Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001843

Physical Location & Seq

Genomic Coordinates Reverse (-)

127286 .. 131303

Gene Structure 4018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0002000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGCCAACCATTGCTTCTTATGTAGTGTATCTGGGATCCCATGCACATGGTCCACAAGTCTTAGAAGCTGATCGTGAACGTGCAACTGATTCGCATTATGAATTCCTCGGATCATTCTTGGGAAGCACTGACAAAGCGAAAGAAGCGATTATTTACTCGTACAATAGATATATCAATGGTTTTGCTGCCACCCTTGAAGAGGAAGAGGCAGCTGAAATTGCAAAGCATCCAAACGTTGTCTCAGTTTTCTTAAACCAAGGAATAAAATTGCATACAACCCATTCATGGAATTTTATGCTACTGGAAAAGAACGGAGTAATTCACCCCAGTTCTATATGGAAGAAGGCCAGATTTGGTGAAGATACGATCATAGCCAATCTTGACACTGGTGTGTGGCTCGAATCGGAGAGCTTTAGTGACAAAGGGTTTGGACCCATTCCATCAAGGTGGAAAGGAATCTGTCAGAACGATACCACTGGGTTTTCCTGCAACAGGAAGCTCATCGGAGCAAGGTACTTCAATAAAGGACATGCTGCACTGGCAGGTGCACTGGCAGGGCCAGTACTCGACCCTTCTGTTTACTCTGCACGAGACTTAAACGGTCATGGCTCTCACACTCTATCGACGGCAGGTGGGAACTTTGTTCCTGGAGCAAGTGTGTTTGGCGTGGGGAATGGGACTGCCAAAGGTGGCTCCCCCAAGGCCCGAGTTGCTGCTTATAAAGTGTGCTGGCCAGAATTTGGCGGTGAGTGCTCTGCTGCTGACATCTTGGCAGCGTTTGATGAAGCAATACATGACGGGGTTGATGTGATTTCAGTCTCACTTGGTGTTGAGCACCCTCAAAATTACTTTGAGGATGGCGCTGCAATTGGGGCATTCCATGCTGTCAAGCATGGTATAGTTGTTGTATGCTCAGCAGGAAATTCTGGTCATGATGCTGGAACTGTCACAAATGTTGCACCATGGATAATAACCGTTGGAGCAAGTACTTTGGATCGAGAGTTTGAAGCTTTTGTTGAACTCCGTAATGGGCTGCGCCTCAAGGGAAGAAGCCTTTCTAAACCTTTGCCAGATGACATACTTTATCCACTTATAACTGGTGCACAAGCCAAAGCTGTCAATTCTTCTGCTGAAGATGCGATGCTTTGTCTTAGAGGAACCCTGGATCCTAAGAAGGTGAAGGGCAAAATTTTGGTCTGTCTTAGGGGTATCAGTCCAAGACTAGACAAGGGTCAACAAGCAGCTCTGGCCGGAGCAGTTGGGATGATTCTTTGTAATCATGAGGCTAGTGGTAATGTACTCTCTGATGATTATCACGTACTACCAGCGTCAAACATTAATTATAAAGATGGGGTTGCTGTCTTTGCCTACATAAATTCAACAGATGATCCATTGGGATTTATAACGGCCCCAACAGCACAACTGAATAGAAAACCTGCTCCATTCATGGCAGCTTTCTCCTCGCGAGGGCCAAACATGCTCACTCCTCAGATCCTTAAGCCTGATATCACTGCTCCTGGTGTAAATATCATAGCTGCATACACCCAAGCAAAAAGCCCTACAAGACAAAGCTATGATAAACGCAGGATTCCGTTTGTTACTGAATCTGGCACCTCCATGTCTTGCCCTCATGTAGCTGGAGTTGTAGGCCTTCTGAAGACGCTCTACCCTGACTGGAGTTCATCTGCAATAAAATCTGCAATCATGACAACTGCAAGAACGAGGGACAACACTGTGAATCCAATGCGGAATGGCTCGTTCATTAAAGCAACGCCATTCAATTATGGGCATGGTCATATAAGACCAAATCGTGCCATGGATCCTGGCTTGATCTATGACCTAAACATCAATGATTACCTAGACTTTCTTTGTGTCATTGGCTATAACAAGACAATGATGCAACTTTTCTCTGAAGCTCCTTATAAATGCCCCAAGTCAGCCAGTCTTGTTGACTTCAATTACCCTTCAATAACAGTCCCTGATTTGTCTGGCTCAGTCACTGTGACAAGAAGAGTGAAGAATGTTGGTTCTCCCAGAGGGGCCACATATGCCGTCCGAATTCGCGAACCAGTTGGAATTTCAGTATCAGTGGAGCCTAATATCTTGAAGTTCAATAAAATAGGTGAAGAGAAAAGTTTCAAGGTAACCCTGAAAGCTAAGAGACCTGGTGCAGCTAAGAACTATGTGTTTGGAGGGCTTATTTGGTCGGATGGCAAACACTATGTAAGGAGTCCAATAGTAGTTTCCTCTGCTGCTGGTGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009536 GO:0009579 GO:0030312 GO:0031976 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

755

Amino Acids

80.99

Weight (kDa)

8.84

Isoelectric Point (pI)

30.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	6 - 91	1.5e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	121 - 583	3.3e-42	Subtilase family
PA	PF02225	380 - 453	6.5e-12	PA domain
fn3_6	PF17766	651 - 748	3.3e-31	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001843)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06620 FvH4_3g06630 FvH4_3g06670 FvH4_3g06670
malus_domestica	MD10G1270700.v1.1
prunus_persica	Prupe.4G071000_v2.0.a1
pyrus_communis	pycom10g22650
rosa_chinensis	RchiOBHm_Chr5g0012471 RchiOBHm_Chr5g0012481 RchiOBHm_Chr5g0012491 RchiOBHm_Chr5g0012521
rosa_laevigata	RLG00000031919 RLG00000031920 RLG00000031921
rosa_multiflora	Rmu_sc0000904.1_g000009 Rmu_sc0001889.1_g000007 Rmu_sc0001889.1_g000008 Rmu_sc0001889.1_g000025 Rmu_sc0001889.1_g000032 Rmu_sc0039272.1_g000001
rosa_roxburghii	Rroxscaffold_1G00064170 Rroxscaffold_1G00064190 Rroxscaffold_1G00064200
rosa_rugosa	Rorug05G0001600 Rorug05G0001700 Rorug05G0001700 Rorug05G0001700 Rorug05G0001800 Rorug05G0001900 Rorug05G0002000 Rorug05G0002100
rosa_samantha	Rh5AG095800 Rh5AG095900 Rh5AG096100 Rh5BG092100 Rh5BG092200 Rh5BG092300 Rh5CG104800 Rh5CG104900 Rh5CG105200 Rh5DG091400 Rh5DG091500 Rh5DG091600 Rh5DG091800
rosa_wichuraiana	Rw5G008380 Rw5G008390 Rw5G008410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	5 cut(s)	720, 1094, 1344, 1403, 1923
AarI	CACCTGC	2 cut(s)	533, 620
Acc36I	ACCTGC	3 cut(s)	533, 620, 1444
AccB1I	GGYRCC	1 cut(s)	1610
AccB7I	CCANNNNNTGG	1 cut(s)	740
AccII	CGCG	2 cut(s)	1465, 2064
AciI	CCGC	2 cut(s)	744, 1747
AclI	AACGTT	1 cut(s)	234
AcoI	YGGCCR	2 cut(s)	731, 1248
AcsI	RAATTY	8 cut(s)	101, 289, 737, 922, 1188, 1375, 2058, 2076
AcuI	CTGAAG	3 cut(s)	1152, 1676, 1932
AdeI	CACNNNGTG	1 cut(s)	827
