Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0001945

Physical Location & Seq

Genomic Coordinates Forward (+)

47528479 .. 47561074

Gene Structure 32596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG350400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGAGAGGCCGAGATGCGTTCTGTGATTGGATGGGTTCTGTGAGAGGGAGATCGAACAGAGGGAGACCGAGCAGAGGAGATAGACCGAGCAGGGAGACCGACCGGAGACCGAGCGGAGGGAGATCGACCGGAGACCGAGTAGAGATCGAGCGGAGATCGAGACCAGAGACCGAGAAGAGGAGAGCGGAGATCGAGCAGAGGAGACCGGAGATCGAGACCGGAGACCGGAGAACTAGCAGAGACCGAGCAGAGGAGAGCGGAGATCGAGCAGAGGAGAGCGGAGACCGAGCAGAGGAGAGCGGAGATCGAGCAGAGGAGAGCGGAGACCGAGCAGAAGAGAGCGGAGATCGAGACCGGAGACCCAGCAGAGACCGAGCAGAGGAGATCGACCGGATGGAGATGGGAGATCGACCGATGGAGATGGGAGATCGACCGGAGACCGATGGGAGATCGACAGGAGACCGATGGGAGATCGAGCAGGGATTGGATGCGTTCTGTGATGGAAGCTCCCAAGGGCGCGCCGTCAGGGTTGAAGCGAGTAGTAATCGTAGTGTTCGTGTCGGAAATAAGGGAGTGCAGTCTCCAGGGCTGAAGCCGCCGCCGTCGATGCCTACGGTTCTGGTGATTGACAATGGATGCTCGATTTGGGACATTTTGAGGGACTTTGCTCTGGAAGAAGAAAAGGAAATGGGGAAGAGAAGGGAACAAGTGGAAGTTATGCAAATCCAGTTCGTTGCTCTAGCTCCTGGTTCTAGCACCGAACTGGATTTGCATAACTTAGAGGAGCCATGGCCGAAGACGAACAGGGAAGCAATAAAGCTAAAGCTAATCTTCTGCTTTCTCCTGCCTGCTCTCAGCATTGAGGCCTATGACCCTCTTGATCCCACAGGAAACATCACAATCAGATGGGACATCTTAAGTTGGACGGAGGATGGTTATGTGGCTATTGTCACTATAAGAAATTATCAGATGTACCGACACATCGAAGCACCAGGATGGAGGTTAGGTTGGTCCTGGGCGAGAGGTGAGGTACTTTGGTCTATGCTGGGCGCCGAAACGACCGAGAGGGGAGACTGCTCCAGATTTGGAGGAGGAGTAGATGGCCCTCCGCATTGCTGTGATAGCAGTCCGAAGGTGGTGGACTTGCTTCCTGGTGTGCCATACAACCAGCGGATCTCTCAGTGCTGCAGAGGGGGAAACTTGGGTTCAATGGTCCAGGACCAAGCAGCCAGTGCGAGCATGTTCCAGATGACGGTGGCTGCTGCTGGTACCACTAAGAAGACCGTCAGGCGACCGAAGAATTTCACACTGGAAGCGCCCGGACCTGGATATACTTGTGGTCCAGCACGCATTGTGGATCCCACAAGATATCCCTCTCCTGATAGGAGGAGACACACTCAAGCTCTTGTGAGCTGGAATGTGGTCTGCACGTATTCACAGTTCCTTGCTTCAGCAACACCTACTTGTTGCGTGTCCCTCTCCTCTTTTTACAGTAAGATGTTGGTGAGCTGCCGTACCTGTGCTTGTGGCTGCAAGAGCAACCCCGGCGGCTGTGCAGGGCCAAATTCTCCAGATTTATCTCCAGCTCCTCGCGTCCAGTGTACGAGCCATATGTGTCCAGTGCGAGTCCACTGGCACGTTAAGCTCAACTACAAGGAGTATTGGAGGGTTAAAATTAGCGTAACCAATTTCAATTACAAGATGAACTATACTCAGTGGAATCTGGTTGTGCAACATCCCAACTTCAACAACATGACAACAAGTTATAGCTTCAATTCCCATTCATTAGGTCCCTATGGTGATATAAATGATACAACTATGTTTTGGGGACTTGAGTATTTCAACGACATGCTCTTGGAAGCTGGTCTTGAAGGAAACGTGCGGTCGGATATTCTTTTTGGGAAGAGCAAATCCAGTTTTACATTTGCAAATGGATGGGCTTTCCCTCGAAGGATTTATTTTAATGGCGAGGAATGCGTTATGCCCCCTGTTGATGTCTACCCAAGGCTGCCAAGCAGTAGTCGGAAACCAACCAGTTGTGTACTTGATGCAGCCGTCACCTGCATTTTGACATTATTATGTTTAGCTATGAGTGTCTGGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009505 