Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001945

Physical Location & Seq

Genomic Coordinates Forward (+)

74034475 .. 74039731

Gene Structure 5257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG562000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGTCGACGGATCTCAGTGATTTCATCGTCATCAAAGAAGGAGAGGCTGAGATTCTCATGCATACTAAAAACCAAGTCTTTTACAACAAAACCCAGGTTAACAATAGAGACATCTCGATTGCTGTTATGAGGGCATTTGTAGCCAAACGCAAAGAGGAGCATGAAGCGAGATTGTCCAAGAAAAAAAAGTCAGCTCCCACGGATTCTGAGAAAGATGTTTCAGAATCTGTTGTAGAAGAAGCTTCTAATGAACCTGCTATTAACGGAAATTCCAATGGAGATTGTGAAATGCCAGAAGATATATCTCAAGATGAACCATGTAGCATTCCAGAAGAACCAAGCAAGACCACGGAGGGAAAAGGACGAGGCGATTTGAAGCCACCAAGAGTTCTTGAGGCCTTGTCAGCTTCTGGCTTAAGAGCTCTTAGGTATGCTCGTGAAGTAGAAGGGATTGGTCAAGTTGTGGCCCTAGATAATGATAAAGTATCAGTTGAAGCTTGTAGGAGAAACATCAAGTTCAATGGTTCAGTTGCATGTTCAAAGGTGGAATCACATCTTGTTGATGCTCGTGTGCATATGCTCACCCACCCAAAAGAATTCGATGTGGTTGATCTTGATCCTTATGGTTCTCCTTCTGTCTTCTTGGATTCTGCGATTCAAGCTGTTGCTGATGGAGGCATGCTCATGTGTACTGCAACGGATATGGCAGTACTATGTGGTGGTAATGGGGAGGTTTGCTATTCAAAATATGGTTCCTATCCATTGAAAGGGAAATATTGCCACGAAATGGCTCTGAGGATCCTCTTAGCCTGCATTGAGAGCCATGCAAATCGGTACAAAAGATACATTGTTCCTGTGCTATCTGTTCAGATGGACTTTTATGTTCGTGTTTTCGTCCGAGTCTACTCCTCGGCAAGTGCTATGAAGAACACTCCCCTTAAGCTTTCCTATGTTTATCAGTGCATTGGATGTGATTCTTTTCATCTGCAGCCTCTTGGAAGGACGGTCACTAAGAACACCAGTGTGAGATATCTTCCGGGTTTTGGTCCCATTGTTCCTCAAGAATGCAGTGATTGTGGGAAGAAATTCAATATGGGTGGGCCTATATGGTCTGCTCCTATCCATGATCAAGAATGGGTTACTTCCATACTATCAGATGTGAAATCAATGAAGGATCGTTATCCCGCTTATGATCGCATCTCGGCTGTATTGACAACAATCTCAGAGGAATTGCCAGATGTTCCTCTGTTCTTGAGTCTGCACAGCCTCTGTGCCACTCTCAAGTGCACCTCCCCATCTGCAGTGATTTTCCGTTCTGCTGTGATCAATGCAGGATATCGTATATCTGGAACTCATGTAAACCCATTGGGGTTGAAGTCAGATGCTCCTATGGATATCATTTGGGACATAATGCGCTGCTGGGTGAGTCTCTTCAGTTCTTGCTTGTTTCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0002940 GO:0003674 GO:0003824 GO:0004809 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008173 GO:0008175 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016423 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TRM

Protein Analysis

485

Amino Acids

53.56

Weight (kDa)

