Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Reverse (-)

42267531 .. 42272608

Gene Structure 5078 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002959

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGTCAGAAAGAGCCTCTTTCTTCTTCCGTGACACCAAAACACCCGTCGTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTCTCTTCCTTCGAGTGGCTTCTAACCCAGGCATATTGGTGGAGGCCCGTCTCTCGAACTGTGTTCCCGGAGAGATTGCCAGAAGATGACAAACTTCCTGCAGTCGACGTGTTCATTTGCACCGCTGATCCTGATCTGGAGCCAACCGTGGCGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCGAGAAGCTTCACGTGTATTTGTCAGATGATGGCGGTGCTGATGTGACTCTGAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTACAAGATCAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGCAGCAGAGGATGAGAATGAAGATGGTGCTTTGGGGGTTACTGACTTCATACAAGAGAGGCAAATTATTCAGGAAAAATATGAGGTGTTTAAGGAAAGAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTCGAGATCATTCTGCAGTGATTGAGGTGATACAAGAAAGTTCTAGTAATCATGCATTTGAAGAGAATGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTTCTTCGAGTATCTGGTGTGATCAGTAATTCTCCCTTCATATTAGGGCTTGATTGTGACATGTATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACACTAGCACTTGTGCAATTCCCTCATAAATTCCACAACATCAGTAAGAATGACATCTACGACAGTCAGATGAGAGAGGTGTTTTCGGTGCTATATCAAGGTTTTGATGGACTTCAAGGGCCATGTGTATCCGGTACTGGCTATTACATCAAGACGTTATCCTTGTATGGAAAATCCCTAAAGGAAGATCATAAGGATCTTATGGAACTTAGACAATCTGTTGGTCCTTCGAATGAGTTCATAAAATCCCTGCTTGGAAACTACAATCCTAATATGGAAATGGCACAGCTAACTGAGACCCAACAGCTAGCCTCTTGTGCCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGGGTCTGTAGTGGAAGACTATTTCACCAGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAATGGCACCACTAATTTGAATAACTTTTTGGTCCAAGGGACAAGATGGAGTTCTGGGTTGGTTGATGTTGCCATCTCCAAATATTGCCCTCTTATATATGGCCTTTCTAAAATGTTTGTCCCTGAAAGTATGTGCTATGCATGGATAGCAATTTTCCCTATTTGCCGGTTCTTCTCACTCTGGTGCCTTGCAACTATACCTCCGCTTTGCCTAGTCAACGGCATTTCCCTATACCCTGAGAAATTTGGTCTGAGGGAAGCAAGTTTCTTCCCAACAAATAAAGTTGATGACGTTGAGCAACTCAAGCGTTACAACGCGGGGGTATTTGATTTCCAAACCTCAGCACATTTTCTTGTTCCATTGGCTTCATTGGTTATGTTGAACATGGCCTCCCTTTGTGTGGGCATTGCCAGAGTGATCTTTCTGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCGGTGGTCGTCAATTACCCTATAATAGAAGGAATGCTAATAAGGAAAGACAGTGGTCGCATTCCACCATCAGTCACCCTATTGTCTGCTACAGCTTCAATCATTTTCTGCGTTTTGGGTTCAGTCAGGAAACCATGGATCGAAGATGAGAAGGTGAAGAAATCCAATTTGGAATTGGAATCGGAAGAAAACAGAGAGGGAGTGGATGATGGCGTGGTGGACGGAGAAGAGATTGTGGGAGGAGCACTTCATGAGGACGATGGAGTCGGCGGAGTCGATGAGGTCCACAACCAACCCAAACCCGCAATGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

