCTGGAAGGACACGTCCTGGGAAATGCTATCGGTTATATCCTTCCATTGCTTACCATGAGGAGCTGCTGGATGCAACAATTCCTGAAATTCAACGTTCTTCACTTGCTGGAAGTGTTCTTTATTTGAAATCCTTGGACCTCCCTGATATTGACATTCTCACATTCGATTTTCTTGATTCTCCTTCCTCTGAATCTTTACAAGATGCTCTGAAGCAGTTGTATCTTATTGATGCTATTGATGAAAATGGATTGATCACGAGAGTTGGGAAAACAATGGCTGAGCTTCCACTAGAACCTTCACTGTCAAGAACCTTAATGGAGGCGAATGAGTGTGGTTGCTTGTCCCAGGCTTTGACAGTTGCTGCTATGTTATCTGCAGAAACTACATTGCTTCCTGGTCGAAGCAAGAGTACTGAGAAGAAAAGGAAACATGATCATTTGGACCTTCCTGATGGTTCTGGTTGGGGTGATCACATCCAGTTGCTACAGATCTATGAGTGCTGGCATCAAACTCACTATGACATTGATTGGTGCAAGGACCGTGGCTTGCAGGTAAGAGGGATGACGTTTGTCAAGGATGTAAGGAAACAGCTATGTCAAATAATGCAAAAGACAGCAAAGGGATCATTAGATGTACAGACACGCAGAAGAGGGAAGCAAACCCAACAGGATTATAATAACTTGAGGAAGGCATTATGTGTGGGGTATGCAAATCAGCTTGCTGAGAGAATGGTATTTCACAATGGCTATCGAACTTTAGGTTTTAAGCCCCAAGTAGTACAGGTGCATCCATCCTCTGTGCTAAAACCAGATGATGAAGGGAAATTTCCAAATTATGTCGTGTACCAGGAACTTATTGCCACTTCTCGTCCATACTTGCGCACTGTATGTGCTGTAAATGTTGCATGGGTTACACCCATTTTGAACAAGGTTAATAAACTAAACATCAACAAACTGAGCGGTGGGAGTGGTCATATTGAAGAGCATGCAGAGGGAAATATTTCTGATTTGCCAAAGAAAGATGCTGTTACAGCAGTTCCTGATGATCAAGAAAGTAAAATACAAGCAGCCAGAGAACGATTTCTTGCTCGTAAAGGAAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMA

Protein Analysis

699

Amino Acids

78.37

Weight (kDa)

8.15

Isoelectric Point (pI)

48.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 11 - 166 9.1e-09 DEAD/DEAH box helicase
AAA_22 PF13401 19 - 136 1.9e-07 AAA domain
Helicase_C PF00271 206 - 335 1.2e-11 Helicase conserved C-terminal domain
WHD_HA2 PF04408 400 - 428 3.5e-08 Helicase associated domain (HA2), winged-helix
HA2_C PF21010 429 - 492 6.4e-08 Helicase associated domain (HA2), ratchet-like
OB_NTP_bind PF07717 559 - 639 2.5e-18 Oligonucleotide/oligosaccharide-binding (OB)-fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1668
Acc16I TGCGCA 1 cut(s) 1874
Acc36I ACCTGC 2 cut(s) 775, 1534
AccBSI CCGCTC 1 cut(s) 1953
AccIII TCCGGA 2 cut(s) 92, 337
AciI CCGC 3 cut(s) 5, 183, 1953
AclI AACGTT 1 cut(s) 1087
AclWI GGATC 3 cut(s) 296, 736, 1624
AcsI RAATTY 3 cut(s) 448, 1080, 1817
AcuI CTGAAG 3 cut(s) 5, 657, 1223
AcyI GRCGYC 2 cut(s) 150, 159
AfiI CCNNNNNNNGG 2 cut(s) 761, 929
AflIII ACRYGT 2 cut(s) 790, 1004
AgeI ACCGGT 1 cut(s) 86
AgsI TTSAA 7 cut(s) 454, 604, 956, 1085, 1120, 1918, 1973
AjiI CACGTC 1 cut(s) 1007
AjnI CCWGG 5 cut(s) 717, 1009, 1338, 1387, 1839
Alw21I GWGCWC 4 cut(s) 12, 104, 219, 345
Alw26I GTCTC 4 cut(s) 77, 193, 395, 694
