Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Reverse (-)

39247106 .. 39251474

Gene Structure 4369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0334500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGTATATTAGTGCGGGTTTGGGCATAAATGCTCTGGTTCGAATAATCCGAGAGAGTTGGGTGGCAGGGCAGAAGGAGCCAAAAACGCATAGCTTAAACCGATCCCAAATCTGTTGGTTTTGGGATACCCACCTACCTACCTGCTGCCTGGTGCCCAAGGAGTTGCCGTTGACATGGTCGCTCAATGATCCTTGCTTCATCACCAAACCACCTGTAGCCCTAACCGCAATGGAAGCAGGTGGGTCTCCGGACCAGGAATCAATAGGGTCTGGGACAAAGAGGTCTACTGTATCATCAGGGAGTAGGCCTCGTAAACGCAAGGAATTTCTTTATAGGTTTGTAGACAGTGACAGACTCACTGCAAACCTTGAACAGTGGTTTGAATCTGTATCTAATAAATCAGCATTAAAGAAACCTGCCTTTAATGAGCCTTTTGAGTTGATAGAGCTTCAAAAGTTTGAGTATGCACTAGAAGGGATTTCATTTCAGCAGTTGATTAGGATGCCCAGTGCTGTTCATGCTTCAACTTCTGGTGCTGTGGAAGCAACTGCTTATCTTGCCATTGAAGATTTTTTACATGCCAGTGTTAAGGGCTTGTGGGAAGCATTCTGGAGTCCGGATGAGCCCATGCCTTTCTCTGTTGCTTGTTTGTACAATGAAAACTTAAAATTCTATCAAGCTGAGAATGCAGTTGCTGAGGGTCGGCTTGGAGGTCTTTGTGCTACTGGTATATTACTTACAAACCCTAGACATCCGCATGGGAAGTGGGATCATATTCTTGAGTTGGCTCTTTTAAGGCCTGATATTGGAGGCTTTGTTGTAAATGGTGATGGGCAGCCTTCACTCTCTGTTATTGGTGAGGCCCTTTTCTATGCTCTCCGAGTACTAATATCAAGAAGCTTGAGCCGAATGAAATACTGTCAGACTTCAAACTCTGTTTTTGTTCTTCTAGTTGATTCTCAGTATGGTGGGGTTGTAAAGGTTGAAGGAGATGTAAATAAGTTGGAGTTTGATGTTGATAATGTTTATGAATGTGCTGCTGAATGGATTGAAAATCATTCTACGGTTGCAGTCTCTTCAATTGACAGGATTTGGAACAAGCTTGGAAATGCCAACTGGGGAGATATTGGTGCTTTACAGATACTTTTTGCTACCTTCCACTGTATCACGCAATTTGCTGGATTTCCCAAGCACTCAATAGAGGATTTAGCTGCAGATCATGGTTCTCGTCTCCAAACAAGAAGAGCTGAGAGGCAGTTGGGGGATACTGAGGTGAATGGGAATGGTCTATTTCGGTTTCAGCAGCGTACGGTTTCCCCTGAAATTGTTGAAGTTCAGGATGATTCCATCAAAATTGAGTCTGAACAGTTAATGAAGCTAGAAGTAGGATCTGTATTGTGGTTGGAGGATTCTAACTGGCAAAAAGGTTACCAGATCAATGAAGTTATGATTAGCAGCGAACAGCCATATTACATTGCATTTCCAGTGGAAGATCCTCAGAAAAGTGTGTTTCTATATGTTGGCTCTCATCCTTCCCAGCTGGAGCCTGCATGGGAGGATATGAATATGTGGTATCAAGTTCAGAGGCAGACTAAAATATTGACTATTATGAAACAGAAAGGTCTATCTAGCAAGTATTTACCCCAGTTGAGTGCATCTGGCAGGATTATTCACCCTGGTCAGTGTCAGAGACCCAGCTCGGGCGGAAATTGTGATCACCCTTGGTGTGGCACCTCAATCCTCGTGACAAGCCCAGTTGGTGAAACAGTAGCTGATTTGATCAATCAGGGTAGATTTGGTGCGGAAGAGGCTATTAGGTGTTGCCATGATTGCTTATCTGCACTTTCAACTGCTGCTTCTGCAGGAATTCGACATGGAGACATCAGGCCAGAGAATGTGATACAAGTCAGGTCTTCGGCAAGACATCCCTTTTTTGTCCTCATTGGGTGGGGACGTGCTATTCTTGAAGATAGGGACCGACCTGCAATGAACCTTCATTTCTCTTCAACCTATGCTCTCCAGGAGGGAAAGTTATGCTCAGCTTCAGATGCTGAGAGCCTTGTTTATATGCTTTATATTTCCTGTGGTGGGGTTTTACCTGATCTTGATTCAGTTGAAGGGGCACTGCAGTGGAGAGAGACTTCTTGGTCTAGGAGACTAATTCAACAGAAGTTAGGCGATGCCTCAACTGTGTTAAAAGCATTTTCTGATTATGTTGATAGTCTATGTGGGACACCATATCTCATGGATTATGATATATGGCTAAGAAGGTTGAGGAGAAATATTAATGAGGAAAATGGAAAGGAAATTGATACATCAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006865 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009506 GO:0009507 GO:0009536 GO:0009853 GO:0009987 GO:0015075 GO:0015171 GO:0015318 GO:0015672 GO:0015711 GO:0015849 GO:0016020 GO:0016021 GO:0017077 GO:0019866 GO:0022857 GO:0030054 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0043094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0098588 GO:0098655 GO:0098656 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1903825 GO:1905039 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

774

Amino Acids

86.47

Weight (kDa)

5.51

Isoelectric Point (pI)

49.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	227
AasI	GACNNNNNNGTC	2 cut(s)	280, 2146
Acc36I	ACCTGC	4 cut(s)	149, 227, 424, 1990
AccB1I	GGYRCC	2 cut(s)	151, 1730
AccI	GTMKAC	2 cut(s)	284, 342
AccIII	TCCGGA	2 cut(s)	247, 616
AciI	CCGC	5 cut(s)	14, 225, 755, 1704, 1802
AclWI	GGATC	5 cut(s)	96, 182, 777, 1396, 1487
AcsI	RAATTY	3 cut(s)	323, 668, 1866
AcuI	CTGAAG	1 cut(s)	2028
AfaI	GTAC	3 cut(s)	653, 885, 1309
AfiI	CCNNNNNNNGG	4 cut(s)	806, 1700, 1727, 2088
AjiI	CACGTC	1 cut(s)	1955
AjnI	CCWGG	4 cut(s)	147, 252, 1675, 2019
AleI	CACNNNNGTG	1 cut(s)	2128
Alw26I	GTCTC	7 cut(s)	249, 1078, 1235, 1684, 1872, 2132, 2149
AlwI	GGATC	5 cut(s)	96, 182, 777, 1396, 1487
AlwNI	CAGNNNCTG	3 cut(s)	695, 1772, 2051
Ama87I	CYCGRG	1 cut(s)	1699
Aor13HI	TCCGGA	2 cut(s)	247, 616
AoxI	GGCC	4 cut(s)	305, 797, 861, 1886
ApeKI	GCWGC	7 cut(s)	144, 835, 1037, 1211, 1303, 1455, 1853
ApoI	RAATTY	3 cut(s)	323, 668, 1866
AseI	ATTAAT	1 cut(s)	2286
AspS9I	GGNCC	3 cut(s)	250, 862, 1975
AsuHPI	GGTGA	7 cut(s)	193, 839, 869, 1285, 1664, 1709, 1772
AsuII	TTCGAA	1 cut(s)	40
