Late embryogenesis abundant protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g17371 |
| rosa_chinensis | RchiOBHm_Chr3g0471371 RchiOBHm_Chr3g0471581 |
| rosa_laevigata | RLG00000010740 RLG00000015053 RLG00000024155 RLG00000024164 RLG00000024165 RLG00000024167 RLG00000024171 RLG00000024183 |
| rosa_multiflora | Rmu_sc0005634.1_g000007 Rmu_sc0006582.1_g000002 Rmu_sc0006582.1_g000017 Rmu_sc0010513.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00409790 Rroxscaffold_6G00409870 Rroxscaffold_6G00410010 Rroxscaffold_7G00161210 |
| rosa_rugosa | Rorug03G0118400 |
| rosa_samantha | Rh3AG168200 Rh3AG168600 Rh3AG168800 Rh3BG192600 Rh3BG193800 Rh3BG194100 Rh3BG194400 Rh3BG194600 Rh3CG182900 Rh3CG184700 Rh3CG184800 Rh3CG185000 Rh3CG185200 Rh3CG185300 Rh3DG180200 Rh3DG180400 Rh3DG180800 Rh3DG181000 Rh3DG181700 Rh3DG183000 Rh6AG466900 Rh6DG468700 |
| rosa_wichuraiana | Rw3G015740 Rw6G040700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 483 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 42 |
| AccI | GTMKAC | 2 cut(s) | 294, 483 |
| AccII | CGCG | 1 cut(s) | 165 |
| AciI | CCGC | 2 cut(s) | 82, 280 |
| AclWI | GGATC | 3 cut(s) | 118, 131, 168 |
| AcsI | RAATTY | 1 cut(s) | 641 |
| AcuI | CTGAAG | 2 cut(s) | 154, 583 |
| AcyI | GRCGYC | 2 cut(s) | 291, 480 |
| AfaI | GTAC | 2 cut(s) | 47, 146 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 42, 64, 286 |
| AgsI | TTSAA | 2 cut(s) | 349, 454 |
| AjnI | CCWGG | 2 cut(s) | 242, 355 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 422, 454 |
| AluBI | AGCT | 3 cut(s) | 111, 517, 621 |
| AluI | AGCT | 3 cut(s) | 111, 517, 621 |
| Alw26I | GTCTC | 3 cut(s) | 34, 324, 405 |
| AlwI | GGATC | 3 cut(s) | 118, 131, 168 |
| AoxI | GGCC | 1 cut(s) | 605 |
| ApaI | GGGCCC | 1 cut(s) | 609 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| ApoI | RAATTY | 1 cut(s) | 641 |
| AspLEI | GCGC | 3 cut(s) | 95, 167, 227 |
| AspS9I | GGNCC | 2 cut(s) | 605, 606 |
| AsuHPI | GGTGA | 2 cut(s) | 247, 256 |
| BaeGI | GKGCMC | 1 cut(s) | 609 |
| BamHI | GGATCC | 1 cut(s) | 123 |
| BanII | GRGCYC | 2 cut(s) | 549, 609 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| BbvI | GCAGC | 1 cut(s) | 82 |
| BccI | CCATC | 2 cut(s) | 140, 326 |
| BciT130I | CCWGG | 2 cut(s) | 244, 357 |
| BcoDI | GTCTC | 3 cut(s) | 34, 324, 405 |
| BfaI | CTAG | 1 cut(s) | 458 |
| BfoI | RGCGCY | 2 cut(s) | 96, 228 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlpI | GCTNAGC | 1 cut(s) | 498 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 2 cut(s) | 244, 357 |
| BmgT120I | GGNCC | 2 cut(s) | 605, 606 |
| BmiI | GGNNCC | 4 cut(s) | 125, 431, 606, 607 |
| BmrFI | CCNGG | 2 cut(s) | 244, 357 |
| BmrI | ACTGGG | 1 cut(s) | 681 |
| BmuI | ACTGGG | 1 cut(s) | 681 |
| BoxI | GACNNNNGTC | 1 cut(s) | 57 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 491, 523 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 498 |