AlwI GGATC 3 cut(s) 296, 736, 1624
AlwNI CAGNNNCTG 2 cut(s) 1355, 2033
Aor13HI TCCGGA 2 cut(s) 92, 337
ApeKI GCWGC 4 cut(s) 772, 1057, 1355, 2060
ApoI RAATTY 3 cut(s) 448, 1080, 1817
AsiGI ACCGGT 1 cut(s) 86
Asp700I GAANNNNTTC 3 cut(s) 951, 1993, 2073
AspLEI GCGC 1 cut(s) 1875
AspS9I GGNCC 3 cut(s) 1129, 1435, 1531
AsuC2I CCSGG 2 cut(s) 518, 534
AsuHPI GGTGA 3 cut(s) 442, 497, 1472
AsuII TTCGAA 4 cut(s) 27, 261, 446, 509
AvaII GGWCC 3 cut(s) 1129, 1435, 1531
BanII GRGCYC 3 cut(s) 12, 219, 345
BarI GAAGNNNNNNTAC 2 cut(s) 1387, 1419
BauI CACGAG 2 cut(s) 380, 1249
BbsI GAAGAC 1 cut(s) 611
Bbv12I GWGCWC 4 cut(s) 12, 104, 219, 345
BbvI GCAGC 4 cut(s) 784, 1044, 1342, 2072
BccI CCATC 6 cut(s) 260, 299, 476, 863, 1439, 1792
BceAI ACGGC 3 cut(s) 159, 170, 926
BciT130I CCWGG 5 cut(s) 719, 1011, 1340, 1389, 1841
BciVI GTATCC 1 cut(s) 239
BclI TGATCA 4 cut(s) 1245, 1426, 1462, 2038
BcnI CCSGG 2 cut(s) 518, 534
BcoDI GTCTC 4 cut(s) 77, 193, 395, 694
BfaI CTAG 1 cut(s) 1283
BfmI CTRYAG 3 cut(s) 770, 1368, 1478
BfuAI ACCTGC 2 cut(s) 775, 1534
BfuI GTATCC 1 cut(s) 239
BglII AGATCT 1 cut(s) 1482
BisI GCNGC 5 cut(s) 183, 773, 1058, 1356, 2061
BlpI GCTNAGC 1 cut(s) 1272
BlsI GCNGC 5 cut(s) 184, 774, 1059, 1357, 2062
BmcAI AGTACT 3 cut(s) 296, 353, 1405
Bme1390I CCNGG 7 cut(s) 518, 534, 719, 1011, 1340, 1389, 1841
Bme18I GGWCC 3 cut(s) 1129, 1435, 1531
BmgBI CACGTC 1 cut(s) 1007
BmgT120I GGNCC 3 cut(s) 1129, 1435, 1531
BmiI GGNNCC 2 cut(s) 91, 633
BmrFI CCNGG 7 cut(s) 518, 534, 719, 1011, 1340, 1389, 1841
BmrI ACTGGG 1 cut(s) 672
BmsI GCATC 7 cut(s) 730, 1054, 1186, 1213, 1507, 1789, 2005
BmuI ACTGGG 1 cut(s) 672
BoxI GACNNNNGTC 1 cut(s) 1562
BpiI GAAGAC 1 cut(s) 611
Bpu1102I GCTNAGC 1 cut(s) 1272
Bpu14I TTCGAA 4 cut(s) 27, 261, 446, 509
BpuEI CTTGAG 2 cut(s) 611, 1696
BpuMI CCSGG 2 cut(s) 518, 534
BsaAI YACGTR 1 cut(s) 791
BsaHI GRCGYC 2 cut(s) 150, 159
BsaI GGTCTC 2 cut(s) 77, 694
BsaJI CCNNGG 5 cut(s) 533, 1010, 1125, 1338, 1534
BsaWI WCCGGW 3 cut(s) 86, 92, 337
BsaXI ACNNNNNCTCC 4 cut(s) 128, 158, 545, 575
Bsc4I CCNNNNNNNGG 2 cut(s) 761, 929
Bse118I RCCGGY 1 cut(s) 86
Bse1I ACTGG 3 cut(s) 667, 934, 1471
Bse3DI GCAATG 4 cut(s) 574, 843, 1038, 1379
BseAI TCCGGA 2 cut(s) 92, 337
BseBI CCWGG 5 cut(s) 719, 1011, 1340, 1389, 1841
BseDI CCNNGG 5 cut(s) 533, 1010, 1125, 1338, 1534
BseGI GGATG 9 cut(s) 596, 676, 745, 1069, 1467, 1560, 1576, 1780, 1784
BseLI CCNNNNNNNGG 2 cut(s) 761, 929
