Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0004114

Physical Location & Seq

Genomic Coordinates Forward (+)

5570370 .. 5583517

Gene Structure 13148 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG073800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGCATACGTGGTGCAGTGCTGCAACATATTATGAAGGGCGAGTGTTCTCAATTCGTGGTTTTGGAAGAGATATCCCAGGGCACGAGCTTGTATCATACTGCGTTGATAGCAGCGTTGACATATATTACAGTAGTTTACATCTGCAACATGTGGCATGGCTTGAACATTGTACTCTATCCCATCTTCTTCCAACATATTTCGTAACATCAACAAAGGGGGATTTACTGGTTGTTGAGAGATTGTTGGAAGAAGACAGAACCAACATCTTCAAGCGGCGGAAAATGCTGAGGTTCAAGGTTTTCAAGTGGGTTGAATCCATTGCACAGCTAGCTGAGGGTGTTACGTTGGAGGATGTTGCCAAGAAAGGGAATGTTGATCTTCGCTTGCTCTGTGGGGTGGCTCACGGAAGATCCTGGTTCGATAGGTGGGGATACAAATTTTGGAGAGGGAGATATGGAGTAGATGAAGTGAAGTATGAGGTTGCCCTAGCTTATCTTCGTAACCTTGACATTTATCAGGTTGTTGAAGTGTTTCACAAGGTGGAGGACCAATATGCTCTAGTTCATCGTCTAGAGAGAGTACTTGAATGTTACGAAAGTCTCAGTCCTTCCCTATTCAAGACTTTAAGTGACTTGCTTGCGTTCGTGTTGACTTATCCTGCCAAATCAATGATGGCAAAAGAGGCACATACCATTGCTAGTATACCCCGCAAAAGTTGGACTAGGGACCAAATAGAGGAGGCGATACGGATACTGATCAATATACTGGATAAGAGAGGCCCTATAAGAAGGGAGGACCTCAGTGAGGCAGCTAGCTCCGAAGTGAGTCCAAGTGAGCTACTGGACTATGCAATTTCAACAATGAAGAATCTGAAGTGTGGGAAGCACCAAATTGTAGCTTGCAATGAGAATCTGATCTCAAATGTGATGGAGTATGGACTGGAGACTCTTCCTCTCCTAACAACTGAGCCCCTTGATGTTCACCGTGATGCAGTTTTTGTATATGAAACTGTTGTTCTACAATACCCCGAAGTCGGCAGTGAATATTCAATGGTGAAGTTGTGTGTAGACACCATGTTAAAGTACAATTACCTTATGAAGGGAACTGAACCATGTTGCAAAGGCTCTGGTAAAAAGGAAGTAGCTTACCAGGGTCAGATGGATATTGAGACAGAGAACAGAATAGCTGCGATTCTTATGAGAGAAGAAGCAGACTTGCAGCGCCAAGCTGAGAAGGAAGGTGTTCATGCTTATCTTCAACAACCTAAAACAAGATTTAGGCCAAATTCACGGTTCCTCAGTGCTACTGTTCCTGATGTTGAACAACCAAATAAAGCTGTGGAGGTGTATTTTTCACTTGGAACAAGTCCCATGGTAGAACATGCTGGGAGAAGAGAGCAAGATGATTGGACCAGGGGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000212 GO:0000226 GO:0000228 GO:0000280 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0006323 GO:0006355 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007059 GO:0007060 GO:0007140 GO:0007275 GO:0007276 GO:0008134 GO:0008150 GO:0009555 GO:0009889 GO:0009987 GO:0010032 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0030261 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033613 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0045132 GO:0048229 GO:0048232 GO:0048235 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0051321 GO:0051704 GO:0055046 GO:0060255 GO:0065007 GO:0070013 GO:0070192 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:0098813 GO:0140013 GO:1901363 GO:1903046 GO:1903506 GO:1990188 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

474

Amino Acids

54.59

Weight (kDa)

6.1

Isoelectric Point (pI)

39.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	240 - 316	9.7e-09	Winged helix-turn-helix domain in plant reproductive proteins

