Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

5507357 .. 5614166

Gene Structure 106810 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG032800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4107 bp

ATGGATCAGAGTTCTAATGCCCCCATGCATCTCTGCCATGTCAACAAGCTCACAATCTTCATTAATCGAACGTATACAGTCATATACGCCGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTTTCTTCTTCCATGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTCTCTTCCTTCGAATGGCTTCTAAGCCAGGCATATCGGTGGAGGCCCGTCTCTCGAACTGTGTTTCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAGTCGACGTGTTCATTTGCACCGCTGATCCGGATAAGGAGCCACCAGTGGAGGTGATGAACACTGTAATATCAGCCATGGCACTAGATTATCCACCCGAGAAGCTTCACGTGTATTTGTCAGATGATGGCGGTGCTGATGTGACTCTGAATGGCATGCGAGAGGCTTGGAAGTTTGCAAAGCGGTGGATTCCATTTTGTAAGATGTATAAGATCAAGTGCAGGTCTCCGAAAGCCTATTTCTCAGCAGTAGAGGATGAGAATGAAGACGGTGATTTGGGGGGTACTGATTTCATACAAGAGAGACAAATTGTTCAGGAAAAATATGAGTTGTTTAAGGAAAAAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTCGAGATCATTCTGCAGTGATTGAGGTGATACAAGAAAGTTCTAGTAATCATGCATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTTCTTCGGGTATCCGGTGTGATCAGTAATTCTCCCTTCATATTAGGGCTTGATTGTGACATGTATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCACTTGTGCAATTCCCTCAGAAATTCCACAACATCAGTAAGAATGACATCTACGACAGTCAGTTGAGAGAGACGTTTATGGTGCTATGGCAAGGTTTTGATGGACTACAAGGGCCATGCGTGTCCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAGGATCATAAGGATCTTATGGGACTTAGACAATCTGTTGGTCCATCAAGTGAGTTCATAAAATCCCTGCTTGGAAACTACAATCCTAATATGAAAATGGCACAGCTAGCTGAGACCCAACAGCTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGTTGGTTTCTTATACGCCTCTGTAGTGGAAGATTATTTCACAGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCCAGGCCTCAGTTCTTGGGCAGTGGCACCACTAATTTGAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCTGGGTTGGTTGATGTTGCCATCTCCAAGTACTGCCCTCTTATATATGGTCTTACTAAAATGTCTTTCCTTGAAAGTATGTGCTATGGATGGCTAGCAATTTTCCCTATTTGCCGGTTCTTCTCACTCTGGTGCCATGCAACTATACCTCAGCTTTGCCTAATCAACGGCATTTCCCTGTACCCTGAGGTCTCAAATTCGTATTTTTGGATATTCTCTTTTGTATTCCTCTCGTCTTTTTTGAGACATTTATACGAGATCCTCACAACGGAAGCGTCATTACAACATTGGATATACGAGCAAAGAATATGGATAATGAAAGCAGTTACATCTCACTTATATGGTAGTCTTGATGCTTTTATGAAGAAATTTGGTTTGAGGGAAGCAAGTTTCTTCCCAACAAATAAAGTTGATGACGTTGAGCAACTCAAGCGTTATAACAAGGGGGTATTTGATTTCCAAACCTCAGCACTTTTTCTTGTTCCATTGGCTTCACTGGTAATCTTGAACTTGGCCTCCCTTTGTGTGGGCATTGCCAGAGTGATCTTTCTAGGGGAGTTGGAGAAGTTGTTCATACAAGTCTTCATACCATTTTATGTGGTGGTCGTCAATTACCCTATTATAGAAGGAATGCTAATAAGGAAAGACAATGGTCGCATCCCACCATCAGTCACCTTATTGTCTGCTACAGCTTCAATCATTTTCTGCGTTTTGGGTTCAAGAGTGGAGAAGAGAGGTATAAAATCACAAAAAATAGTTAGAGAAGCTATGGATCAGAGTTCTAATGCCCCCATGCATCTCTGCCATGTCAACAAGCTCACAATCTTCATTAATCGAACGTATACAGTCATATACTCCGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTTTCTTCTTCCATGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTCTCTTCCTTCGAGTGTCTTCTAACCCAGGCATATCGGTGGAGGCCCGTCTCTCGAACTGTGTTCCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAGTCGACGTGTTCATTTGCACCGCTGATCCGGAGAAGGAGCCACCCGTGGAGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCAAGAAGCTTCACGTGTATTTGTCAGATGATGGCGGTGCTGATGTGACTCTGAATGGTATGAGAGAGGCTTGGATGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTATAAGATCAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGCAGCAGAGGATGAGAATGAAGATGGTGATTTTGGGGGTACTGATTTCATACAAGAGAGGCAAATTGTTCAGGAAAAATATGAGGTGTTTAAGGAAAGAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTCTAGATCATTCTACAGTGATTGAGGTGATACAAGATAGTTCTAGTAATCATGCATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAGAAAATACCTTCCCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTGCTTCGGGTATCCGGTGTGATCAGTAATTCTCCCTTCATATTAGGGCTTGATTGTGACATGTATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCACTTGTGCAATTCCCTCAGAAATTCCACAACATCAGTAAGAATGACATCTACGACAGTCAGTTGAGAGAGACGTTTTCGGTGCTATGGCAAGGTTTTGATGGACTTCAAGGGCCATGCGTGACCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAGGATCATAAGGATCTTATGGAACTTAGACAATCTGTTGGTCCATCAAATGAGTTCATAAAATCCCTGCTTGGAAACTACAATCCTAATATGAAAATGGCACAGCTAGCTGAGACCCAACAGCTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGTGGAAGATTATTTCACAGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGTGGCACCACTAATTTGAATGACGTTTTGGTCCAAAGGACAAGATGGAGTTATGGGTTGGTTGATGTTGCCATCTCCAGATACTGCCCTCTTATATATGGTCTTTCTAAAATGTCTTTCCTTGAAAGTATGTGCTATGCATGGCTAGCAATTTACCCTATTTGCCGGTTCTTCTCACTCTGGTGCTTTGCAACTATACCTCAGCTTTGCCTAGTCAAGGGCATTTCCCTGTACCCTGAGGAATCTGGCCAATCGACGATGGCGGCGCACCAGATGTGGTCCGAATTCACCGACCCGATCGCCCTCAGTCTCCTTTCAAGCCTCTTCGACGCCTCGATCCGAGTCTTCCAGAACTTGACCCAGTTCTTCTCTTCTTCTTATTCAGATAATCACATGCCTAAACCAACAATTTATCGACAAGGTGGGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

1368

Amino Acids

155.57

Weight (kDa)

6.47

Isoelectric Point (pI)

46.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 382	1e-79	Cellulose synthase
Cellulose_synt	PF03552	388 - 738	5.3e-57	Cellulose synthase