702

Amino Acids

78.88

Weight (kDa)

5.33

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	62 - 348	3.8e-78	Cellulose synthase
Cellulose_synt	PF03552	351 - 514	2.7e-31	Cellulose synthase
Cellulose_synt	PF03552	528 - 649	1.9e-06	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2054
Acc36I	ACCTGC	1 cut(s)	393
AccB1I	GGYRCC	3 cut(s)	1187, 1325, 1503
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	2 cut(s)	675, 1637
AclWI	GGATC	5 cut(s)	203, 794, 833, 1059, 1937
AcoI	YGGCCR	1 cut(s)	72
AcsI	RAATTY	3 cut(s)	884, 1279, 1562
AcvI	CACGTG	1 cut(s)	292
AfaI	GTAC	3 cut(s)	51, 389, 991
AfiI	CCNNNNNNNGG	2 cut(s)	96, 1720
AflIII	ACRYGT	3 cut(s)	189, 291, 786
AgsI	TTSAA	6 cut(s)	629, 706, 971, 1339, 1702, 1890
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	2 cut(s)	108, 1247
AjuI	GAANNNNNNNTTGG	4 cut(s)	1331, 1363, 1943, 1975
AleI	CACNNNNGTG	1 cut(s)	1501
AloI	GAACNNNNNNTCC	2 cut(s)	1694, 1726
AluBI	AGCT	9 cut(s)	79, 286, 716, 812, 847, 1144, 1162, 1260, 1886
AluI	AGCT	9 cut(s)	79, 286, 716, 812, 847, 1144, 1162, 1260, 1886
Alw21I	GWGCWC	3 cut(s)	81, 718, 2038
Alw26I	GTCTC	5 cut(s)	88, 136, 411, 673, 1145
AlwI	GGATC	5 cut(s)	203, 794, 833, 1059, 1937
Ama87I	CYCGRG	1 cut(s)	278
AoxI	GGCC	6 cut(s)	72, 125, 974, 1304, 1420, 1707
ApeKI	GCWGC	1 cut(s)	428
ApoI	RAATTY	3 cut(s)	884, 1279, 1562
ArsI	GACNNNNNNTTYG	2 cut(s)	30, 62
Asp700I	GAANNNNTTC	1 cut(s)	1091
AspS9I	GGNCC	5 cut(s)	126, 974, 1079, 1351, 2074
AsuC2I	CCSGG	1 cut(s)	149
AsuHPI	GGTGA	8 cut(s)	247, 560, 607, 843, 1211, 1237, 1858, 1957
AsuII	TTCGAA	1 cut(s)	1085
AsuNHI	GCTAGC	2 cut(s)	1162, 1256
AvaI	CYCGRG	1 cut(s)	278
AvaII	GGWCC	3 cut(s)	1079, 1351, 2074
BanI	GGYRCC	3 cut(s)	1187, 1325, 1503
BanII	GRGCYC	2 cut(s)	81, 718
BbrPI	CACGTG	1 cut(s)	292
BbsI	GAAGAC	2 cut(s)	1242, 1768
Bbv12I	GWGCWC	3 cut(s)	81, 718, 2038