BseMI GCAATG 4 cut(s) 574, 843, 1038, 1379
BseMII CTCAG 6 cut(s) 119, 179, 1263, 1398, 1707, 1940
BseNI ACTGG 3 cut(s) 667, 934, 1471
BseRI GAGGAG 1 cut(s) 1067
BseXI GCAGC 4 cut(s) 784, 1044, 1342, 2072
BseYI CCCAGC 1 cut(s) 409
BshTI ACCGGT 1 cut(s) 86
BsiHKAI GWGCWC 4 cut(s) 12, 104, 219, 345
BsiSI CCGG 6 cut(s) 87, 93, 147, 338, 518, 533
BslFI GGGAC 3 cut(s) 426, 786, 1321
BslI CCNNNNNNNGG 2 cut(s) 761, 929
BsmAI GTCTC 4 cut(s) 77, 193, 395, 694
BsmBI CGTCTC 1 cut(s) 193
BsmFI GGGAC 3 cut(s) 426, 786, 1321
Bso31I GGTCTC 2 cut(s) 77, 694
Bsp119I TTCGAA 4 cut(s) 27, 261, 446, 509
Bsp1286I GDGCHC 4 cut(s) 12, 104, 219, 345
Bsp13I TCCGGA 2 cut(s) 92, 337
Bsp1407I TGTACA 2 cut(s) 561, 1627
Bsp143I GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
Bsp1720I GCTNAGC 1 cut(s) 1272
BspACI CCGC 3 cut(s) 5, 183, 1953
BspCNI CTCAG 6 cut(s) 118, 178, 1264, 1399, 1708, 1941
BspEI TCCGGA 2 cut(s) 92, 337
BspHI TCATGA 1 cut(s) 657
BspLI GGNNCC 2 cut(s) 91, 633
BspMAI CTGCAG 2 cut(s) 774, 1372
BspMI ACCTGC 2 cut(s) 775, 1534
BspPI GGATC 3 cut(s) 296, 736, 1624
BspQI GCTCTTC 1 cut(s) 1968
BspT104I TTCGAA 4 cut(s) 27, 261, 446, 509
BspTNI GGTCTC 2 cut(s) 77, 694
BsrBI CCGCTC 1 cut(s) 1953
BsrDI GCAATG 4 cut(s) 574, 843, 1038, 1379
BsrFI RCCGGY 1 cut(s) 86
BsrGI TGTACA 2 cut(s) 561, 1627
BsrI ACTGG 3 cut(s) 667, 934, 1471
BssAI RCCGGY 1 cut(s) 86
BssECI CCNNGG 5 cut(s) 533, 1010, 1125, 1338, 1534
BssMI GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
BssNI GRCGYC 2 cut(s) 150, 159
BssSI CACGAG 2 cut(s) 380, 1249
BssT1I CCWWGG 1 cut(s) 1125
Bst2BI CACGAG 2 cut(s) 380, 1249
Bst2UI CCWGG 5 cut(s) 719, 1011, 1340, 1389, 1841
Bst4CI ACNGT 8 cut(s) 49, 501, 764, 865, 1296, 1351, 1535, 1879
Bst6I CTCTTC 5 cut(s) 24, 124, 428, 1636, 1968
BstACI GRCGYC 2 cut(s) 150, 159
BstAUI TGTACA 2 cut(s) 561, 1627
BstBAI YACGTR 1 cut(s) 791
BstBI TTCGAA 4 cut(s) 27, 261, 446, 509
BstC8I GCNNGC 5 cut(s) 441, 1496, 1541, 1713, 1980
BstDEI CTNAG 8 cut(s) 105, 165, 579, 693, 1272, 1407, 1716, 1949
BstDSI CCRYGG 1 cut(s) 1534
BstF5I GGATG 9 cut(s) 596, 676, 745, 1069, 1467, 1560, 1576, 1780, 1784
BstHHI GCGC 1 cut(s) 1875
BstKTI GATC 9 cut(s) 291, 349, 731, 1248, 1429, 1465, 1485, 1619, 2041
BstMAI GTCTC 4 cut(s) 77, 193, 395, 694
BstMBI GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
BstMWI GCNNNNNNNGC 4 cut(s) 156, 781, 992, 2024
BstNI CCWGG 5 cut(s) 719, 1011, 1340, 1389, 1841
