Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

5614291 .. 5659587

Gene Structure 45297 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG032900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGAGAAGGATCGGGGAATGGAGGGATGAAGAAGGTGGAGCCGATGAGAATGCCGCAAGGATAAAGAGGACACTCGATTGCTTGTGTAGCTGTTTCATGCTTCTGCACTATGTCTCACGTGTGATTTCTCTTTTGTCTTCTCCGGTTCAAAATCAGAAGATAGAGCCATGCTACGACTATGGTCGAGAATACCATGTTCTTCTCCTTTGGAAACGACTGGTCGTCCGCCATGCTCTGGTGATACAAGAAAGTTCTAGTAATCATGCATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTTGATTATGTCTCTCGCGAGAAAAGGCCTTATCATTCCCATCATTTCAAGGCTGGAGCTATCAATGTTCTTCTTCGGGTATCCGGTGTGATAAGTAATTCTCCCTTCATATTAGGGCTTGACTGTGACACGAATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCATTTGTTCAATTCCCTCAGAGATTCCACAACATCAGCAAGAAAGACATCTACGACAGTCAGTATAGATCGATCTTTAAGGTGCTATGGCAAGGTTTGGATGGACTTCAAGGGCCGGCCATGTGCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCTTAAAGGCGGGTCATAAGGATCTTATGGAACTTAGACAATCTGTTGGTCCATCAAATGAGTTCATAACATCCCTGCTTGGAAATTACAATCCTAATATGAAAATGGCACAGCTAGCTGAGACCCAACAACTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGCGGAAGATTTTTTGACTACGTTGGCTAGCTTGCATTGTAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGAGGCTTCACTAATTTAAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCAGCGGTGATTGATATTGCCATCTCCAAATACTGCCCTCTTATATATGACCTTTCTCAAATATCTTTCCTTCAACGTATGTGCAATGTATTGTTCGCAATTTCGCCTATTTGCCAGTTCTTCTCACTCTGGTGCCTTGCAACTATACCTCAGCTTTGCCTAGTCAACGGCATTTCCCTGTACCCTGAGGTTTCAAATTCGTATTTTTGGATATTTTCTTTTGTATTCTTGTCATCTGTTTCGAGACATTTATACGAGGTCTTGACAACTGGCGCATCGTTACAACATTGGGTCTACGAGCAAAGAATATGGATGATGAACGCAGTTACATCTCACTTATATGGTACTCTTGATGCTTTTATAAAGAAATTTGGCTTGAGGGAAGCAAGTTTCTCTATATCAAATAAAGTTGATGACGTTGAGCAACTCAAGCGTTACAACGCGGGGGTATTTGATTTCCAAACCTCAGCACTTTTTCTTGTTCCATTAGCATCATTGGTTATCTTGAACATGGCCTCCCTTTTTGTGGGCATTGCCAGAGTGATCTTTCTGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCGGTGGTCGTCAATTACCCTATTATAGAAGGAATGCTATTAAGGAAAGACAGTGGTCGCATTCCACCATCAGTCACCCTATTGTCTGCTACAGCTTCACTCATTTTCTGTGTTTTGGGTTCAATTATTTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

582

Amino Acids

65.93

Weight (kDa)

8.04

Isoelectric Point (pI)