AvaI	CYCGRG	1 cut(s)	1699
AvaII	GGWCC	2 cut(s)	250, 1975
BaeGI	GKGCMC	2 cut(s)	156, 2125
BaeI	ACNNNNGTAYC	2 cut(s)	1257, 1290
BanI	GGYRCC	2 cut(s)	151, 1730
BanII	GRGCYC	1 cut(s)	627
BarI	GAAGNNNNNNTAC	2 cut(s)	558, 590
BauI	CACGAG	1 cut(s)	1742
BbsI	GAAGAC	1 cut(s)	1905
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	7 cut(s)	131, 847, 1024, 1198, 1315, 1467, 1840
BccI	CCATC	2 cut(s)	824, 1355
BceAI	ACGGC	1 cut(s)	151
BciT130I	CCWGG	4 cut(s)	149, 254, 1677, 2021
BciVI	GTATCC	2 cut(s)	118, 1258
BclI	TGATCA	2 cut(s)	1714, 1779
BcoDI	GTCTC	7 cut(s)	249, 1078, 1235, 1684, 1872, 2132, 2149
BfaI	CTAG	6 cut(s)	470, 747, 950, 1379, 1629, 2151
BfmI	CTRYAG	4 cut(s)	213, 1212, 1860, 2126
BfuAI	ACCTGC	4 cut(s)	149, 227, 424, 1990
BfuI	GTATCC	2 cut(s)	118, 1258
BisI	GCNGC	7 cut(s)	145, 836, 1038, 1212, 1304, 1456, 1854
BlpI	GCTNAGC	1 cut(s)	2038
BlsI	GCNGC	7 cut(s)	146, 837, 1039, 1213, 1305, 1457, 1855
BmcAI	AGTACT	1 cut(s)	885
Bme1390I	CCNGG	4 cut(s)	149, 254, 1677, 2021
Bme18I	GGWCC	2 cut(s)	250, 1975
BmeT110I	CYCGRG	1 cut(s)	1699
BmgBI	CACGTC	1 cut(s)	1955
BmgT120I	GGNCC	3 cut(s)	250, 862, 1975
BmiI	GGNNCC	5 cut(s)	78, 153, 1545, 1732, 1976
BmrFI	CCNGG	4 cut(s)	149, 254, 1677, 2021
BmrI	ACTGGG	4 cut(s)	501, 1126, 1639, 1748
BmsI	GCATC	4 cut(s)	492, 1664, 2038, 2170
BmuI	ACTGGG	4 cut(s)	501, 1126, 1639, 1748
BpiI	GAAGAC	1 cut(s)	1905
BplI	GAGNNNNNCTC	2 cut(s)	292, 324
BpmI	CTGGAG	3 cut(s)	631, 1562, 2003
Bpu10I	CCTNAGC	1 cut(s)	696
Bpu1102I	GCTNAGC	1 cut(s)	2038
Bpu14I	TTCGAA	1 cut(s)	40
BpuEI	CTTGAG	2 cut(s)	800, 922
BsaI	GGTCTC	2 cut(s)	249, 1684
BsaJI	CCNNGG	3 cut(s)	156, 1675, 1721
BsaWI	WCCGGW	2 cut(s)	247, 616
BsaXI	ACNNNNNCTCC	6 cut(s)	152, 182, 801, 831, 2015, 2045
Bsc4I	CCNNNNNNNGG	4 cut(s)	806, 1700, 1727, 2088
Bse1I	ACTGG	8 cut(s)	507, 582, 730, 1121, 1421, 1484, 1645, 1754
Bse3DI	GCAATG	3 cut(s)	234, 1473, 1992
BseAI	TCCGGA	2 cut(s)	247, 616
BseBI	CCWGG	4 cut(s)	149, 254, 1677, 2021
BseDI	CCNNGG	3 cut(s)	156, 1675, 1721
BseGI	GGATG	6 cut(s)	507, 625, 751, 1345, 1528, 1924
BseLI	CCNNNNNNNGG	4 cut(s)	806, 1700, 1727, 2088
BseMI	GCAATG	3 cut(s)	234, 1473, 1992