Cellulose_synt	PF03552	847 - 1133	1.1e-78	Cellulose synthase
Cellulose_synt	PF03552	1136 - 1300	9.6e-36	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1917
AasI	GACNNNNNNGTC	2 cut(s)	1457, 3704
Acc36I	ACCTGC	2 cut(s)	501, 2748
AccB1I	GGYRCC	5 cut(s)	1295, 1433, 1611, 3542, 3680
AccI	GTMKAC	4 cut(s)	74, 294, 2321, 2541
AccII	CGCG	3 cut(s)	783, 3030, 3578
AccIII	TCCGGA	3 cut(s)	256, 319, 2566
AciI	CCGC	9 cut(s)	179, 312, 420, 472, 2426, 2559, 2667, 2719, 3938
AcoI	YGGCCR	3 cut(s)	180, 2427, 3922
AcsI	RAATTY	7 cut(s)	992, 1387, 1675, 1847, 3239, 3634, 3959
AcvI	CACGTG	2 cut(s)	400, 2647
AcyI	GRCGYC	1 cut(s)	4005
AfaI	GTAC	9 cut(s)	574, 1099, 1282, 1511, 1661, 2821, 3346, 3529, 3908
AfiI	CCNNNNNNNGG	6 cut(s)	204, 1147, 1747, 2005, 3394, 3892
AflIII	ACRYGT	7 cut(s)	297, 399, 894, 2544, 2646, 3141, 3576
AgeI	ACCGGT	1 cut(s)	3341
AjiI	CACGTC	2 cut(s)	298, 2545
AjnI	CCWGG	3 cut(s)	216, 1409, 2463
AjuI	GAANNNNNNNTTGG	4 cut(s)	1439, 1471, 3686, 3718
AleI	CACNNNNGTG	2 cut(s)	1609, 3856
AloI	GAACNNNNNNTCC	6 cut(s)	238, 270, 1979, 2011, 2033, 2065
Alw21I	GWGCWC	4 cut(s)	189, 826, 2436, 3073
AlwNI	CAGNNNCTG	1 cut(s)	3759
Ama87I	CYCGRG	1 cut(s)	386
Aor13HI	TCCGGA	3 cut(s)	256, 319, 2566
ApeKI	GCWGC	1 cut(s)	2783
ApoI	RAATTY	7 cut(s)	992, 1387, 1675, 1847, 3239, 3634, 3959
AseI	ATTAAT	2 cut(s)	63, 2310
AsiGI	ACCGGT	1 cut(s)	3341
Asp700I	GAANNNNTTC	2 cut(s)	207, 2048
AspLEI	GCGC	1 cut(s)	3943
AspS9I	GGNCC	9 cut(s)	234, 1082, 1187, 1459, 2481, 3329, 3434, 3706, 3954
AsuC2I	CCSGG	1 cut(s)	2504
AsuII	TTCGAA	1 cut(s)	201
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	5 cut(s)	1187, 1459, 3434, 3706, 3954
AxyI	CCTNAGG	2 cut(s)	1665, 3912
BalI	TGGCCA	1 cut(s)	3924
BanI	GGYRCC	5 cut(s)	1295, 1433, 1611, 3542, 3680
BanII	GRGCYC	4 cut(s)	189, 826, 2436, 3073
BarI	GAAGNNNNNNTAC	2 cut(s)	1743, 1775
BbrPI	CACGTG	2 cut(s)	400, 2647
BbsI	GAAGAC	4 cut(s)	561, 2053, 2447, 4012
Bbv12I	GWGCWC	4 cut(s)	189, 826, 2436, 3073
BbvCI	CCTCAGC	3 cut(s)	1629, 1945, 3876
BbvI	GCAGC	1 cut(s)	2795
BceAI	ACGGC	2 cut(s)	74, 1663
BciT130I	CCWGG	3 cut(s)	218, 1411, 2465
BciVI	GTATCC	2 cut(s)	856, 3103
BclI	TGATCA	2 cut(s)	855, 3102
BcnI	CCSGG	1 cut(s)	2504
BfmI	CTRYAG	9 cut(s)	115, 288, 690, 1335, 2166, 2362, 2535, 2937, 3582
BfuAI	ACCTGC	2 cut(s)	501, 2748
BfuI	GTATCC	2 cut(s)	856, 3103
BisI	GCNGC	4 cut(s)	180, 2427, 2784, 3939
BlsI	GCNGC	4 cut(s)	181, 2428, 2785, 3940
