isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g02130 FvH4_4g19090 FvH4_4g19090 FvH4_4g19090 FvH4_4g19090 |
| malus_domestica | MD02G1308900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0316701 RchiOBHm_Chr1g0322201 RchiOBHm_Chr1g0331421 |
| rosa_laevigata | RLG00000001007 RLG00000015282 RLG00000018939 RLG00000021189 RLG00000022243 RLG00000026167 RLG00000032388 |
| rosa_multiflora | Rmu_sc0002667.1_g000001 Rmu_sc0005467.1_g000011 Rmu_sc0006942.1_g000001 Rmu_sc0007199.1_g000009 Rmu_sc0011314.1_g000010 |
| rosa_roxburghii | Rroxscaffold_6G00406050 Rroxscaffold_7G00160900 |
| rosa_samantha | Rh1AG023400 Rh1CG020200 Rh1CG022200 Rh1DG017900 Rh1DG020300 Rh1DG020900 Rh2AG275200 Rh2BG437500 Rh3DG271900 Rh4BG003200 Rh4BG137900 Rh4CG142900 Rh4DG257100 Rh5AG116000 Rh6CG275000 Rh7DG386000 |
| rosa_wichuraiana | Rw1G001510 Rw1G001710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 304 |
| AccII | CGCG | 1 cut(s) | 69 |
| AccIII | TCCGGA | 1 cut(s) | 91 |
| AciI | CCGC | 2 cut(s) | 112, 496 |
| AclWI | GGATC | 1 cut(s) | 285 |
| AcsI | RAATTY | 2 cut(s) | 321, 490 |
| AdeI | CACNNNGTG | 1 cut(s) | 229 |
| AfaI | GTAC | 1 cut(s) | 409 |
| AgsI | TTSAA | 2 cut(s) | 382, 512 |
| AluBI | AGCT | 3 cut(s) | 458, 503, 515 |
| AluI | AGCT | 3 cut(s) | 458, 503, 515 |
| AlwI | GGATC | 1 cut(s) | 285 |
| Aor13HI | TCCGGA | 1 cut(s) | 91 |
| ApeKI | GCWGC | 1 cut(s) | 500 |
| ApoI | RAATTY | 2 cut(s) | 321, 490 |
| AspLEI | GCGC | 2 cut(s) | 69, 71 |
| BbvI | GCAGC | 1 cut(s) | 512 |
| BccI | CCATC | 2 cut(s) | 398, 470 |
| BclI | TGATCA | 1 cut(s) | 331 |
| BisI | GCNGC | 1 cut(s) | 501 |
| BlsI | GCNGC | 1 cut(s) | 502 |
| BmsI | GCATC | 1 cut(s) | 356 |
| BpmI | CTGGAG | 1 cut(s) | 203 |
| BpuEI | CTTGAG | 2 cut(s) | 226, 444 |
| BsaAI | YACGTR | 1 cut(s) | 356 |
| BsaWI | WCCGGW | 2 cut(s) | 91, 252 |
| Bse3DI | GCAATG | 3 cut(s) | 62, 312, 492 |
| BseAI | TCCGGA | 1 cut(s) | 91 |
| BseGI | GGATG | 5 cut(s) | 12, 100, 371, 409, 481 |
| BseMI | GCAATG | 3 cut(s) | 62, 312, 492 |
| BseMII | CTCAG | 1 cut(s) | 204 |
| BsePI | GCGCGC | 1 cut(s) | 67 |
| BseRI | GAGGAG | 1 cut(s) | 141 |
| BseXI | GCAGC | 1 cut(s) | 512 |
| BseYI | CCCAGC | 1 cut(s) | 503 |
| Bsh1236I | CGCG | 1 cut(s) | 69 |
| BsiSI | CCGG | 2 cut(s) | 92, 253 |
| BslFI | GGGAC | 1 cut(s) | 493 |
| BsmFI | GGGAC | 1 cut(s) | 493 |
| Bsp13I | TCCGGA | 1 cut(s) | 91 |
| Bsp143I | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| BspACI | CCGC | 2 cut(s) | 112, 496 |
