Rhodanese-like domain-containing protein 11
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24750 |
| fragaria_vesca | FvH4_5g06601 FvH4_5g06601 |
| malus_domestica | MD06G1224500.v1.1 MD14G1168400.v1.1 MD14G1168500.v1.1 |
| prunus_persica | Prupe.5G163400_v2.0.a1 |
| pyrus_communis | pycom06g14590 pycom14g14040 |
| rosa_chinensis | RchiOBHm_Chr1g0313851 RchiOBHm_Chr2g0119491 RchiOBHm_Chr3g0475211 RchiOBHm_Chr7g0192141 |
| rosa_laevigata | RLG00000004393 |
| rosa_multiflora | Rmu_co8284265.1_g000001 Rmu_sc0000532.1_g000033 Rmu_sc0002164.1_g000021 Rmu_ssc0000421.1_g000056 |
| rosa_roxburghii | Rroxscaffold_3G00263270 Rroxscaffold_5G00338510 |
| rosa_rugosa | Rorug02G0315800 |
| rosa_samantha | Rh1CG190600 Rh2CG296500 Rh2CG301500 Rh2DG305300 Rh2DG333600 Rh3AG197200 Rh3CG297700 Rh4BG186600 Rh4BG221800 Rh5CG365300 Rh6AG223100 Rh6CG220800 Rh7AG123500 Rh7BG125200 Rh7CG127900 Rh7DG127100 |
| rosa_wichuraiana | Rw2G005530 Rw3G015860 Rw3G028470 Rw7G010550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 243 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 13 |
| AcsI | RAATTY | 1 cut(s) | 467 |
| AcuI | CTGAAG | 1 cut(s) | 654 |
| AfaI | GTAC | 1 cut(s) | 581 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 607, 688 |
| AgsI | TTSAA | 5 cut(s) | 194, 206, 289, 392, 744 |
| AjnI | CCWGG | 1 cut(s) | 437 |
| AluBI | AGCT | 8 cut(s) | 11, 59, 197, 266, 377, 563, 688, 812 |
| AluI | AGCT | 8 cut(s) | 11, 59, 197, 266, 377, 563, 688, 812 |
| Alw26I | GTCTC | 2 cut(s) | 620, 705 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 785 |
| Ama87I | CYCGRG | 1 cut(s) | 683 |
| AoxI | GGCC | 2 cut(s) | 73, 746 |
| ApeKI | GCWGC | 2 cut(s) | 308, 563 |
| ApoI | RAATTY | 1 cut(s) | 467 |
| AsuHPI | GGTGA | 2 cut(s) | 473, 695 |
| AvaI | CYCGRG | 1 cut(s) | 683 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 781, 813 |
| BbvI | GCAGC | 2 cut(s) | 295, 550 |
| BccI | CCATC | 1 cut(s) | 318 |
| BciT130I | CCWGG | 1 cut(s) | 439 |
| BcoDI | GTCTC | 2 cut(s) | 620, 705 |
| BfaI | CTAG | 1 cut(s) | 623 |
| BfmI | CTRYAG | 2 cut(s) | 558, 592 |
| BisI | GCNGC | 2 cut(s) | 309, 564 |
| BlsI | GCNGC | 2 cut(s) | 310, 565 |
| Bme1390I | CCNGG | 1 cut(s) | 439 |
| BmeT110I | CYCGRG | 1 cut(s) | 683 |
| BmrFI | CCNGG | 1 cut(s) | 439 |
| BmsI | GCATC | 3 cut(s) | 319, 406, 701 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 607, 688 |
| Bse1I | ACTGG | 1 cut(s) | 87 |
| BseBI | CCWGG | 1 cut(s) | 439 |
| BseGI | GGATG | 1 cut(s) | 334 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 607, 688 |
| BseMII | CTCAG | 1 cut(s) | 687 |
| BseNI | ACTGG | 1 cut(s) | 87 |
| BseXI | GCAGC | 2 cut(s) | 295, 550 |
| BseYI | CCCAGC | 1 cut(s) | 377 |