BbvCI	CCTCAGC	1 cut(s)	1660
BbvI	GCAGC	1 cut(s)	440
BceAI	ACGGC	1 cut(s)	1555
BciT130I	CCWGG	2 cut(s)	110, 1249
BciVI	GTATCC	1 cut(s)	994
BclI	TGATCA	1 cut(s)	747
BcnI	CCSGG	1 cut(s)	149
BcoDI	GTCTC	5 cut(s)	88, 136, 411, 673, 1145
BfaI	CTAG	5 cut(s)	612, 860, 1163, 1257, 1532
BfmI	CTRYAG	4 cut(s)	180, 582, 1227, 1881
BfuAI	ACCTGC	1 cut(s)	393
BfuI	GTATCC	1 cut(s)	994
BisI	GCNGC	2 cut(s)	72, 429
BlsI	GCNGC	2 cut(s)	73, 430
Bme1390I	CCNGG	3 cut(s)	110, 149, 1249
Bme18I	GGWCC	3 cut(s)	1079, 1351, 2074
BmeT110I	CYCGRG	1 cut(s)	278
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	5 cut(s)	126, 974, 1079, 1351, 2074
BmiI	GGNNCC	4 cut(s)	222, 1189, 1327, 1505
BmrFI	CCNGG	3 cut(s)	110, 149, 1249
BmrI	ACTGGG	1 cut(s)	564
BmtI	GCTAGC	2 cut(s)	1166, 1260
BmuI	ACTGGG	1 cut(s)	564
BoxI	GACNNNNGTC	1 cut(s)	1845
BpiI	GAAGAC	2 cut(s)	1242, 1768
BplI	GAGNNNNNCTC	2 cut(s)	68, 100
BpmI	CTGGAG	2 cut(s)	239, 732
Bpu10I	CCTNAGC	1 cut(s)	1660
Bpu14I	TTCGAA	1 cut(s)	1085
BpuEI	CTTGAG	1 cut(s)	1607
BpuMI	CCSGG	1 cut(s)	149
BsaAI	YACGTR	1 cut(s)	292
BsaBI	GATNNNNATC	1 cut(s)	213
BsaI	GGTCTC	2 cut(s)	411, 1145
BsaJI	CCNNGG	6 cut(s)	108, 228, 258, 1301, 1354, 1925
BsaWI	WCCGGW	1 cut(s)	986
BsaXI	ACNNNNNCTCC	6 cut(s)	1504, 1534, 1694, 1724, 1748, 1778
Bsc4I	CCNNNNNNNGG	2 cut(s)	96, 1720
Bse118I	RCCGGY	1 cut(s)	1485
Bse1I	ACTGG	2 cut(s)	559, 997
Bse3DI	GCAATG	6 cut(s)	802, 828, 1264, 1327, 1725, 2103
Bse8I	GATNNNNATC	1 cut(s)	213
BseBI	CCWGG	2 cut(s)	110, 1249
BseDI	CCNNGG	6 cut(s)	108, 228, 258, 1301, 1354, 1925
BseGI	GGATG	2 cut(s)	442, 2002
BseJI	GATNNNNATC	1 cut(s)	213
BseLI	CCNNNNNNNGG	2 cut(s)	96, 1720
BseMI	GCAATG	6 cut(s)	802, 828, 1264, 1327, 1725, 2103
BseMII	CTCAG	6 cut(s)	438, 1140, 1322, 1548, 1562, 1674
BseNI	ACTGG	2 cut(s)	559, 997
BseRI	GAGGAG	1 cut(s)	2046
BseX3I	CGGCCG	1 cut(s)	72
BseXI	GCAGC	1 cut(s)	440
BsgI	GTGCAG	1 cut(s)	421
Bsh1236I	CGCG	2 cut(s)	675, 1637
Bsh1285I	CGRYCG	1 cut(s)	75
BshFI	GGCC	6 cut(s)	74, 127, 976, 1306, 1422, 1709
BshNI	GGYRCC	3 cut(s)	1187, 1325, 1503
BsiEI	CGRYCG	1 cut(s)	75
BsiHKAI	GWGCWC	3 cut(s)	81, 718, 2038
BsiHKCI	CYCGRG	1 cut(s)	278