GO:0009628 GO:0009651 GO:0009664 GO:0009825 GO:0009832 GO:0009897 GO:0009930 GO:0009986 GO:0009987 GO:0010215 GO:0016020 GO:0016043 GO:0016049 GO:0022607 GO:0030198 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0040007 GO:0042546 GO:0043062 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0050896 GO:0070726 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071840 GO:0071944 GO:0098552

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

701

Amino Acids

78.68

Weight (kDa)

6.78

Isoelectric Point (pI)

60.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	313 - 479	3e-62	COBRA-like protein
COB_C	PF25079	488 - 513	2.5e-06	COBRA family C-terminal domain
COB_C	PF25079	529 - 668	3e-43	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02320 AT5G15810
fragaria_vesca	FvH4_6g46450 FvH4_6g46450 FvH4_6g46450
malus_domestica	MD09G1073500.v1.1 MD17G1065000.v1.1
prunus_persica	Prupe.3G249800_v2.0.a1 Prupe.3G249800_v2.0.a1
pyrus_communis	pycom09g00090 pycom17g06500
rosa_chinensis	RchiOBHm_Chr2g0130081 RchiOBHm_Chr2g0165001
rosa_laevigata	RLG00000008503 RLG00000021506
rosa_multiflora	Rmu_co8255059.1_g000001 Rmu_sc0001097.1_g000019 Rmu_sc0002970.1_g000011 Rmu_sc0022378.1_g000001 Rmu_sc0026009.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025420 Rroxscaffold_1G00038210 Rroxscaffold_1G00074000 Rroxscaffold_2G00083080 Rroxscaffold_5G00359260 Rroxscaffold_7G00169970 Rroxscaffold_7G00192270 Rroxscaffold_7G00205690
rosa_rugosa	Rorug02G0291000 Rorug02G0512100
rosa_samantha	Rh1AG215300 Rh1CG199800 Rh1DG211500 Rh2AG509800 Rh2AG580200 Rh2BG350400 Rh2BG572900 Rh2BG591500 Rh2CG495000 Rh2CG562000 Rh2DG601600 Rh4CG060300
rosa_wichuraiana	Rw0G021070 Rw2G027680 Rw2G048160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2069
Acc36I	ACCTGC	1 cut(s)	2069
Acc65I	GGTACC	1 cut(s)	1268
AccB1I	GGYRCC	2 cut(s)	1049, 1268
AccBSI	CCGCTC	8 cut(s)	114, 151, 185, 258, 279, 300, 321, 342
AccI	GTMKAC	1 cut(s)	1998
AccII	CGCG	2 cut(s)	519, 1593
AclWI	GGATC	4 cut(s)	875, 1181, 1352, 1365
AcoI	YGGCCR	1 cut(s)	791
AcsI	RAATTY	2 cut(s)	1300, 1564
AcuI	CTGAAG	2 cut(s)	611, 1434
AcyI	GRCGYC	1 cut(s)	1050
AfaI	GTAC	6 cut(s)	974, 1032, 1270, 1516, 1603, 2043