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07714 ATMG00550
malus_domestica	MD10G1001200.v1.1
rosa_chinensis	RchiOBHm_Chr2g0092391 RchiOBHm_Chr2g0092501 RchiOBHm_Chr2g0092521 RchiOBHm_Chr2g0134011 RchiOBHm_Chr6g0294291
rosa_laevigata	RLG00000016321
rosa_multiflora	Rmu_co8274023.1_g000001 Rmu_sc0002503.1_g000019 Rmu_sc0004296.1_g000006 Rmu_sc0004296.1_g000007 Rmu_sc0004296.1_g000011 Rmu_sc0004296.1_g000012
rosa_roxburghii	Rroxscaffold_2G00110570 Rroxscaffold_2G00149000 Rroxscaffold_2G00149020
rosa_rugosa	Rorug02G0027300
rosa_samantha	Rh2AG071600 Rh2BG071500 Rh2BG073800 Rh2CG072900 Rh2CG075000 Rh2CG350900 Rh2CG351000 Rh2DG070100 Rh2DG072200 Rh2DG390100 Rh6AG355700 Rh6CG369700
rosa_wichuraiana	Rw2G005990 Rw6G030990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	703, 1068
AciI	CCGC	3 cut(s)	274, 277, 709
AclWI	GGATC	1 cut(s)	405
AcsI	RAATTY	2 cut(s)	437, 1285
AcuI	CTGAAG	1 cut(s)	893
AdeI	CACNNNGTG	1 cut(s)	541
AfaI	GTAC	3 cut(s)	172, 582, 1085
AfiI	CCNNNNNNNGG	5 cut(s)	366, 736, 805, 1034, 1099
AflIII	ACRYGT	1 cut(s)	148
AjnI	CCWGG	4 cut(s)	76, 413, 1149, 1412
Alw26I	GTCTC	3 cut(s)	605, 938, 1163
AlwI	GGATC	1 cut(s)	405
AoxI	GGCC	2 cut(s)	778, 1280
ApeKI	GCWGC	5 cut(s)	20, 111, 809, 1187, 1219
ApoI	RAATTY	2 cut(s)	437, 1285
Asp700I	GAANNNNTTC	2 cut(s)	531, 1242
AspLEI	GCGC	1 cut(s)	1224
AspS9I	GGNCC	5 cut(s)	547, 727, 779, 796, 1410
AsuHPI	GGTGA	2 cut(s)	974, 1066
AsuNHI	GCTAGC	2 cut(s)	328, 812
AvaII	GGWCC	4 cut(s)	547, 727, 796, 1410
BaeGI	GKGCMC	1 cut(s)	84
BanII	GRGCYC	1 cut(s)	972
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	258
BbvCI	CCTCAGC	2 cut(s)	287, 333
BbvI	GCAGC	5 cut(s)	7, 123, 821, 1174, 1231
BccI	CCATC	4 cut(s)	189, 667, 922, 1153
BciT130I	CCWGG	4 cut(s)	78, 415, 1151, 1414
BciVI	GTATCC	2 cut(s)	425, 744
BclI	TGATCA	1 cut(s)	756
BcoDI	GTCTC	3 cut(s)	605, 938, 1163
BfaI	CTAG	7 cut(s)	329, 488, 560, 572, 699, 723, 813
BfoI	RGCGCY	1 cut(s)	1225
BfuI	GTATCC	2 cut(s)	425, 744
BisI	GCNGC	6 cut(s)	21, 112, 275, 810, 1188, 1220
BlsI	GCNGC	6 cut(s)	22, 113, 276, 811, 1189, 1221
BmcAI	AGTACT	1 cut(s)	582
Bme1390I	CCNGG	4 cut(s)	78, 415, 1151, 1414
Bme18I	GGWCC	4 cut(s)	547, 727, 796, 1410
