threonine--tRNA ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17960 AT1G17960 |
| malus_domestica | MD15G1401700.v1.1 MD15G1402000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0444231 |
| rosa_laevigata | RLG00000005339 RLG00000005847 RLG00000008520 RLG00000020302 |
| rosa_multiflora | Rmu_sc0000016.1_g000006 Rmu_sc0000987.1_g000022 Rmu_sc0014698.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00219500 Rroxscaffold_5G00384800 |
| rosa_rugosa | Rorug03G0334500 Rorug07G0196800 |
| rosa_samantha | Rh1BG152700 Rh1CG027000 Rh1DG185100 Rh2BG464200 Rh4AG158400 Rh4BG163900 Rh4CG184100 Rh4DG152900 Rh4DG153000 Rh5CG279500 Rh6BG190300 Rh7CG027100 Rh7DG026600 Rh7DG335900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 815 |
| AccB1I | GGYRCC | 1 cut(s) | 970 |
| AciI | CCGC | 2 cut(s) | 992, 1072 |
| AclWI | GGATC | 4 cut(s) | 116, 636, 738, 1009 |
| AcoI | YGGCCR | 2 cut(s) | 113, 522 |
| AcsI | RAATTY | 4 cut(s) | 527, 884, 1047, 1346 |
| AcuI | CTGAAG | 1 cut(s) | 1317 |
| AdeI | CACNNNGTG | 1 cut(s) | 569 |
| AfaI | GTAC | 3 cut(s) | 597, 1128, 1154 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 284, 550, 879, 1195 |
| AgsI | TTSAA | 7 cut(s) | 107, 717, 779, 917, 934, 1351, 1357 |
| AjnI | CCWGG | 4 cut(s) | 279, 369, 872, 1074 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 641, 673 |
| AluBI | AGCT | 7 cut(s) | 94, 103, 400, 466, 764, 785, 907 |
| AluI | AGCT | 7 cut(s) | 94, 103, 400, 466, 764, 785, 907 |
| Alw21I | GWGCWC | 1 cut(s) | 565 |
| Alw26I | GTCTC | 2 cut(s) | 173, 819 |
| AlwI | GGATC | 4 cut(s) | 116, 636, 738, 1009 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 866 |
| Ama87I | CYCGRG | 2 cut(s) | 377, 1209 |
| ApeKI | GCWGC | 2 cut(s) | 91, 100 |
| ApoI | RAATTY | 4 cut(s) | 527, 884, 1047, 1346 |
| AseI | ATTAAT | 1 cut(s) | 1140 |
| AspLEI | GCGC | 1 cut(s) | 356 |
| AspS9I | GGNCC | 5 cut(s) | 276, 410, 842, 1053, 1291 |
| AsuHPI | GGTGA | 2 cut(s) | 299, 1282 |
| AvaI | CYCGRG | 2 cut(s) | 377, 1209 |
| AvaII | GGWCC | 2 cut(s) | 410, 1291 |
| BanI | GGYRCC | 1 cut(s) | 970 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 492, 524 |
| Bbv12I | GWGCWC | 1 cut(s) | 565 |
| BbvI | GCAGC | 2 cut(s) | 103, 112 |
| BccI | CCATC | 1 cut(s) | 168 |
| BceAI | ACGGC | 2 cut(s) | 315, 1287 |
| BciT130I | CCWGG | 4 cut(s) | 281, 371, 874, 1076 |
| BcoDI | GTCTC | 2 cut(s) | 173, 819 |
| BfaI | CTAG | 3 cut(s) | 351, 365, 788 |
| BfmI | CTRYAG | 1 cut(s) | 619 |
| BfoI | RGCGCY | 1 cut(s) | 357 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1060 |
| BisI | GCNGC | 2 cut(s) | 92, 101 |
| BlsI | GCNGC | 2 cut(s) | 93, 102 |
| Bme1390I | CCNGG | 4 cut(s) | 281, 371, 874, 1076 |
| Bme18I | GGWCC | 2 cut(s) | 410, 1291 |
| BmeT110I | CYCGRG | 2 cut(s) | 377, 1209 |
| BmgT120I | GGNCC | 5 cut(s) | 276, 410, 842, 1053, 1291 |
| BmiI | GGNNCC | 4 cut(s) | 278, 412, 972, 1293 |
| BmrFI | CCNGG | 4 cut(s) | 281, 371, 874, 1076 |
| BmsI | GCATC | 6 cut(s) | 383, 595, 859, 1195, 1204, 1335 |
| BoxI | GACNNNNGTC | 1 cut(s) | 581 |
| BpuEI | CTTGAG | 1 cut(s) | 116 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1325 |
| BsaI | GGTCTC | 1 cut(s) | 173 |
| BsaJI | CCNNGG | 4 cut(s) | 21, 279, 325, 806 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 284, 550, 879, 1195 |
| Bse1I | ACTGG | 3 cut(s) | 889, 1239, 1267 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1325 |
| BseBI | CCWGG | 4 cut(s) | 281, 371, 874, 1076 |
| BseDI | CCNNGG | 4 cut(s) | 21, 279, 325, 806 |
| BseGI | GGATG | 7 cut(s) | 16, 31, 41, 48, 398, 607, 1219 |
| BseJI | GATNNNNATC | 1 cut(s) | 1325 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 284, 550, 879, 1195 |
| BseMII | CTCAG | 1 cut(s) | 1297 |
| BseNI | ACTGG | 3 cut(s) | 889, 1239, 1267 |
| BseXI | GCAGC | 2 cut(s) | 103, 112 |
| BseYI | CCCAGC | 1 cut(s) | 466 |
| BsgI | GTGCAG | 1 cut(s) | 224 |
| BshNI | GGYRCC | 1 cut(s) | 970 |
| BsiHKAI | GWGCWC | 1 cut(s) | 565 |
| BsiHKCI | CYCGRG | 2 cut(s) | 377, 1209 |
| BsiSI | CCGG | 1 cut(s) | 923 |
| BslFI | GGGAC | 2 cut(s) | 278, 1053 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 284, 550, 879, 1195 |
| BsmAI | GTCTC | 2 cut(s) | 173, 819 |
| BsmBI | CGTCTC | 1 cut(s) | 819 |
| BsmFI | GGGAC | 2 cut(s) | 278, 1053 |
| BsmI | GAATGC | 1 cut(s) | 346 |
| Bso31I | GGTCTC | 1 cut(s) | 173 |
| BsoBI | CYCGRG | 2 cut(s) | 377, 1209 |
| Bsp1286I | GDGCHC | 1 cut(s) | 565 |
| Bsp1407I | TGTACA | 1 cut(s) | 595 |
| Bsp143I | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| Bsp19I | CCATGG | 1 cut(s) | 806 |
| BspACI | CCGC | 2 cut(s) | 992, 1072 |
| BspCNI | CTCAG | 1 cut(s) | 1296 |
| BspLI | GGNNCC | 4 cut(s) | 278, 412, 972, 1293 |
| BspPI | GGATC | 4 cut(s) | 116, 636, 738, 1009 |
| BspQI | GCTCTTC | 1 cut(s) | 74 |
| BspT107I | GGYRCC | 1 cut(s) | 970 |
| BspTNI | GGTCTC | 1 cut(s) | 173 |
| BsrGI | TGTACA | 1 cut(s) | 595 |
| BsrI | ACTGG | 3 cut(s) | 889, 1239, 1267 |
| BssECI | CCNNGG | 4 cut(s) | 21, 279, 325, 806 |
| BssMI | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| BssT1I | CCWWGG | 3 cut(s) | 21, 325, 806 |
| Bst2UI | CCWGG | 4 cut(s) | 281, 371, 874, 1076 |
| Bst4CI | ACNGT | 7 cut(s) | 152, 557, 591, 830, 862, 1276, 1363 |
| Bst6I | CTCTTC | 2 cut(s) | 74, 144 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 230 |