| BspCNI | CTCAG | 1 cut(s) | 205 |
| BspEI | TCCGGA | 1 cut(s) | 91 |
| BspFNI | CGCG | 1 cut(s) | 69 |
| BspPI | GGATC | 1 cut(s) | 285 |
| BsrDI | GCAATG | 3 cut(s) | 62, 312, 492 |
| BssHII | GCGCGC | 1 cut(s) | 67 |
| BssMI | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| Bst6I | CTCTTC | 1 cut(s) | 159 |
| BstBAI | YACGTR | 1 cut(s) | 356 |
| BstC8I | GCNNGC | 2 cut(s) | 69, 498 |
| BstDEI | CTNAG | 3 cut(s) | 213, 308, 424 |
| BstF5I | GGATG | 5 cut(s) | 12, 100, 371, 409, 481 |
| BstFNI | CGCG | 1 cut(s) | 69 |
| BstHHI | GCGC | 2 cut(s) | 69, 71 |
| BstKTI | GATC | 5 cut(s) | 12, 120, 171, 280, 334 |
| BstMBI | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 68 |
| BstSNI | TACGTA | 1 cut(s) | 356 |
| BstUI | CGCG | 1 cut(s) | 69 |
| BstV1I | GCAGC | 1 cut(s) | 512 |
| BtsCI | GGATG | 5 cut(s) | 12, 100, 371, 409, 481 |
| Cac8I | GCNNGC | 2 cut(s) | 69, 498 |
| CfoI | GCGC | 2 cut(s) | 69, 71 |
| Csp6I | GTAC | 1 cut(s) | 408 |
| CviAII | CATG | 3 cut(s) | 241, 344, 433 |
| CviJI | RGCY | 5 cut(s) | 42, 458, 503, 508, 515 |
| CviKI_1 | RGCY | 5 cut(s) | 42, 458, 503, 508, 515 |
| CviQI | GTAC | 1 cut(s) | 408 |
| DdeI | CTNAG | 3 cut(s) | 213, 308, 424 |
| DpnI | GATC | 5 cut(s) | 11, 119, 170, 279, 333 |
| DpnII | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| DraIII | CACNNNGTG | 1 cut(s) | 229 |
| Eam1104I | CTCTTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 1 cut(s) | 159 |
| Eco105I | TACGTA | 1 cut(s) | 356 |
| FaeI | CATG | 3 cut(s) | 244, 347, 436 |
| FaiI | YATR | 5 cut(s) | 130, 138, 242, 345, 434 |
| FaqI | GGGAC | 1 cut(s) | 493 |
| FatI | CATG | 3 cut(s) | 240, 343, 432 |
| FauI | CCCGC | 1 cut(s) | 489 |
| FbaI | TGATCA | 1 cut(s) | 331 |
| FblI | GTMKAC | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 1 cut(s) | 501 |
| FokI | GGATG | 5 cut(s) | 19, 107, 378, 416, 488 |
| Fsp4HI | GCNGC | 1 cut(s) | 501 |
| GlaI | GCGC | 2 cut(s) | 68, 70 |
| GluI | GCNGC | 1 cut(s) | 501 |
| GsaI | CCCAGC | 1 cut(s) | 507 |
| GsuI | CTGGAG | 1 cut(s) | 203 |
| HapII | CCGG | 2 cut(s) | 92, 253 |
| HhaI | GCGC | 2 cut(s) | 69, 71 |
| Hin1II | CATG | 3 cut(s) | 244, 347, 436 |
| Hin6I | GCGC | 2 cut(s) | 67, 69 |
| HinP1I | GCGC | 2 cut(s) | 67, 69 |
| HinfI | GANTC | 1 cut(s) | 436 |
| HpaII | CCGG | 2 cut(s) | 92, 253 |
| Hpy166II | GTNNAC | 3 cut(s) | 125, 223, 305 |
| Hpy188I | TCNGA | 1 cut(s) | 399 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 182, 461 |