BmcAI	AGTACT	1 cut(s)	1511
Bme1390I	CCNGG	4 cut(s)	218, 1411, 2465, 2504
Bme18I	GGWCC	5 cut(s)	1187, 1459, 3434, 3706, 3954
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	2 cut(s)	298, 2545
BmgT120I	GGNCC	9 cut(s)	234, 1082, 1187, 1459, 2481, 3329, 3434, 3706, 3954
BmiI	GGNNCC	7 cut(s)	330, 1297, 1435, 1613, 2577, 3544, 3682
BmrFI	CCNGG	4 cut(s)	218, 1411, 2465, 2504
BmrI	ACTGGG	3 cut(s)	672, 2919, 4030
BmsI	GCATC	4 cut(s)	37, 1822, 2145, 2284
BmuI	ACTGGG	3 cut(s)	672, 2919, 4030
BoxI	GACNNNNGTC	1 cut(s)	2130
BpiI	GAAGAC	4 cut(s)	561, 2053, 2447, 4012
BplI	GAGNNNNNCTC	4 cut(s)	176, 208, 2423, 2455
BpmI	CTGGAG	3 cut(s)	840, 3087, 3736
Bpu10I	CCTNAGC	3 cut(s)	1629, 1945, 3876
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	1 cut(s)	1892
BpuMI	CCSGG	1 cut(s)	2504
BsaAI	YACGTR	2 cut(s)	400, 2647
BsaHI	GRCGYC	1 cut(s)	4005
BsaI	GGTCTC	5 cut(s)	519, 1253, 1675, 2766, 3500
BsaJI	CCNNGG	7 cut(s)	366, 1409, 1462, 2463, 2583, 2613, 3656
BsaWI	WCCGGW	7 cut(s)	256, 319, 848, 1094, 2566, 3095, 3341
BsaXI	ACNNNNNCTCC	4 cut(s)	1979, 2009, 2033, 2063
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 1147, 1747, 2005, 3394, 3892
Bse118I	RCCGGY	3 cut(s)	1593, 3341, 3840
Bse1I	ACTGG	7 cut(s)	335, 667, 1105, 1980, 2914, 3352, 4036
Bse21I	CCTNAGG	2 cut(s)	1665, 3912
Bse3DI	GCAATG	7 cut(s)	910, 936, 1372, 2010, 3157, 3183, 3619
BseAI	TCCGGA	3 cut(s)	256, 319, 2566
BseBI	CCWGG	3 cut(s)	218, 1411, 2465
BseDI	CCNNGG	7 cut(s)	366, 1409, 1462, 2463, 2583, 2613, 3656
BseGI	GGATG	5 cut(s)	550, 1574, 2136, 2712, 2797
BseLI	CCNNNNNNNGG	6 cut(s)	204, 1147, 1747, 2005, 3394, 3892
BseMI	GCAATG	7 cut(s)	910, 936, 1372, 2010, 3157, 3183, 3619
BseNI	ACTGG	7 cut(s)	335, 667, 1105, 1980, 2914, 3352, 4036
BseX3I	CGGCCG	2 cut(s)	180, 2427
BseXI	GCAGC	1 cut(s)	2795
BsgI	GTGCAG	2 cut(s)	529, 2776
Bsh1236I	CGCG	3 cut(s)	783, 3030, 3578
Bsh1285I	CGRYCG	3 cut(s)	183, 2430, 3975
BshNI	GGYRCC	5 cut(s)	1295, 1433, 1611, 3542, 3680
BshTI	ACCGGT	1 cut(s)	3341
BsiEI	CGRYCG	3 cut(s)	183, 2430, 3975
BsiHKAI	GWGCWC	4 cut(s)	189, 826, 2436, 3073
BsiHKCI	CYCGRG	1 cut(s)	386
BslFI	GGGAC	2 cut(s)	1182, 1480
BslI	CCNNNNNNNGG	6 cut(s)	204, 1147, 1747, 2005, 3394, 3892
BsmBI	CGTCTC	6 cut(s)	196, 244, 1034, 2443, 2491, 3281
BsmFI	GGGAC	2 cut(s)	1182, 1480
BsmI	GAATGC	1 cut(s)	2115
Bso31I	GGTCTC	5 cut(s)	519, 1253, 1675, 2766, 3500