BseMII	CTCAG	8 cut(s)	672, 687, 974, 1239, 1260, 1511, 2043, 2052
BseNI	ACTGG	8 cut(s)	507, 582, 730, 1121, 1421, 1484, 1645, 1754
BseRI	GAGGAG	1 cut(s)	2290
BseSI	GKGCMC	2 cut(s)	156, 2125
BseXI	GCAGC	7 cut(s)	131, 847, 1024, 1198, 1315, 1467, 1840
BseYI	CCCAGC	2 cut(s)	1536, 1694
BsgI	GTGCAG	1 cut(s)	1824
BshFI	GGCC	4 cut(s)	307, 799, 863, 1888
BshNI	GGYRCC	2 cut(s)	151, 1730
BsiHKCI	CYCGRG	1 cut(s)	1699
BsiSI	CCGG	2 cut(s)	248, 617
BsiWI	CGTACG	1 cut(s)	1307
BslFI	GGGAC	4 cut(s)	286, 1965, 1988, 2245
BslI	CCNNNNNNNGG	4 cut(s)	806, 1700, 1727, 2088
BsmAI	GTCTC	7 cut(s)	249, 1078, 1235, 1684, 1872, 2132, 2149
BsmBI	CGTCTC	1 cut(s)	1235
BsmFI	GGGAC	4 cut(s)	286, 1965, 1988, 2245
BsmI	GAATGC	2 cut(s)	605, 691
BsnI	GGCC	4 cut(s)	307, 799, 863, 1888
Bso31I	GGTCTC	2 cut(s)	249, 1684
BsoBI	CYCGRG	1 cut(s)	1699
Bsp119I	TTCGAA	1 cut(s)	40
Bsp1286I	GDGCHC	3 cut(s)	156, 627, 2125
Bsp13I	TCCGGA	2 cut(s)	247, 616
Bsp1407I	TGTACA	1 cut(s)	651
Bsp1720I	GCTNAGC	1 cut(s)	2038
BspACI	CCGC	5 cut(s)	14, 225, 755, 1704, 1802
BspANI	GGCC	4 cut(s)	307, 799, 863, 1888
BspCNI	CTCAG	8 cut(s)	673, 688, 973, 1240, 1261, 1510, 2044, 2051
BspEI	TCCGGA	2 cut(s)	247, 616
BspLI	GGNNCC	5 cut(s)	78, 153, 1545, 1732, 1976
BspMAI	CTGCAG	3 cut(s)	1216, 1864, 2130
BspMI	ACCTGC	4 cut(s)	149, 227, 424, 1990
BspPI	GGATC	5 cut(s)	96, 182, 777, 1396, 1487
BspQI	GCTCTTC	1 cut(s)	1237
BspT104I	TTCGAA	1 cut(s)	40
BspT107I	GGYRCC	2 cut(s)	151, 1730
BspTNI	GGTCTC	2 cut(s)	249, 1684
BsrDI	GCAATG	3 cut(s)	234, 1473, 1992
BsrGI	TGTACA	1 cut(s)	651
BsrI	ACTGG	8 cut(s)	507, 582, 730, 1121, 1421, 1484, 1645, 1754
BssECI	CCNNGG	3 cut(s)	156, 1675, 1721
BssSI	CACGAG	1 cut(s)	1742
BssT1I	CCWWGG	2 cut(s)	156, 1721
Bst2BI	CACGAG	1 cut(s)	1742
Bst2UI	CCWGG	4 cut(s)	149, 254, 1677, 2021
Bst6I	CTCTTC	4 cut(s)	1081, 1237, 1800, 2008
BstAUI	TGTACA	1 cut(s)	651
BstBI	TTCGAA	1 cut(s)	40
BstC8I	GCNNGC	1 cut(s)	1548
BstDEI	CTNAG	9 cut(s)	681, 696, 960, 1248, 1269, 1497, 2038, 2052, 2264
BstEII	GGTNACC	1 cut(s)	1427
BstF5I	GGATG	6 cut(s)	507, 625, 751, 1345, 1528, 1924
BstMAI	GTCTC	7 cut(s)	249, 1078, 1235, 1684, 1872, 2132, 2149
BstNI	CCWGG	4 cut(s)	149, 254, 1677, 2021