BstNSI RCATGY 2 cut(s) 937, 1982
BstPAI GACNNNNGTC 1 cut(s) 1562
BstSCI CCNGG 7 cut(s) 516, 532, 717, 1009, 1338, 1387, 1839
BstSFI CTRYAG 3 cut(s) 770, 1368, 1478
BstV1I GCAGC 4 cut(s) 784, 1044, 1342, 2072
BstV2I GAAGAC 1 cut(s) 611
BstX2I RGATCY 2 cut(s) 728, 1482
BstYI RGATCY 2 cut(s) 728, 1482
BsuI GTATCC 1 cut(s) 239
BtgI CCRYGG 1 cut(s) 1534
BtrI CACGTC 1 cut(s) 1007
BtsCI GGATG 9 cut(s) 596, 676, 745, 1069, 1467, 1560, 1576, 1780, 1784
BtsIMutI CAGTG 2 cut(s) 1292, 1875
BveI ACCTGC 2 cut(s) 775, 1534
Cac8I GCNNGC 5 cut(s) 441, 1496, 1541, 1713, 1980
CaiI CAGNNNCTG 2 cut(s) 1355, 2033
CciI TCATGA 1 cut(s) 657
CfoI GCGC 1 cut(s) 1875
Cfr10I RCCGGY 1 cut(s) 86
Cfr13I GGNCC 3 cut(s) 1129, 1435, 1531
CseI GACGC 3 cut(s) 139, 148, 563
CspAI ACCGGT 1 cut(s) 86
CspCI CAANNNNNGTGG 4 cut(s) 826, 861, 1516, 1551
CviAII CATG 6 cut(s) 658, 934, 1049, 1424, 1899, 1979
DdeI CTNAG 8 cut(s) 105, 165, 579, 693, 1272, 1407, 1716, 1949
DpnI GATC 9 cut(s) 290, 348, 730, 1247, 1428, 1464, 1484, 1618, 2040
DpnII GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
Eam1104I CTCTTC 5 cut(s) 24, 124, 428, 1636, 1968
EarI CTCTTC 5 cut(s) 24, 124, 428, 1636, 1968
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 3 cut(s) 10, 217, 343
Eco130I CCWWGG 1 cut(s) 1125
Eco24I GRGCYC 3 cut(s) 12, 219, 345
Eco31I GGTCTC 2 cut(s) 77, 694
Eco47I GGWCC 3 cut(s) 1129, 1435, 1531
Eco53kI GAGCTC 3 cut(s) 10, 217, 343
Eco57I CTGAAG 3 cut(s) 5, 657, 1223
EcoICRI GAGCTC 3 cut(s) 10, 217, 343
EcoRII CCWGG 5 cut(s) 717, 1009, 1338, 1387, 1839
EcoT14I CCWWGG 1 cut(s) 1125
EcoT38I GRGCYC 3 cut(s) 12, 219, 345
ErhI CCWWGG 1 cut(s) 1125
Esp3I CGTCTC 1 cut(s) 193
FaeI CATG 6 cut(s) 661, 937, 1052, 1427, 1902, 1982
FaqI GGGAC 3 cut(s) 426, 786, 1321
FatI CATG 6 cut(s) 657, 933, 1048, 1423, 1898, 1978
FbaI TGATCA 4 cut(s) 1245, 1426, 1462, 2038
Fnu4HI GCNGC 5 cut(s) 183, 773, 1058, 1356, 2061
FokI GGATG 9 cut(s) 583, 683, 752, 1076, 1454, 1567, 1583, 1767, 1771
FriOI GRGCYC 3 cut(s) 12, 219, 345
Fsp4HI GCNGC 5 cut(s) 183, 773, 1058, 1356, 2061
FspBI CTAG 1 cut(s) 1283
FspI TGCGCA 1 cut(s) 1874
GlaI GCGC 1 cut(s) 1874
GluI GCNGC 5 cut(s) 183, 773, 1058, 1356, 2061
GsaI CCCAGC 1 cut(s) 413
HapII CCGG 6 cut(s) 87, 93, 147, 338, 518, 533
HgaI GACGC 3 cut(s) 139, 148, 563
HhaI GCGC 1 cut(s) 1875
Hin1I GRCGYC 2 cut(s) 150, 159
Hin1II CATG 6 cut(s) 661, 937, 1052, 1427, 1902, 1982