AfaI	GTAC	6 cut(s)	161, 515, 564, 988, 1299, 1320
AfiI	CCNNNNNNNGG	5 cut(s)	199, 285, 492, 740, 1467
AflII	CTTAAG	1 cut(s)	1496
AjnI	CCWGG	5 cut(s)	646, 1161, 1516, 1822, 2164
AjuI	GAANNNNNNNTTGG	3 cut(s)	30, 2227, 2259
AleI	CACNNNNGTG	1 cut(s)	389
AloI	GAACNNNNNNTCC	2 cut(s)	1150, 1182
Alw21I	GWGCWC	4 cut(s)	550, 755, 837, 1105
Alw26I	GTCTC	4 cut(s)	244, 585, 823, 2155
Alw44I	GTGCAC	2 cut(s)	546, 1101
AlwNI	CAGNNNCTG	2 cut(s)	1979, 2000
Ama87I	CYCGRG	1 cut(s)	705
AoxI	GGCC	9 cut(s)	345, 557, 702, 731, 1248, 1407, 1469, 1648, 2040
ApaLI	GTGCAC	2 cut(s)	546, 1101
ApoI	RAATTY	8 cut(s)	101, 289, 737, 922, 1188, 1375, 2058, 2076
ArsI	GACNNNNNNTTYG	4 cut(s)	410, 442, 1179, 1211
AseI	ATTAAT	1 cut(s)	1338
Asp700I	GAANNNNTTC	2 cut(s)	1054, 2135
AspLEI	GCGC	2 cut(s)	863, 1038
AspS9I	GGNCC	7 cut(s)	50, 431, 557, 703, 1408, 1469, 2040
AsuHPI	GGTGA	5 cut(s)	314, 368, 758, 1189, 2135
AvaI	CYCGRG	1 cut(s)	705
AvaII	GGWCC	2 cut(s)	50, 431
BaeGI	GKGCMC	2 cut(s)	550, 1105
BalI	TGGCCA	1 cut(s)	733
BamHI	GGATCC	3 cut(s)	35, 1165, 1819
BanI	GGYRCC	1 cut(s)	1610
BarI	GAAGNNNNNNTAC	2 cut(s)	1649, 1681
BauI	CACGAG	1 cut(s)	588
BbsI	GAAGAC	1 cut(s)	1664
Bbv12I	GWGCWC	4 cut(s)	550, 755, 837, 1105
BccI	CCATC	4 cut(s)	448, 851, 1343, 2204
BceAI	ACGGC	3 cut(s)	642, 1422, 2036
BcgI	CGANNNNNNTGC	2 cut(s)	72, 106
BciT130I	CCWGG	5 cut(s)	648, 1163, 1518, 1824, 2166
BcoDI	GTCTC	4 cut(s)	244, 585, 823, 2155
BfaI	CTAG	3 cut(s)	1223, 1287, 1859
BfoI	RGCGCY	1 cut(s)	864
BfrI	CTTAAG	1 cut(s)	1496
BfuAI	ACCTGC	3 cut(s)	533, 620, 1444
BlpI	GCTNAGC	1 cut(s)	913
BmcAI	AGTACT	2 cut(s)	564, 988
Bme1390I	CCNGG	5 cut(s)	648, 1163, 1518, 1824, 2166
Bme18I	GGWCC	2 cut(s)	50, 431
BmeT110I	CYCGRG	1 cut(s)	705
BmgT120I	GGNCC	7 cut(s)	50, 431, 557, 703, 1408, 1469, 2040
BmrFI	CCNGG	5 cut(s)	648, 1163, 1518, 1824, 2166
BmrI	ACTGGG	2 cut(s)	321, 486
BmsI	GCATC	5 cut(s)	235, 925, 1126, 1131, 1887
BmuI	ACTGGG	2 cut(s)	321, 486
BoxI	GACNNNNGTC	1 cut(s)	1230
BpiI	GAAGAC	1 cut(s)	1664
BpmI	CTGGAG	3 cut(s)	669, 1659, 1696
Bpu1102I	GCTNAGC	1 cut(s)	913
BpuEI	CTTGAG	1 cut(s)	1025
BsaAI	YACGTR	1 cut(s)	1318
BsaBI	GATNNNNATC	1 cut(s)	1311
BsaI	GGTCTC	1 cut(s)	2155
BsaJI	CCNNGG	6 cut(s)	106, 256, 699, 962, 1161, 1815
BsaXI	ACNNNNNCTCC	2 cut(s)	642, 672