AfiI	CCNNNNNNNGG	9 cut(s)	74, 116, 177, 225, 250, 292, 379, 1252, 1325
AflII	CTTAAG	1 cut(s)	916
AgsI	TTSAA	7 cut(s)	533, 1209, 1693, 1747, 1774, 1843, 1871
AjnI	CCWGG	7 cut(s)	583, 745, 991, 1013, 1150, 1215, 1324
AlwI	GGATC	4 cut(s)	875, 1181, 1352, 1365
AoxI	GGCC	5 cut(s)	7, 791, 864, 1102, 1559
ApeKI	GCWGC	8 cut(s)	1185, 1226, 1259, 1262, 1509, 1530, 2008, 2051
ApoI	RAATTY	2 cut(s)	1300, 1564
AscI	GGCGCGCC	1 cut(s)	517
Asp700I	GAANNNNTTC	1 cut(s)	1301
Asp718I	GGTACC	1 cut(s)	1268
AspLEI	GCGC	4 cut(s)	519, 521, 1052, 1318
AspS9I	GGNCC	8 cut(s)	1011, 1103, 1213, 1219, 1322, 1340, 1559, 1790
AsuC2I	CCSGG	2 cut(s)	1320, 1545
AsuHPI	GGTGA	5 cut(s)	634, 1037, 1516, 1811, 2050
AvaII	GGWCC	6 cut(s)	1011, 1213, 1219, 1322, 1340, 1790
BaeI	ACNNNNGTAYC	2 cut(s)	1022, 1055
BamHI	GGATCC	1 cut(s)	1357
BanI	GGYRCC	2 cut(s)	1049, 1268
BbsI	GAAGAC	2 cut(s)	803, 1286
BbvI	GCAGC	8 cut(s)	1172, 1238, 1246, 1249, 1496, 1517, 1995, 2063
BceAI	ACGGC	4 cut(s)	506, 586, 1497, 2039
BciT130I	CCWGG	7 cut(s)	585, 747, 993, 1015, 1152, 1217, 1326
BcnI	CCSGG	2 cut(s)	1320, 1545
BfaI	CTAG	3 cut(s)	234, 740, 753
BfmI	CTRYAG	1 cut(s)	1186
BfoI	RGCGCY	2 cut(s)	1053, 1319
BfrI	CTTAAG	1 cut(s)	916
BfuAI	ACCTGC	1 cut(s)	2069
Bme1390I	CCNGG	9 cut(s)	585, 747, 993, 1015, 1152, 1217, 1320, 1326, 1545
Bme18I	GGWCC	6 cut(s)	1011, 1213, 1219, 1322, 1340, 1790
BmgT120I	GGNCC	8 cut(s)	1011, 1103, 1213, 1219, 1322, 1340, 1559, 1790
BmiI	GGNNCC	5 cut(s)	786, 1051, 1270, 1359, 1792
BmrFI	CCNGG	9 cut(s)	585, 747, 993, 1015, 1152, 1217, 1320, 1326, 1545
BmsI	GCATC	5 cut(s)	4, 478, 597, 626, 2038
BpiI	GAAGAC	2 cut(s)	803, 1286
BplI	GAGNNNNNCTC	2 cut(s)	1381, 1413
BpmI	CTGGAG	4 cut(s)	567, 1063, 1554, 1566
BpuEI	CTTGAG	2 cut(s)	1383, 1853
BpuMI	CCSGG	2 cut(s)	1320, 1545
BsaAI	YACGTR	1 cut(s)	1431
BsaHI	GRCGYC	1 cut(s)	1050
BsaJI	CCNNGG	6 cut(s)	511, 584, 788, 1014, 1543, 2003
BsaWI	WCCGGW	8 cut(s)	102, 128, 205, 218, 225, 354, 390, 433
BsaXI	ACNNNNNCTCC	6 cut(s)	123, 153, 991, 1021, 1080, 1110
Bsc4I	CCNNNNNNNGG	9 cut(s)	74, 116, 177, 225, 250, 292, 379, 1252, 1325
Bse1I	ACTGG	9 cut(s)	727, 768, 1230, 1314, 1597, 1619, 1637, 1914, 2034
Bse3DI	GCAATG	1 cut(s)	1111
BseBI	CCWGG	7 cut(s)	585, 747, 993, 1015, 1152, 1217, 1326
BseDI	CCNNGG	6 cut(s)	511, 584, 788, 1014, 1543, 2003
BseGI	GGATG	8 cut(s)	36, 399, 493, 641, 937, 1001, 1735, 1940