BmgT120I	GGNCC	5 cut(s)	547, 727, 779, 796, 1410
BmiI	GGNNCC	2 cut(s)	728, 1295
BmrFI	CCNGG	4 cut(s)	78, 415, 1151, 1414
BmsI	GCATC	1 cut(s)	979
BmtI	GCTAGC	2 cut(s)	332, 816
BpiI	GAAGAC	1 cut(s)	258
BpmI	CTGGAG	1 cut(s)	962
Bpu10I	CCTNAGC	2 cut(s)	287, 333
BsaAI	YACGTR	1 cut(s)	9
BsaBI	GATNNNNATC	1 cut(s)	755
BsaJI	CCNNGG	5 cut(s)	76, 77, 1150, 1371, 1413
Bsc4I	CCNNNNNNNGG	5 cut(s)	366, 736, 805, 1034, 1099
Bse1I	ACTGG	4 cut(s)	231, 771, 846, 945
Bse3DI	GCAATG	3 cut(s)	318, 693, 910
Bse8I	GATNNNNATC	1 cut(s)	755
BseBI	CCWGG	4 cut(s)	78, 415, 1151, 1414
BseDI	CCNNGG	5 cut(s)	76, 77, 1150, 1371, 1413
BseGI	GGATG	1 cut(s)	358
BseJI	GATNNNNATC	1 cut(s)	755
BseLI	CCNNNNNNNGG	5 cut(s)	366, 736, 805, 1034, 1099
BseMI	GCAATG	3 cut(s)	318, 693, 910
BseMII	CTCAG	7 cut(s)	278, 324, 616, 814, 957, 1221, 1312
BseNI	ACTGG	4 cut(s)	231, 771, 846, 945
BseRI	GAGGAG	1 cut(s)	752
BseSI	GKGCMC	1 cut(s)	84
BseXI	GCAGC	5 cut(s)	7, 123, 821, 1174, 1231
BseYI	CCCAGC	1 cut(s)	1385
BsgI	GTGCAG	1 cut(s)	34
BshFI	GGCC	2 cut(s)	780, 1282
BslFI	GGGAC	2 cut(s)	740, 1353
BslI	CCNNNNNNNGG	5 cut(s)	366, 736, 805, 1034, 1099
BsmAI	GTCTC	3 cut(s)	605, 938, 1163
BsmFI	GGGAC	2 cut(s)	740, 1353
BsnI	GGCC	2 cut(s)	780, 1282
Bsp1286I	GDGCHC	2 cut(s)	84, 972
Bsp143I	GATC	4 cut(s)	376, 410, 756, 915
Bsp19I	CCATGG	1 cut(s)	1371
BspACI	CCGC	3 cut(s)	274, 277, 709
BspANI	GGCC	2 cut(s)	780, 1282
BspCNI	CTCAG	7 cut(s)	279, 325, 615, 813, 958, 1222, 1311
BspLI	GGNNCC	2 cut(s)	728, 1295
BspOI	GCTAGC	2 cut(s)	332, 816
BspPI	GGATC	1 cut(s)	405
BsrDI	GCAATG	3 cut(s)	318, 693, 910
BsrI	ACTGG	4 cut(s)	231, 771, 846, 945
BssECI	CCNNGG	5 cut(s)	76, 77, 1150, 1371, 1413
BssMI	GATC	4 cut(s)	376, 410, 756, 915
BssNAI	GTATAC	1 cut(s)	704
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	1 cut(s)	1371
Bst1107I	GTATAC	1 cut(s)	704
Bst2BI	CACGAG	1 cut(s)	83
Bst2UI	CCWGG	4 cut(s)	78, 415, 1151, 1414
Bst4CI	ACNGT	5 cut(s)	131, 986, 1012, 1293, 1309
Bst6I	CTCTTC	3 cut(s)	61, 954, 1387
BstBAI	YACGTR	1 cut(s)	9
BstC8I	GCNNGC	5 cut(s)	330, 386, 639, 814, 901
BstDEI	CTNAG	7 cut(s)	287, 333, 602, 800, 966, 1230, 1298
BstDSI	CCRYGG	1 cut(s)	1371
