Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Reverse (-)

59504390 .. 59519681

Gene Structure 15292 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009882

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGATCAGAGTTCTAACGACCCTATGCATATCTGCCATGTCAACAAGCTCACAATCTTCATTAATCGAACGTATACAGTCATACACTCCGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTTTCTTCTTCCATGACACCAAAACACCCATCTTACCATCTCTTATGGTCTTTGCCGCCGAGCTCGCATATCGGTGGAGACCCGTCTCTCGAACTGTGTTTCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAGTTGATGTGTTCATTTGCACCGCTGATCCGGAGAAGGAGCCACCCGTTCAGGTGATGAACACTGTAATATCAGCCACGGCACTCGACTATCCACCCGAGAAGCTTCGCGTGTATTTGTCAGATGATGCCAGTGCTAATGTGACTCTGAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTATAAGATCAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGCAGCAGAGGATGAGAATGGAGAAGGTGATTTGGGGGGTACTGATTTCATACAAGAGAGACAAACTGTTCAGGAAAAATATGAGGTGTTTGTGGAAAGAGTGAGAGAATACGCAAGGAACAGTGACACTGGGAGCAGTAAGCGTGGGGATCATTCTGCAGTCGTTGACGTGATACAAGAAAGTTCTAGTAATCACGCATTTGAAGAAAATGAGGCAAAAAACATGTCTCTCCTTGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTTCTTAGGGTATCCGGTGTGATCAGTAATTCTCCCATCATATTAGGGCTTGATTGTGACATGTATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCACTTGTGCAATTCCCTCAGATATTCCACAACATCAGTAAGAATGACATCTACGACAGTCAGTTGAGAGAGACGTTTTCGGTGCTATGGCAAGGTTTTGATGGACTACAAGGGCCATGCGTGACCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAGGAACATGTGGATCTTATGGAACTTAGACAATCTATTGGTCCATCAAGTGAGTTCATAAAATCCCTGCTTGGAAATTACAATCCTAATATTAAAATGGCACAGCTAGCTGAGACCCAACAACTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGTGGAAGATTATTTCACAGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTTTATTGCAATCCAGCAAGGCCTCAGTTCTTGGGCAGTGGCACCACTAATTTGAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCTGGGTTGGTTGATGTTGCCATATGTAGATACTGCCCTCTTATATATGGTCTTTCTAAAATGTCTTTCCTTGAAAGTATGTGCTATGCATGGCTAGCAATTTACCCTATTTGCTGGTTTTTCTCACTCTGGTGCTTTGCAACTATACCTCAGCTTTGCCTAGTCAATGGCATTTCGCTGTACCCTAAGGTCTCAAGTTCCTTTTTTTGGATATTTTCTCTTGTATTCCTCTCATCTGTTTTGAGACATTTACACGAGGTCCTCACAACAGAAGCGTCATTACAACATTGGATATACGAGCAAAGAATATGGATGATGAAGGCAATTACATCTCACTTATATGGTAGTCTTGATGCTTTGATGAAGAAATTTGGTTTGAGGGAAGCAAGTTTCTTCCCAACAAATAAAGCTGATGACGTTGAGCAACTTAAGCGTTACACCGAGGGGGAATTTGATTTCCAAACCTCAACACTTTTTCTTGTTCCATTGGCTTCACTGGTTATCTTGAACATGGCCTCTCTTTGTGTGGGCATTAGCAGAGTGATCTTTCAGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATCCCATTTTATGCGGTGGTGGTCAATTACCCTATTATAGAAGGAATGCTAATAAGGAAAGACAGTGGTCGCATTCCACCATCAGTCACCCTGTTGTCTGCTACAGCTTCAATCATTTTCTGCCTTTTGGGTTCCATTATTTTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

728

Amino Acids

82.38

Weight (kDa)