BseLI	CCNNNNNNNGG	9 cut(s)	74, 116, 177, 225, 250, 292, 379, 1252, 1325
BseMI	GCAATG	1 cut(s)	1111
BseMII	CTCAG	3 cut(s)	868, 1193, 1727
BseNI	ACTGG	9 cut(s)	727, 768, 1230, 1314, 1597, 1619, 1637, 1914, 2034
BsePI	GCGCGC	1 cut(s)	517
BseXI	GCAGC	8 cut(s)	1172, 1238, 1246, 1249, 1496, 1517, 1995, 2063
BseYI	CCCAGC	2 cut(s)	362, 1045
BsgI	GTGCAG	3 cut(s)	596, 1411, 1575
Bsh1236I	CGCG	2 cut(s)	519, 1593
Bsh1285I	CGRYCG	8 cut(s)	103, 129, 391, 413, 434, 1062, 1295, 1886
BshFI	GGCC	5 cut(s)	9, 793, 866, 1104, 1561
BshNI	GGYRCC	2 cut(s)	1049, 1268
BsiEI	CGRYCG	8 cut(s)	103, 129, 391, 413, 434, 1062, 1295, 1886
BslFI	GGGAC	6 cut(s)	662, 674, 923, 1459, 1776, 1842
BslI	CCNNNNNNNGG	9 cut(s)	74, 116, 177, 225, 250, 292, 379, 1252, 1325
BsmFI	GGGAC	6 cut(s)	662, 674, 923, 1459, 1776, 1842
BsmI	GAATGC	1 cut(s)	1979
BsnI	GGCC	5 cut(s)	9, 793, 866, 1104, 1561
Bsp19I	CCATGG	1 cut(s)	788
BspANI	GGCC	5 cut(s)	9, 793, 866, 1104, 1561
BspCNI	CTCAG	3 cut(s)	867, 1192, 1726
BspFNI	CGCG	2 cut(s)	519, 1593
BspLI	GGNNCC	5 cut(s)	786, 1051, 1270, 1359, 1792
BspMAI	CTGCAG	1 cut(s)	1190
BspMI	ACCTGC	1 cut(s)	2069
BspPI	GGATC	4 cut(s)	875, 1181, 1352, 1365
BspQI	GCTCTTC	1 cut(s)	1898
BspT107I	GGYRCC	2 cut(s)	1049, 1268
BspTI	CTTAAG	1 cut(s)	916
BsrBI	CCGCTC	8 cut(s)	114, 151, 185, 258, 279, 300, 321, 342
BsrDI	GCAATG	1 cut(s)	1111
BsrI	ACTGG	9 cut(s)	727, 768, 1230, 1314, 1597, 1619, 1637, 1914, 2034
BssECI	CCNNGG	6 cut(s)	511, 584, 788, 1014, 1543, 2003
BssHII	GCGCGC	1 cut(s)	517
BssNI	GRCGYC	1 cut(s)	1050
BssT1I	CCWWGG	3 cut(s)	511, 788, 2003
Bst2UI	CCWGG	7 cut(s)	585, 747, 993, 1015, 1152, 1217, 1326
Bst4CI	ACNGT	5 cut(s)	616, 1255, 1285, 1440, 1493
Bst6I	CTCTTC	4 cut(s)	170, 330, 689, 1898
BstACI	GRCGYC	1 cut(s)	1050
BstAFI	CTTAAG	1 cut(s)	916
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstBAI	YACGTR	1 cut(s)	1431
BstC8I	GCNNGC	4 cut(s)	519, 849, 1237, 1348
BstDEI	CTNAG	5 cut(s)	778, 854, 1179, 1275, 1713
BstDSI	CCRYGG	1 cut(s)	788
BstF5I	GGATG	8 cut(s)	36, 399, 493, 641, 937, 1001, 1735, 1940
BstFNI	CGCG	2 cut(s)	519, 1593
BstH2I	RGCGCY	2 cut(s)	1053, 1319
BstHHI	GCGC	4 cut(s)	519, 521, 1052, 1318
BstMCI	CGRYCG	8 cut(s)	103, 129, 391, 413, 434, 1062, 1295, 1886
BstMWI	GCNNNNNNNGC	8 cut(s)	595, 607, 1122, 1232, 1536, 1545, 1642, 1974
BstNI	CCWGG	7 cut(s)	585, 747, 993, 1015, 1152, 1217, 1326