Bsc4I	CCNNNNNNNGG	5 cut(s)	199, 285, 492, 740, 1467
Bse3DI	GCAATG	1 cut(s)	9
Bse8I	GATNNNNATC	1 cut(s)	1311
BseBI	CCWGG	5 cut(s)	648, 1163, 1518, 1824, 2166
BseDI	CCNNGG	6 cut(s)	106, 256, 699, 962, 1161, 1815
BseGI	GGATG	4 cut(s)	226, 862, 1269, 2215
BseJI	GATNNNNATC	1 cut(s)	1311
BseLI	CCNNNNNNNGG	5 cut(s)	199, 285, 492, 740, 1467
BseMI	GCAATG	1 cut(s)	9
BseMII	CTCAG	4 cut(s)	255, 927, 1502, 2007
BseRI	GAGGAG	2 cut(s)	1450, 1476
BseSI	GKGCMC	2 cut(s)	550, 1105
BsgI	GTGCAG	3 cut(s)	519, 570, 2190
Bsh1236I	CGCG	2 cut(s)	1465, 2064
BshFI	GGCC	9 cut(s)	347, 559, 704, 733, 1250, 1409, 1471, 1650, 2042
BshNI	GGYRCC	1 cut(s)	1610
BsiHKAI	GWGCWC	4 cut(s)	550, 755, 837, 1105
BsiHKCI	CYCGRG	1 cut(s)	705
BsiSI	CCGG	1 cut(s)	1251
BslFI	GGGAC	3 cut(s)	691, 1739, 1961
BslI	CCNNNNNNNGG	5 cut(s)	199, 285, 492, 740, 1467
BsmAI	GTCTC	4 cut(s)	244, 585, 823, 2155
BsmFI	GGGAC	3 cut(s)	691, 1739, 1961
BsmI	GAATGC	1 cut(s)	875
BsnI	GGCC	9 cut(s)	347, 559, 704, 733, 1250, 1409, 1471, 1650, 2042
Bso31I	GGTCTC	1 cut(s)	2155
BsoBI	CYCGRG	1 cut(s)	705
Bsp1286I	GDGCHC	4 cut(s)	550, 755, 837, 1105
Bsp1720I	GCTNAGC	1 cut(s)	913
Bsp19I	CCATGG	2 cut(s)	962, 1815
Bsp68I	TCGCGA	2 cut(s)	1465, 2064
BspACI	CCGC	2 cut(s)	744, 1747
BspANI	GGCC	9 cut(s)	347, 559, 704, 733, 1250, 1409, 1471, 1650, 2042
BspCNI	CTCAG	4 cut(s)	254, 926, 1501, 2006
BspFNI	CGCG	2 cut(s)	1465, 2064
BspHI	TCATGA	3 cut(s)	931, 1279, 1704
BspMI	ACCTGC	3 cut(s)	533, 620, 1444
BspT107I	GGYRCC	1 cut(s)	1610
BspTI	CTTAAG	1 cut(s)	1496
BspTNI	GGTCTC	1 cut(s)	2155
BsrDI	GCAATG	1 cut(s)	9
BssECI	CCNNGG	6 cut(s)	106, 256, 699, 962, 1161, 1815
BssSI	CACGAG	1 cut(s)	588
BssT1I	CCWWGG	4 cut(s)	256, 699, 962, 1815
Bst2BI	CACGAG	1 cut(s)	588
Bst2UI	CCWGG	5 cut(s)	648, 1163, 1518, 1824, 2166
Bst4CI	ACNGT	6 cut(s)	602, 946, 976, 1735, 1975, 2002
Bst6I	CTCTTC	4 cut(s)	192, 198, 2005, 2121
BstAFI	CTTAAG	1 cut(s)	1496
BstAPI	GCANNNNNTGC	1 cut(s)	881
BstBAI	YACGTR	1 cut(s)	1318
BstC8I	GCNNGC	1 cut(s)	731
BstDSI	CCRYGG	2 cut(s)	962, 1815
BstEII	GGTNACC	1 cut(s)	2143
BstENI	CCTNNNNNAGG	2 cut(s)	197, 490
BstF5I	GGATG	4 cut(s)	226, 862, 1269, 2215
BstFNI	CGCG	2 cut(s)	1465, 2064
BstH2I	RGCGCY	1 cut(s)	864
BstHHI	GCGC	2 cut(s)	863, 1038
BstMAI	GTCTC	4 cut(s)	244, 585, 823, 2155