| BpuEI | CTTGAG | 2 cut(s) | 581, 676 |
| BsaHI | GRCGYC | 2 cut(s) | 291, 480 |
| BsaI | GGTCTC | 1 cut(s) | 324 |
| BsaJI | CCNNGG | 1 cut(s) | 355 |
| BsaWI | WCCGGW | 1 cut(s) | 333 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 422, 452 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 42, 64, 286 |
| Bse1I | ACTGG | 2 cut(s) | 47, 676 |
| Bse3DI | GCAATG | 1 cut(s) | 620 |
| BseBI | CCWGG | 2 cut(s) | 244, 357 |
| BseDI | CCNNGG | 1 cut(s) | 355 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 42, 64, 286 |
| BseMI | GCAATG | 1 cut(s) | 620 |
| BseMII | CTCAG | 7 cut(s) | 63, 90, 212, 489, 522, 546, 570 |
| BseNI | ACTGG | 2 cut(s) | 47, 676 |
| BseRI | GAGGAG | 3 cut(s) | 251, 527, 596 |
| BseSI | GKGCMC | 1 cut(s) | 609 |
| BseXI | GCAGC | 1 cut(s) | 82 |
| Bsh1236I | CGCG | 1 cut(s) | 165 |
| Bsh1285I | CGRYCG | 1 cut(s) | 58 |
| BshFI | GGCC | 1 cut(s) | 607 |
| BsiEI | CGRYCG | 1 cut(s) | 58 |
| BsiSI | CCGG | 3 cut(s) | 65, 334, 556 |
| BsiWI | CGTACG | 1 cut(s) | 144 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 42, 64, 286 |
| BsmAI | GTCTC | 3 cut(s) | 34, 324, 405 |
| BsmI | GAATGC | 1 cut(s) | 704 |
| BsnI | GGCC | 1 cut(s) | 607 |
| Bso31I | GGTCTC | 1 cut(s) | 324 |
| Bsp120I | GGGCCC | 1 cut(s) | 605 |
| Bsp1286I | GDGCHC | 2 cut(s) | 549, 609 |
| Bsp143I | GATC | 3 cut(s) | 99, 123, 160 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 498 |
| BspACI | CCGC | 2 cut(s) | 82, 280 |
| BspANI | GGCC | 1 cut(s) | 607 |
| BspCNI | CTCAG | 7 cut(s) | 62, 89, 213, 490, 521, 545, 571 |
| BspFNI | CGCG | 1 cut(s) | 165 |
| BspLI | GGNNCC | 4 cut(s) | 125, 431, 606, 607 |
| BspPI | GGATC | 3 cut(s) | 118, 131, 168 |
| BspQI | GCTCTTC | 1 cut(s) | 528 |
| BspTNI | GGTCTC | 1 cut(s) | 324 |
| BsrDI | GCAATG | 1 cut(s) | 620 |
| BsrI | ACTGG | 2 cut(s) | 47, 676 |
| BssECI | CCNNGG | 1 cut(s) | 355 |
| BssMI | GATC | 3 cut(s) | 99, 123, 160 |
| BssNI | GRCGYC | 2 cut(s) | 291, 480 |
| Bst2UI | CCWGG | 2 cut(s) | 244, 357 |
| Bst4CI | ACNGT | 1 cut(s) | 59 |
| Bst6I | CTCTTC | 1 cut(s) | 528 |
| BstACI | GRCGYC | 2 cut(s) | 291, 480 |
| BstC8I | GCNNGC | 4 cut(s) | 70, 109, 113, 519 |
| BstDEI | CTNAG | 8 cut(s) | 49, 76, 221, 498, 508, 532, 579, 711 |
| BstFNI | CGCG | 1 cut(s) | 165 |
| BstH2I | RGCGCY | 2 cut(s) | 96, 228 |
| BstHHI | GCGC | 3 cut(s) | 95, 167, 227 |
| BstKTI | GATC | 3 cut(s) | 102, 126, 163 |
| BstMAI | GTCTC | 3 cut(s) | 34, 324, 405 |
| BstMBI | GATC | 3 cut(s) | 99, 123, 160 |
| BstMCI | CGRYCG | 1 cut(s) | 58 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 90, 104, 288 |
| BstNI | CCWGG | 2 cut(s) | 244, 357 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 57 |
| BstSCI | CCNGG | 2 cut(s) | 242, 355 |
| BstSLI | GKGCMC | 1 cut(s) | 609 |
| BstUI | CGCG | 1 cut(s) | 165 |
| BstV1I | GCAGC | 1 cut(s) | 82 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstX2I | RGATCY | 1 cut(s) | 123 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 139 |