BsiSI	CCGG	3 cut(s)	149, 987, 1486
BslFI	GGGAC	2 cut(s)	1372, 1424
BslI	CCNNNNNNNGG	2 cut(s)	96, 1720
BsmAI	GTCTC	5 cut(s)	88, 136, 411, 673, 1145
BsmBI	CGTCTC	2 cut(s)	88, 136
BsmFI	GGGAC	2 cut(s)	1372, 1424
BsmI	GAATGC	2 cut(s)	1830, 1851
BsnI	GGCC	6 cut(s)	74, 127, 976, 1306, 1422, 1709
Bso31I	GGTCTC	2 cut(s)	411, 1145
BsoBI	CYCGRG	1 cut(s)	278
Bsp119I	TTCGAA	1 cut(s)	1085
Bsp1286I	GDGCHC	3 cut(s)	81, 718, 2038
Bsp19I	CCATGG	2 cut(s)	258, 1925
Bsp68I	TCGCGA	1 cut(s)	675
BspANI	GGCC	6 cut(s)	74, 127, 976, 1306, 1422, 1709
BspCNI	CTCAG	6 cut(s)	437, 1141, 1321, 1549, 1563, 1673
BspFNI	CGCG	2 cut(s)	675, 1637
BspHI	TCATGA	1 cut(s)	2041
BspLI	GGNNCC	4 cut(s)	222, 1189, 1327, 1505
BspMAI	CTGCAG	2 cut(s)	184, 586
BspMI	ACCTGC	1 cut(s)	393
BspOI	GCTAGC	2 cut(s)	1166, 1260
BspPI	GGATC	5 cut(s)	203, 794, 833, 1059, 1937
BspT104I	TTCGAA	1 cut(s)	1085
BspT107I	GGYRCC	3 cut(s)	1187, 1325, 1503
BspTNI	GGTCTC	2 cut(s)	411, 1145
BsrDI	GCAATG	6 cut(s)	802, 828, 1264, 1327, 1725, 2103
BsrFI	RCCGGY	1 cut(s)	1485
BsrI	ACTGG	2 cut(s)	559, 997
BssAI	RCCGGY	1 cut(s)	1485
BssECI	CCNNGG	6 cut(s)	108, 228, 258, 1301, 1354, 1925
BssT1I	CCWWGG	4 cut(s)	258, 1301, 1354, 1925
Bst2UI	CCWGG	2 cut(s)	110, 1249
Bst4CI	ACNGT	5 cut(s)	142, 229, 247, 920, 1844
Bst6I	CTCTTC	4 cut(s)	91, 624, 1197, 2013
BstBAI	YACGTR	1 cut(s)	292
BstBI	TTCGAA	1 cut(s)	1085
BstC8I	GCNNGC	4 cut(s)	819, 1164, 1258, 1262
BstDEI	CTNAG	7 cut(s)	424, 1064, 1149, 1308, 1557, 1571, 1660
BstDSI	CCRYGG	3 cut(s)	228, 258, 1925
BstF5I	GGATG	2 cut(s)	442, 2002
BstFNI	CGCG	2 cut(s)	675, 1637
BstMAI	GTCTC	5 cut(s)	88, 136, 411, 673, 1145
BstMCI	CGRYCG	1 cut(s)	75
BstMWI	GCNNNNNNNGC	5 cut(s)	818, 1172, 1266, 1466, 1624
BstNI	CCWGG	2 cut(s)	110, 1249
BstNSI	RCATGY	2 cut(s)	652, 790
BstPAI	GACNNNNGTC	1 cut(s)	1845
BstSCI	CCNGG	3 cut(s)	108, 147, 1247
BstSFI	CTRYAG	4 cut(s)	180, 582, 1227, 1881
BstUI	CGCG	2 cut(s)	675, 1637
BstV1I	GCAGC	1 cut(s)	440
BstV2I	GAAGAC	2 cut(s)	1242, 1768
BstX2I	RGATCY	1 cut(s)	1051
BstYI	RGATCY	1 cut(s)	1051
BstZI	CGGCCG	1 cut(s)	72
BsuI	GTATCC	1 cut(s)	994
BsuRI	GGCC	6 cut(s)	74, 127, 976, 1306, 1422, 1709