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	4 cut(s)	189, 826, 2436, 3073
Bsp13I	TCCGGA	3 cut(s)	256, 319, 2566
Bsp19I	CCATGG	2 cut(s)	366, 2613
Bsp68I	TCGCGA	2 cut(s)	783, 3030
BspACI	CCGC	9 cut(s)	179, 312, 420, 472, 2426, 2559, 2667, 2719, 3938
BspEI	TCCGGA	3 cut(s)	256, 319, 2566
BspFNI	CGCG	3 cut(s)	783, 3030, 3578
BspLI	GGNNCC	7 cut(s)	330, 1297, 1435, 1613, 2577, 3544, 3682
BspMAI	CTGCAG	3 cut(s)	292, 694, 2539
BspMI	ACCTGC	2 cut(s)	501, 2748
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	5 cut(s)	1295, 1433, 1611, 3542, 3680
BspTNI	GGTCTC	5 cut(s)	519, 1253, 1675, 2766, 3500
BsrDI	GCAATG	7 cut(s)	910, 936, 1372, 2010, 3157, 3183, 3619
BsrFI	RCCGGY	3 cut(s)	1593, 3341, 3840
BsrI	ACTGG	7 cut(s)	335, 667, 1105, 1980, 2914, 3352, 4036
BssAI	RCCGGY	3 cut(s)	1593, 3341, 3840
BssECI	CCNNGG	7 cut(s)	366, 1409, 1462, 2463, 2583, 2613, 3656
BssNAI	GTATAC	2 cut(s)	75, 2322
BssNI	GRCGYC	1 cut(s)	4005
BssT1I	CCWWGG	4 cut(s)	366, 1462, 2613, 3656
Bst1107I	GTATAC	2 cut(s)	75, 2322
Bst2UI	CCWGG	3 cut(s)	218, 1411, 2465
Bst6I	CTCTTC	7 cut(s)	199, 1305, 2204, 2446, 3552, 4004, 4051
BstACI	GRCGYC	1 cut(s)	4005
BstBAI	YACGTR	2 cut(s)	400, 2647
BstBI	TTCGAA	1 cut(s)	201
BstDSI	CCRYGG	3 cut(s)	366, 2583, 2613
BstENI	CCTNNNNNAGG	3 cut(s)	1145, 3392, 3890
BstF5I	GGATG	5 cut(s)	550, 1574, 2136, 2712, 2797
BstFNI	CGCG	3 cut(s)	783, 3030, 3578
BstHHI	GCGC	1 cut(s)	3943
BstMCI	CGRYCG	3 cut(s)	183, 2430, 3975
BstMWI	GCNNNNNNNGC	8 cut(s)	926, 1253, 1374, 1909, 3173, 3500, 3621, 3821
BstNI	CCWGG	3 cut(s)	218, 1411, 2465
BstNSI	RCATGY	6 cut(s)	448, 760, 898, 3007, 3145, 4072
BstPAI	GACNNNNGTC	1 cut(s)	2130
BstSCI	CCNGG	4 cut(s)	216, 1409, 2463, 2502
BstSFI	CTRYAG	9 cut(s)	115, 288, 690, 1335, 2166, 2362, 2535, 2937, 3582
BstUI	CGCG	3 cut(s)	783, 3030, 3578
BstV1I	GCAGC	1 cut(s)	2795
BstV2I	GAAGAC	4 cut(s)	561, 2053, 2447, 4012
BstX2I	RGATCY	3 cut(s)	1159, 1737, 3406
BstYI	RGATCY	3 cut(s)	1159, 1737, 3406
BstZ17I	GTATAC	2 cut(s)	75, 2322
BstZI	CGGCCG	2 cut(s)	180, 2427
Bsu36I	CCTNAGG	2 cut(s)	1665, 3912
BsuI	GTATCC	2 cut(s)	856, 3103
BtgI	CCRYGG	3 cut(s)	366, 2583, 2613
BtrI	CACGTC	2 cut(s)	298, 2545
BtsCI	GGATG	5 cut(s)	550, 1574, 2136, 2712, 2797
BtsI	GCAGTG	3 cut(s)	699, 1435, 3682
BtuMI	TCGCGA	2 cut(s)	783, 3030
BveI	ACCTGC	2 cut(s)	501, 2748
CaiI	CAGNNNCTG	1 cut(s)	3759
CfoI	GCGC	1 cut(s)	3943
Cfr10I	RCCGGY	3 cut(s)	1593, 3341, 3840