| BshFI | GGCC | 2 cut(s) | 75, 748 |
| BsiHKCI | CYCGRG | 1 cut(s) | 683 |
| BslFI | GGGAC | 1 cut(s) | 356 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 607, 688 |
| BsmAI | GTCTC | 2 cut(s) | 620, 705 |
| BsmFI | GGGAC | 1 cut(s) | 356 |
| BsmI | GAATGC | 1 cut(s) | 264 |
| BsnI | GGCC | 2 cut(s) | 75, 748 |
| BsoBI | CYCGRG | 1 cut(s) | 683 |
| Bsp1407I | TGTACA | 1 cut(s) | 579 |
| BspANI | GGCC | 2 cut(s) | 75, 748 |
| BspCNI | CTCAG | 1 cut(s) | 688 |
| BspQI | GCTCTTC | 1 cut(s) | 204 |
| BsrGI | TGTACA | 1 cut(s) | 579 |
| BsrI | ACTGG | 1 cut(s) | 87 |
| Bst2UI | CCWGG | 1 cut(s) | 439 |
| Bst4CI | ACNGT | 1 cut(s) | 819 |
| Bst6I | CTCTTC | 2 cut(s) | 204, 633 |
| BstAUI | TGTACA | 1 cut(s) | 579 |
| BstC8I | GCNNGC | 4 cut(s) | 264, 589, 690, 777 |
| BstDEI | CTNAG | 1 cut(s) | 696 |
| BstF5I | GGATG | 1 cut(s) | 334 |
| BstMAI | GTCTC | 2 cut(s) | 620, 705 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 383 |
| BstNI | CCWGG | 1 cut(s) | 439 |
| BstSCI | CCNGG | 1 cut(s) | 437 |
| BstSFI | CTRYAG | 2 cut(s) | 558, 592 |
| BstV1I | GCAGC | 2 cut(s) | 295, 550 |
| BsuRI | GGCC | 2 cut(s) | 75, 748 |
| BtsCI | GGATG | 1 cut(s) | 334 |
| Cac8I | GCNNGC | 4 cut(s) | 264, 589, 690, 777 |
| CaiI | CAGNNNCTG | 1 cut(s) | 785 |
| Csp6I | GTAC | 1 cut(s) | 580 |
| CviAII | CATG | 2 cut(s) | 420, 707 |
| CviQI | GTAC | 1 cut(s) | 580 |
| DdeI | CTNAG | 1 cut(s) | 696 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 13 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 2 cut(s) | 204, 633 |
| EarI | CTCTTC | 2 cut(s) | 204, 633 |
| Eco147I | AGGCCT | 1 cut(s) | 748 |
| Eco57I | CTGAAG | 1 cut(s) | 654 |
| Eco88I | CYCGRG | 1 cut(s) | 683 |
| EcoRII | CCWGG | 1 cut(s) | 437 |
| EcoT22I | ATGCAT | 1 cut(s) | 421 |
| FaeI | CATG | 2 cut(s) | 423, 710 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 186, 218 |
| FaqI | GGGAC | 1 cut(s) | 356 |
| FatI | CATG | 2 cut(s) | 419, 706 |
| FauNDI | CATATG | 2 cut(s) | 174, 721 |
| Fnu4HI | GCNGC | 2 cut(s) | 309, 564 |
| FokI | GGATG | 1 cut(s) | 341 |
| Fsp4HI | GCNGC | 2 cut(s) | 309, 564 |
| FspBI | CTAG | 1 cut(s) | 623 |
| GluI | GCNGC | 2 cut(s) | 309, 564 |
| GsaI | CCCAGC | 1 cut(s) | 381 |
| HaeIII | GGCC | 2 cut(s) | 75, 748 |
| Hin1II | CATG | 2 cut(s) | 423, 710 |
| HinfI | GANTC | 5 cut(s) | 138, 442, 504, 698, 712 |
| HphI | GGTGA | 2 cut(s) | 473, 695 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 646 |
| Hpy188I | TCNGA | 4 cut(s) | 149, 336, 697, 770 |
| Hpy188III | TCNNGA | 3 cut(s) | 413, 623, 786 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 646 |
| HpyAV | CCTTC | 3 cut(s) | 419, 613, 783 |
| HpyCH4III | ACNGT | 1 cut(s) | 819 |
| HpyCH4IV | ACGT | 1 cut(s) | 14 |
