Phospholipase D
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1056700.v1.1 |
| rosa_laevigata | RLG00000007304 RLG00000009447 RLG00000014908 RLG00000028056 |
| rosa_roxburghii | Rroxscaffold_3G00226050 |
| rosa_rugosa | Rorug05G0109200 Rorug05G0329000 |
| rosa_samantha | Rh1AG196300 Rh1AG230200 Rh1BG040100 Rh1BG180000 Rh1CG025500 Rh1DG045300 Rh2BG005300 Rh2BG072000 Rh2BG137900 Rh2BG615700 Rh2CG004100 Rh2CG170500 Rh4CG429800 Rh5CG009500 Rh5CG163900 Rh5CG240800 Rh7CG004600 Rh7CG274900 |
| rosa_wichuraiana | Rw4G014150 Rw4G033960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 209 |
| AclWI | GGATC | 1 cut(s) | 19 |
| AgsI | TTSAA | 3 cut(s) | 66, 122, 147 |
| AluBI | AGCT | 1 cut(s) | 175 |
| AluI | AGCT | 1 cut(s) | 175 |
| AlwI | GGATC | 1 cut(s) | 19 |
| Aor13HI | TCCGGA | 1 cut(s) | 209 |
| AoxI | GGCC | 1 cut(s) | 115 |
| ApeKI | GCWGC | 1 cut(s) | 229 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 142 |
| AspS9I | GGNCC | 1 cut(s) | 180 |
| AvaII | GGWCC | 1 cut(s) | 180 |
| BauI | CACGAG | 1 cut(s) | 187 |
| BbvI | GCAGC | 1 cut(s) | 216 |
| BciVI | GTATCC | 1 cut(s) | 117 |
| BfaI | CTAG | 1 cut(s) | 238 |
| BfmI | CTRYAG | 1 cut(s) | 111 |
| BfuI | GTATCC | 1 cut(s) | 117 |
| BisI | GCNGC | 1 cut(s) | 230 |
| BlsI | GCNGC | 1 cut(s) | 231 |
| Bme18I | GGWCC | 1 cut(s) | 180 |
| BmgT120I | GGNCC | 1 cut(s) | 180 |
| BmsI | GCATC | 1 cut(s) | 71 |
| BoxI | GACNNNNGTC | 1 cut(s) | 98 |
| Bpu10I | CCTNAGC | 1 cut(s) | 176 |
| BpuEI | CTTGAG | 1 cut(s) | 33 |
| BsaWI | WCCGGW | 2 cut(s) | 209, 220 |
| BseAI | TCCGGA | 1 cut(s) | 209 |
| BseGI | GGATG | 1 cut(s) | 86 |
| BseRI | GAGGAG | 1 cut(s) | 175 |
| BseXI | GCAGC | 1 cut(s) | 216 |
| BshFI | GGCC | 1 cut(s) | 117 |
| BsiSI | CCGG | 2 cut(s) | 210, 221 |
| BsnI | GGCC | 1 cut(s) | 117 |
| Bsp13I | TCCGGA | 1 cut(s) | 209 |
| Bsp143I | GATC | 1 cut(s) | 24 |
| BspANI | GGCC | 1 cut(s) | 117 |
| BspEI | TCCGGA | 1 cut(s) | 209 |
| BspMAI | CTGCAG | 1 cut(s) | 115 |
| BspPI | GGATC | 1 cut(s) | 19 |
| BssMI | GATC | 1 cut(s) | 24 |
| BssSI | CACGAG | 1 cut(s) | 187 |
| Bst2BI | CACGAG | 1 cut(s) | 187 |
| BstC8I | GCNNGC | 1 cut(s) | 115 |
| BstDEI | CTNAG | 1 cut(s) | 176 |
| BstF5I | GGATG | 1 cut(s) | 86 |
| BstKTI | GATC | 1 cut(s) | 27 |
| BstMBI | GATC | 1 cut(s) | 24 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 98 |
| BstSFI | CTRYAG | 1 cut(s) | 111 |
| BstV1I | GCAGC | 1 cut(s) | 216 |
| BstX2I | RGATCY | 1 cut(s) | 24 |
| BstYI | RGATCY | 1 cut(s) | 24 |
| BsuI | GTATCC | 1 cut(s) | 117 |
| BsuRI | GGCC | 1 cut(s) | 117 |
| BtsCI | GGATG | 1 cut(s) | 86 |
| Cac8I | GCNNGC | 1 cut(s) | 115 |
| Cfr13I | GGNCC | 1 cut(s) | 180 |
| CviAII | CATG | 2 cut(s) | 85, 226 |
| CviJI | RGCY | 5 cut(s) | 5, 117, 153, 175, 237 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 117, 153, 175, 237 |
| DdeI | CTNAG | 1 cut(s) | 176 |
| DpnI | GATC | 1 cut(s) | 26 |