Cfr13I	GGNCC	9 cut(s)	234, 1082, 1187, 1459, 2481, 3329, 3434, 3706, 3954
CseI	GACGC	5 cut(s)	665, 1743, 2912, 3567, 4013
Csp6I	GTAC	9 cut(s)	573, 1098, 1281, 1510, 1660, 2820, 3345, 3528, 3907
CspAI	ACCGGT	1 cut(s)	3341
CviQI	GTAC	9 cut(s)	573, 1098, 1281, 1510, 1660, 2820, 3345, 3528, 3907
DrdI	GACNNNNNNGTC	2 cut(s)	1457, 3704
DseDI	GACNNNNNNGTC	2 cut(s)	1457, 3704
EaeI	YGGCCR	3 cut(s)	180, 2427, 3922
EagI	CGGCCG	2 cut(s)	180, 2427
Eam1104I	CTCTTC	7 cut(s)	199, 1305, 2204, 2446, 3552, 4004, 4051
EarI	CTCTTC	7 cut(s)	199, 1305, 2204, 2446, 3552, 4004, 4051
Ecl136II	GAGCTC	4 cut(s)	187, 824, 2434, 3071
EclXI	CGGCCG	2 cut(s)	180, 2427
Eco130I	CCWWGG	4 cut(s)	366, 1462, 2613, 3656
Eco147I	AGGCCT	2 cut(s)	1414, 3661
Eco24I	GRGCYC	4 cut(s)	189, 826, 2436, 3073
Eco31I	GGTCTC	5 cut(s)	519, 1253, 1675, 2766, 3500
Eco47I	GGWCC	5 cut(s)	1187, 1459, 3434, 3706, 3954
Eco52I	CGGCCG	2 cut(s)	180, 2427
Eco53kI	GAGCTC	4 cut(s)	187, 824, 2434, 3071
Eco72I	CACGTG	2 cut(s)	400, 2647
Eco81I	CCTNAGG	2 cut(s)	1665, 3912
Eco88I	CYCGRG	1 cut(s)	386
EcoICRI	GAGCTC	4 cut(s)	187, 824, 2434, 3071
EcoNI	CCTNNNNNAGG	3 cut(s)	1145, 3392, 3890
EcoRI	GAATTC	3 cut(s)	1387, 3634, 3959
EcoRII	CCWGG	3 cut(s)	216, 1409, 2463
EcoT14I	CCWWGG	4 cut(s)	366, 1462, 2613, 3656
EcoT22I	ATGCAT	5 cut(s)	30, 733, 2277, 2980, 3817
EcoT38I	GRGCYC	4 cut(s)	189, 826, 2436, 3073
ErhI	CCWWGG	4 cut(s)	366, 1462, 2613, 3656
Esp3I	CGTCTC	6 cut(s)	196, 244, 1034, 2443, 2491, 3281
FaqI	GGGAC	2 cut(s)	1182, 1480
FbaI	TGATCA	2 cut(s)	855, 3102
FblI	GTMKAC	4 cut(s)	74, 294, 2321, 2541
Fnu4HI	GCNGC	4 cut(s)	180, 2427, 2784, 3939
FokI	GGATG	5 cut(s)	557, 1581, 2123, 2719, 2804
FriOI	GRGCYC	4 cut(s)	189, 826, 2436, 3073
Fsp4HI	GCNGC	4 cut(s)	180, 2427, 2784, 3939
GlaI	GCGC	1 cut(s)	3942
GluI	GCNGC	4 cut(s)	180, 2427, 2784, 3939
GsuI	CTGGAG	3 cut(s)	840, 3087, 3736
HgaI	GACGC	5 cut(s)	665, 1743, 2912, 3567, 4013
HhaI	GCGC	1 cut(s)	3943
Hin1I	GRCGYC	1 cut(s)	4005
Hin6I	GCGC	1 cut(s)	3941
HinP1I	GCGC	1 cut(s)	3941
HincII	GTYRAC	4 cut(s)	43, 295, 2290, 2542
HindII	GTYRAC	4 cut(s)	43, 295, 2290, 2542
HindIII	AAGCTT	2 cut(s)	392, 2639
HinfI	GANTC	6 cut(s)	433, 478, 2680, 2725, 3917, 4017
Hpy166II	GTNNAC	6 cut(s)	43, 75, 295, 2290, 2322, 2542
Hpy8I	GTNNAC	6 cut(s)	43, 75, 295, 2290, 2322, 2542
Hpy99I	CGWCG	7 cut(s)	95, 299, 681, 2342, 2546, 3934, 4007