6.13

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	88 - 370	6.2e-76	Cellulose synthase
Cellulose_synt	PF03552	373 - 721	1.7e-58	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1427
Acc36I	ACCTGC	1 cut(s)	471
AccB1I	GGYRCC	2 cut(s)	1265, 1403
AccI	GTMKAC	1 cut(s)	74
AccII	CGCG	3 cut(s)	369, 753, 1301
AccIII	TCCGGA	2 cut(s)	226, 289
AciI	CCGC	4 cut(s)	180, 282, 442, 2048
AclWI	GGATC	6 cut(s)	12, 281, 660, 872, 911, 1137
AcsI	RAATTY	3 cut(s)	1357, 1817, 1898
AfaI	GTAC	4 cut(s)	544, 1069, 1252, 1631
AfiI	CCNNNNNNNGG	2 cut(s)	1117, 1656
AflII	CTTAAG	1 cut(s)	1877
AflIII	ACRYGT	4 cut(s)	726, 864, 1123, 1299
AgeI	ACCGGT	1 cut(s)	1064
AgsI	TTSAA	6 cut(s)	707, 784, 1417, 1523, 1957, 2145
AjiI	CACGTC	1 cut(s)	673
AjuI	GAANNNNNNNTTGG	2 cut(s)	1409, 1441
AleI	CACNNNNGTG	1 cut(s)	1579
AloI	GAACNNNNNNTCC	2 cut(s)	208, 240
Alw21I	GWGCWC	2 cut(s)	189, 796
AlwI	GGATC	6 cut(s)	12, 281, 660, 872, 911, 1137
Ama87I	CYCGRG	1 cut(s)	356
Aor13HI	TCCGGA	2 cut(s)	226, 289
AoxI	GGCC	3 cut(s)	1052, 1382, 1962
ApeKI	GCWGC	1 cut(s)	506
ApoI	RAATTY	3 cut(s)	1357, 1817, 1898
ArsI	GACNNNNNNTTYG	2 cut(s)	713, 745
AseI	ATTAAT	1 cut(s)	63
AsiGI	ACCGGT	1 cut(s)	1064
AspS9I	GGNCC	4 cut(s)	1052, 1157, 1429, 1708
AsuHPI	GGTGA	5 cut(s)	325, 542, 921, 1289, 2113
AsuNHI	GCTAGC	4 cut(s)	937, 1222, 1334, 1543
AvaI	CYCGRG	1 cut(s)	356
AvaII	GGWCC	3 cut(s)	1157, 1429, 1708
AxyI	CCTNAGG	1 cut(s)	1635
BanI	GGYRCC	2 cut(s)	1265, 1403
BanII	GRGCYC	2 cut(s)	189, 796
BarI	GAAGNNNNNNTAC	2 cut(s)	1713, 1745
BauI	CACGAG	1 cut(s)	1703
BbsI	GAAGAC	1 cut(s)	2023
Bbv12I	GWGCWC	2 cut(s)	189, 796
BbvCI	CCTCAGC	1 cut(s)	1599
BbvI	GCAGC	1 cut(s)	518
BccI	CCATC	9 cut(s)	161, 169, 783, 848, 1034, 1168, 1256, 1437, 2122
BceAI	ACGGC	1 cut(s)	354
BciVI	GTATCC	1 cut(s)	826
BclI	TGATCA	1 cut(s)	825
BfaI	CTAG	7 cut(s)	690, 938, 1223, 1241, 1335, 1544, 1610
BfmI	CTRYAG	5 cut(s)	115, 258, 660, 1305, 2136
BfrI	CTTAAG	1 cut(s)	1877
BfuAI	ACCTGC	1 cut(s)	471
BfuI	GTATCC	1 cut(s)	826
BisI	GCNGC	2 cut(s)	180, 507
BlsI	GCNGC	2 cut(s)	181, 508
Bme18I	GGWCC	3 cut(s)	1157, 1429, 1708
BmeT110I	CYCGRG	1 cut(s)	356
BmgBI	CACGTC	1 cut(s)	673
BmgT120I	GGNCC	4 cut(s)	1052, 1157, 1429, 1708
BmiI	GGNNCC	4 cut(s)	300, 1267, 1405, 2167
BmrI	ACTGGG	1 cut(s)	642
BmsI	GCATC	2 cut(s)	376, 1792
BmtI	GCTAGC	4 cut(s)	941, 1226, 1338, 1547
BmuI	ACTGGG	1 cut(s)	642
BoxI	GACNNNNGTC	1 cut(s)	2100
BpiI	GAAGAC	1 cut(s)	2023
BpmI	CTGGAG	1 cut(s)	810
Bpu10I	CCTNAGC	1 cut(s)	1599