6.16

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TRM	PF02005	12 - 472	2.2e-115	N2,N2-dimethylguanosine tRNA methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001945)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02320 AT5G15810
fragaria_vesca	FvH4_6g46450 FvH4_6g46450 FvH4_6g46450
malus_domestica	MD09G1073500.v1.1 MD17G1065000.v1.1
prunus_persica	Prupe.3G249800_v2.0.a1 Prupe.3G249800_v2.0.a1
pyrus_communis	pycom09g00090 pycom17g06500
rosa_chinensis	RchiOBHm_Chr2g0130081 RchiOBHm_Chr2g0165001
rosa_laevigata	RLG00000008503 RLG00000021506
rosa_multiflora	Rmu_co8255059.1_g000001 Rmu_sc0001097.1_g000019 Rmu_sc0002970.1_g000011 Rmu_sc0022378.1_g000001 Rmu_sc0026009.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025420 Rroxscaffold_1G00038210 Rroxscaffold_1G00074000 Rroxscaffold_2G00083080 Rroxscaffold_5G00359260 Rroxscaffold_7G00169970 Rroxscaffold_7G00192270 Rroxscaffold_7G00205690
rosa_rugosa	Rorug02G0291000 Rorug02G0512100
rosa_samantha	Rh1AG215300 Rh1CG199800 Rh1DG211500 Rh2AG509800 Rh2AG580200 Rh2BG350400 Rh2BG572900 Rh2BG591500 Rh2CG495000 Rh2CG562000 Rh2DG601600 Rh4CG060300
rosa_wichuraiana	Rw0G021070 Rw2G027680 Rw2G048160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	262
AccB7I	CCANNNNNTGG	1 cut(s)	787
AccI	GTMKAC	2 cut(s)	5, 903
AciI	CCGC	1 cut(s)	1185
AclWI	GGATC	5 cut(s)	18, 611, 793, 806, 1182
AcsI	RAATTY	3 cut(s)	268, 596, 1085
AcuI	CTGAAG	1 cut(s)	1417
AfaI	GTAC	3 cut(s)	691, 711, 836
AfiI	CCNNNNNNNGG	3 cut(s)	767, 787, 1043
AflII	CTTAAG	2 cut(s)	415, 938
AgsI	TTSAA	9 cut(s)	376, 494, 520, 540, 659, 744, 766, 1090, 1375
AjnI	CCWGG	1 cut(s)	93
AleI	CACNNNNGTG	1 cut(s)	1022
AluBI	AGCT	7 cut(s)	194, 242, 407, 422, 497, 662, 943
AluI	AGCT	7 cut(s)	194, 242, 407, 422, 497, 662, 943
Alw21I	GWGCWC	2 cut(s)	424, 1289
Alw26I	GTCTC	2 cut(s)	102, 1433
Alw44I	GTGCAC	1 cut(s)	1285
AlwI	GGATC	5 cut(s)	18, 611, 793, 806, 1182
AlwNI	CAGNNNCTG	3 cut(s)	227, 410, 1269
AoxI	GGCC	3 cut(s)	396, 465, 1100
ApaLI	GTGCAC	1 cut(s)	1285
ApeKI	GCWGC	2 cut(s)	988, 1416
ApoI	RAATTY	3 cut(s)	268, 596, 1085
Asp700I	GAANNNNTTC	1 cut(s)	1085
AspLEI	GCGC	1 cut(s)	1416
AspS9I	GGNCC	3 cut(s)	466, 1046, 1100
AsuC2I	CCSGG	1 cut(s)	1038
AsuHPI	GGTGA	2 cut(s)	574, 1435
AvaII	GGWCC	1 cut(s)	1046
BaeGI	GKGCMC	1 cut(s)	1289
BamHI	GGATCC	1 cut(s)	798