42.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	77 - 226	8.8e-43	Cellulose synthase
Cellulose_synt	PF03552	233 - 576	2.9e-53	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1376
AasI	GACNNNNNNGTC	1 cut(s)	992
AccB1I	GGYRCC	2 cut(s)	830, 1146
AccB7I	CCANNNNNTGG	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	1308
AccII	CGCG	3 cut(s)	318, 866, 1457
AciI	CCGC	8 cut(s)	54, 226, 630, 683, 875, 1019, 1457, 1613
AclWI	GGATC	4 cut(s)	17, 437, 476, 702
AcoI	YGGCCR	1 cut(s)	621
AcsI	RAATTY	3 cut(s)	922, 1210, 1382
AcvI	CACGTG	1 cut(s)	119
AfaI	GTAC	4 cut(s)	634, 817, 1196, 1360
AfiI	CCNNNNNNNGG	2 cut(s)	235, 1540
AflIII	ACRYGT	2 cut(s)	118, 864
AgsI	TTSAA	9 cut(s)	149, 272, 349, 515, 614, 1088, 1209, 1522, 1734
AhdI	GACNNNNNGTC	1 cut(s)	221
AleI	CACNNNNGTG	1 cut(s)	1144
AloI	GAACNNNNNNTCC	2 cut(s)	1514, 1546
AluBI	AGCT	9 cut(s)	90, 359, 455, 490, 787, 791, 903, 1168, 1706
AluI	AGCT	9 cut(s)	90, 359, 455, 490, 787, 791, 903, 1168, 1706
Alw26I	GTCTC	4 cut(s)	118, 316, 788, 1252
AlwI	GGATC	4 cut(s)	17, 437, 476, 702
AoxI	GGCC	5 cut(s)	326, 617, 621, 947, 1527
ApoI	RAATTY	3 cut(s)	922, 1210, 1382
AspLEI	GCGC	1 cut(s)	1289
AspS9I	GGNCC	3 cut(s)	617, 722, 994
AsuHPI	GGTGA	5 cut(s)	250, 486, 854, 1033, 1678
AsuNHI	GCTAGC	3 cut(s)	502, 787, 899
AvaII	GGWCC	2 cut(s)	722, 994
AxyI	CCTNAGG	1 cut(s)	1200
BanI	GGYRCC	2 cut(s)	830, 1146
BbrPI	CACGTG	1 cut(s)	119
BbsI	GAAGAC	2 cut(s)	129, 1588
BbvCI	CCTCAGC	2 cut(s)	1164, 1480
BccI	CCATC	7 cut(s)	348, 599, 733, 821, 1002, 1043, 1687
BceAI	ACGGC	1 cut(s)	1198
BcgI	CGANNNNNNTGC	2 cut(s)	32, 66
BciVI	GTATCC	1 cut(s)	391
BcoDI	GTCTC	4 cut(s)	118, 316, 788, 1252
BfaI	CTAG	6 cut(s)	255, 503, 788, 806, 900, 1175
BfmI	CTRYAG	2 cut(s)	870, 1701
BfuI	GTATCC	1 cut(s)	391
BisI	GCNGC	1 cut(s)	54
BlsI	GCNGC	1 cut(s)	55
Bme18I	GGWCC	2 cut(s)	722, 994
BmeRI	GACNNNNNGTC	1 cut(s)	221
BmgT120I	GGNCC	3 cut(s)	617, 722, 994
BmiI	GGNNCC	3 cut(s)	40, 832, 1148
BmsI	GCATC	3 cut(s)	1298, 1357, 1514
BmtI	GCTAGC	3 cut(s)	506, 791, 903
BoxI	GACNNNNGTC	2 cut(s)	180, 1665
BpiI	GAAGAC	2 cut(s)	129, 1588
BpmI	CTGGAG	1 cut(s)	375
Bpu10I	CCTNAGC	2 cut(s)	1164, 1480
BpuEI	CTTGAG	2 cut(s)	1411, 1427