HpyAV	CCTTC	8 cut(s)	208, 804, 880, 2099, 2455, 2566, 3051, 3127
HpyF10VI	GCNNNNNNNGC	8 cut(s)	926, 1253, 1374, 1909, 3173, 3500, 3621, 3821
Hsp92I	GRCGYC	1 cut(s)	4005
HspAI	GCGC	1 cut(s)	3941
Kpn2I	TCCGGA	3 cut(s)	256, 319, 2566
Ksp22I	TGATCA	2 cut(s)	855, 3102
LmnI	GCTCC	7 cut(s)	328, 666, 821, 2575, 2913, 3068, 4101
Lsp1109I	GCAGC	1 cut(s)	2795
LweI	GCATC	4 cut(s)	37, 1822, 2145, 2284
MaeIII	GTNAC	9 cut(s)	430, 656, 890, 1804, 2149, 2677, 2903, 3137, 3337
MflI	RGATCY	3 cut(s)	1159, 1737, 3406
MhlI	GDGCHC	4 cut(s)	189, 826, 2436, 3073
MlsI	TGGCCA	1 cut(s)	3924
MluI	ACGCGT	1 cut(s)	3576
MluNI	TGGCCA	1 cut(s)	3924
MlyI	GAGTC	3 cut(s)	427, 2674, 4026
MmeI	TCCRAC	3 cut(s)	1364, 2019, 3611
Mox20I	TGGCCA	1 cut(s)	3924
Mph1103I	ATGCAT	5 cut(s)	30, 733, 2277, 2980, 3817
MroI	TCCGGA	3 cut(s)	256, 319, 2566
MroXI	GAANNNNTTC	2 cut(s)	207, 2048
MscI	TGGCCA	1 cut(s)	3924
MseI	TTAA	4 cut(s)	63, 624, 2310, 2871
MslI	CAYNNNNRTG	5 cut(s)	226, 1609, 1818, 2473, 3856
Msp20I	TGGCCA	1 cut(s)	3924
MspA1I	CMGCKG	2 cut(s)	314, 2561
MspR9I	CCNGG	4 cut(s)	218, 1411, 2465, 2504
Mva1269I	GAATGC	1 cut(s)	2115
MvaI	CCWGG	3 cut(s)	218, 1411, 2465
MvnI	CGCG	3 cut(s)	783, 3030, 3578
MwoI	GCNNNNNNNGC	8 cut(s)	926, 1253, 1374, 1909, 3173, 3500, 3621, 3821
NciI	CCSGG	1 cut(s)	2504
NcoI	CCATGG	2 cut(s)	366, 2613
NlaIV	GGNNCC	7 cut(s)	330, 1297, 1435, 1613, 2577, 3544, 3682
NmeAIII	GCCGAG	4 cut(s)	208, 901, 2455, 3148
NmuCI	GTSAC	8 cut(s)	430, 656, 890, 2149, 2677, 2903, 3137, 3337
NruI	TCGCGA	2 cut(s)	783, 3030
NsiI	ATGCAT	5 cut(s)	30, 733, 2277, 2980, 3817
NspI	RCATGY	6 cut(s)	448, 760, 898, 3007, 3145, 4072
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	2 cut(s)	1609, 3856
PaeI	GCATGC	1 cut(s)	448
PceI	AGGCCT	2 cut(s)	1414, 3661
PciI	ACATGT	2 cut(s)	894, 3141
PctI	GAATGC	1 cut(s)	2115
PdmI	GAANNNNTTC	2 cut(s)	207, 2048
PfeI	GAWTC	3 cut(s)	478, 2725, 3917
PfoI	TCCNGGA	1 cut(s)	2502
PinAI	ACCGGT	1 cut(s)	3341
PkrI	GCNGC	4 cut(s)	181, 2428, 2785, 3940
Ple19I	CGATCG	1 cut(s)	3975
PleI	GAGTC	3 cut(s)	427, 2674, 4025
PmaCI	CACGTG	2 cut(s)	400, 2647
PmlI	CACGTG	2 cut(s)	400, 2647
PpsI	GAGTC	3 cut(s)	427, 2674, 4025
Ppu21I	YACGTR	2 cut(s)	400, 2647
PscI	ACATGT	2 cut(s)	894, 3141
PshAI	GACNNNNGTC	1 cut(s)	2130
PshBI	ATTAAT	2 cut(s)	63, 2310
PsiI	TTATAA	1 cut(s)	1917
Psp124BI	GAGCTC	4 cut(s)	189, 826, 2436, 3073
Psp6I	CCWGG	3 cut(s)	216, 1409, 2463
PspCI	CACGTG	2 cut(s)	400, 2647