BstNSI	RCATGY	2 cut(s)	1243, 1852
BstSCI	CCNGG	9 cut(s)	583, 745, 991, 1013, 1150, 1215, 1318, 1324, 1543
BstSFI	CTRYAG	1 cut(s)	1186
BstUI	CGCG	2 cut(s)	519, 1593
BstV1I	GCAGC	8 cut(s)	1172, 1238, 1246, 1249, 1496, 1517, 1995, 2063
BstV2I	GAAGAC	2 cut(s)	803, 1286
BstX2I	RGATCY	2 cut(s)	1173, 1357
BstYI	RGATCY	2 cut(s)	1173, 1357
BsuRI	GGCC	5 cut(s)	9, 793, 866, 1104, 1561
BtgI	CCRYGG	1 cut(s)	788
BtsCI	GGATG	8 cut(s)	36, 399, 493, 641, 937, 1001, 1735, 1940
BtsIMutI	CAGTG	7 cut(s)	1187, 1237, 1307, 1604, 1626, 1630, 1721
BveI	ACCTGC	1 cut(s)	2069
Cac8I	GCNNGC	4 cut(s)	519, 849, 1237, 1348
CfoI	GCGC	4 cut(s)	519, 521, 1052, 1318
Cfr13I	GGNCC	8 cut(s)	1011, 1103, 1213, 1219, 1322, 1340, 1559, 1790
CseI	GACGC	1 cut(s)	1582
Csp6I	GTAC	6 cut(s)	973, 1031, 1269, 1515, 1602, 2042
CviAII	CATG	4 cut(s)	789, 1240, 1753, 1849
CviQI	GTAC	6 cut(s)	973, 1031, 1269, 1515, 1602, 2042
DdeI	CTNAG	5 cut(s)	778, 854, 1179, 1275, 1713
DinI	GGCGCC	1 cut(s)	1051
EaeI	YGGCCR	1 cut(s)	791
Eam1104I	CTCTTC	4 cut(s)	170, 330, 689, 1898
EarI	CTCTTC	4 cut(s)	170, 330, 689, 1898
Eco130I	CCWWGG	3 cut(s)	511, 788, 2003
Eco147I	AGGCCT	1 cut(s)	866
Eco32I	GATATC	1 cut(s)	1370
Eco47I	GGWCC	6 cut(s)	1011, 1213, 1219, 1322, 1340, 1790
Eco57I	CTGAAG	2 cut(s)	611, 1434
EcoO109I	RGGNCCY	1 cut(s)	1790
EcoRII	CCWGG	7 cut(s)	583, 745, 991, 1013, 1150, 1215, 1324
EcoRV	GATATC	1 cut(s)	1370
EcoT14I	CCWWGG	3 cut(s)	511, 788, 2003
EgeI	GGCGCC	1 cut(s)	1051
EheI	GGCGCC	1 cut(s)	1051
ErhI	CCWWGG	3 cut(s)	511, 788, 2003
FaeI	CATG	4 cut(s)	792, 1243, 1756, 1852
FalI	AAGNNNNNCTT	4 cut(s)	815, 847, 1851, 1883
FaqI	GGGAC	6 cut(s)	662, 674, 923, 1459, 1776, 1842
FatI	CATG	4 cut(s)	788, 1239, 1752, 1848
FauNDI	CATATG	1 cut(s)	1611
FblI	GTMKAC	1 cut(s)	1998
FokI	GGATG	8 cut(s)	43, 406, 500, 648, 944, 1008, 1722, 1947
FspBI	CTAG	3 cut(s)	234, 740, 753
GlaI	GCGC	4 cut(s)	518, 520, 1051, 1317
GsaI	CCCAGC	2 cut(s)	366, 1049
GsuI	CTGGAG	4 cut(s)	567, 1063, 1554, 1566
HaeII	RGCGCY	2 cut(s)	1053, 1319
HaeIII	GGCC	5 cut(s)	9, 793, 866, 1104, 1561
HgaI	GACGC	1 cut(s)	1582
HhaI	GCGC	4 cut(s)	519, 521, 1052, 1318
Hin1I	GRCGYC	1 cut(s)	1050
Hin1II	CATG	4 cut(s)	792, 1243, 1756, 1852
Hin6I	GCGC	4 cut(s)	517, 519, 1050, 1316
HinP1I	GCGC	4 cut(s)	517, 519, 1050, 1316
HinfI	GANTC	2 cut(s)	1626, 1720
HphI	GGTGA	5 cut(s)	634, 1037, 1516, 1811, 2050