| HpyCH4V | TGCA | 3 cut(s) | 262, 386, 419 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 383 |
| HpyF3I | CTNAG | 1 cut(s) | 696 |
| HpySE526I | ACGT | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 423, 710 |
| LguI | GCTCTTC | 1 cut(s) | 204 |
| Lsp1109I | GCAGC | 2 cut(s) | 295, 550 |
| LweI | GCATC | 3 cut(s) | 319, 406, 701 |
| MaeI | CTAG | 1 cut(s) | 623 |
| MaeII | ACGT | 1 cut(s) | 14 |
| MaeIII | GTNAC | 1 cut(s) | 461 |
| MboII | GAAGA | 8 cut(s) | 125, 128, 131, 191, 194, 287, 647, 650 |
| MluCI | AATT | 3 cut(s) | 166, 387, 467 |
| MlyI | GAGTC | 2 cut(s) | 132, 707 |
| MmeI | TCCRAC | 1 cut(s) | 457 |
| MnlI | CCTC | 5 cut(s) | 86, 231, 565, 634, 754 |
| Mph1103I | ATGCAT | 1 cut(s) | 421 |
| MseI | TTAA | 2 cut(s) | 354, 362 |
| MspR9I | CCNGG | 1 cut(s) | 439 |
| Mva1269I | GAATGC | 1 cut(s) | 264 |
| MvaI | CCWGG | 1 cut(s) | 439 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 383 |
| NdeI | CATATG | 2 cut(s) | 174, 721 |
| NlaIII | CATG | 2 cut(s) | 423, 710 |
| NmuCI | GTSAC | 1 cut(s) | 461 |
| NsiI | ATGCAT | 1 cut(s) | 421 |
| PceI | AGGCCT | 1 cut(s) | 748 |
| PciSI | GCTCTTC | 1 cut(s) | 204 |
| PctI | GAATGC | 1 cut(s) | 264 |
| PfeI | GAWTC | 3 cut(s) | 442, 504, 712 |
| PkrI | GCNGC | 2 cut(s) | 310, 565 |
| PleI | GAGTC | 2 cut(s) | 132, 706 |
| PpsI | GAGTC | 2 cut(s) | 132, 706 |
| PsiI | TTATAA | 1 cut(s) | 243 |
| Psp6I | CCWGG | 1 cut(s) | 437 |
| PspFI | CCCAGC | 1 cut(s) | 377 |
| PspGI | CCWGG | 1 cut(s) | 437 |
| PstNI | CAGNNNCTG | 1 cut(s) | 785 |
| RsaI | GTAC | 1 cut(s) | 581 |
| RsaNI | GTAC | 1 cut(s) | 580 |
| SapI | GCTCTTC | 1 cut(s) | 204 |
| SaqAI | TTAA | 2 cut(s) | 354, 362 |
| SatI | GCNGC | 2 cut(s) | 309, 564 |
| SchI | GAGTC | 2 cut(s) | 132, 707 |
| ScrFI | CCNGG | 1 cut(s) | 439 |
| SfaNI | GCATC | 3 cut(s) | 319, 406, 701 |
| SfcI | CTRYAG | 2 cut(s) | 558, 592 |
| Sse9I | AATT | 3 cut(s) | 166, 387, 467 |
| SseBI | AGGCCT | 1 cut(s) | 748 |
| SspI | AATATT | 1 cut(s) | 450 |
| SspMI | CTAG | 1 cut(s) | 623 |
| StuI | AGGCCT | 1 cut(s) | 748 |
| StyD4I | CCNGG | 1 cut(s) | 437 |
| TaaI | ACNGT | 1 cut(s) | 819 |
| TaiI | ACGT | 1 cut(s) | 17 |
| TaqI | TCGA | 2 cut(s) | 282, 471 |
| TasI | AATT | 3 cut(s) | 166, 387, 467 |
| TatI | WGTACW | 1 cut(s) | 579 |
| TfiI | GAWTC | 3 cut(s) | 442, 504, 712 |
| Tru1I | TTAA | 2 cut(s) | 354, 362 |
| Tru9I | TTAA | 2 cut(s) | 354, 362 |
| TseFI | GTSAC | 1 cut(s) | 461 |
| TseI | GCWGC | 2 cut(s) | 308, 563 |
| Tsp45I | GTSAC | 1 cut(s) | 461 |
| TspDTI | ATGAA | 2 cut(s) | 191, 288 |
| TspGWI | ACGGA | 1 cut(s) | 386 |
| XapI | RAATTY | 1 cut(s) | 467 |
| XbaI | TCTAGA | 1 cut(s) | 622 |
| XspI | CTAG | 1 cut(s) | 623 |
| Zsp2I | ATGCAT | 1 cut(s) | 421 |