BtgI	CCRYGG	3 cut(s)	228, 258, 1925
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	2 cut(s)	442, 2002
BtsI	GCAGTG	1 cut(s)	591
BtsIMutI	CAGTG	5 cut(s)	243, 552, 591, 1290, 1849
BtuMI	TCGCGA	1 cut(s)	675
BveI	ACCTGC	1 cut(s)	393
Cac8I	GCNNGC	4 cut(s)	819, 1164, 1258, 1262
CciI	TCATGA	1 cut(s)	2041
Cfr10I	RCCGGY	1 cut(s)	1485
Cfr13I	GGNCC	5 cut(s)	126, 974, 1079, 1351, 2074
CseI	GACGC	1 cut(s)	557
CsiI	ACCWGGT	1 cut(s)	1247
Csp6I	GTAC	3 cut(s)	50, 388, 990
CviQI	GTAC	3 cut(s)	50, 388, 990
DdeI	CTNAG	7 cut(s)	424, 1064, 1149, 1308, 1557, 1571, 1660
DrdI	GACNNNNNNGTC	1 cut(s)	2054
DseDI	GACNNNNNNGTC	1 cut(s)	2054
EaeI	YGGCCR	1 cut(s)	72
EagI	CGGCCG	1 cut(s)	72
Eam1104I	CTCTTC	4 cut(s)	91, 624, 1197, 2013
EarI	CTCTTC	4 cut(s)	91, 624, 1197, 2013
EciI	GGCGGA	1 cut(s)	2076
Ecl136II	GAGCTC	2 cut(s)	79, 716
EclXI	CGGCCG	1 cut(s)	72
Eco130I	CCWWGG	4 cut(s)	258, 1301, 1354, 1925
Eco147I	AGGCCT	1 cut(s)	1306
Eco24I	GRGCYC	2 cut(s)	81, 718
Eco31I	GGTCTC	2 cut(s)	411, 1145
Eco47I	GGWCC	3 cut(s)	1079, 1351, 2074
Eco52I	CGGCCG	1 cut(s)	72
Eco53kI	GAGCTC	2 cut(s)	79, 716
Eco72I	CACGTG	1 cut(s)	292
Eco88I	CYCGRG	1 cut(s)	278
EcoICRI	GAGCTC	2 cut(s)	79, 716
EcoRI	GAATTC	1 cut(s)	1279
EcoRII	CCWGG	2 cut(s)	108, 1247
EcoT14I	CCWWGG	4 cut(s)	258, 1301, 1354, 1925
EcoT22I	ATGCAT	2 cut(s)	625, 1462
EcoT38I	GRGCYC	2 cut(s)	81, 718
ErhI	CCWWGG	4 cut(s)	258, 1301, 1354, 1925
Esp3I	CGTCTC	2 cut(s)	88, 136
FalI	AAGNNNNNCTT	1 cut(s)	33
FaqI	GGGAC	2 cut(s)	1372, 1424
FauI	CCCGC	2 cut(s)	1630, 2101
FbaI	TGATCA	1 cut(s)	747
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	2 cut(s)	72, 429
FokI	GGATG	2 cut(s)	449, 2009
FriOI	GRGCYC	2 cut(s)	81, 718
Fsp4HI	GCNGC	2 cut(s)	72, 429
FspBI	CTAG	5 cut(s)	612, 860, 1163, 1257, 1532
GluI	GCNGC	2 cut(s)	72, 429
GsuI	CTGGAG	2 cut(s)	239, 732
HaeIII	GGCC	6 cut(s)	74, 127, 976, 1306, 1422, 1709
HapII	CCGG	3 cut(s)	149, 987, 1486
HgaI	GACGC	1 cut(s)	557
HincII	GTYRAC	2 cut(s)	187, 1537
HindII	GTYRAC	2 cut(s)	187, 1537
HindIII	AAGCTT	1 cut(s)	284
HinfI	GANTC	5 cut(s)	325, 370, 1970, 2055, 2064
HpaII	CCGG	3 cut(s)	149, 987, 1486
HphI	GGTGA	8 cut(s)	247, 560, 607, 843, 1211, 1237, 1858, 1957