BstENI	CCTNNNNNAGG	2 cut(s)	803, 1097
BstF5I	GGATG	1 cut(s)	358
BstH2I	RGCGCY	1 cut(s)	1225
BstHHI	GCGC	1 cut(s)	1224
BstKTI	GATC	4 cut(s)	379, 413, 759, 918
BstMAI	GTCTC	3 cut(s)	605, 938, 1163
BstMBI	GATC	4 cut(s)	376, 410, 756, 915
BstMWI	GCNNNNNNNGC	4 cut(s)	108, 283, 329, 683
BstNI	CCWGG	4 cut(s)	78, 415, 1151, 1414
BstNSI	RCATGY	2 cut(s)	152, 1385
BstSCI	CCNGG	4 cut(s)	76, 413, 1149, 1412
BstSLI	GKGCMC	1 cut(s)	84
BstV1I	GCAGC	5 cut(s)	7, 123, 821, 1174, 1231
BstV2I	GAAGAC	1 cut(s)	258
BstX2I	RGATCY	1 cut(s)	410
BstYI	RGATCY	1 cut(s)	410
BstZ17I	GTATAC	1 cut(s)	704
BsuI	GTATCC	2 cut(s)	425, 744
BsuRI	GGCC	2 cut(s)	780, 1282
BtgI	CCRYGG	1 cut(s)	1371
BtsCI	GGATG	1 cut(s)	358
BtsI	GCAGTG	2 cut(s)	22, 1045
BtsIMutI	CAGTG	4 cut(s)	22, 808, 1045, 1306
Cac8I	GCNNGC	5 cut(s)	330, 386, 639, 814, 901
CfoI	GCGC	1 cut(s)	1224
Cfr13I	GGNCC	5 cut(s)	547, 727, 779, 796, 1410
Csp6I	GTAC	3 cut(s)	171, 581, 1084
CviAII	CATG	7 cut(s)	149, 156, 1075, 1113, 1247, 1372, 1382
CviQI	GTAC	3 cut(s)	171, 581, 1084
DdeI	CTNAG	7 cut(s)	287, 333, 602, 800, 966, 1230, 1298
DpnI	GATC	4 cut(s)	378, 412, 758, 917
DpnII	GATC	4 cut(s)	376, 410, 756, 915
DraIII	CACNNNGTG	1 cut(s)	541
Eam1104I	CTCTTC	3 cut(s)	61, 954, 1387
EarI	CTCTTC	3 cut(s)	61, 954, 1387
EciI	GGCGGA	1 cut(s)	292
Eco130I	CCWWGG	1 cut(s)	1371
Eco24I	GRGCYC	1 cut(s)	972
Eco32I	GATATC	1 cut(s)	73
Eco47I	GGWCC	4 cut(s)	547, 727, 796, 1410
Eco57I	CTGAAG	1 cut(s)	893
EcoNI	CCTNNNNNAGG	2 cut(s)	803, 1097
EcoO109I	RGGNCCY	2 cut(s)	779, 796
EcoRII	CCWGG	4 cut(s)	76, 413, 1149, 1412
EcoRV	GATATC	1 cut(s)	73
EcoT14I	CCWWGG	1 cut(s)	1371
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	972
ErhI	CCWWGG	1 cut(s)	1371
FaeI	CATG	7 cut(s)	152, 159, 1078, 1116, 1250, 1375, 1385
FaqI	GGGAC	2 cut(s)	740, 1353
FatI	CATG	7 cut(s)	148, 155, 1074, 1112, 1246, 1371, 1381
FauI	CCCGC	1 cut(s)	716
FbaI	TGATCA	1 cut(s)	756
FblI	GTMKAC	2 cut(s)	703, 1068
Fnu4HI	GCNGC	6 cut(s)	21, 112, 275, 810, 1188, 1220
FokI	GGATG	1 cut(s)	365
FriOI	GRGCYC	1 cut(s)	972
Fsp4HI	GCNGC	6 cut(s)	21, 112, 275, 810, 1188, 1220
FspBI	CTAG	7 cut(s)	329, 488, 560, 572, 699, 723, 813
GlaI	GCGC	1 cut(s)	1223
GluI	GCNGC	6 cut(s)	21, 112, 275, 810, 1188, 1220