Hin6I GCGC 1 cut(s) 1873
HinP1I GCGC 1 cut(s) 1873
HinfI GANTC 7 cut(s) 258, 283, 475, 593, 890, 1169, 1184
HpaII CCGG 6 cut(s) 87, 93, 147, 338, 518, 533
HphI GGTGA 3 cut(s) 442, 497, 1472
Hpy166II GTNNAC 1 cut(s) 1837
Hpy188I TCNGA 8 cut(s) 80, 245, 257, 277, 288, 1183, 1203, 1999
Hpy8I GTNNAC 1 cut(s) 1837
Hpy99I CGWCG 4 cut(s) 68, 155, 158, 197
HpyCH4III ACNGT 8 cut(s) 49, 501, 764, 865, 1296, 1351, 1535, 1879
HpyCH4IV ACGT 4 cut(s) 790, 1006, 1087, 1559
HpyF10VI GCNNNNNNNGC 4 cut(s) 156, 781, 992, 2024
HpyF3I CTNAG 8 cut(s) 105, 165, 579, 693, 1272, 1407, 1716, 1949
HpySE526I ACGT 4 cut(s) 790, 1006, 1087, 1559
Hsp92I GRCGYC 2 cut(s) 150, 159
Hsp92II CATG 6 cut(s) 661, 937, 1052, 1427, 1902, 1982
HspAI GCGC 1 cut(s) 1873
Kpn2I TCCGGA 2 cut(s) 92, 337
Ksp22I TGATCA 4 cut(s) 1245, 1426, 1462, 2038
Kzo9I GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
LguI GCTCTTC 1 cut(s) 1968
LmnI GCTCC 5 cut(s) 7, 15, 214, 340, 1054
Lsp1109I GCAGC 4 cut(s) 784, 1044, 1342, 2072
LweI GCATC 7 cut(s) 730, 1054, 1186, 1213, 1507, 1789, 2005
MaeI CTAG 1 cut(s) 1283
MaeII ACGT 4 cut(s) 790, 1006, 1087, 1559
MaeIII GTNAC 3 cut(s) 160, 1903, 2020
MalI GATC 9 cut(s) 290, 348, 730, 1247, 1428, 1464, 1484, 1618, 2040
MbiI CCGCTC 1 cut(s) 1953
MboI GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
MflI RGATCY 2 cut(s) 728, 1482
MhlI GDGCHC 4 cut(s) 12, 104, 219, 345
MluCI AATT 9 cut(s) 360, 448, 511, 814, 957, 1071, 1080, 1817, 1825
MlyI GAGTC 3 cut(s) 277, 469, 602
MmeI TCCRAC 1 cut(s) 223
MroI TCCGGA 2 cut(s) 92, 337
MroXI GAANNNNTTC 3 cut(s) 951, 1993, 2073
MseI TTAA 4 cut(s) 627, 1307, 1758, 1926
MspI CCGG 6 cut(s) 87, 93, 147, 338, 518, 533
MspR9I CCNGG 7 cut(s) 518, 534, 719, 1011, 1340, 1389, 1841
MvaI CCWGG 5 cut(s) 719, 1011, 1340, 1389, 1841
MwoI GCNNNNNNNGC 4 cut(s) 156, 781, 992, 2024
NciI CCSGG 2 cut(s) 518, 534
NdeII GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
NlaIII CATG 6 cut(s) 661, 937, 1052, 1427, 1902, 1982
NlaIV GGNNCC 2 cut(s) 91, 633
NmeAIII GCCGAG 1 cut(s) 210
NmuCI GTSAC 1 cut(s) 160
NsbI TGCGCA 1 cut(s) 1874
NspI RCATGY 2 cut(s) 937, 1982
NspV TTCGAA 4 cut(s) 27, 261, 446, 509
PaeI GCATGC 1 cut(s) 1982
PagI TCATGA 1 cut(s) 657
PciSI GCTCTTC 1 cut(s) 1968
PcsI WCGNNNNNNNCGW 2 cut(s) 378, 988
PdmI GAANNNNTTC 3 cut(s) 951, 1993, 2073
PfeI GAWTC 4 cut(s) 258, 890, 1169, 1184
PinAI ACCGGT 1 cut(s) 86
PkrI GCNGC 5 cut(s) 184, 774, 1059, 1357, 2062