BanII	GRGCYC	1 cut(s)	424
BauI	CACGAG	2 cut(s)	435, 567
BbsI	GAAGAC	1 cut(s)	631
Bbv12I	GWGCWC	2 cut(s)	424, 1289
BbvI	GCAGC	2 cut(s)	1000, 1403
BccI	CCATC	3 cut(s)	665, 865, 1303
BciT130I	CCWGG	1 cut(s)	95
BclI	TGATCA	2 cut(s)	1126, 1323
BcnI	CCSGG	1 cut(s)	1038
BcoDI	GTCTC	2 cut(s)	102, 1433
BfaI	CTAG	1 cut(s)	470
BfmI	CTRYAG	2 cut(s)	986, 1299
BfrI	CTTAAG	2 cut(s)	415, 938
BfuAI	ACCTGC	1 cut(s)	262
BisI	GCNGC	2 cut(s)	989, 1417
BlsI	GCNGC	2 cut(s)	990, 1418
BmcAI	AGTACT	1 cut(s)	711
Bme1390I	CCNGG	2 cut(s)	95, 1038
Bme18I	GGWCC	1 cut(s)	1046
BmgT120I	GGNCC	3 cut(s)	466, 1046, 1100
BmiI	GGNNCC	3 cut(s)	754, 800, 1048
BmrFI	CCNGG	2 cut(s)	95, 1038
BmsI	GCATC	3 cut(s)	553, 1206, 1372
BpiI	GAAGAC	1 cut(s)	631
BplI	GAGNNNNNCTC	2 cut(s)	666, 698
BpuEI	CTTGAG	5 cut(s)	291, 413, 1044, 1265, 1273
BpuMI	CCSGG	1 cut(s)	1038
BsaBI	GATNNNNATC	2 cut(s)	615, 1179
BsaJI	CCNNGG	4 cut(s)	93, 198, 348, 909
Bsc4I	CCNNNNNNNGG	3 cut(s)	767, 787, 1043
Bse1I	ACTGG	1 cut(s)	1020
Bse8I	GATNNNNATC	2 cut(s)	615, 1179
BseBI	CCWGG	1 cut(s)	95
BseDI	CCNNGG	4 cut(s)	93, 198, 348, 909
BseGI	GGATG	1 cut(s)	974
BseJI	GATNNNNATC	2 cut(s)	615, 1179
BseLI	CCNNNNNNNGG	3 cut(s)	767, 787, 1043
BseMII	CTCAG	5 cut(s)	28, 39, 198, 785, 1236
BseNI	ACTGG	1 cut(s)	1020
BseRI	GAGGAG	2 cut(s)	170, 898
BseSI	GKGCMC	1 cut(s)	1289
BseXI	GCAGC	2 cut(s)	1000, 1403
BseYI	CCCAGC	1 cut(s)	1419
BsgI	GTGCAG	1 cut(s)	1244
BshFI	GGCC	3 cut(s)	398, 467, 1102
BsiHKAI	GWGCWC	2 cut(s)	424, 1289
BsiSI	CCGG	1 cut(s)	1037
BslFI	GGGAC	2 cut(s)	1032, 1418
BslI	CCNNNNNNNGG	3 cut(s)	767, 787, 1043
BsmAI	GTCTC	2 cut(s)	102, 1433
BsmFI	GGGAC	2 cut(s)	1032, 1418
BsmI	GAATGC	2 cut(s)	324, 1070
BsnI	GGCC	3 cut(s)	398, 467, 1102
Bsp1286I	GDGCHC	2 cut(s)	424, 1289
Bsp143I	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
BspACI	CCGC	1 cut(s)	1185
BspANI	GGCC	3 cut(s)	398, 467, 1102
BspCNI	CTCAG	5 cut(s)	27, 40, 199, 786, 1235
BspLI	GGNNCC	3 cut(s)	754, 800, 1048
BspMAI	CTGCAG	2 cut(s)	990, 1303
BspMI	ACCTGC	1 cut(s)	262
BspPI	GGATC	5 cut(s)	18, 611, 793, 806, 1182
BspTI	CTTAAG	2 cut(s)	415, 938
BsrI	ACTGG	1 cut(s)	1020
BssECI	CCNNGG	4 cut(s)	93, 198, 348, 909
BssMI	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
BssSI	CACGAG	2 cut(s)	435, 567
Bst2BI	CACGAG	2 cut(s)	435, 567
Bst2UI	CCWGG	1 cut(s)	95
Bst4CI	ACNGT	1 cut(s)	1006