Bsa29I	ATCGAT	1 cut(s)	575
BsaAI	YACGTR	1 cut(s)	119
BsaI	GGTCTC	1 cut(s)	788
BsaJI	CCNNGG	2 cut(s)	944, 997
BsaWI	WCCGGW	2 cut(s)	142, 383
BsaXI	ACNNNNNCTCC	4 cut(s)	1514, 1544, 1568, 1598
Bsc4I	CCNNNNNNNGG	2 cut(s)	235, 1540
Bse118I	RCCGGY	1 cut(s)	619
Bse1I	ACTGG	4 cut(s)	222, 640, 1129, 1288
Bse21I	CCTNAGG	1 cut(s)	1200
Bse3DI	GCAATG	4 cut(s)	445, 471, 1105, 1545
BseCI	ATCGAT	1 cut(s)	575
BseDI	CCNNGG	2 cut(s)	944, 997
BseGI	GGATG	4 cut(s)	31, 610, 743, 1332
BseLI	CCNNNNNNNGG	2 cut(s)	235, 1540
BseMI	GCAATG	4 cut(s)	445, 471, 1105, 1545
BseMII	CTCAG	6 cut(s)	536, 783, 965, 1178, 1191, 1494
BseNI	ACTGG	4 cut(s)	222, 640, 1129, 1288
BsgI	GTGCAG	1 cut(s)	89
Bsh1236I	CGCG	3 cut(s)	318, 866, 1457
BshFI	GGCC	5 cut(s)	328, 619, 623, 949, 1529
BshNI	GGYRCC	2 cut(s)	830, 1146
BshVI	ATCGAT	1 cut(s)	575
BsiSI	CCGG	3 cut(s)	143, 384, 620
BslFI	GGGAC	1 cut(s)	1015
BslI	CCNNNNNNNGG	2 cut(s)	235, 1540
BsmAI	GTCTC	4 cut(s)	118, 316, 788, 1252
BsmFI	GGGAC	1 cut(s)	1015
BsmI	GAATGC	3 cut(s)	55, 1650, 1671
BsnI	GGCC	5 cut(s)	328, 619, 623, 949, 1529
Bso31I	GGTCTC	1 cut(s)	788
Bsp143I	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
Bsp68I	TCGCGA	1 cut(s)	318
BspACI	CCGC	8 cut(s)	54, 226, 630, 683, 875, 1019, 1457, 1613
BspANI	GGCC	5 cut(s)	328, 619, 623, 949, 1529
BspCNI	CTCAG	6 cut(s)	535, 784, 964, 1177, 1192, 1493
BspDI	ATCGAT	1 cut(s)	575
BspFNI	CGCG	3 cut(s)	318, 866, 1457
BspLI	GGNNCC	3 cut(s)	40, 832, 1148
BspOI	GCTAGC	3 cut(s)	506, 791, 903
BspPI	GGATC	4 cut(s)	17, 437, 476, 702
BspT107I	GGYRCC	2 cut(s)	830, 1146
BspTNI	GGTCTC	1 cut(s)	788
BsrDI	GCAATG	4 cut(s)	445, 471, 1105, 1545
BsrFI	RCCGGY	1 cut(s)	619
BsrI	ACTGG	4 cut(s)	222, 640, 1129, 1288
BssAI	RCCGGY	1 cut(s)	619
BssECI	CCNNGG	2 cut(s)	944, 997
BssMI	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
BssT1I	CCWWGG	2 cut(s)	944, 997
Bst4CI	ACNGT	3 cut(s)	425, 563, 1664
Bst6I	CTCTTC	1 cut(s)	840
BstBAI	YACGTR	1 cut(s)	119
BstC8I	GCNNGC	6 cut(s)	462, 504, 621, 789, 901, 905
BstDEI	CTNAG	7 cut(s)	522, 707, 792, 951, 1164, 1200, 1480
BstF5I	GGATG	4 cut(s)	31, 610, 743, 1332
BstFNI	CGCG	3 cut(s)	318, 866, 1457
BstHHI	GCGC	1 cut(s)	1289