BstNI	CCWGG	5 cut(s)	648, 1163, 1518, 1824, 2166
BstNSI	RCATGY	2 cut(s)	533, 1480
BstPAI	GACNNNNGTC	1 cut(s)	1230
BstPI	GGTNACC	1 cut(s)	2143
BstSCI	CCNGG	5 cut(s)	646, 1161, 1516, 1822, 2164
BstSLI	GKGCMC	2 cut(s)	550, 1105
BstUI	CGCG	2 cut(s)	1465, 2064
BstV2I	GAAGAC	1 cut(s)	1664
BstX2I	RGATCY	4 cut(s)	35, 1165, 1491, 1819
BstXI	CCANNNNNNTGG	2 cut(s)	47, 447
BstYI	RGATCY	4 cut(s)	35, 1165, 1491, 1819
BsuRI	GGCC	9 cut(s)	347, 559, 704, 733, 1250, 1409, 1471, 1650, 2042
BtgI	CCRYGG	2 cut(s)	962, 1815
BtgZI	GCGATG	1 cut(s)	1154
BtsCI	GGATG	4 cut(s)	226, 862, 1269, 2215
BtsI	GCAGTG	1 cut(s)	1509
BtsIMutI	CAGTG	9 cut(s)	126, 384, 474, 536, 548, 1509, 1731, 1998, 2094
BtuMI	TCGCGA	2 cut(s)	1465, 2064
BveI	ACCTGC	3 cut(s)	533, 620, 1444
Cac8I	GCNNGC	1 cut(s)	731
CaiI	CAGNNNCTG	2 cut(s)	1979, 2000
CciI	TCATGA	3 cut(s)	931, 1279, 1704
CfoI	GCGC	2 cut(s)	863, 1038
Cfr13I	GGNCC	7 cut(s)	50, 431, 557, 703, 1408, 1469, 2040
CseI	GACGC	2 cut(s)	1317, 1669
CsiI	ACCWGGT	1 cut(s)	2164
Csp6I	GTAC	6 cut(s)	160, 514, 563, 987, 1298, 1319
CviQI	GTAC	6 cut(s)	160, 514, 563, 987, 1298, 1319
DraIII	CACNNNGTG	1 cut(s)	827
EaeI	YGGCCR	2 cut(s)	731, 1248
Eam1104I	CTCTTC	4 cut(s)	192, 198, 2005, 2121
EarI	CTCTTC	4 cut(s)	192, 198, 2005, 2121
Eco130I	CCWWGG	4 cut(s)	256, 699, 962, 1815
Eco147I	AGGCCT	1 cut(s)	1650
Eco31I	GGTCTC	1 cut(s)	2155
Eco32I	GATATC	1 cut(s)	1507
Eco47I	GGWCC	2 cut(s)	50, 431
Eco57I	CTGAAG	3 cut(s)	1152, 1676, 1932
Eco88I	CYCGRG	1 cut(s)	705
Eco91I	GGTNACC	1 cut(s)	2143
EcoNI	CCTNNNNNAGG	2 cut(s)	197, 490
EcoO65I	GGTNACC	1 cut(s)	2143
EcoRI	GAATTC	2 cut(s)	101, 2058
EcoRII	CCWGG	5 cut(s)	646, 1161, 1516, 1822, 2164
EcoRV	GATATC	1 cut(s)	1507
EcoT14I	CCWWGG	4 cut(s)	256, 699, 962, 1815
ErhI	CCWWGG	4 cut(s)	256, 699, 962, 1815
FaqI	GGGAC	3 cut(s)	691, 1739, 1961
FauNDI	CATATG	1 cut(s)	2047
FokI	GGATG	4 cut(s)	213, 869, 1276, 2222
FspBI	CTAG	3 cut(s)	1223, 1287, 1859
GlaI	GCGC	2 cut(s)	862, 1037
GsuI	CTGGAG	3 cut(s)	669, 1659, 1696
HaeII	RGCGCY	1 cut(s)	864
HaeIII	GGCC	9 cut(s)	347, 559, 704, 733, 1250, 1409, 1471, 1650, 2042
HapII	CCGG	1 cut(s)	1251
HgaI	GACGC	2 cut(s)	1317, 1669
HhaI	GCGC	2 cut(s)	863, 1038
Hin6I	GCGC	2 cut(s)	861, 1036
HinP1I	GCGC	2 cut(s)	861, 1036
HincII	GTYRAC	2 cut(s)	1235, 1951