BstNSI	RCATGY	1 cut(s)	581
BstPI	GGTNACC	1 cut(s)	1427
BstSCI	CCNGG	4 cut(s)	147, 252, 1675, 2019
BstSFI	CTRYAG	4 cut(s)	213, 1212, 1860, 2126
BstSLI	GKGCMC	2 cut(s)	156, 2125
BstV1I	GCAGC	7 cut(s)	131, 847, 1024, 1198, 1315, 1467, 1840
BstV2I	GAAGAC	1 cut(s)	1905
BstX2I	RGATCY	2 cut(s)	1388, 1492
BstYI	RGATCY	2 cut(s)	1388, 1492
BsuI	GTATCC	2 cut(s)	118, 1258
BsuRI	GGCC	4 cut(s)	307, 799, 863, 1888
BtgZI	GCGATG	1 cut(s)	2193
BtrI	CACGTC	1 cut(s)	1955
BtsCI	GGATG	6 cut(s)	507, 625, 751, 1345, 1528, 1924
BtsI	GCAGTG	3 cut(s)	357, 2123, 2135
BveI	ACCTGC	4 cut(s)	149, 227, 424, 1990
Cac8I	GCNNGC	1 cut(s)	1548
CaiI	CAGNNNCTG	3 cut(s)	695, 1772, 2051
Cfr13I	GGNCC	3 cut(s)	250, 862, 1975
Csp6I	GTAC	3 cut(s)	652, 884, 1308
CviQI	GTAC	3 cut(s)	652, 884, 1308
DdeI	CTNAG	9 cut(s)	681, 696, 960, 1248, 1269, 1497, 2038, 2052, 2264
DrdI	GACNNNNNNGTC	2 cut(s)	280, 2146
DseDI	GACNNNNNNGTC	2 cut(s)	280, 2146
Eam1104I	CTCTTC	4 cut(s)	1081, 1237, 1800, 2008
EarI	CTCTTC	4 cut(s)	1081, 1237, 1800, 2008
EciI	GGCGGA	1 cut(s)	1719
Eco130I	CCWWGG	2 cut(s)	156, 1721
Eco147I	AGGCCT	2 cut(s)	307, 799
Eco24I	GRGCYC	1 cut(s)	627
Eco31I	GGTCTC	2 cut(s)	249, 1684
Eco47I	GGWCC	2 cut(s)	250, 1975
Eco57I	CTGAAG	1 cut(s)	2028
Eco88I	CYCGRG	1 cut(s)	1699
Eco91I	GGTNACC	1 cut(s)	1427
EcoO109I	RGGNCCY	1 cut(s)	862
EcoO65I	GGTNACC	1 cut(s)	1427
EcoRI	GAATTC	1 cut(s)	1866
EcoRII	CCWGG	4 cut(s)	147, 252, 1675, 2019
EcoT14I	CCWWGG	2 cut(s)	156, 1721
EcoT38I	GRGCYC	1 cut(s)	627
ErhI	CCWWGG	2 cut(s)	156, 1721
Esp3I	CGTCTC	1 cut(s)	1235
FaqI	GGGAC	4 cut(s)	286, 1965, 1988, 2245
FauI	CCCGC	1 cut(s)	7
FbaI	TGATCA	2 cut(s)	1714, 1779
FblI	GTMKAC	2 cut(s)	284, 342
Fnu4HI	GCNGC	7 cut(s)	145, 836, 1038, 1212, 1304, 1456, 1854
FokI	GGATG	6 cut(s)	514, 632, 738, 1352, 1515, 1911
FriOI	GRGCYC	1 cut(s)	627
Fsp4HI	GCNGC	7 cut(s)	145, 836, 1038, 1212, 1304, 1456, 1854
FspBI	CTAG	6 cut(s)	470, 747, 950, 1379, 1629, 2151
GluI	GCNGC	7 cut(s)	145, 836, 1038, 1212, 1304, 1456, 1854
GsaI	CCCAGC	2 cut(s)	1540, 1698
GsuI	CTGGAG	3 cut(s)	631, 1562, 2003
HaeIII	GGCC	4 cut(s)	307, 799, 863, 1888
HapII	CCGG	2 cut(s)	248, 617
HincII	GTYRAC	1 cut(s)	171