Hpy166II	GTNNAC	4 cut(s)	187, 1537, 2011, 2077
Hpy188I	TCNGA	6 cut(s)	7, 304, 330, 924, 1572, 1975
Hpy188III	TCNNGA	9 cut(s)	135, 212, 218, 497, 572, 674, 1006, 1918, 2042
Hpy8I	GTNNAC	4 cut(s)	187, 1537, 2011, 2077
Hpy99I	CGWCG	3 cut(s)	50, 191, 573
HpyAV	CCTTC	6 cut(s)	100, 696, 772, 1092, 1814, 1936
HpyCH4III	ACNGT	5 cut(s)	142, 229, 247, 920, 1844
HpyCH4IV	ACGT	5 cut(s)	189, 291, 353, 1010, 1611
HpyF10VI	GCNNNNNNNGC	5 cut(s)	818, 1172, 1266, 1466, 1624
HpyF3I	CTNAG	7 cut(s)	424, 1064, 1149, 1308, 1557, 1571, 1660
HpySE526I	ACGT	5 cut(s)	189, 291, 353, 1010, 1611
Ksp22I	TGATCA	1 cut(s)	747
LmnI	GCTCC	4 cut(s)	220, 558, 713, 2033
Lsp1109I	GCAGC	1 cut(s)	440
MabI	ACCWGGT	1 cut(s)	1247
MaeI	CTAG	5 cut(s)	612, 860, 1163, 1257, 1532
MaeII	ACGT	5 cut(s)	189, 291, 353, 1010, 1611
MaeIII	GTNAC	7 cut(s)	29, 322, 463, 548, 782, 1628, 1864
MflI	RGATCY	1 cut(s)	1051
MhlI	GDGCHC	3 cut(s)	81, 718, 2038
MlyI	GAGTC	3 cut(s)	319, 2064, 2073
MmeI	TCCRAC	2 cut(s)	1256, 1734
Mph1103I	ATGCAT	2 cut(s)	625, 1462
MroXI	GAANNNNTTC	1 cut(s)	1091
MseI	TTAA	2 cut(s)	516, 2104
MslI	CAYNNNNRTG	2 cut(s)	118, 1501
MspA1I	CMGCKG	1 cut(s)	206
MspI	CCGG	3 cut(s)	149, 987, 1486
MspR9I	CCNGG	3 cut(s)	110, 149, 1249
Mva1269I	GAATGC	2 cut(s)	1830, 1851
MvaI	CCWGG	2 cut(s)	110, 1249
MvnI	CGCG	2 cut(s)	675, 1637
MwoI	GCNNNNNNNGC	5 cut(s)	818, 1172, 1266, 1466, 1624
NciI	CCSGG	1 cut(s)	149
NcoI	CCATGG	2 cut(s)	258, 1925
NheI	GCTAGC	2 cut(s)	1162, 1256
NlaIV	GGNNCC	4 cut(s)	222, 1189, 1327, 1505
NmeAIII	GCCGAG	2 cut(s)	100, 793
NmuCI	GTSAC	5 cut(s)	29, 322, 548, 782, 1864
NruI	TCGCGA	1 cut(s)	675
NsiI	ATGCAT	2 cut(s)	625, 1462
NspI	RCATGY	2 cut(s)	652, 790
NspV	TTCGAA	1 cut(s)	1085
OliI	CACNNNNGTG	1 cut(s)	1501
PagI	TCATGA	1 cut(s)	2041
PceI	AGGCCT	1 cut(s)	1306
PciI	ACATGT	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	1 cut(s)	2064
PctI	GAATGC	2 cut(s)	1830, 1851
PdmI	GAANNNNTTC	1 cut(s)	1091
PfeI	GAWTC	2 cut(s)	370, 1970
PfoI	TCCNGGA	1 cut(s)	147
PkrI	GCNGC	2 cut(s)	73, 430
PleI	GAGTC	3 cut(s)	319, 2063, 2072
PmaCI	CACGTG	1 cut(s)	292
PmlI	CACGTG	1 cut(s)	292