HindII	GTYRAC	2 cut(s)	1235, 1951
HindIII	AAGCTT	1 cut(s)	1008
HinfI	GANTC	8 cut(s)	89, 401, 456, 1267, 1588, 1604, 1738, 2230
HpaII	CCGG	1 cut(s)	1251
HphI	GGTGA	5 cut(s)	314, 368, 758, 1189, 2135
Hpy166II	GTNNAC	7 cut(s)	53, 77, 548, 580, 1103, 1235, 1951
Hpy188III	TCNNGA	9 cut(s)	74, 380, 932, 998, 1280, 1464, 1705, 2063, 2104
Hpy8I	GTNNAC	7 cut(s)	53, 77, 548, 580, 1103, 1235, 1951
Hpy99I	CGWCG	1 cut(s)	628
HpyAV	CCTTC	6 cut(s)	337, 582, 1168, 1174, 1661, 1974
HpyCH4III	ACNGT	6 cut(s)	602, 946, 976, 1735, 1975, 2002
HpyCH4IV	ACGT	3 cut(s)	79, 234, 1317
HpySE526I	ACGT	3 cut(s)	79, 234, 1317
HspAI	GCGC	2 cut(s)	861, 1036
LmnI	GCTCC	9 cut(s)	506, 650, 698, 980, 1253, 1444, 1519, 1921, 2092
LweI	GCATC	5 cut(s)	235, 925, 1126, 1131, 1887
MabI	ACCWGGT	1 cut(s)	2164
MaeI	CTAG	3 cut(s)	1223, 1287, 1859
MaeII	ACGT	3 cut(s)	79, 234, 1317
MaeIII	GTNAC	6 cut(s)	416, 946, 1597, 1996, 2002, 2143
MfeI	CAATTG	1 cut(s)	867
MflI	RGATCY	4 cut(s)	35, 1165, 1491, 1819
MhlI	GDGCHC	4 cut(s)	550, 755, 837, 1105
MlsI	TGGCCA	1 cut(s)	733
MluNI	TGGCCA	1 cut(s)	733
MlyI	GAGTC	1 cut(s)	2239
MmeI	TCCRAC	3 cut(s)	958, 2053, 2187
Mox20I	TGGCCA	1 cut(s)	733
MroXI	GAANNNNTTC	2 cut(s)	1054, 2135
MscI	TGGCCA	1 cut(s)	733
MseI	TTAA	5 cut(s)	251, 596, 1338, 1497, 1764
MslI	CAYNNNNRTG	4 cut(s)	45, 389, 445, 1616
Msp20I	TGGCCA	1 cut(s)	733
MspA1I	CMGCKG	1 cut(s)	212
MspCI	CTTAAG	1 cut(s)	1496
MspI	CCGG	1 cut(s)	1251
MspR9I	CCNGG	5 cut(s)	648, 1163, 1518, 1824, 2166
MunI	CAATTG	1 cut(s)	867
Mva1269I	GAATGC	1 cut(s)	875
MvaI	CCWGG	5 cut(s)	648, 1163, 1518, 1824, 2166
MvnI	CGCG	2 cut(s)	1465, 2064
NcoI	CCATGG	2 cut(s)	962, 1815
NdeI	CATATG	1 cut(s)	2047
NmuCI	GTSAC	4 cut(s)	416, 946, 1996, 2002
NruI	TCGCGA	2 cut(s)	1465, 2064
NspI	RCATGY	2 cut(s)	533, 1480
OliI	CACNNNNGTG	1 cut(s)	389
PagI	TCATGA	3 cut(s)	931, 1279, 1704
PaqCI	CACCTGC	2 cut(s)	533, 620
PceI	AGGCCT	1 cut(s)	1650
PctI	GAATGC	1 cut(s)	875
PdmI	GAANNNNTTC	2 cut(s)	1054, 2135
PfeI	GAWTC	7 cut(s)	89, 401, 456, 1267, 1588, 1604, 1738
PflMI	CCANNNNNTGG	1 cut(s)	740
PfoI	TCCNGGA	1 cut(s)	646
PleI	GAGTC	1 cut(s)	2238
PpsI	GAGTC	1 cut(s)	2238
Ppu21I	YACGTR	1 cut(s)	1318
PshAI	GACNNNNGTC	1 cut(s)	1230
PshBI	ATTAAT	1 cut(s)	1338
PsiI	TTATAA	5 cut(s)	720, 1094, 1344, 1403, 1923