| DpnII | GATC | 1 cut(s) | 24 |
| Eco147I | AGGCCT | 1 cut(s) | 117 |
| Eco47I | GGWCC | 1 cut(s) | 180 |
| EcoO109I | RGGNCCY | 1 cut(s) | 180 |
| EcoT22I | ATGCAT | 1 cut(s) | 86 |
| FaeI | CATG | 2 cut(s) | 88, 229 |
| FaiI | YATR | 3 cut(s) | 86, 217, 227 |
| FatI | CATG | 2 cut(s) | 84, 225 |
| Fnu4HI | GCNGC | 1 cut(s) | 230 |
| FokI | GGATG | 1 cut(s) | 93 |
| Fsp4HI | GCNGC | 1 cut(s) | 230 |
| FspBI | CTAG | 1 cut(s) | 238 |
| GluI | GCNGC | 1 cut(s) | 230 |
| HaeIII | GGCC | 1 cut(s) | 117 |
| HapII | CCGG | 2 cut(s) | 210, 221 |
| Hin1II | CATG | 2 cut(s) | 88, 229 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HpaII | CCGG | 2 cut(s) | 210, 221 |
| Hpy188III | TCNNGA | 1 cut(s) | 210 |
| HpyAV | CCTTC | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 2 cut(s) | 84, 113 |
| HpyF3I | CTNAG | 1 cut(s) | 176 |
| Hsp92II | CATG | 2 cut(s) | 88, 229 |
| Kpn2I | TCCGGA | 1 cut(s) | 209 |
| Kzo9I | GATC | 1 cut(s) | 24 |
| LpnPI | CCDG | 4 cut(s) | 99, 123, 223, 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 216 |
| LweI | GCATC | 1 cut(s) | 71 |
| MaeI | CTAG | 1 cut(s) | 238 |
| MalI | GATC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 24 |
| MflI | RGATCY | 1 cut(s) | 24 |
| MluCI | AATT | 2 cut(s) | 68, 147 |
| MnlI | CCTC | 5 cut(s) | 52, 164, 193, 196, 227 |
| Mph1103I | ATGCAT | 1 cut(s) | 86 |
| MroI | TCCGGA | 1 cut(s) | 209 |
| MroXI | GAANNNNTTC | 1 cut(s) | 142 |
| MseI | TTAA | 1 cut(s) | 36 |
| MspI | CCGG | 2 cut(s) | 210, 221 |
| NdeII | GATC | 1 cut(s) | 24 |
| NlaIII | CATG | 2 cut(s) | 88, 229 |
| NsiI | ATGCAT | 1 cut(s) | 86 |
| PceI | AGGCCT | 1 cut(s) | 117 |
| PdmI | GAANNNNTTC | 1 cut(s) | 142 |
| PkrI | GCNGC | 1 cut(s) | 231 |
| PpuMI | RGGWCCY | 1 cut(s) | 180 |
| PshAI | GACNNNNGTC | 1 cut(s) | 98 |
| Psp5II | RGGWCCY | 1 cut(s) | 180 |
| PspPI | GGNCC | 1 cut(s) | 180 |
| PspPPI | RGGWCCY | 1 cut(s) | 180 |
| PstI | CTGCAG | 1 cut(s) | 115 |
| PsuI | RGATCY | 1 cut(s) | 24 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 1 cut(s) | 230 |
| Sau3AI | GATC | 1 cut(s) | 24 |
| Sau96I | GGNCC | 1 cut(s) | 180 |
| SbfI | CCTGCAGG | 1 cut(s) | 115 |
| SdaI | CCTGCAGG | 1 cut(s) | 115 |
| SetI | ASST | 5 cut(s) | 36, 63, 145, 177, 185 |
| SfaNI | GCATC | 1 cut(s) | 71 |
| SfcI | CTRYAG | 1 cut(s) | 111 |
| SinI | GGWCC | 1 cut(s) | 180 |
| SmlI | CTYRAG | 1 cut(s) | 48 |
| SmoI | CTYRAG | 1 cut(s) | 48 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 115 |
| Sse9I | AATT | 2 cut(s) | 68, 147 |
| SseBI | AGGCCT | 1 cut(s) | 117 |
| SspMI | CTAG | 1 cut(s) | 238 |
| StuI | AGGCCT | 1 cut(s) | 117 |
| TaqI | TCGA | 1 cut(s) | 156 |
| TasI | AATT | 2 cut(s) | 68, 147 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseI | GCWGC | 1 cut(s) | 229 |
| VpaK11BI | GGWCC | 1 cut(s) | 180 |
| XmnI | GAANNNNTTC | 1 cut(s) | 142 |
| XspI | CTAG | 1 cut(s) | 238 |
| Zsp2I | ATGCAT | 1 cut(s) | 86 |