Hpy166II	GTNNAC	5 cut(s)	1141, 1602, 1630, 1999, 2042
Hpy188I	TCNGA	6 cut(s)	563, 905, 969, 1131, 1888, 2025
Hpy8I	GTNNAC	5 cut(s)	1141, 1602, 1630, 1999, 2042
Hpy99I	CGWCG	1 cut(s)	607
HpyAV	CCTTC	4 cut(s)	693, 1126, 1865, 1944
HpyCH4III	ACNGT	5 cut(s)	616, 1255, 1285, 1440, 1493
HpyCH4IV	ACGT	3 cut(s)	1430, 1638, 1878
HpyF10VI	GCNNNNNNNGC	8 cut(s)	595, 607, 1122, 1232, 1536, 1545, 1642, 1974
HpyF3I	CTNAG	5 cut(s)	778, 854, 1179, 1275, 1713
HpySE526I	ACGT	3 cut(s)	1430, 1638, 1878
Hsp92I	GRCGYC	1 cut(s)	1050
Hsp92II	CATG	4 cut(s)	792, 1243, 1756, 1852
HspAI	GCGC	4 cut(s)	517, 519, 1050, 1316
KasI	GGCGCC	1 cut(s)	1049
KpnI	GGTACC	1 cut(s)	1272
LguI	GCTCTTC	1 cut(s)	1898
LmnI	GCTCC	5 cut(s)	512, 748, 784, 1082, 1591
Lsp1109I	GCAGC	8 cut(s)	1172, 1238, 1246, 1249, 1496, 1517, 1995, 2063
LweI	GCATC	5 cut(s)	4, 478, 597, 626, 2038
MaeI	CTAG	3 cut(s)	234, 740, 753
MaeII	ACGT	3 cut(s)	1430, 1638, 1878
MaeIII	GTNAC	3 cut(s)	949, 1681, 2056
MbiI	CCGCTC	8 cut(s)	114, 151, 185, 258, 279, 300, 321, 342
MflI	RGATCY	2 cut(s)	1173, 1357
MluCI	AATT	7 cut(s)	961, 1300, 1564, 1674, 1687, 1693, 1774
Mly113I	GGCGCC	1 cut(s)	1050
MlyI	GAGTC	1 cut(s)	1635
MmeI	TCCRAC	4 cut(s)	541, 902, 1866, 2003
MroXI	GAANNNNTTC	1 cut(s)	1301
MseI	TTAA	4 cut(s)	917, 1641, 1671, 1962
MslI	CAYNNNNRTG	3 cut(s)	994, 1116, 2077
MspA1I	CMGCKG	1 cut(s)	1171
MspCI	CTTAAG	1 cut(s)	916
MspR9I	CCNGG	9 cut(s)	585, 747, 993, 1015, 1152, 1217, 1320, 1326, 1545
Mva1269I	GAATGC	1 cut(s)	1979
MvaI	CCWGG	7 cut(s)	585, 747, 993, 1015, 1152, 1217, 1326
MvnI	CGCG	2 cut(s)	519, 1593
MwoI	GCNNNNNNNGC	8 cut(s)	595, 607, 1122, 1232, 1536, 1545, 1642, 1974
NarI	GGCGCC	1 cut(s)	1050
NciI	CCSGG	2 cut(s)	1320, 1545
NcoI	CCATGG	1 cut(s)	788
NdeI	CATATG	1 cut(s)	1611
NlaIII	CATG	4 cut(s)	792, 1243, 1756, 1852
NlaIV	GGNNCC	5 cut(s)	786, 1051, 1270, 1359, 1792
NmeAIII	GCCGAG	1 cut(s)	35
NmuCI	GTSAC	2 cut(s)	949, 2056
NspI	RCATGY	2 cut(s)	1243, 1852
PalAI	GGCGCGCC	1 cut(s)	517
PaqCI	CACCTGC	1 cut(s)	2069
PauI	GCGCGC	1 cut(s)	517
PceI	AGGCCT	1 cut(s)	866
PciSI	GCTCTTC	1 cut(s)	1898
PcsI	WCGNNNNNNNCGW	1 cut(s)	553
PctI	GAATGC	1 cut(s)	1979
PdmI	GAANNNNTTC	1 cut(s)	1301
PfeI	GAWTC	1 cut(s)	1720
PfoI	TCCNGGA	1 cut(s)	1215
PleI	GAGTC	1 cut(s)	1634
PluTI	GGCGCC	1 cut(s)	1053
PpsI	GAGTC	1 cut(s)	1634
Ppu21I	YACGTR	1 cut(s)	1431
PpuMI	RGGWCCY	1 cut(s)	1790