BstKTI	GATC	7 cut(s)	12, 445, 484, 575, 579, 697, 1560
BstMAI	GTCTC	4 cut(s)	118, 316, 788, 1252
BstMBI	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
BstMWI	GCNNNNNNNGC	6 cut(s)	87, 461, 636, 788, 872, 1444
BstNSI	RCATGY	1 cut(s)	295
BstPAI	GACNNNNGTC	2 cut(s)	180, 1665
BstSFI	CTRYAG	2 cut(s)	870, 1701
BstUI	CGCG	3 cut(s)	318, 866, 1457
BstV2I	GAAGAC	2 cut(s)	129, 1588
BstX2I	RGATCY	1 cut(s)	694
BstYI	RGATCY	1 cut(s)	694
Bsu15I	ATCGAT	1 cut(s)	575
Bsu36I	CCTNAGG	1 cut(s)	1200
BsuI	GTATCC	1 cut(s)	391
BsuRI	GGCC	5 cut(s)	328, 619, 623, 949, 1529
BsuTUI	ATCGAT	1 cut(s)	575
BtsCI	GGATG	4 cut(s)	31, 610, 743, 1332
BtsIMutI	CAGTG	2 cut(s)	933, 1669
BtuMI	TCGCGA	1 cut(s)	318
Cac8I	GCNNGC	6 cut(s)	462, 504, 621, 789, 901, 905
CfoI	GCGC	1 cut(s)	1289
Cfr10I	RCCGGY	1 cut(s)	619
Cfr13I	GGNCC	3 cut(s)	617, 722, 994
ClaI	ATCGAT	1 cut(s)	575
CseI	GACGC	1 cut(s)	855
Csp6I	GTAC	4 cut(s)	633, 816, 1195, 1359
CviAII	CATG	9 cut(s)	97, 168, 194, 230, 263, 292, 625, 1525, 1744
CviQI	GTAC	4 cut(s)	633, 816, 1195, 1359
DdeI	CTNAG	7 cut(s)	522, 707, 792, 951, 1164, 1200, 1480
DpnI	GATC	7 cut(s)	11, 444, 483, 574, 578, 696, 1559
DpnII	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
DraI	TTTAAA	1 cut(s)	981
DrdI	GACNNNNNNGTC	1 cut(s)	992
DriI	GACNNNNNGTC	1 cut(s)	221
DseDI	GACNNNNNNGTC	1 cut(s)	992
EaeI	YGGCCR	1 cut(s)	621
Eam1104I	CTCTTC	1 cut(s)	840
Eam1105I	GACNNNNNGTC	1 cut(s)	221
EarI	CTCTTC	1 cut(s)	840
EciI	GGCGGA	1 cut(s)	215
Eco130I	CCWWGG	2 cut(s)	944, 997
Eco147I	AGGCCT	2 cut(s)	328, 949
Eco31I	GGTCTC	1 cut(s)	788
Eco47I	GGWCC	2 cut(s)	722, 994
Eco72I	CACGTG	1 cut(s)	119
Eco81I	CCTNAGG	1 cut(s)	1200
EcoRI	GAATTC	1 cut(s)	922
EcoT14I	CCWWGG	2 cut(s)	944, 997
EcoT22I	ATGCAT	1 cut(s)	268
ErhI	CCWWGG	2 cut(s)	944, 997
FaeI	CATG	9 cut(s)	100, 171, 197, 233, 266, 295, 628, 1528, 1747
FaqI	GGGAC	1 cut(s)	1015
FatI	CATG	9 cut(s)	96, 167, 193, 229, 262, 291, 624, 1524, 1743
FauI	CCCGC	2 cut(s)	676, 1450
FblI	GTMKAC	1 cut(s)	1308
Fnu4HI	GCNGC	1 cut(s)	54
FokI	GGATG	4 cut(s)	38, 617, 730, 1339
FseI	GGCCGGCC	1 cut(s)	623
Fsp4HI	GCNGC	1 cut(s)	54
FspBI	CTAG	6 cut(s)	255, 503, 788, 806, 900, 1175