PleI GAGTC 3 cut(s) 277, 469, 601
PpsI GAGTC 3 cut(s) 277, 469, 601
Ppu21I YACGTR 1 cut(s) 791
PshAI GACNNNNGTC 1 cut(s) 1562
PsiI TTATAA 1 cut(s) 1668
Psp124BI GAGCTC 3 cut(s) 12, 219, 345
Psp1406I AACGTT 1 cut(s) 1087
Psp6I CCWGG 5 cut(s) 717, 1009, 1338, 1387, 1839
PspFI CCCAGC 1 cut(s) 409
PspGI CCWGG 5 cut(s) 717, 1009, 1338, 1387, 1839
PspN4I GGNNCC 2 cut(s) 91, 633
PspPI GGNCC 3 cut(s) 1129, 1435, 1531
PstI CTGCAG 2 cut(s) 774, 1372
PstNI CAGNNNCTG 2 cut(s) 1355, 2033
PsuI RGATCY 2 cut(s) 728, 1482
SacI GAGCTC 3 cut(s) 12, 219, 345
SapI GCTCTTC 1 cut(s) 1968
SaqAI TTAA 4 cut(s) 627, 1307, 1758, 1926
SatI GCNGC 5 cut(s) 183, 773, 1058, 1356, 2061
Sau3AI GATC 9 cut(s) 288, 346, 728, 1245, 1426, 1462, 1482, 1616, 2038
Sau96I GGNCC 3 cut(s) 1129, 1435, 1531
ScaI AGTACT 3 cut(s) 296, 353, 1405
SchI GAGTC 3 cut(s) 277, 469, 602
ScrFI CCNGG 7 cut(s) 518, 534, 719, 1011, 1340, 1389, 1841
SduI GDGCHC 4 cut(s) 12, 104, 219, 345
SfaNI GCATC 7 cut(s) 730, 1054, 1186, 1213, 1507, 1789, 2005
SfcI CTRYAG 3 cut(s) 770, 1368, 1478
SfuI TTCGAA 4 cut(s) 27, 261, 446, 509
SinI GGWCC 3 cut(s) 1129, 1435, 1531
SmlI CTYRAG 2 cut(s) 590, 1675
SmoI CTYRAG 2 cut(s) 590, 1675
SphI GCATGC 1 cut(s) 1982
Sse9I AATT 9 cut(s) 360, 448, 511, 814, 957, 1071, 1080, 1817, 1825
SsiI CCGC 3 cut(s) 5, 183, 1953
SspI AATATT 1 cut(s) 1993
SspMI CTAG 1 cut(s) 1283
SstI GAGCTC 3 cut(s) 12, 219, 345
StyD4I CCNGG 7 cut(s) 516, 532, 717, 1009, 1338, 1387, 1839
StyI CCWWGG 1 cut(s) 1125
TaaI ACNGT 8 cut(s) 49, 501, 764, 865, 1296, 1351, 1535, 1879
TaiI ACGT 4 cut(s) 793, 1009, 1090, 1562
TaqII GACCGA 1 cut(s) 317
TasI AATT 9 cut(s) 360, 448, 511, 814, 957, 1071, 1080, 1817, 1825
TatI WGTACW 8 cut(s) 294, 351, 561, 915, 936, 1403, 1627, 1771
TauI GCSGC 1 cut(s) 185
TfiI GAWTC 4 cut(s) 258, 890, 1169, 1184
Tru1I TTAA 4 cut(s) 627, 1307, 1758, 1926
Tru9I TTAA 4 cut(s) 627, 1307, 1758, 1926
TscAI CASTG 2 cut(s) 1299, 1882
TseFI GTSAC 1 cut(s) 160
TseI GCWGC 4 cut(s) 772, 1057, 1355, 2060
Tsp45I GTSAC 1 cut(s) 160
TspDTI ATGAA 4 cut(s) 434, 646, 1248, 1824
TspGWI ACGGA 4 cut(s) 52, 70, 181, 413
TspRI CASTG 2 cut(s) 1299, 1882
VpaK11BI GGWCC 3 cut(s) 1129, 1435, 1531
XapI RAATTY 3 cut(s) 448, 1080, 1817
XceI RCATGY 2 cut(s) 937, 1982
XmnI GAANNNNTTC 3 cut(s) 951, 1993, 2073
XspI CTAG 1 cut(s) 1283
ZrmI AGTACT 3 cut(s) 296, 353, 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.