PpsI	GAGTC	3 cut(s)	319, 2063, 2072
Ppu21I	YACGTR	1 cut(s)	292
PscI	ACATGT	1 cut(s)	786
PshAI	GACNNNNGTC	1 cut(s)	1845
Psp124BI	GAGCTC	2 cut(s)	81, 718
Psp6I	CCWGG	2 cut(s)	108, 1247
PspCI	CACGTG	1 cut(s)	292
PspGI	CCWGG	2 cut(s)	108, 1247
PspN4I	GGNNCC	4 cut(s)	222, 1189, 1327, 1505
PspPI	GGNCC	5 cut(s)	126, 974, 1079, 1351, 2074
PstI	CTGCAG	2 cut(s)	184, 586
PsuI	RGATCY	1 cut(s)	1051
RruI	TCGCGA	1 cut(s)	675
RsaI	GTAC	3 cut(s)	51, 389, 991
RsaNI	GTAC	3 cut(s)	50, 388, 990
RseI	CAYNNNNRTG	2 cut(s)	118, 1501
SacI	GAGCTC	2 cut(s)	81, 718
SalI	GTCGAC	1 cut(s)	185
SaqAI	TTAA	2 cut(s)	516, 2104
SatI	GCNGC	2 cut(s)	72, 429
Sau96I	GGNCC	5 cut(s)	126, 974, 1079, 1351, 2074
SchI	GAGTC	3 cut(s)	319, 2064, 2073
ScrFI	CCNGG	3 cut(s)	110, 149, 1249
SduI	GDGCHC	3 cut(s)	81, 718, 2038
SexAI	ACCWGGT	1 cut(s)	1247
SfcI	CTRYAG	4 cut(s)	180, 582, 1227, 1881
SfuI	TTCGAA	1 cut(s)	1085
SinI	GGWCC	3 cut(s)	1079, 1351, 2074
SmiMI	CAYNNNNRTG	2 cut(s)	118, 1501
SmlI	CTYRAG	1 cut(s)	1622
SmoI	CTYRAG	1 cut(s)	1622
SseBI	AGGCCT	1 cut(s)	1306
SspI	AATATT	1 cut(s)	1403
SspMI	CTAG	5 cut(s)	612, 860, 1163, 1257, 1532
SstI	GAGCTC	2 cut(s)	81, 718
StuI	AGGCCT	1 cut(s)	1306
StyD4I	CCNGG	3 cut(s)	108, 147, 1247
StyI	CCWWGG	4 cut(s)	258, 1301, 1354, 1925
TaaI	ACNGT	5 cut(s)	142, 229, 247, 920, 1844
TaiI	ACGT	5 cut(s)	192, 294, 356, 1013, 1614
TaqI	TCGA	9 cut(s)	93, 136, 186, 267, 571, 733, 1085, 1932, 2067
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	2 cut(s)	370, 1970
Tru1I	TTAA	2 cut(s)	516, 2104
Tru9I	TTAA	2 cut(s)	516, 2104
TscAI	CASTG	5 cut(s)	250, 559, 591, 1290, 1849
TseFI	GTSAC	5 cut(s)	29, 322, 548, 782, 1864
TseI	GCWGC	1 cut(s)	428
Tsp45I	GTSAC	5 cut(s)	29, 322, 548, 782, 1864
TspGWI	ACGGA	2 cut(s)	17, 2028
TspRI	CASTG	5 cut(s)	250, 559, 591, 1290, 1849
VpaK11BI	GGWCC	3 cut(s)	1079, 1351, 2074
XapI	RAATTY	3 cut(s)	884, 1279, 1562
XceI	RCATGY	2 cut(s)	652, 790
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1963
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	1091
XspI	CTAG	5 cut(s)	612, 860, 1163, 1257, 1532
Zsp2I	ATGCAT	2 cut(s)	625, 1462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.