| BstAUI | TGTACA | 1 cut(s) | 595 |
| BstC8I | GCNNGC | 3 cut(s) | 398, 464, 928 |
| BstDEI | CTNAG | 5 cut(s) | 213, 298, 947, 1064, 1283 |
| BstDSI | CCRYGG | 1 cut(s) | 806 |
| BstF5I | GGATG | 7 cut(s) | 16, 31, 41, 48, 398, 607, 1219 |
| BstH2I | RGCGCY | 1 cut(s) | 357 |
| BstHHI | GCGC | 1 cut(s) | 356 |
| BstKTI | GATC | 5 cut(s) | 124, 631, 733, 775, 1004 |
| BstMAI | GTCTC | 2 cut(s) | 173, 819 |
| BstMBI | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 64, 97, 100, 230, 327, 1060, 1214 |
| BstNI | CCWGG | 4 cut(s) | 281, 371, 874, 1076 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 581 |
| BstSCI | CCNGG | 4 cut(s) | 279, 369, 872, 1074 |
| BstSFI | CTRYAG | 1 cut(s) | 619 |
| BstV1I | GCAGC | 2 cut(s) | 103, 112 |
| BstX2I | RGATCY | 1 cut(s) | 1001 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 520, 1030 |
| BstYI | RGATCY | 1 cut(s) | 1001 |
| BtgI | CCRYGG | 1 cut(s) | 806 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtsCI | GGATG | 7 cut(s) | 16, 31, 41, 48, 398, 607, 1219 |
| BtsI | GCAGTG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 4 cut(s) | 207, 562, 867, 896 |
| Cac8I | GCNNGC | 3 cut(s) | 398, 464, 928 |
| CaiI | CAGNNNCTG | 1 cut(s) | 866 |
| CfoI | GCGC | 1 cut(s) | 356 |
| Cfr13I | GGNCC | 5 cut(s) | 276, 410, 842, 1053, 1291 |
| Csp6I | GTAC | 3 cut(s) | 596, 1127, 1153 |
| CviAII | CATG | 4 cut(s) | 254, 268, 753, 807 |
| CviQI | GTAC | 3 cut(s) | 596, 1127, 1153 |
| DdeI | CTNAG | 5 cut(s) | 213, 298, 947, 1064, 1283 |
| DpnI | GATC | 5 cut(s) | 123, 630, 732, 774, 1003 |
| DpnII | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| DraIII | CACNNNGTG | 1 cut(s) | 569 |
| EaeI | YGGCCR | 2 cut(s) | 113, 522 |
| Eam1104I | CTCTTC | 2 cut(s) | 74, 144 |
| EarI | CTCTTC | 2 cut(s) | 74, 144 |
| Eco130I | CCWWGG | 3 cut(s) | 21, 325, 806 |
| Eco31I | GGTCTC | 1 cut(s) | 173 |
| Eco47I | GGWCC | 2 cut(s) | 410, 1291 |
| Eco57I | CTGAAG | 1 cut(s) | 1317 |
| Eco88I | CYCGRG | 2 cut(s) | 377, 1209 |
| EcoO109I | RGGNCCY | 2 cut(s) | 276, 1291 |
| EcoRI | GAATTC | 1 cut(s) | 1346 |
| EcoRII | CCWGG | 4 cut(s) | 279, 369, 872, 1074 |
| EcoT14I | CCWWGG | 3 cut(s) | 21, 325, 806 |
| ErhI | CCWWGG | 3 cut(s) | 21, 325, 806 |
| Esp3I | CGTCTC | 1 cut(s) | 819 |
| FaeI | CATG | 4 cut(s) | 257, 271, 756, 810 |
| FaqI | GGGAC | 2 cut(s) | 278, 1053 |
| FatI | CATG | 4 cut(s) | 253, 267, 752, 806 |
| FauI | CCCGC | 1 cut(s) | 1079 |
| Fnu4HI | GCNGC | 2 cut(s) | 92, 101 |
| FokI | GGATG | 7 cut(s) | 3, 28, 35, 38, 405, 614, 1226 |
| Fsp4HI | GCNGC | 2 cut(s) | 92, 101 |
| FspBI | CTAG | 3 cut(s) | 351, 365, 788 |
| GlaI | GCGC | 1 cut(s) | 355 |