| BstYI | RGATCY | 1 cut(s) | 123 |
| BsuRI | GGCC | 1 cut(s) | 607 |
| BtsIMutI | CAGTG | 1 cut(s) | 669 |
| Cac8I | GCNNGC | 4 cut(s) | 70, 109, 113, 519 |
| CfoI | GCGC | 3 cut(s) | 95, 167, 227 |
| Cfr13I | GGNCC | 2 cut(s) | 605, 606 |
| CseI | GACGC | 1 cut(s) | 280 |
| CsiI | ACCWGGT | 1 cut(s) | 242 |
| Csp6I | GTAC | 2 cut(s) | 46, 145 |
| CviAII | CATG | 3 cut(s) | 103, 286, 610 |
| CviQI | GTAC | 2 cut(s) | 46, 145 |
| DdeI | CTNAG | 8 cut(s) | 49, 76, 221, 498, 508, 532, 579, 711 |
| DpnI | GATC | 3 cut(s) | 101, 125, 162 |
| DpnII | GATC | 3 cut(s) | 99, 123, 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 528 |
| EarI | CTCTTC | 1 cut(s) | 528 |
| Eco24I | GRGCYC | 2 cut(s) | 549, 609 |
| Eco31I | GGTCTC | 1 cut(s) | 324 |
| Eco57I | CTGAAG | 2 cut(s) | 154, 583 |
| EcoO109I | RGGNCCY | 1 cut(s) | 605 |
| EcoRI | GAATTC | 1 cut(s) | 641 |
| EcoRII | CCWGG | 2 cut(s) | 242, 355 |
| EcoT38I | GRGCYC | 2 cut(s) | 549, 609 |
| FaeI | CATG | 3 cut(s) | 106, 289, 613 |
| FaiI | YATR | 8 cut(s) | 104, 287, 308, 327, 489, 552, 573, 611 |
| FatI | CATG | 3 cut(s) | 102, 285, 609 |
| FblI | GTMKAC | 2 cut(s) | 294, 483 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FriOI | GRGCYC | 2 cut(s) | 549, 609 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 458 |
| GlaI | GCGC | 3 cut(s) | 94, 166, 226 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeII | RGCGCY | 2 cut(s) | 96, 228 |
| HaeIII | GGCC | 1 cut(s) | 607 |
| HapII | CCGG | 3 cut(s) | 65, 334, 556 |
| HgaI | GACGC | 1 cut(s) | 280 |
| HhaI | GCGC | 3 cut(s) | 95, 167, 227 |
| Hin1I | GRCGYC | 2 cut(s) | 291, 480 |
| Hin1II | CATG | 3 cut(s) | 106, 289, 613 |
| Hin6I | GCGC | 3 cut(s) | 93, 165, 225 |
| HinP1I | GCGC | 3 cut(s) | 93, 165, 225 |
| HincII | GTYRAC | 2 cut(s) | 295, 484 |
| HindII | GTYRAC | 2 cut(s) | 295, 484 |
| HinfI | GANTC | 2 cut(s) | 74, 196 |
| HpaII | CCGG | 3 cut(s) | 65, 334, 556 |
| HphI | GGTGA | 2 cut(s) | 247, 256 |
| Hpy166II | GTNNAC | 2 cut(s) | 295, 484 |
| Hpy188I | TCNGA | 4 cut(s) | 7, 52, 79, 511 |
| Hpy188III | TCNNGA | 4 cut(s) | 121, 176, 193, 216 |
| Hpy8I | GTNNAC | 2 cut(s) | 295, 484 |
| Hpy99I | CGWCG | 3 cut(s) | 18, 296, 485 |
| HpyAV | CCTTC | 2 cut(s) | 178, 331 |
| HpyCH4III | ACNGT | 1 cut(s) | 59 |
| HpyCH4IV | ACGT | 1 cut(s) | 480 |
| HpyCH4V | TGCA | 3 cut(s) | 595, 613, 702 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 90, 104, 288 |
| HpyF3I | CTNAG | 8 cut(s) | 49, 76, 221, 498, 508, 532, 579, 711 |
| HpySE526I | ACGT | 1 cut(s) | 480 |
| Hsp92I | GRCGYC | 2 cut(s) | 291, 480 |
| Hsp92II | CATG | 3 cut(s) | 106, 289, 613 |
| HspAI | GCGC | 3 cut(s) | 93, 165, 225 |
| Kzo9I | GATC | 3 cut(s) | 99, 123, 160 |
| LguI | GCTCTTC | 1 cut(s) | 528 |
| LmnI | GCTCC | 1 cut(s) | 514 |
| Lsp1109I | GCAGC | 1 cut(s) | 82 |
| MabI | ACCWGGT | 1 cut(s) | 242 |
| MaeI | CTAG | 1 cut(s) | 458 |
| MaeII | ACGT | 1 cut(s) | 480 |