PspGI	CCWGG	3 cut(s)	216, 1409, 2463
PspN4I	GGNNCC	7 cut(s)	330, 1297, 1435, 1613, 2577, 3544, 3682
PspPI	GGNCC	9 cut(s)	234, 1082, 1187, 1459, 2481, 3329, 3434, 3706, 3954
PstI	CTGCAG	3 cut(s)	292, 694, 2539
PstNI	CAGNNNCTG	1 cut(s)	3759
PsuI	RGATCY	3 cut(s)	1159, 1737, 3406
PvuI	CGATCG	1 cut(s)	3975
RruI	TCGCGA	2 cut(s)	783, 3030
RsaI	GTAC	9 cut(s)	574, 1099, 1282, 1511, 1661, 2821, 3346, 3529, 3908
RsaNI	GTAC	9 cut(s)	573, 1098, 1281, 1510, 1660, 2820, 3345, 3528, 3907
RseI	CAYNNNNRTG	5 cut(s)	226, 1609, 1818, 2473, 3856
SacI	GAGCTC	4 cut(s)	189, 826, 2436, 3073
SalI	GTCGAC	2 cut(s)	293, 2540
SaqAI	TTAA	4 cut(s)	63, 624, 2310, 2871
SatI	GCNGC	4 cut(s)	180, 2427, 2784, 3939
Sau96I	GGNCC	9 cut(s)	234, 1082, 1187, 1459, 2481, 3329, 3434, 3706, 3954
ScaI	AGTACT	1 cut(s)	1511
SchI	GAGTC	3 cut(s)	427, 2674, 4026
ScrFI	CCNGG	4 cut(s)	218, 1411, 2465, 2504
SduI	GDGCHC	4 cut(s)	189, 826, 2436, 3073
SfaNI	GCATC	4 cut(s)	37, 1822, 2145, 2284
SfcI	CTRYAG	9 cut(s)	115, 288, 690, 1335, 2166, 2362, 2535, 2937, 3582
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	5 cut(s)	1187, 1459, 3434, 3706, 3954
SmiMI	CAYNNNNRTG	5 cut(s)	226, 1609, 1818, 2473, 3856
SmlI	CTYRAG	1 cut(s)	1907
SmoI	CTYRAG	1 cut(s)	1907
SphI	GCATGC	1 cut(s)	448
SseBI	AGGCCT	2 cut(s)	1414, 3661
SsiI	CCGC	9 cut(s)	179, 312, 420, 472, 2426, 2559, 2667, 2719, 3938
SstI	GAGCTC	4 cut(s)	189, 826, 2436, 3073
StuI	AGGCCT	2 cut(s)	1414, 3661
StyD4I	CCNGG	4 cut(s)	216, 1409, 2463, 2502
StyI	CCWWGG	4 cut(s)	366, 1462, 2613, 3656
TatI	WGTACW	1 cut(s)	1509
TauI	GCSGC	3 cut(s)	182, 2429, 3941
TfiI	GAWTC	3 cut(s)	478, 2725, 3917
Tru1I	TTAA	4 cut(s)	63, 624, 2310, 2871
Tru9I	TTAA	4 cut(s)	63, 624, 2310, 2871
TseFI	GTSAC	8 cut(s)	430, 656, 890, 2149, 2677, 2903, 3137, 3337
TseI	GCWGC	1 cut(s)	2783
Tsp45I	GTSAC	8 cut(s)	430, 656, 890, 2149, 2677, 2903, 3137, 3337
TspGWI	ACGGA	2 cut(s)	1763, 2326
VpaK11BI	GGWCC	5 cut(s)	1187, 1459, 3434, 3706, 3954
VspI	ATTAAT	2 cut(s)	63, 2310
XagI	CCTNNNNNAGG	3 cut(s)	1145, 3392, 3890
XapI	RAATTY	7 cut(s)	992, 1387, 1675, 1847, 3239, 3634, 3959
XbaI	TCTAGA	1 cut(s)	2926
XceI	RCATGY	6 cut(s)	448, 760, 898, 3007, 3145, 4072
XmiI	GTMKAC	4 cut(s)	74, 294, 2321, 2541
XmnI	GAANNNNTTC	2 cut(s)	207, 2048
ZrmI	AGTACT	1 cut(s)	1511
Zsp2I	ATGCAT	5 cut(s)	30, 733, 2277, 2980, 3817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.