GlaI	GCGC	1 cut(s)	1288
GluI	GCNGC	1 cut(s)	54
GsuI	CTGGAG	1 cut(s)	375
HaeIII	GGCC	5 cut(s)	328, 619, 623, 949, 1529
HapII	CCGG	3 cut(s)	143, 384, 620
HgaI	GACGC	1 cut(s)	855
HhaI	GCGC	1 cut(s)	1289
Hin1II	CATG	9 cut(s)	100, 171, 197, 233, 266, 295, 628, 1528, 1747
Hin6I	GCGC	1 cut(s)	1287
HinP1I	GCGC	1 cut(s)	1287
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HinfI	GANTC	1 cut(s)	528
HpaII	CCGG	3 cut(s)	143, 384, 620
HphI	GGTGA	5 cut(s)	250, 486, 854, 1033, 1678
Hpy166II	GTNNAC	2 cut(s)	1180, 1309
Hpy188I	TCNGA	2 cut(s)	156, 525
Hpy188III	TCNNGA	7 cut(s)	185, 317, 649, 1257, 1276, 1364, 1519
Hpy8I	GTNNAC	2 cut(s)	1180, 1309
HpyAV	CCTTC	4 cut(s)	26, 415, 1094, 1634
HpyCH4III	ACNGT	3 cut(s)	425, 563, 1664
HpyCH4IV	ACGT	4 cut(s)	118, 893, 1090, 1431
HpyCH4V	TGCA	7 cut(s)	106, 266, 438, 907, 936, 1098, 1154
HpyF10VI	GCNNNNNNNGC	6 cut(s)	87, 461, 636, 788, 872, 1444
HpyF3I	CTNAG	7 cut(s)	522, 707, 792, 951, 1164, 1200, 1480
HpySE526I	ACGT	4 cut(s)	118, 893, 1090, 1431
Hsp92II	CATG	9 cut(s)	100, 171, 197, 233, 266, 295, 628, 1528, 1747
HspAI	GCGC	1 cut(s)	1287
KroI	GCCGGC	1 cut(s)	619
KroNI	GCCGGC	1 cut(s)	621
Kzo9I	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
LmnI	GCTCC	2 cut(s)	38, 356
LweI	GCATC	3 cut(s)	1298, 1357, 1514
MaeI	CTAG	6 cut(s)	255, 503, 788, 806, 900, 1175
MaeII	ACGT	4 cut(s)	118, 893, 1090, 1431
MaeIII	GTNAC	5 cut(s)	425, 1293, 1339, 1448, 1684
MalI	GATC	7 cut(s)	11, 444, 483, 574, 578, 696, 1559
MboI	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
MflI	RGATCY	1 cut(s)	694
MluI	ACGCGT	1 cut(s)	864
MmeI	TCCRAC	2 cut(s)	899, 1554
Mph1103I	ATGCAT	1 cut(s)	268
MroNI	GCCGGC	1 cut(s)	619
MseI	TTAA	4 cut(s)	582, 677, 980, 1652
MslI	CAYNNNNRTG	2 cut(s)	1144, 1353
MspA1I	CMGCKG	1 cut(s)	1019
MspI	CCGG	3 cut(s)	143, 384, 620
Mva1269I	GAATGC	3 cut(s)	55, 1650, 1671
MvnI	CGCG	3 cut(s)	318, 866, 1457
MwoI	GCNNNNNNNGC	6 cut(s)	87, 461, 636, 788, 872, 1444
NaeI	GCCGGC	1 cut(s)	621
NdeII	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
NgoMIV	GCCGGC	1 cut(s)	619
NheI	GCTAGC	3 cut(s)	502, 787, 899
NlaIII	CATG	9 cut(s)	100, 171, 197, 233, 266, 295, 628, 1528, 1747