Psp5II	RGGWCCY	1 cut(s)	1790
Psp6I	CCWGG	7 cut(s)	583, 745, 991, 1013, 1150, 1215, 1324
PspFI	CCCAGC	2 cut(s)	362, 1045
PspGI	CCWGG	7 cut(s)	583, 745, 991, 1013, 1150, 1215, 1324
PspN4I	GGNNCC	5 cut(s)	786, 1051, 1270, 1359, 1792
PspPI	GGNCC	8 cut(s)	1011, 1103, 1213, 1219, 1322, 1340, 1559, 1790
PspPPI	RGGWCCY	1 cut(s)	1790
PsrI	GAACNNNNNNTAC	2 cut(s)	1424, 1456
PstI	CTGCAG	1 cut(s)	1190
PsuI	RGATCY	2 cut(s)	1173, 1357
PteI	GCGCGC	1 cut(s)	517
RsaI	GTAC	6 cut(s)	974, 1032, 1270, 1516, 1603, 2043
RsaNI	GTAC	6 cut(s)	973, 1031, 1269, 1515, 1602, 2042
RseI	CAYNNNNRTG	3 cut(s)	994, 1116, 2077
SapI	GCTCTTC	1 cut(s)	1898
SaqAI	TTAA	4 cut(s)	917, 1641, 1671, 1962
Sau96I	GGNCC	8 cut(s)	1011, 1103, 1213, 1219, 1322, 1340, 1559, 1790
SchI	GAGTC	1 cut(s)	1635
ScrFI	CCNGG	9 cut(s)	585, 747, 993, 1015, 1152, 1217, 1320, 1326, 1545
SfaNI	GCATC	5 cut(s)	4, 478, 597, 626, 2038
SfcI	CTRYAG	1 cut(s)	1186
SfoI	GGCGCC	1 cut(s)	1051
SgsI	GGCGCGCC	1 cut(s)	517
SinI	GGWCC	6 cut(s)	1011, 1213, 1219, 1322, 1340, 1790
SmiMI	CAYNNNNRTG	3 cut(s)	994, 1116, 2077
SmlI	CTYRAG	3 cut(s)	916, 1398, 1832
SmoI	CTYRAG	3 cut(s)	916, 1398, 1832
Sse9I	AATT	7 cut(s)	961, 1300, 1564, 1674, 1687, 1693, 1774
SseBI	AGGCCT	1 cut(s)	866
SspDI	GGCGCC	1 cut(s)	1049
SspMI	CTAG	3 cut(s)	234, 740, 753
StuI	AGGCCT	1 cut(s)	866
StyD4I	CCNGG	9 cut(s)	583, 745, 991, 1013, 1150, 1215, 1318, 1324, 1543
StyI	CCWWGG	3 cut(s)	511, 788, 2003
TaaI	ACNGT	5 cut(s)	616, 1255, 1285, 1440, 1493
TaiI	ACGT	3 cut(s)	1433, 1641, 1881
TasI	AATT	7 cut(s)	961, 1300, 1564, 1674, 1687, 1693, 1774
TatI	WGTACW	1 cut(s)	2041
TauI	GCSGC	3 cut(s)	598, 601, 1551
TfiI	GAWTC	1 cut(s)	1720
Tru1I	TTAA	4 cut(s)	917, 1641, 1671, 1962
Tru9I	TTAA	4 cut(s)	917, 1641, 1671, 1962
TscAI	CASTG	7 cut(s)	1187, 1237, 1314, 1604, 1626, 1637, 1721
TseFI	GTSAC	2 cut(s)	949, 2056
TseI	GCWGC	8 cut(s)	1185, 1226, 1259, 1262, 1509, 1530, 2008, 2051
Tsp45I	GTSAC	2 cut(s)	949, 2056
TspDTI	ATGAA	2 cut(s)	1718, 1773
TspGWI	ACGGA	1 cut(s)	941
TspRI	CASTG	7 cut(s)	1187, 1237, 1314, 1604, 1626, 1637, 1721
Vha464I	CTTAAG	1 cut(s)	916
VpaK11BI	GGWCC	6 cut(s)	1011, 1213, 1219, 1322, 1340, 1790
XapI	RAATTY	2 cut(s)	1300, 1564
XceI	RCATGY	2 cut(s)	1243, 1852
XmiI	GTMKAC	1 cut(s)	1998
XmnI	GAANNNNTTC	1 cut(s)	1301
XspI	CTAG	3 cut(s)	234, 740, 753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.