BpuEI	CTTGAG	1 cut(s)	1627
BsaI	GGTCTC	4 cut(s)	196, 489, 1223, 1645
BsaJI	CCNNGG	3 cut(s)	336, 1432, 1890
BsaWI	WCCGGW	4 cut(s)	226, 289, 818, 1064
BsaXI	ACNNNNNCTCC	2 cut(s)	2003, 2033
Bsc4I	CCNNNNNNNGG	2 cut(s)	1117, 1656
Bse118I	RCCGGY	1 cut(s)	1064
Bse1I	ACTGG	4 cut(s)	390, 637, 1075, 1950
Bse21I	CCTNAGG	1 cut(s)	1635
Bse3DI	GCAATG	3 cut(s)	880, 906, 1342
BseAI	TCCGGA	2 cut(s)	226, 289
BseDI	CCNNGG	3 cut(s)	336, 1432, 1890
BseGI	GGATG	3 cut(s)	520, 1767, 2034
BseLI	CCNNNNNNNGG	2 cut(s)	1117, 1656
BseMI	GCAATG	3 cut(s)	880, 906, 1342
BseMII	CTCAG	5 cut(s)	516, 971, 1218, 1400, 1613
BseNI	ACTGG	4 cut(s)	390, 637, 1075, 1950
BseXI	GCAGC	1 cut(s)	518
BsgI	GTGCAG	1 cut(s)	499
Bsh1236I	CGCG	3 cut(s)	369, 753, 1301
BshFI	GGCC	3 cut(s)	1054, 1384, 1964
BshNI	GGYRCC	2 cut(s)	1265, 1403
BshTI	ACCGGT	1 cut(s)	1064
BsiHKAI	GWGCWC	2 cut(s)	189, 796
BsiHKCI	CYCGRG	1 cut(s)	356
BsiSI	CCGG	5 cut(s)	227, 239, 290, 819, 1065
BslFI	GGGAC	1 cut(s)	1450
BslI	CCNNNNNNNGG	2 cut(s)	1117, 1656
BsmBI	CGTCTC	2 cut(s)	214, 1004
BsmFI	GGGAC	1 cut(s)	1450
BsmI	GAATGC	2 cut(s)	2085, 2106
BsnI	GGCC	3 cut(s)	1054, 1384, 1964
Bso31I	GGTCTC	4 cut(s)	196, 489, 1223, 1645
BsoBI	CYCGRG	1 cut(s)	356
Bsp1286I	GDGCHC	2 cut(s)	189, 796
Bsp13I	TCCGGA	2 cut(s)	226, 289
Bsp143I	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
Bsp68I	TCGCGA	1 cut(s)	753
BspACI	CCGC	4 cut(s)	180, 282, 442, 2048
BspANI	GGCC	3 cut(s)	1054, 1384, 1964
BspCNI	CTCAG	5 cut(s)	515, 970, 1219, 1399, 1612
BspEI	TCCGGA	2 cut(s)	226, 289
BspFNI	CGCG	3 cut(s)	369, 753, 1301
BspLI	GGNNCC	4 cut(s)	300, 1267, 1405, 2167
BspMAI	CTGCAG	2 cut(s)	262, 664
BspMI	ACCTGC	1 cut(s)	471
BspOI	GCTAGC	4 cut(s)	941, 1226, 1338, 1547
BspPI	GGATC	6 cut(s)	12, 281, 660, 872, 911, 1137
BspT107I	GGYRCC	2 cut(s)	1265, 1403
BspTI	CTTAAG	1 cut(s)	1877
BspTNI	GGTCTC	4 cut(s)	196, 489, 1223, 1645
BsrDI	GCAATG	3 cut(s)	880, 906, 1342
BsrFI	RCCGGY	1 cut(s)	1064
BsrI	ACTGG	4 cut(s)	390, 637, 1075, 1950
BssAI	RCCGGY	1 cut(s)	1064
BssECI	CCNNGG	3 cut(s)	336, 1432, 1890
BssMI	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
BssNAI	GTATAC	1 cut(s)	75
BssSI	CACGAG	1 cut(s)	1703
BssT1I	CCWWGG	1 cut(s)	1432
Bst1107I	GTATAC	1 cut(s)	75
Bst2BI	CACGAG	1 cut(s)	1703
Bst4CI	ACNGT	7 cut(s)	79, 220, 325, 571, 626, 998, 2099
Bst6I	CTCTTC	1 cut(s)	1275
BstAFI	CTTAAG	1 cut(s)	1877
BstC8I	GCNNGC	7 cut(s)	189, 897, 939, 1224, 1336, 1340, 1545
BstDEI	CTNAG	8 cut(s)	502, 809, 957, 1142, 1227, 1386, 1599, 1635
