Rh4CG251500

CAP-Gly domain-containing linker protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0002436
Physical Location & Seq
Forward (+)
50142916 .. 50145388
2473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG251500.1

Sequence Viewer

Length: 309 bp
ATGGCCAACTCCGATGCCACCGCTTCTCTTCCTCCATCGGCTCCTCTCTCCGTCGCTCCTCCGCTCTCATCCACAACAAAGGAGAATCTGACTCCAGTTGCCTGCAAGATTGAGGAACTGACGGAATCCAGGTCTGAGCTGTTTGGCAGAATTCAAGGGTTGAAGAAGGATTTACAAACATGGAGGTCAAAGCTAGACTCGCAAGTTAAAGTCTACCGCGATGTAAGTGTTTGTGTAACTTCTACACACTTGAAAAAACATGCATTCAGATTCTCCTTCCTTATTCTCTGTGAGATGAGGTATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

102

Amino Acids

11.39

Weight (kDa)

9.15

Isoelectric Point (pI)

50.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 64
AccI GTMKAC 1 cut(s) 213
AccII CGCG 1 cut(s) 219
AciI CCGC 3 cut(s) 21, 62, 217
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 150
AgsI TTSAA 3 cut(s) 155, 163, 253
AjnI CCWGG 1 cut(s) 128
AluBI AGCT 2 cut(s) 139, 193
AluI AGCT 2 cut(s) 139, 193
AoxI GGCC 1 cut(s) 3
ApoI RAATTY 1 cut(s) 150
BalI TGGCCA 1 cut(s) 5
BccI CCATC 1 cut(s) 43
BciT130I CCWGG 1 cut(s) 130
BfaI CTAG 1 cut(s) 194
Bme1390I CCNGG 1 cut(s) 130
BmiI GGNNCC 1 cut(s) 42
BmrFI CCNGG 1 cut(s) 130
BmsI GCATC 1 cut(s) 4
BpmI CTGGAG 1 cut(s) 78
Bse1I ACTGG 1 cut(s) 95
BseBI CCWGG 1 cut(s) 130
BseGI GGATG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 126
BseNI ACTGG 1 cut(s) 95
BseRI GAGGAG 2 cut(s) 33, 48
Bsh1236I CGCG 1 cut(s) 219
BshFI GGCC 1 cut(s) 5
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 1 cut(s) 5
BspACI CCGC 3 cut(s) 21, 62, 217
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 127
BspFNI CGCG 1 cut(s) 219
BspLI GGNNCC 1 cut(s) 42
BsrBI CCGCTC 1 cut(s) 64
BsrI ACTGG 1 cut(s) 95
Bst2UI CCWGG 1 cut(s) 130
Bst6I CTCTTC 1 cut(s) 33
BstC8I GCNNGC 1 cut(s) 103
BstDEI CTNAG 1 cut(s) 135
BstF5I GGATG 1 cut(s) 68
BstFNI CGCG 1 cut(s) 219
BstMWI GCNNNNNNNGC 1 cut(s) 199
BstNI CCWGG 1 cut(s) 130
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 128
BstUI CGCG 1 cut(s) 219
BsuRI GGCC 1 cut(s) 5
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 1 cut(s) 68
Cac8I GCNNGC 1 cut(s) 103
CviAII CATG 2 cut(s) 180, 260
CviJI RGCY 4 cut(s) 5, 41, 139, 193
CviKI_1 RGCY 4 cut(s) 5, 41, 139, 193
DdeI CTNAG 1 cut(s) 135
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
EcoRI GAATTC 1 cut(s) 150
EcoRII CCWGG 1 cut(s) 128
EcoT22I ATGCAT 1 cut(s) 265
FaeI CATG 2 cut(s) 183, 263
FaiI YATR 2 cut(s) 181, 261
FatI CATG 2 cut(s) 179, 259
FblI GTMKAC 1 cut(s) 213
FokI GGATG 1 cut(s) 55
FspBI CTAG 1 cut(s) 194
GsuI CTGGAG 1 cut(s) 78
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 2 cut(s) 183, 263
HinfI GANTC 5 cut(s) 85, 91, 125, 197, 270
Hpy166II GTNNAC 1 cut(s) 214
Hpy188I TCNGA 4 cut(s) 13, 90, 136, 269
Hpy188III TCNNGA 1 cut(s) 306
Hpy8I GTNNAC 1 cut(s) 214
Hpy99I CGWCG 1 cut(s) 56
HpyAV CCTTC 2 cut(s) 160, 286
HpyCH4V TGCA 2 cut(s) 105, 263
HpyF10VI GCNNNNNNNGC 1 cut(s) 199
HpyF3I CTNAG 1 cut(s) 135
Hsp92II CATG 2 cut(s) 183, 263
LmnI GCTCC 2 cut(s) 46, 61
LpnPI CCDG 4 cut(s) 108, 115, 115, 142
LweI GCATC 1 cut(s) 4
MaeI CTAG 1 cut(s) 194
MaeIII GTNAC 1 cut(s) 235
MbiI CCGCTC 1 cut(s) 64
MboII GAAGA 2 cut(s) 20, 175
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 1 cut(s) 150
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 85, 191
MnlI CCTC 6 cut(s) 42, 54, 69, 106, 177, 291
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 265
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 207
Msp20I TGGCCA 1 cut(s) 5
MspR9I CCNGG 1 cut(s) 130
Mva1269I GAATGC 1 cut(s) 263
MvaI CCWGG 1 cut(s) 130
MvnI CGCG 1 cut(s) 219
MwoI GCNNNNNNNGC 1 cut(s) 199
NlaIII CATG 2 cut(s) 183, 263
NlaIV GGNNCC 1 cut(s) 42
NsiI ATGCAT 1 cut(s) 265
NspI RCATGY 1 cut(s) 263
PctI GAATGC 1 cut(s) 263
PfeI GAWTC 3 cut(s) 85, 125, 270
PleI GAGTC 2 cut(s) 85, 191
PpsI GAGTC 2 cut(s) 85, 191
Psp6I CCWGG 1 cut(s) 128
PspGI CCWGG 1 cut(s) 128
PspN4I GGNNCC 1 cut(s) 42
SaqAI TTAA 1 cut(s) 207
SchI GAGTC 2 cut(s) 85, 191
ScrFI CCNGG 1 cut(s) 130
SetI ASST 5 cut(s) 134, 141, 188, 195, 302
SfaNI GCATC 1 cut(s) 4
Sse9I AATT 1 cut(s) 150
SsiI CCGC 3 cut(s) 21, 62, 217
SspMI CTAG 1 cut(s) 194
StyD4I CCNGG 1 cut(s) 128
TasI AATT 1 cut(s) 150
TfiI GAWTC 3 cut(s) 85, 125, 270
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TspGWI ACGGA 2 cut(s) 40, 137
XapI RAATTY 1 cut(s) 150
XceI RCATGY 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 213
XspI CTAG 1 cut(s) 194
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.