Bst6I	CTCTTC	1 cut(s)	1436
BstAFI	CTTAAG	2 cut(s)	415, 938
BstC8I	GCNNGC	2 cut(s)	680, 811
BstDEI	CTNAG	8 cut(s)	14, 48, 207, 425, 794, 805, 1011, 1222
BstDSI	CCRYGG	2 cut(s)	198, 348
BstF5I	GGATG	1 cut(s)	974
BstHHI	GCGC	1 cut(s)	1416
BstKTI	GATC	8 cut(s)	13, 613, 619, 801, 1129, 1177, 1195, 1326
BstMAI	GTCTC	2 cut(s)	102, 1433
BstMBI	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
BstMWI	GCNNNNNNNGC	4 cut(s)	140, 404, 659, 819
BstNI	CCWGG	1 cut(s)	95
BstNSI	RCATGY	2 cut(s)	537, 682
BstSCI	CCNGG	2 cut(s)	93, 1036
BstSFI	CTRYAG	2 cut(s)	986, 1299
BstSLI	GKGCMC	1 cut(s)	1289
BstV1I	GCAGC	2 cut(s)	1000, 1403
BstV2I	GAAGAC	1 cut(s)	631
BstX2I	RGATCY	2 cut(s)	10, 798
BstYI	RGATCY	2 cut(s)	10, 798
BsuRI	GGCC	3 cut(s)	398, 467, 1102
BtgI	CCRYGG	2 cut(s)	198, 348
BtsCI	GGATG	1 cut(s)	974
BtsI	GCAGTG	2 cut(s)	1075, 1308
BtsIMutI	CAGTG	5 cut(s)	22, 965, 1027, 1075, 1308
BveI	ACCTGC	1 cut(s)	262
Cac8I	GCNNGC	2 cut(s)	680, 811
CaiI	CAGNNNCTG	3 cut(s)	227, 410, 1269
CfoI	GCGC	1 cut(s)	1416
Cfr13I	GGNCC	3 cut(s)	466, 1046, 1100
Csp6I	GTAC	3 cut(s)	690, 710, 835
CspCI	CAANNNNNGTGG	2 cut(s)	1078, 1113
CviAII	CATG	9 cut(s)	58, 161, 318, 534, 679, 685, 824, 1124, 1355
CviQI	GTAC	3 cut(s)	690, 710, 835
DdeI	CTNAG	8 cut(s)	14, 48, 207, 425, 794, 805, 1011, 1222
DpnI	GATC	8 cut(s)	12, 612, 618, 800, 1128, 1176, 1194, 1325
DpnII	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
Eam1104I	CTCTTC	1 cut(s)	1436
EarI	CTCTTC	1 cut(s)	1436
Ecl136II	GAGCTC	1 cut(s)	422
Eco147I	AGGCCT	1 cut(s)	398
Eco24I	GRGCYC	1 cut(s)	424
Eco32I	GATATC	3 cut(s)	1031, 1337, 1396
Eco47I	GGWCC	1 cut(s)	1046
Eco53kI	GAGCTC	1 cut(s)	422
Eco57I	CTGAAG	1 cut(s)	1417
EcoICRI	GAGCTC	1 cut(s)	422
EcoRI	GAATTC	1 cut(s)	596
EcoRII	CCWGG	1 cut(s)	93
EcoRV	GATATC	3 cut(s)	1031, 1337, 1396
EcoT22I	ATGCAT	1 cut(s)	63
EcoT38I	GRGCYC	1 cut(s)	424
FaeI	CATG	9 cut(s)	61, 164, 321, 537, 682, 688, 827, 1127, 1358
FaqI	GGGAC	2 cut(s)	1032, 1418
FatI	CATG	9 cut(s)	57, 160, 317, 533, 678, 684, 823, 1123, 1354
FauI	CCCGC	1 cut(s)	1192
FauNDI	CATATG	1 cut(s)	576
FbaI	TGATCA	2 cut(s)	1126, 1323
FblI	GTMKAC	2 cut(s)	5, 903
Fnu4HI	GCNGC	2 cut(s)	989, 1417
FokI	GGATG	1 cut(s)	981
FriOI	GRGCYC	1 cut(s)	424
Fsp4HI	GCNGC	2 cut(s)	989, 1417
FspBI	CTAG	1 cut(s)	470
GlaI	GCGC	1 cut(s)	1415
GluI	GCNGC	2 cut(s)	989, 1417
GsaI	CCCAGC	1 cut(s)	1423