GsaI	CCCAGC	1 cut(s)	1389
GsuI	CTGGAG	1 cut(s)	962
HaeII	RGCGCY	1 cut(s)	1225
HaeIII	GGCC	2 cut(s)	780, 1282
HhaI	GCGC	1 cut(s)	1224
Hin1II	CATG	7 cut(s)	152, 159, 1078, 1116, 1250, 1375, 1385
Hin6I	GCGC	1 cut(s)	1222
HinP1I	GCGC	1 cut(s)	1222
HincII	GTYRAC	2 cut(s)	118, 651
HindII	GTYRAC	2 cut(s)	118, 651
HinfI	GANTC	6 cut(s)	314, 826, 868, 910, 946, 1192
HphI	GGTGA	2 cut(s)	974, 1066
Hpy166II	GTNNAC	6 cut(s)	118, 137, 651, 704, 982, 1069
Hpy188I	TCNGA	4 cut(s)	820, 873, 915, 1158
Hpy188III	TCNNGA	3 cut(s)	572, 619, 1313
Hpy8I	GTNNAC	6 cut(s)	118, 137, 651, 704, 982, 1069
HpyAV	CCTTC	6 cut(s)	29, 618, 783, 1093, 1228, 1232
HpyCH4III	ACNGT	5 cut(s)	131, 986, 1012, 1293, 1309
HpyCH4IV	ACGT	2 cut(s)	8, 344
HpyF10VI	GCNNNNNNNGC	4 cut(s)	108, 283, 329, 683
HpyF3I	CTNAG	7 cut(s)	287, 333, 602, 800, 966, 1230, 1298
HpySE526I	ACGT	2 cut(s)	8, 344
Hsp92II	CATG	7 cut(s)	152, 159, 1078, 1116, 1250, 1375, 1385
HspAI	GCGC	1 cut(s)	1222
Ksp22I	TGATCA	1 cut(s)	756
Kzo9I	GATC	4 cut(s)	376, 410, 756, 915
LmnI	GCTCC	1 cut(s)	821
Lsp1109I	GCAGC	5 cut(s)	7, 123, 821, 1174, 1231
LweI	GCATC	1 cut(s)	979
MaeI	CTAG	7 cut(s)	329, 488, 560, 572, 699, 723, 813
MaeII	ACGT	2 cut(s)	8, 344
MaeIII	GTNAC	5 cut(s)	202, 340, 500, 590, 629
MalI	GATC	4 cut(s)	378, 412, 758, 917
MboI	GATC	4 cut(s)	376, 410, 756, 915
MflI	RGATCY	1 cut(s)	410
MhlI	GDGCHC	2 cut(s)	84, 972
MluCI	AATT	6 cut(s)	51, 437, 852, 891, 1087, 1285
MlyI	GAGTC	2 cut(s)	835, 940
MmeI	TCCRAC	4 cut(s)	215, 225, 327, 698
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	531, 1242
MseI	TTAA	2 cut(s)	626, 1079
MslI	CAYNNNNRTG	1 cut(s)	987
MspR9I	CCNGG	4 cut(s)	78, 415, 1151, 1414
MvaI	CCWGG	4 cut(s)	78, 415, 1151, 1414
MwoI	GCNNNNNNNGC	4 cut(s)	108, 283, 329, 683
NcoI	CCATGG	1 cut(s)	1371
NdeII	GATC	4 cut(s)	376, 410, 756, 915
NheI	GCTAGC	2 cut(s)	328, 812
NlaIII	CATG	7 cut(s)	152, 159, 1078, 1116, 1250, 1375, 1385
NlaIV	GGNNCC	2 cut(s)	728, 1295
NmuCI	GTSAC	1 cut(s)	629
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	152, 1385
PasI	CCCWGGG	1 cut(s)	77
PciI	ACATGT	1 cut(s)	148
PdmI	GAANNNNTTC	2 cut(s)	531, 1242
PfeI	GAWTC	4 cut(s)	314, 868, 910, 1192