NlaIV	GGNNCC	3 cut(s)	40, 832, 1148
NmeAIII	GCCGAG	1 cut(s)	436
NmuCI	GTSAC	2 cut(s)	425, 1684
NruI	TCGCGA	1 cut(s)	318
NsiI	ATGCAT	1 cut(s)	268
NspI	RCATGY	1 cut(s)	295
OliI	CACNNNNGTG	1 cut(s)	1144
PceI	AGGCCT	2 cut(s)	328, 949
PctI	GAATGC	3 cut(s)	55, 1650, 1671
PdiI	GCCGGC	1 cut(s)	621
PfeI	GAWTC	1 cut(s)	528
PflMI	CCANNNNNTGG	1 cut(s)	235
PkrI	GCNGC	1 cut(s)	55
PmaCI	CACGTG	1 cut(s)	119
PmlI	CACGTG	1 cut(s)	119
Ppu21I	YACGTR	1 cut(s)	119
PshAI	GACNNNNGTC	2 cut(s)	180, 1665
PsiI	TTATAA	1 cut(s)	1376
PspCI	CACGTG	1 cut(s)	119
PspN4I	GGNNCC	3 cut(s)	40, 832, 1148
PspPI	GGNCC	3 cut(s)	617, 722, 994
PsuI	RGATCY	1 cut(s)	694
RigI	GGCCGGCC	1 cut(s)	623
RruI	TCGCGA	1 cut(s)	318
RsaI	GTAC	4 cut(s)	634, 817, 1196, 1360
RsaNI	GTAC	4 cut(s)	633, 816, 1195, 1359
RseI	CAYNNNNRTG	2 cut(s)	1144, 1353
SaqAI	TTAA	4 cut(s)	582, 677, 980, 1652
SatI	GCNGC	1 cut(s)	54
Sau3AI	GATC	7 cut(s)	9, 442, 481, 572, 576, 694, 1557
Sau96I	GGNCC	3 cut(s)	617, 722, 994
SfaNI	GCATC	3 cut(s)	1298, 1357, 1514
SfcI	CTRYAG	2 cut(s)	870, 1701
SinI	GGWCC	2 cut(s)	722, 994
SmiI	ATTTAAAT	1 cut(s)	981
SmiMI	CAYNNNNRTG	2 cut(s)	1144, 1353
SmlI	CTYRAG	2 cut(s)	1390, 1442
SmoI	CTYRAG	2 cut(s)	1390, 1442
SseBI	AGGCCT	2 cut(s)	328, 949
SsiI	CCGC	8 cut(s)	54, 226, 630, 683, 875, 1019, 1457, 1613
SspMI	CTAG	6 cut(s)	255, 503, 788, 806, 900, 1175
StuI	AGGCCT	2 cut(s)	328, 949
StyI	CCWWGG	2 cut(s)	944, 997
SwaI	ATTTAAAT	1 cut(s)	981
TaaI	ACNGT	3 cut(s)	425, 563, 1664
TaiI	ACGT	4 cut(s)	121, 896, 1093, 1434
TaqI	TCGA	4 cut(s)	75, 184, 575, 1256
TauI	GCSGC	1 cut(s)	56
TfiI	GAWTC	1 cut(s)	528
Tru1I	TTAA	4 cut(s)	582, 677, 980, 1652
Tru9I	TTAA	4 cut(s)	582, 677, 980, 1652
TscAI	CASTG	2 cut(s)	933, 1669
TseFI	GTSAC	2 cut(s)	425, 1684
Tsp45I	GTSAC	2 cut(s)	425, 1684
TspDTI	ATGAA	9 cut(s)	42, 85, 397, 727, 788, 837, 1346, 1588, 1732
TspRI	CASTG	2 cut(s)	933, 1669
Van91I	CCANNNNNTGG	1 cut(s)	235
VpaK11BI	GGWCC	2 cut(s)	722, 994
XapI	RAATTY	3 cut(s)	922, 1210, 1382
XceI	RCATGY	1 cut(s)	295
XmiI	GTMKAC	1 cut(s)	1308
XspI	CTAG	6 cut(s)	255, 503, 788, 806, 900, 1175
Zsp2I	ATGCAT	1 cut(s)	268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.