HaeIII	GGCC	3 cut(s)	398, 467, 1102
HapII	CCGG	1 cut(s)	1037
HhaI	GCGC	1 cut(s)	1416
Hin1II	CATG	9 cut(s)	61, 164, 321, 537, 682, 688, 827, 1127, 1358
Hin6I	GCGC	1 cut(s)	1414
HinP1I	GCGC	1 cut(s)	1414
HincII	GTYRAC	2 cut(s)	6, 100
HindII	GTYRAC	2 cut(s)	6, 100
HindIII	AAGCTT	3 cut(s)	240, 495, 941
HpaI	GTTAAC	1 cut(s)	100
HpaII	CCGG	1 cut(s)	1037
HphI	GGTGA	2 cut(s)	574, 1435
Hpy166II	GTNNAC	6 cut(s)	6, 100, 690, 904, 1287, 1360
Hpy188I	TCNGA	8 cut(s)	208, 223, 795, 870, 899, 1156, 1225, 1381
Hpy8I	GTNNAC	6 cut(s)	6, 100, 690, 904, 1287, 1360
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	5 cut(s)	32, 440, 642, 993, 1165
HpyCH4III	ACNGT	1 cut(s)	1006
HpyF10VI	GCNNNNNNNGC	4 cut(s)	140, 404, 659, 819
HpyF3I	CTNAG	8 cut(s)	14, 48, 207, 425, 794, 805, 1011, 1222
Hsp92II	CATG	9 cut(s)	61, 164, 321, 537, 682, 688, 827, 1127, 1358
HspAI	GCGC	1 cut(s)	1414
Ksp22I	TGATCA	2 cut(s)	1126, 1323
KspAI	GTTAAC	1 cut(s)	100
Kzo9I	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
LmnI	GCTCC	4 cut(s)	157, 199, 1120, 1390
Lsp1109I	GCAGC	2 cut(s)	1000, 1403
LweI	GCATC	3 cut(s)	553, 1206, 1372
MaeI	CTAG	1 cut(s)	470
MaeIII	GTNAC	2 cut(s)	1006, 1138
MalI	GATC	8 cut(s)	12, 612, 618, 800, 1128, 1176, 1194, 1325
MboI	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
MboII	GAAGA	8 cut(s)	248, 308, 344, 631, 937, 1025, 1093, 1423
MflI	RGATCY	2 cut(s)	10, 798
MhlI	GDGCHC	2 cut(s)	424, 1289
MluCI	AATT	4 cut(s)	268, 596, 1085, 1229
MlyI	GAGTC	3 cut(s)	909, 1264, 1435
Mph1103I	ATGCAT	1 cut(s)	63
MroXI	GAANNNNTTC	1 cut(s)	1085
MseI	TTAA	4 cut(s)	99, 261, 416, 939
MslI	CAYNNNNRTG	2 cut(s)	683, 1022
MspCI	CTTAAG	2 cut(s)	415, 938
MspI	CCGG	1 cut(s)	1037
MspR9I	CCNGG	2 cut(s)	95, 1038
Mva1269I	GAATGC	2 cut(s)	324, 1070
MvaI	CCWGG	1 cut(s)	95
MwoI	GCNNNNNNNGC	4 cut(s)	140, 404, 659, 819
NciI	CCSGG	1 cut(s)	1038
NdeI	CATATG	1 cut(s)	576
NdeII	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
NlaIII	CATG	9 cut(s)	61, 164, 321, 537, 682, 688, 827, 1127, 1358
NlaIV	GGNNCC	3 cut(s)	754, 800, 1048
NmeAIII	GCCGAG	2 cut(s)	890, 1181
NmuCI	GTSAC	1 cut(s)	1006
NsiI	ATGCAT	1 cut(s)	63
NspI	RCATGY	2 cut(s)	537, 682
OliI	CACNNNNGTG	1 cut(s)	1022
PaeI	GCATGC	1 cut(s)	682
PceI	AGGCCT	1 cut(s)	398
PctI	GAATGC	2 cut(s)	324, 1070
PdmI	GAANNNNTTC	1 cut(s)	1085
PfeI	GAWTC	7 cut(s)	52, 203, 224, 548, 647, 655, 974