BstDSI	CCRYGG	1 cut(s)	336
BstENI	CCTNNNNNAGG	1 cut(s)	1115
BstF5I	GGATG	3 cut(s)	520, 1767, 2034
BstFNI	CGCG	3 cut(s)	369, 753, 1301
BstKTI	GATC	9 cut(s)	7, 289, 474, 655, 828, 880, 919, 1132, 1995
BstMBI	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
BstMWI	GCNNNNNNNGC	6 cut(s)	188, 896, 1223, 1344, 1544, 1879
BstNSI	RCATGY	3 cut(s)	730, 868, 1127
BstPAI	GACNNNNGTC	1 cut(s)	2100
BstSFI	CTRYAG	5 cut(s)	115, 258, 660, 1305, 2136
BstUI	CGCG	3 cut(s)	369, 753, 1301
BstV1I	GCAGC	1 cut(s)	518
BstV2I	GAAGAC	1 cut(s)	2023
BstX2I	RGATCY	1 cut(s)	1129
BstYI	RGATCY	1 cut(s)	1129
BstZ17I	GTATAC	1 cut(s)	75
Bsu36I	CCTNAGG	1 cut(s)	1635
BsuI	GTATCC	1 cut(s)	826
BsuRI	GGCC	3 cut(s)	1054, 1384, 1964
BtgI	CCRYGG	1 cut(s)	336
BtrI	CACGTC	1 cut(s)	673
BtsCI	GGATG	3 cut(s)	520, 1767, 2034
BtsI	GCAGTG	1 cut(s)	1405
BtsIMutI	CAGTG	7 cut(s)	321, 397, 630, 631, 1405, 1943, 2104
BtuMI	TCGCGA	1 cut(s)	753
BveI	ACCTGC	1 cut(s)	471
Cac8I	GCNNGC	7 cut(s)	189, 897, 939, 1224, 1336, 1340, 1545
Cfr10I	RCCGGY	1 cut(s)	1064
Cfr13I	GGNCC	4 cut(s)	1052, 1157, 1429, 1708
CseI	GACGC	2 cut(s)	1290, 1713
Csp6I	GTAC	4 cut(s)	543, 1068, 1251, 1630
CspAI	ACCGGT	1 cut(s)	1064
CviAII	CATG	9 cut(s)	38, 137, 727, 770, 865, 1056, 1124, 1539, 1960
CviQI	GTAC	4 cut(s)	543, 1068, 1251, 1630
DdeI	CTNAG	8 cut(s)	502, 809, 957, 1142, 1227, 1386, 1599, 1635
DpnI	GATC	9 cut(s)	6, 288, 473, 654, 827, 879, 918, 1131, 1994
DpnII	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
DrdI	GACNNNNNNGTC	1 cut(s)	1427
DseDI	GACNNNNNNGTC	1 cut(s)	1427
Eam1104I	CTCTTC	1 cut(s)	1275
EarI	CTCTTC	1 cut(s)	1275
Ecl136II	GAGCTC	2 cut(s)	187, 794
Eco130I	CCWWGG	1 cut(s)	1432
Eco147I	AGGCCT	1 cut(s)	1384
Eco24I	GRGCYC	2 cut(s)	189, 796
Eco31I	GGTCTC	4 cut(s)	196, 489, 1223, 1645
Eco47I	GGWCC	3 cut(s)	1157, 1429, 1708
Eco53kI	GAGCTC	2 cut(s)	187, 794
Eco81I	CCTNAGG	1 cut(s)	1635
Eco88I	CYCGRG	1 cut(s)	356
EcoICRI	GAGCTC	2 cut(s)	187, 794
EcoNI	CCTNNNNNAGG	1 cut(s)	1115
EcoO109I	RGGNCCY	1 cut(s)	1708
EcoRI	GAATTC	1 cut(s)	1357
EcoT14I	CCWWGG	1 cut(s)	1432
EcoT22I	ATGCAT	2 cut(s)	30, 1540
EcoT38I	GRGCYC	2 cut(s)	189, 796
ErhI	CCWWGG	1 cut(s)	1432
Esp3I	CGTCTC	2 cut(s)	214, 1004
FaeI	CATG	9 cut(s)	41, 140, 730, 773, 868, 1059, 1127, 1542, 1963
FaqI	GGGAC	1 cut(s)	1450
FatI	CATG	9 cut(s)	37, 136, 726, 769, 864, 1055, 1123, 1538, 1959
FauNDI	CATATG	1 cut(s)	1472
FbaI	TGATCA	1 cut(s)	825
FblI	GTMKAC	1 cut(s)	74
Fnu4HI	GCNGC	2 cut(s)	180, 507