PkrI	GCNGC	6 cut(s)	22, 113, 276, 811, 1189, 1221
PleI	GAGTC	2 cut(s)	834, 940
PpsI	GAGTC	2 cut(s)	834, 940
Ppu21I	YACGTR	1 cut(s)	9
PpuMI	RGGWCCY	1 cut(s)	796
PscI	ACATGT	1 cut(s)	148
Psp5II	RGGWCCY	1 cut(s)	796
Psp6I	CCWGG	4 cut(s)	76, 413, 1149, 1412
PspFI	CCCAGC	1 cut(s)	1385
PspGI	CCWGG	4 cut(s)	76, 413, 1149, 1412
PspN4I	GGNNCC	2 cut(s)	728, 1295
PspPI	GGNCC	5 cut(s)	547, 727, 779, 796, 1410
PspPPI	RGGWCCY	1 cut(s)	796
PsuI	RGATCY	1 cut(s)	410
RsaI	GTAC	3 cut(s)	172, 582, 1085
RsaNI	GTAC	3 cut(s)	171, 581, 1084
RseI	CAYNNNNRTG	1 cut(s)	987
SaqAI	TTAA	2 cut(s)	626, 1079
SatI	GCNGC	6 cut(s)	21, 112, 275, 810, 1188, 1220
Sau3AI	GATC	4 cut(s)	376, 410, 756, 915
Sau96I	GGNCC	5 cut(s)	547, 727, 779, 796, 1410
ScaI	AGTACT	1 cut(s)	582
SchI	GAGTC	2 cut(s)	835, 940
ScrFI	CCNGG	4 cut(s)	78, 415, 1151, 1414
SduI	GDGCHC	2 cut(s)	84, 972
SfaNI	GCATC	1 cut(s)	979
SinI	GGWCC	4 cut(s)	547, 727, 796, 1410
SmiMI	CAYNNNNRTG	1 cut(s)	987
Sse9I	AATT	6 cut(s)	51, 437, 852, 891, 1087, 1285
SsiI	CCGC	3 cut(s)	274, 277, 709
SspI	AATATT	1 cut(s)	1046
SspMI	CTAG	7 cut(s)	329, 488, 560, 572, 699, 723, 813
StyD4I	CCNGG	4 cut(s)	76, 413, 1149, 1412
StyI	CCWWGG	1 cut(s)	1371
TaaI	ACNGT	5 cut(s)	131, 986, 1012, 1293, 1309
TaiI	ACGT	2 cut(s)	11, 347
TaqI	TCGA	1 cut(s)	420
TasI	AATT	6 cut(s)	51, 437, 852, 891, 1087, 1285
TatI	WGTACW	3 cut(s)	170, 580, 1083
TauI	GCSGC	1 cut(s)	277
TfiI	GAWTC	4 cut(s)	314, 868, 910, 1192
Tru1I	TTAA	2 cut(s)	626, 1079
Tru9I	TTAA	2 cut(s)	626, 1079
TscAI	CASTG	4 cut(s)	22, 808, 1045, 1306
TseFI	GTSAC	1 cut(s)	629
TseI	GCWGC	5 cut(s)	20, 111, 809, 1187, 1219
Tsp45I	GTSAC	1 cut(s)	629
TspDTI	ATGAA	7 cut(s)	48, 480, 554, 878, 1020, 1112, 1235
TspGWI	ACGGA	2 cut(s)	420, 763
TspRI	CASTG	4 cut(s)	22, 808, 1045, 1306
VpaK11BI	GGWCC	4 cut(s)	547, 727, 796, 1410
XagI	CCTNNNNNAGG	2 cut(s)	803, 1097
XapI	RAATTY	2 cut(s)	437, 1285
XbaI	TCTAGA	1 cut(s)	571
XceI	RCATGY	2 cut(s)	152, 1385
XcmI	CCANNNNNNNNNTGG	1 cut(s)	670
XmiI	GTMKAC	2 cut(s)	703, 1068
XmnI	GAANNNNTTC	2 cut(s)	531, 1242
XspI	CTAG	7 cut(s)	329, 488, 560, 572, 699, 723, 813
ZrmI	AGTACT	1 cut(s)	582
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.