| MaeIII | GTNAC | 1 cut(s) | 686 |
| MalI | GATC | 3 cut(s) | 101, 125, 162 |
| MboI | GATC | 3 cut(s) | 99, 123, 160 |
| MboII | GAAGA | 4 cut(s) | 11, 403, 515, 616 |
| MflI | RGATCY | 1 cut(s) | 123 |
| MhlI | GDGCHC | 2 cut(s) | 549, 609 |
| MluCI | AATT | 5 cut(s) | 179, 237, 448, 586, 641 |
| MlyI | GAGTC | 1 cut(s) | 68 |
| MmeI | TCCRAC | 1 cut(s) | 138 |
| MseI | TTAA | 2 cut(s) | 236, 366 |
| MspI | CCGG | 3 cut(s) | 65, 334, 556 |
| MspR9I | CCNGG | 2 cut(s) | 244, 357 |
| Mva1269I | GAATGC | 1 cut(s) | 704 |
| MvaI | CCWGG | 2 cut(s) | 244, 357 |
| MvnI | CGCG | 1 cut(s) | 165 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 90, 104, 288 |
| NdeII | GATC | 3 cut(s) | 99, 123, 160 |
| NlaIII | CATG | 3 cut(s) | 106, 289, 613 |
| NlaIV | GGNNCC | 4 cut(s) | 125, 431, 606, 607 |
| NmuCI | GTSAC | 1 cut(s) | 686 |
| PciSI | GCTCTTC | 1 cut(s) | 528 |
| PctI | GAATGC | 1 cut(s) | 704 |
| PfeI | GAWTC | 1 cut(s) | 196 |
| Pfl23II | CGTACG | 1 cut(s) | 144 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 42 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 68 |
| PpsI | GAGTC | 1 cut(s) | 68 |
| PshAI | GACNNNNGTC | 1 cut(s) | 57 |
| Psp6I | CCWGG | 2 cut(s) | 242, 355 |
| PspGI | CCWGG | 2 cut(s) | 242, 355 |
| PspLI | CGTACG | 1 cut(s) | 144 |
| PspN4I | GGNNCC | 4 cut(s) | 125, 431, 606, 607 |
| PspOMI | GGGCCC | 1 cut(s) | 605 |
| PspPI | GGNCC | 2 cut(s) | 605, 606 |
| PsuI | RGATCY | 1 cut(s) | 123 |
| RsaI | GTAC | 2 cut(s) | 47, 146 |
| RsaNI | GTAC | 2 cut(s) | 46, 145 |
| SalI | GTCGAC | 2 cut(s) | 293, 482 |
| SapI | GCTCTTC | 1 cut(s) | 528 |
| SaqAI | TTAA | 2 cut(s) | 236, 366 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 3 cut(s) | 99, 123, 160 |
| Sau96I | GGNCC | 2 cut(s) | 605, 606 |
| SchI | GAGTC | 1 cut(s) | 68 |
| ScrFI | CCNGG | 2 cut(s) | 244, 357 |
| SduI | GDGCHC | 2 cut(s) | 549, 609 |
| SetI | ASST | 8 cut(s) | 113, 245, 440, 483, 519, 623, 639, 688 |
| SexAI | ACCWGGT | 1 cut(s) | 242 |
| SmlI | CTYRAG | 2 cut(s) | 560, 691 |
| SmoI | CTYRAG | 2 cut(s) | 560, 691 |
| Sse9I | AATT | 5 cut(s) | 179, 237, 448, 586, 641 |
| SsiI | CCGC | 2 cut(s) | 82, 280 |
| SspMI | CTAG | 1 cut(s) | 458 |
| StyD4I | CCNGG | 2 cut(s) | 242, 355 |
| TaaI | ACNGT | 1 cut(s) | 59 |
| TaiI | ACGT | 1 cut(s) | 483 |
| TaqI | TCGA | 3 cut(s) | 294, 483, 639 |
| TasI | AATT | 5 cut(s) | 179, 237, 448, 586, 641 |
| TfiI | GAWTC | 1 cut(s) | 196 |
| Tru1I | TTAA | 2 cut(s) | 236, 366 |
| Tru9I | TTAA | 2 cut(s) | 236, 366 |
| TscAI | CASTG | 1 cut(s) | 676 |
| TseFI | GTSAC | 1 cut(s) | 686 |
| TseI | GCWGC | 1 cut(s) | 95 |
| Tsp45I | GTSAC | 1 cut(s) | 686 |
| TspDTI | ATGAA | 1 cut(s) | 188 |
| TspRI | CASTG | 1 cut(s) | 676 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 42 |
| XapI | RAATTY | 1 cut(s) | 641 |
| XmiI | GTMKAC | 2 cut(s) | 294, 483 |
| XspI | CTAG | 1 cut(s) | 458 |
| ZraI | GACGTC | 1 cut(s) | 481 |