Phospholipase D
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1056700.v1.1 |
| rosa_laevigata | RLG00000007304 RLG00000009447 RLG00000014908 RLG00000028056 |
| rosa_roxburghii | Rroxscaffold_3G00226050 |
| rosa_rugosa | Rorug05G0109200 Rorug05G0329000 |
| rosa_samantha | Rh1AG196300 Rh1AG230200 Rh1BG040100 Rh1BG180000 Rh1CG025500 Rh1DG045300 Rh2BG005300 Rh2BG072000 Rh2BG137900 Rh2BG615700 Rh2CG004100 Rh2CG170500 Rh4CG429800 Rh5CG009500 Rh5CG163900 Rh5CG240800 Rh7CG004600 Rh7CG274900 |
| rosa_wichuraiana | Rw4G014150 Rw4G033960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 50 |
| Acc36I | ACCTGC | 1 cut(s) | 50 |
| AccB1I | GGYRCC | 1 cut(s) | 167 |
| AciI | CCGC | 2 cut(s) | 25, 109 |
| AclWI | GGATC | 1 cut(s) | 218 |
| AcsI | RAATTY | 1 cut(s) | 204 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 115, 186 |
| Alw26I | GTCTC | 1 cut(s) | 16 |
| AlwI | GGATC | 1 cut(s) | 218 |
| ApoI | RAATTY | 1 cut(s) | 204 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 56, 88 |
| AspS9I | GGNCC | 2 cut(s) | 106, 118 |
| AsuC2I | CCSGG | 1 cut(s) | 181 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 130 |
| AvaII | GGWCC | 2 cut(s) | 106, 118 |
| BanI | GGYRCC | 1 cut(s) | 167 |
| BbsI | GAAGAC | 1 cut(s) | 165 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 134, 168 |
| BcnI | CCSGG | 1 cut(s) | 181 |
| BcoDI | GTCTC | 1 cut(s) | 16 |
| BfuAI | ACCTGC | 1 cut(s) | 50 |
| Bme1390I | CCNGG | 1 cut(s) | 181 |
| Bme18I | GGWCC | 2 cut(s) | 106, 118 |
| BmgT120I | GGNCC | 2 cut(s) | 106, 118 |
| BmiI | GGNNCC | 3 cut(s) | 100, 169, 226 |
| BmrFI | CCNGG | 1 cut(s) | 181 |
| BpiI | GAAGAC | 1 cut(s) | 165 |
| BpuMI | CCSGG | 1 cut(s) | 181 |
| BsaJI | CCNNGG | 2 cut(s) | 94, 102 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 115, 186 |
| Bse1I | ACTGG | 1 cut(s) | 242 |
| BseDI | CCNNGG | 2 cut(s) | 94, 102 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 115, 186 |
| BseNI | ACTGG | 1 cut(s) | 242 |
| BsgI | GTGCAG | 1 cut(s) | 43 |
| BshNI | GGYRCC | 1 cut(s) | 167 |
| BsiSI | CCGG | 1 cut(s) | 181 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 115, 186 |
| BsmAI | GTCTC | 1 cut(s) | 16 |
| BsmBI | CGTCTC | 1 cut(s) | 16 |
| Bsp143I | GATC | 1 cut(s) | 210 |
| Bsp19I | CCATGG | 1 cut(s) | 94 |
| BspACI | CCGC | 2 cut(s) | 25, 109 |
| BspLI | GGNNCC | 3 cut(s) | 100, 169, 226 |
| BspMI | ACCTGC | 1 cut(s) | 50 |
| BspPI | GGATC | 1 cut(s) | 218 |
| BspT107I | GGYRCC | 1 cut(s) | 167 |
| BsrI | ACTGG | 1 cut(s) | 242 |
| BssECI | CCNNGG | 2 cut(s) | 94, 102 |
| BssMI | GATC | 1 cut(s) | 210 |
| BssT1I | CCWWGG | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 2 cut(s) | 52, 167 |
| BstDSI | CCRYGG | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 213 |
| BstMAI | GTCTC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 210 |
| BstSCI | CCNGG | 1 cut(s) | 179 |
| BstV2I | GAAGAC | 1 cut(s) | 165 |
| BstX2I | RGATCY | 1 cut(s) | 210 |
| BstYI | RGATCY | 1 cut(s) | 210 |