HindII	GTYRAC	1 cut(s)	171
HindIII	AAGCTT	2 cut(s)	898, 1100
HinfI	GANTC	9 cut(s)	257, 354, 383, 613, 956, 1343, 1358, 1409, 2108
HpaII	CCGG	2 cut(s)	248, 617
HphI	GGTGA	7 cut(s)	193, 839, 869, 1285, 1664, 1709, 1772
Hpy166II	GTNNAC	4 cut(s)	171, 285, 314, 343
Hpy188I	TCNGA	9 cut(s)	50, 881, 924, 1363, 1500, 1584, 1689, 2047, 2209
Hpy188III	TCNNGA	9 cut(s)	248, 610, 617, 779, 894, 1337, 1744, 1964, 2105
Hpy8I	GTNNAC	4 cut(s)	171, 285, 314, 343
HpyAV	CCTTC	9 cut(s)	67, 467, 849, 980, 1165, 1542, 2003, 2111, 2262
HpyCH4IV	ACGT	1 cut(s)	1954
HpyF3I	CTNAG	9 cut(s)	681, 696, 960, 1248, 1269, 1497, 2038, 2052, 2264
HpySE526I	ACGT	1 cut(s)	1954
Kpn2I	TCCGGA	2 cut(s)	247, 616
Ksp22I	TGATCA	2 cut(s)	1714, 1779
LguI	GCTCTTC	1 cut(s)	1237
LmnI	GCTCC	2 cut(s)	76, 1543
Lsp1109I	GCAGC	7 cut(s)	131, 847, 1024, 1198, 1315, 1467, 1840
LweI	GCATC	4 cut(s)	492, 1664, 2038, 2170
MaeI	CTAG	6 cut(s)	470, 747, 950, 1379, 1629, 2151
MaeII	ACGT	1 cut(s)	1954
MaeIII	GTNAC	3 cut(s)	347, 1427, 1744
MboII	GAAGA	9 cut(s)	578, 938, 1068, 1254, 1502, 1817, 1905, 1979, 1995
MfeI	CAATTG	1 cut(s)	1080
MflI	RGATCY	2 cut(s)	1388, 1492
MhlI	GDGCHC	3 cut(s)	156, 627, 2125
MlyI	GAGTC	3 cut(s)	348, 622, 1367
MmeI	TCCRAC	2 cut(s)	984, 1383
MroI	TCCGGA	2 cut(s)	247, 616
MseI	TTAA	9 cut(s)	95, 407, 423, 588, 665, 794, 1370, 2195, 2286
MslI	CAYNNNNRTG	3 cut(s)	582, 756, 2128
MspA1I	CMGCKG	1 cut(s)	1540
MspI	CCGG	2 cut(s)	248, 617
MspR9I	CCNGG	4 cut(s)	149, 254, 1677, 2021
MunI	CAATTG	1 cut(s)	1080
Mva1269I	GAATGC	2 cut(s)	605, 691
MvaI	CCWGG	4 cut(s)	149, 254, 1677, 2021
NlaIV	GGNNCC	5 cut(s)	78, 153, 1545, 1732, 1976
NmuCI	GTSAC	2 cut(s)	347, 1744
NspI	RCATGY	1 cut(s)	581
NspV	TTCGAA	1 cut(s)	40
OliI	CACNNNNGTG	1 cut(s)	2128
PaqCI	CACCTGC	1 cut(s)	227
PceI	AGGCCT	2 cut(s)	307, 799
PciSI	GCTCTTC	1 cut(s)	1237
PcsI	WCGNNNNNNNCGW	1 cut(s)	46
PctI	GAATGC	2 cut(s)	605, 691
PfeI	GAWTC	6 cut(s)	257, 383, 956, 1343, 1409, 2108
Pfl23II	CGTACG	1 cut(s)	1307
PflFI	GACNNNGTC	1 cut(s)	175
PfoI	TCCNGGA	1 cut(s)	2019
PkrI	GCNGC	7 cut(s)	146, 837, 1039, 1213, 1305, 1457, 1855
PleI	GAGTC	3 cut(s)	348, 621, 1366
PpsI	GAGTC	3 cut(s)	348, 621, 1366