| GluI | GCNGC | 2 cut(s) | 92, 101 |
| GsaI | CCCAGC | 1 cut(s) | 470 |
| HaeII | RGCGCY | 1 cut(s) | 357 |
| HapII | CCGG | 1 cut(s) | 923 |
| HhaI | GCGC | 1 cut(s) | 356 |
| Hin1II | CATG | 4 cut(s) | 257, 271, 756, 810 |
| Hin6I | GCGC | 1 cut(s) | 354 |
| HinP1I | GCGC | 1 cut(s) | 354 |
| HincII | GTYRAC | 1 cut(s) | 1366 |
| HindII | GTYRAC | 1 cut(s) | 1366 |
| HinfI | GANTC | 1 cut(s) | 446 |
| HpaII | CCGG | 1 cut(s) | 923 |
| HphI | GGTGA | 2 cut(s) | 299, 1282 |
| Hpy166II | GTNNAC | 3 cut(s) | 679, 696, 1366 |
| Hpy188I | TCNGA | 6 cut(s) | 311, 587, 868, 1099, 1286, 1376 |
| Hpy188III | TCNNGA | 7 cut(s) | 130, 157, 377, 776, 788, 1211, 1357 |
| Hpy8I | GTNNAC | 3 cut(s) | 679, 696, 1366 |
| Hpy99I | CGWCG | 2 cut(s) | 152, 591 |
| HpyAV | CCTTC | 8 cut(s) | 158, 162, 278, 425, 643, 815, 1066, 1292 |
| HpyCH4III | ACNGT | 7 cut(s) | 152, 557, 591, 830, 862, 1276, 1363 |
| HpyCH4V | TGCA | 6 cut(s) | 205, 396, 608, 833, 1217, 1259 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 64, 97, 100, 230, 327, 1060, 1214 |
| HpyF3I | CTNAG | 5 cut(s) | 213, 298, 947, 1064, 1283 |
| Hsp92II | CATG | 4 cut(s) | 257, 271, 756, 810 |
| HspAI | GCGC | 1 cut(s) | 354 |
| Kzo9I | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| LguI | GCTCTTC | 1 cut(s) | 74 |
| LmnI | GCTCC | 1 cut(s) | 560 |
| Lsp1109I | GCAGC | 2 cut(s) | 103, 112 |
| LweI | GCATC | 6 cut(s) | 383, 595, 859, 1195, 1204, 1335 |
| MaeI | CTAG | 3 cut(s) | 351, 365, 788 |
| MaeIII | GTNAC | 3 cut(s) | 537, 1175, 1270 |
| MalI | GATC | 5 cut(s) | 123, 630, 732, 774, 1003 |
| MboI | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| MboII | GAAGA | 4 cut(s) | 61, 131, 234, 653 |
| MflI | RGATCY | 1 cut(s) | 1001 |
| MhlI | GDGCHC | 1 cut(s) | 565 |
| MluCI | AATT | 5 cut(s) | 506, 527, 884, 1047, 1346 |
| MmeI | TCCRAC | 3 cut(s) | 610, 639, 1011 |
| MseI | TTAA | 3 cut(s) | 249, 473, 1140 |
| MslI | CAYNNNNRTG | 4 cut(s) | 200, 518, 546, 860 |
| MspI | CCGG | 1 cut(s) | 923 |
| MspR9I | CCNGG | 4 cut(s) | 281, 371, 874, 1076 |
| Mva1269I | GAATGC | 1 cut(s) | 346 |
| MvaI | CCWGG | 4 cut(s) | 281, 371, 874, 1076 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 64, 97, 100, 230, 327, 1060, 1214 |
| NcoI | CCATGG | 1 cut(s) | 806 |
| NdeII | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| NlaIII | CATG | 4 cut(s) | 257, 271, 756, 810 |
| NlaIV | GGNNCC | 4 cut(s) | 278, 412, 972, 1293 |
| NmeAIII | GCCGAG | 2 cut(s) | 91, 112 |
| NmuCI | GTSAC | 2 cut(s) | 1175, 1270 |
| PaeR7I | CTCGAG | 1 cut(s) | 377 |
| PciSI | GCTCTTC | 1 cut(s) | 74 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 716 |
| PctI | GAATGC | 1 cut(s) | 346 |