PflMI	CCANNNNNTGG	1 cut(s)	787
PkrI	GCNGC	2 cut(s)	990, 1418
PleI	GAGTC	3 cut(s)	908, 1263, 1434
PpsI	GAGTC	3 cut(s)	908, 1263, 1434
Psp124BI	GAGCTC	1 cut(s)	424
Psp6I	CCWGG	1 cut(s)	93
PspFI	CCCAGC	1 cut(s)	1419
PspGI	CCWGG	1 cut(s)	93
PspN4I	GGNNCC	3 cut(s)	754, 800, 1048
PspPI	GGNCC	3 cut(s)	466, 1046, 1100
PstI	CTGCAG	2 cut(s)	990, 1303
PstNI	CAGNNNCTG	3 cut(s)	227, 410, 1269
PsuI	RGATCY	2 cut(s)	10, 798
RsaI	GTAC	3 cut(s)	691, 711, 836
RsaNI	GTAC	3 cut(s)	690, 710, 835
RseI	CAYNNNNRTG	2 cut(s)	683, 1022
SacI	GAGCTC	1 cut(s)	424
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	4 cut(s)	99, 261, 416, 939
SatI	GCNGC	2 cut(s)	989, 1417
Sau3AI	GATC	8 cut(s)	10, 610, 616, 798, 1126, 1174, 1192, 1323
Sau96I	GGNCC	3 cut(s)	466, 1046, 1100
ScaI	AGTACT	1 cut(s)	711
SchI	GAGTC	3 cut(s)	909, 1264, 1435
ScrFI	CCNGG	2 cut(s)	95, 1038
SduI	GDGCHC	2 cut(s)	424, 1289
SfaNI	GCATC	3 cut(s)	553, 1206, 1372
SfcI	CTRYAG	2 cut(s)	986, 1299
SinI	GGWCC	1 cut(s)	1046
SmiMI	CAYNNNNRTG	2 cut(s)	683, 1022
SmlI	CTYRAG	7 cut(s)	306, 392, 415, 938, 1059, 1252, 1280
SmoI	CTYRAG	7 cut(s)	306, 392, 415, 938, 1059, 1252, 1280
SphI	GCATGC	1 cut(s)	682
Sse9I	AATT	4 cut(s)	268, 596, 1085, 1229
SseBI	AGGCCT	1 cut(s)	398
SsiI	CCGC	1 cut(s)	1185
SspI	AATATT	1 cut(s)	776
SspMI	CTAG	1 cut(s)	470
SstI	GAGCTC	1 cut(s)	424
StuI	AGGCCT	1 cut(s)	398
StyD4I	CCNGG	2 cut(s)	93, 1036
TaaI	ACNGT	1 cut(s)	1006
TaqI	TCGA	3 cut(s)	5, 116, 600
TasI	AATT	4 cut(s)	268, 596, 1085, 1229
TatI	WGTACW	2 cut(s)	689, 709
TfiI	GAWTC	7 cut(s)	52, 203, 224, 548, 647, 655, 974
Tru1I	TTAA	4 cut(s)	99, 261, 416, 939
Tru9I	TTAA	4 cut(s)	99, 261, 416, 939
TscAI	CASTG	5 cut(s)	22, 965, 1027, 1075, 1308
TseFI	GTSAC	1 cut(s)	1006
TseI	GCWGC	2 cut(s)	988, 1416
Tsp45I	GTSAC	1 cut(s)	1006
TspDTI	ATGAA	7 cut(s)	13, 177, 264, 327, 938, 971, 1184
TspGWI	ACGGA	6 cut(s)	23, 215, 279, 365, 713, 1301
TspRI	CASTG	5 cut(s)	22, 965, 1027, 1075, 1308
Van91I	CCANNNNNTGG	1 cut(s)	787
Vha464I	CTTAAG	2 cut(s)	415, 938
VneI	GTGCAC	1 cut(s)	1285
VpaK11BI	GGWCC	1 cut(s)	1046
XapI	RAATTY	3 cut(s)	268, 596, 1085
XceI	RCATGY	2 cut(s)	537, 682
XmiI	GTMKAC	2 cut(s)	5, 903
XmnI	GAANNNNTTC	1 cut(s)	1085
XspI	CTAG	1 cut(s)	470
ZrmI	AGTACT	1 cut(s)	711
Zsp2I	ATGCAT	1 cut(s)	63

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.