PshBI	ATTAAT	1 cut(s)	2286
Psp6I	CCWGG	4 cut(s)	147, 252, 1675, 2019
PspEI	GGTNACC	1 cut(s)	1427
PspFI	CCCAGC	2 cut(s)	1536, 1694
PspGI	CCWGG	4 cut(s)	147, 252, 1675, 2019
PspLI	CGTACG	1 cut(s)	1307
PspN4I	GGNNCC	5 cut(s)	78, 153, 1545, 1732, 1976
PspPI	GGNCC	3 cut(s)	250, 862, 1975
PstI	CTGCAG	3 cut(s)	1216, 1864, 2130
PstNI	CAGNNNCTG	3 cut(s)	695, 1772, 2051
PsuI	RGATCY	2 cut(s)	1388, 1492
PsyI	GACNNNGTC	1 cut(s)	175
PvuII	CAGCTG	1 cut(s)	1540
RsaI	GTAC	3 cut(s)	653, 885, 1309
RsaNI	GTAC	3 cut(s)	652, 884, 1308
RseI	CAYNNNNRTG	3 cut(s)	582, 756, 2128
SapI	GCTCTTC	1 cut(s)	1237
SaqAI	TTAA	9 cut(s)	95, 407, 423, 588, 665, 794, 1370, 2195, 2286
SatI	GCNGC	7 cut(s)	145, 836, 1038, 1212, 1304, 1456, 1854
Sau96I	GGNCC	3 cut(s)	250, 862, 1975
ScaI	AGTACT	1 cut(s)	885
SchI	GAGTC	3 cut(s)	348, 622, 1367
ScrFI	CCNGG	4 cut(s)	149, 254, 1677, 2021
SduI	GDGCHC	3 cut(s)	156, 627, 2125
SfaNI	GCATC	4 cut(s)	492, 1664, 2038, 2170
SfcI	CTRYAG	4 cut(s)	213, 1212, 1860, 2126
SfuI	TTCGAA	1 cut(s)	40
SinI	GGWCC	2 cut(s)	250, 1975
SmiMI	CAYNNNNRTG	3 cut(s)	582, 756, 2128
SmlI	CTYRAG	2 cut(s)	779, 901
SmoI	CTYRAG	2 cut(s)	779, 901
SseBI	AGGCCT	2 cut(s)	307, 799
SsiI	CCGC	5 cut(s)	14, 225, 755, 1704, 1802
SspI	AATATT	2 cut(s)	1599, 2284
SspMI	CTAG	6 cut(s)	470, 747, 950, 1379, 1629, 2151
StuI	AGGCCT	2 cut(s)	307, 799
StyD4I	CCNGG	4 cut(s)	147, 252, 1675, 2019
StyI	CCWWGG	2 cut(s)	156, 1721
TaiI	ACGT	1 cut(s)	1957
TaqI	TCGA	2 cut(s)	40, 1870
TaqII	GACCGA	1 cut(s)	1992
TatI	WGTACW	2 cut(s)	651, 883
TfiI	GAWTC	6 cut(s)	257, 383, 956, 1343, 1409, 2108
Tru1I	TTAA	9 cut(s)	95, 407, 423, 588, 665, 794, 1370, 2195, 2286
Tru9I	TTAA	9 cut(s)	95, 407, 423, 588, 665, 794, 1370, 2195, 2286
TseFI	GTSAC	2 cut(s)	347, 1744
TseI	GCWGC	7 cut(s)	144, 835, 1037, 1211, 1303, 1455, 1853
Tsp45I	GTSAC	2 cut(s)	347, 1744
Tth111I	GACNNNGTC	1 cut(s)	175
VpaK11BI	GGWCC	2 cut(s)	250, 1975
VspI	ATTAAT	1 cut(s)	2286
XapI	RAATTY	3 cut(s)	323, 668, 1866
XceI	RCATGY	1 cut(s)	581
XmiI	GTMKAC	2 cut(s)	284, 342
XspI	CTAG	6 cut(s)	470, 747, 950, 1379, 1629, 2151
ZrmI	AGTACT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.