| BtgI | CCRYGG | 1 cut(s) | 94 |
| BveI | ACCTGC | 1 cut(s) | 50 |
| Cfr13I | GGNCC | 2 cut(s) | 106, 118 |
| CviAII | CATG | 2 cut(s) | 95, 217 |
| CviJI | RGCY | 2 cut(s) | 101, 190 |
| CviKI_1 | RGCY | 2 cut(s) | 101, 190 |
| DpnI | GATC | 1 cut(s) | 212 |
| DpnII | GATC | 1 cut(s) | 210 |
| EciI | GGCGGA | 1 cut(s) | 14 |
| Eco130I | CCWWGG | 1 cut(s) | 94 |
| Eco47I | GGWCC | 2 cut(s) | 106, 118 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoRI | GAATTC | 1 cut(s) | 204 |
| EcoT14I | CCWWGG | 1 cut(s) | 94 |
| ErhI | CCWWGG | 1 cut(s) | 94 |
| Esp3I | CGTCTC | 1 cut(s) | 16 |
| FaeI | CATG | 2 cut(s) | 98, 220 |
| FaiI | YATR | 4 cut(s) | 96, 153, 218, 232 |
| FatI | CATG | 2 cut(s) | 94, 216 |
| HapII | CCGG | 1 cut(s) | 181 |
| Hin1II | CATG | 2 cut(s) | 98, 220 |
| HincII | GTYRAC | 1 cut(s) | 55 |
| HindII | GTYRAC | 1 cut(s) | 55 |
| HinfI | GANTC | 4 cut(s) | 21, 65, 146, 238 |
| HpaII | CCGG | 1 cut(s) | 181 |
| HphI | GGTGA | 2 cut(s) | 28, 130 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 210 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| Hpy99I | CGWCG | 1 cut(s) | 167 |
| HpyAV | CCTTC | 1 cut(s) | 109 |
| HpyCH4III | ACNGT | 2 cut(s) | 52, 167 |
| HpyCH4V | TGCA | 1 cut(s) | 60 |
| Hsp92II | CATG | 2 cut(s) | 98, 220 |
| Kzo9I | GATC | 1 cut(s) | 210 |
| LmnI | GCTCC | 1 cut(s) | 98 |
| LpnPI | CCDG | 4 cut(s) | 55, 154, 171, 194 |
| MalI | GATC | 1 cut(s) | 212 |
| MboI | GATC | 1 cut(s) | 210 |
| MboII | GAAGA | 2 cut(s) | 170, 205 |
| MflI | RGATCY | 1 cut(s) | 210 |
| MluCI | AATT | 1 cut(s) | 204 |
| MlyI | GAGTC | 4 cut(s) | 15, 59, 140, 247 |
| MnlI | CCTC | 3 cut(s) | 38, 80, 97 |
| MspI | CCGG | 1 cut(s) | 181 |
| MspR9I | CCNGG | 1 cut(s) | 181 |
| NciI | CCSGG | 1 cut(s) | 181 |
| NcoI | CCATGG | 1 cut(s) | 94 |
| NdeII | GATC | 1 cut(s) | 210 |
| NlaIII | CATG | 2 cut(s) | 98, 220 |
| NlaIV | GGNNCC | 3 cut(s) | 100, 169, 226 |
| NmeAIII | GCCGAG | 1 cut(s) | 127 |
| PaqCI | CACCTGC | 1 cut(s) | 50 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 168 |
| PflFI | GACNNNGTC | 3 cut(s) | 8, 50, 181 |
| PleI | GAGTC | 4 cut(s) | 15, 59, 140, 246 |
| PpsI | GAGTC | 4 cut(s) | 15, 59, 140, 246 |
| PspN4I | GGNNCC | 3 cut(s) | 100, 169, 226 |
| PspPI | GGNCC | 2 cut(s) | 106, 118 |
| PsuI | RGATCY | 1 cut(s) | 210 |
| PsyI | GACNNNGTC | 3 cut(s) | 8, 50, 181 |
| Sau3AI | GATC | 1 cut(s) | 210 |
| Sau96I | GGNCC | 2 cut(s) | 106, 118 |
| SchI | GAGTC | 4 cut(s) | 15, 59, 140, 247 |
| ScrFI | CCNGG | 1 cut(s) | 181 |
| SetI | ASST | 1 cut(s) | 44 |
| SinI | GGWCC | 2 cut(s) | 106, 118 |
| Sse9I | AATT | 1 cut(s) | 204 |
| SsiI | CCGC | 2 cut(s) | 25, 109 |
| StyD4I | CCNGG | 1 cut(s) | 179 |
| StyI | CCWWGG | 1 cut(s) | 94 |
| TaaI | ACNGT | 2 cut(s) | 52, 167 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TasI | AATT | 1 cut(s) | 204 |
| TspDTI | ATGAA | 1 cut(s) | 205 |
| Tth111I | GACNNNGTC | 3 cut(s) | 8, 50, 181 |
| VpaK11BI | GGWCC | 2 cut(s) | 106, 118 |
| XapI | RAATTY | 1 cut(s) | 204 |