| Hpy8I | GTNNAC | 3 cut(s) | 125, 223, 305 |
| HpyAV | CCTTC | 1 cut(s) | 394 |
| HpyCH4IV | ACGT | 2 cut(s) | 219, 355 |
| HpyCH4V | TGCA | 2 cut(s) | 62, 296 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 3 cut(s) | 213, 308, 424 |
| HpySE526I | ACGT | 2 cut(s) | 219, 355 |
| Hsp92II | CATG | 3 cut(s) | 244, 347, 436 |
| HspAI | GCGC | 2 cut(s) | 67, 69 |
| Kpn2I | TCCGGA | 1 cut(s) | 91 |
| Ksp22I | TGATCA | 1 cut(s) | 331 |
| Kzo9I | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| LmnI | GCTCC | 1 cut(s) | 184 |
| LpnPI | CCDG | 6 cut(s) | 42, 72, 105, 167, 266, 489 |
| Lsp1109I | GCAGC | 1 cut(s) | 512 |
| LweI | GCATC | 1 cut(s) | 356 |
| MaeII | ACGT | 2 cut(s) | 219, 355 |
| MaeIII | GTNAC | 1 cut(s) | 194 |
| MalI | GATC | 5 cut(s) | 11, 119, 170, 279, 333 |
| MboI | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| MboII | GAAGA | 2 cut(s) | 110, 146 |
| MluCI | AATT | 2 cut(s) | 321, 490 |
| MnlI | CCTC | 6 cut(s) | 53, 93, 151, 162, 462, 466 |
| MroI | TCCGGA | 1 cut(s) | 91 |
| MseI | TTAA | 1 cut(s) | 420 |
| MspA1I | CMGCKG | 1 cut(s) | 503 |
| MspI | CCGG | 2 cut(s) | 92, 253 |
| MvnI | CGCG | 1 cut(s) | 69 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 68 |
| NdeII | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| NlaIII | CATG | 3 cut(s) | 244, 347, 436 |
| NmeAIII | GCCGAG | 1 cut(s) | 97 |
| PauI | GCGCGC | 1 cut(s) | 67 |
| PfeI | GAWTC | 1 cut(s) | 436 |
| PkrI | GCNGC | 1 cut(s) | 502 |
| Ppu21I | YACGTR | 1 cut(s) | 356 |
| PspFI | CCCAGC | 1 cut(s) | 503 |
| PteI | GCGCGC | 1 cut(s) | 67 |
| PvuII | CAGCTG | 1 cut(s) | 503 |
| RsaI | GTAC | 1 cut(s) | 409 |
| RsaNI | GTAC | 1 cut(s) | 408 |
| SaqAI | TTAA | 1 cut(s) | 420 |
| SatI | GCNGC | 1 cut(s) | 501 |
| Sau3AI | GATC | 5 cut(s) | 9, 117, 168, 277, 331 |
| SetI | ASST | 5 cut(s) | 222, 358, 460, 505, 517 |
| SfaNI | GCATC | 1 cut(s) | 356 |
| SmlI | CTYRAG | 3 cut(s) | 13, 205, 459 |
| SmoI | CTYRAG | 3 cut(s) | 13, 205, 459 |
| SnaBI | TACGTA | 1 cut(s) | 356 |
| Sse9I | AATT | 2 cut(s) | 321, 490 |
| SsiI | CCGC | 2 cut(s) | 112, 496 |
| TaiI | ACGT | 2 cut(s) | 222, 358 |
| TasI | AATT | 2 cut(s) | 321, 490 |
| TfiI | GAWTC | 1 cut(s) | 436 |
| Tru1I | TTAA | 1 cut(s) | 420 |
| Tru9I | TTAA | 1 cut(s) | 420 |
| TseI | GCWGC | 1 cut(s) | 500 |
| TspDTI | ATGAA | 4 cut(s) | 111, 363, 503, 510 |
| XapI | RAATTY | 2 cut(s) | 321, 490 |
| XmiI | GTMKAC | 1 cut(s) | 304 |