| PfeI | GAWTC | 1 cut(s) | 446 |
| PkrI | GCNGC | 2 cut(s) | 93, 102 |
| PpuMI | RGGWCCY | 1 cut(s) | 1291 |
| PshAI | GACNNNNGTC | 1 cut(s) | 581 |
| PshBI | ATTAAT | 1 cut(s) | 1140 |
| PsiI | TTATAA | 1 cut(s) | 815 |
| Psp5II | RGGWCCY | 1 cut(s) | 1291 |
| Psp6I | CCWGG | 4 cut(s) | 279, 369, 872, 1074 |
| PspFI | CCCAGC | 1 cut(s) | 466 |
| PspGI | CCWGG | 4 cut(s) | 279, 369, 872, 1074 |
| PspN4I | GGNNCC | 4 cut(s) | 278, 412, 972, 1293 |
| PspPI | GGNCC | 5 cut(s) | 276, 410, 842, 1053, 1291 |
| PspPPI | RGGWCCY | 1 cut(s) | 1291 |
| PstNI | CAGNNNCTG | 1 cut(s) | 866 |
| PsuI | RGATCY | 1 cut(s) | 1001 |
| RsaI | GTAC | 3 cut(s) | 597, 1128, 1154 |
| RsaNI | GTAC | 3 cut(s) | 596, 1127, 1153 |
| RseI | CAYNNNNRTG | 4 cut(s) | 200, 518, 546, 860 |
| SapI | GCTCTTC | 1 cut(s) | 74 |
| SaqAI | TTAA | 3 cut(s) | 249, 473, 1140 |
| SatI | GCNGC | 2 cut(s) | 92, 101 |
| Sau3AI | GATC | 5 cut(s) | 121, 628, 730, 772, 1001 |
| Sau96I | GGNCC | 5 cut(s) | 276, 410, 842, 1053, 1291 |
| ScrFI | CCNGG | 4 cut(s) | 281, 371, 874, 1076 |
| SduI | GDGCHC | 1 cut(s) | 565 |
| SfaNI | GCATC | 6 cut(s) | 383, 595, 859, 1195, 1204, 1335 |
| SfcI | CTRYAG | 1 cut(s) | 619 |
| Sfr274I | CTCGAG | 1 cut(s) | 377 |
| SinI | GGWCC | 2 cut(s) | 410, 1291 |
| SlaI | CTCGAG | 1 cut(s) | 377 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 200, 518, 546, 860 |
| SmlI | CTYRAG | 2 cut(s) | 95, 377 |
| SmoI | CTYRAG | 2 cut(s) | 95, 377 |
| Sse9I | AATT | 5 cut(s) | 506, 527, 884, 1047, 1346 |
| SsiI | CCGC | 2 cut(s) | 992, 1072 |
| SspI | AATATT | 1 cut(s) | 687 |
| SspMI | CTAG | 3 cut(s) | 351, 365, 788 |
| StyD4I | CCNGG | 4 cut(s) | 279, 369, 872, 1074 |
| StyI | CCWWGG | 3 cut(s) | 21, 325, 806 |
| TaaI | ACNGT | 7 cut(s) | 152, 557, 591, 830, 862, 1276, 1363 |
| TaqI | TCGA | 5 cut(s) | 72, 156, 378, 498, 1329 |
| TasI | AATT | 5 cut(s) | 506, 527, 884, 1047, 1346 |
| TatI | WGTACW | 1 cut(s) | 595 |
| TfiI | GAWTC | 1 cut(s) | 446 |
| Tru1I | TTAA | 3 cut(s) | 249, 473, 1140 |
| Tru9I | TTAA | 3 cut(s) | 249, 473, 1140 |
| TscAI | CASTG | 4 cut(s) | 207, 562, 867, 896 |
| TseFI | GTSAC | 2 cut(s) | 1175, 1270 |
| TseI | GCWGC | 2 cut(s) | 91, 100 |
| Tsp45I | GTSAC | 2 cut(s) | 1175, 1270 |
| TspDTI | ATGAA | 7 cut(s) | 284, 444, 655, 717, 1158, 1185, 1359 |
| TspGWI | ACGGA | 2 cut(s) | 34, 1178 |
| TspRI | CASTG | 4 cut(s) | 207, 562, 867, 896 |
| VpaK11BI | GGWCC | 2 cut(s) | 410, 1291 |
| VspI | ATTAAT | 1 cut(s) | 1140 |
| XapI | RAATTY | 4 cut(s) | 527, 884, 1047, 1346 |
| XbaI | TCTAGA | 1 cut(s) | 787 |
| XhoI | CTCGAG | 1 cut(s) | 377 |
| XspI | CTAG | 3 cut(s) | 351, 365, 788 |