Psp1406I	AACGTT	1 cut(s)	234
Psp6I	CCWGG	5 cut(s)	646, 1161, 1516, 1822, 2164
PspEI	GGTNACC	1 cut(s)	2143
PspGI	CCWGG	5 cut(s)	646, 1161, 1516, 1822, 2164
PspPI	GGNCC	7 cut(s)	50, 431, 557, 703, 1408, 1469, 2040
PstNI	CAGNNNCTG	2 cut(s)	1979, 2000
PsuI	RGATCY	4 cut(s)	35, 1165, 1491, 1819
PvuII	CAGCTG	1 cut(s)	212
RruI	TCGCGA	2 cut(s)	1465, 2064
RsaI	GTAC	6 cut(s)	161, 515, 564, 988, 1299, 1320
RsaNI	GTAC	6 cut(s)	160, 514, 563, 987, 1298, 1319
RseI	CAYNNNNRTG	4 cut(s)	45, 389, 445, 1616
SaqAI	TTAA	5 cut(s)	251, 596, 1338, 1497, 1764
Sau96I	GGNCC	7 cut(s)	50, 431, 557, 703, 1408, 1469, 2040
ScaI	AGTACT	2 cut(s)	564, 988
SchI	GAGTC	1 cut(s)	2239
ScrFI	CCNGG	5 cut(s)	648, 1163, 1518, 1824, 2166
SduI	GDGCHC	4 cut(s)	550, 755, 837, 1105
SexAI	ACCWGGT	1 cut(s)	2164
SfaNI	GCATC	5 cut(s)	235, 925, 1126, 1131, 1887
SinI	GGWCC	2 cut(s)	50, 431
SmiMI	CAYNNNNRTG	4 cut(s)	45, 389, 445, 1616
SmlI	CTYRAG	2 cut(s)	1040, 1496
SmoI	CTYRAG	2 cut(s)	1040, 1496
SseBI	AGGCCT	1 cut(s)	1650
SsiI	CCGC	2 cut(s)	744, 1747
SspMI	CTAG	3 cut(s)	1223, 1287, 1859
StuI	AGGCCT	1 cut(s)	1650
StyD4I	CCNGG	5 cut(s)	646, 1161, 1516, 1822, 2164
StyI	CCWWGG	4 cut(s)	256, 699, 962, 1815
TaaI	ACNGT	6 cut(s)	602, 946, 976, 1735, 1975, 2002
TaiI	ACGT	3 cut(s)	82, 237, 1320
TaqI	TCGA	4 cut(s)	399, 567, 623, 997
TatI	WGTACW	3 cut(s)	562, 986, 1297
TfiI	GAWTC	7 cut(s)	89, 401, 456, 1267, 1588, 1604, 1738
Tru1I	TTAA	5 cut(s)	251, 596, 1338, 1497, 1764
Tru9I	TTAA	5 cut(s)	251, 596, 1338, 1497, 1764
TscAI	CASTG	9 cut(s)	133, 391, 481, 543, 555, 1516, 1738, 2005, 2094
TseFI	GTSAC	4 cut(s)	416, 946, 1996, 2002
Tsp45I	GTSAC	4 cut(s)	416, 946, 1996, 2002
TspDTI	ATGAA	6 cut(s)	114, 273, 798, 1435, 1671, 1750
TspGWI	ACGGA	3 cut(s)	327, 1013, 1581
TspRI	CASTG	9 cut(s)	133, 391, 481, 543, 555, 1516, 1738, 2005, 2094
Van91I	CCANNNNNTGG	1 cut(s)	740
Vha464I	CTTAAG	1 cut(s)	1496
VneI	GTGCAC	2 cut(s)	546, 1101
VpaK11BI	GGWCC	2 cut(s)	50, 431
VspI	ATTAAT	1 cut(s)	1338
XagI	CCTNNNNNAGG	2 cut(s)	197, 490
XapI	RAATTY	8 cut(s)	101, 289, 737, 922, 1188, 1375, 2058, 2076
XceI	RCATGY	2 cut(s)	533, 1480
XmnI	GAANNNNTTC	2 cut(s)	1054, 2135
XspI	CTAG	3 cut(s)	1223, 1287, 1859
ZrmI	AGTACT	2 cut(s)	564, 988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.