FokI	GGATG	3 cut(s)	527, 1774, 2021
FriOI	GRGCYC	2 cut(s)	189, 796
Fsp4HI	GCNGC	2 cut(s)	180, 507
FspBI	CTAG	7 cut(s)	690, 938, 1223, 1241, 1335, 1544, 1610
GluI	GCNGC	2 cut(s)	180, 507
GsuI	CTGGAG	1 cut(s)	810
HaeIII	GGCC	3 cut(s)	1054, 1384, 1964
HapII	CCGG	5 cut(s)	227, 239, 290, 819, 1065
HgaI	GACGC	2 cut(s)	1290, 1713
Hin1II	CATG	9 cut(s)	41, 140, 730, 773, 868, 1059, 1127, 1542, 1963
HincII	GTYRAC	2 cut(s)	43, 670
HindII	GTYRAC	2 cut(s)	43, 670
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	2 cut(s)	403, 448
HpaII	CCGG	5 cut(s)	227, 239, 290, 819, 1065
HphI	GGTGA	5 cut(s)	325, 542, 921, 1289, 2113
Hpy166II	GTNNAC	3 cut(s)	43, 75, 670
Hpy188I	TCNGA	4 cut(s)	9, 382, 408, 960
Hpy188III	TCNNGA	8 cut(s)	213, 227, 290, 575, 752, 1084, 1799, 1954
Hpy8I	GTNNAC	3 cut(s)	43, 75, 670
Hpy99I	CGWCG	1 cut(s)	95
HpyAV	CCTTC	5 cut(s)	289, 521, 774, 1762, 2069
HpyCH4III	ACNGT	7 cut(s)	79, 220, 325, 571, 626, 998, 2099
HpyCH4IV	ACGT	5 cut(s)	71, 431, 672, 1013, 1866
HpyF10VI	GCNNNNNNNGC	6 cut(s)	188, 896, 1223, 1344, 1544, 1879
HpyF3I	CTNAG	8 cut(s)	502, 809, 957, 1142, 1227, 1386, 1599, 1635
HpySE526I	ACGT	5 cut(s)	71, 431, 672, 1013, 1866
Hsp92II	CATG	9 cut(s)	41, 140, 730, 773, 868, 1059, 1127, 1542, 1963
Kpn2I	TCCGGA	2 cut(s)	226, 289
Ksp22I	TGATCA	1 cut(s)	825
Kzo9I	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
LmnI	GCTCC	3 cut(s)	298, 636, 791
Lsp1109I	GCAGC	1 cut(s)	518
LweI	GCATC	2 cut(s)	376, 1792
MaeI	CTAG	7 cut(s)	690, 938, 1223, 1241, 1335, 1544, 1610
MaeII	ACGT	5 cut(s)	71, 431, 672, 1013, 1866
MaeIII	GTNAC	6 cut(s)	400, 626, 860, 1060, 1883, 2119
MalI	GATC	9 cut(s)	6, 288, 473, 654, 827, 879, 918, 1131, 1994
MboI	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
MflI	RGATCY	1 cut(s)	1129
MhlI	GDGCHC	2 cut(s)	189, 796
MluI	ACGCGT	1 cut(s)	1299
MlyI	GAGTC	1 cut(s)	397
MmeI	TCCRAC	2 cut(s)	1334, 1989
Mph1103I	ATGCAT	2 cut(s)	30, 1540
MroI	TCCGGA	2 cut(s)	226, 289
MseI	TTAA	4 cut(s)	63, 1209, 1878, 2177
MslI	CAYNNNNRTG	3 cut(s)	196, 1579, 1788
MspA1I	CMGCKG	1 cut(s)	284
MspCI	CTTAAG	1 cut(s)	1877
MspI	CCGG	5 cut(s)	227, 239, 290, 819, 1065
Mva1269I	GAATGC	2 cut(s)	2085, 2106
MvnI	CGCG	3 cut(s)	369, 753, 1301
MwoI	GCNNNNNNNGC	6 cut(s)	188, 896, 1223, 1344, 1544, 1879
NdeI	CATATG	1 cut(s)	1472
NdeII	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
NheI	GCTAGC	4 cut(s)	937, 1222, 1334, 1543
NlaIII	CATG	9 cut(s)	41, 140, 730, 773, 868, 1059, 1127, 1542, 1963
NlaIV	GGNNCC	4 cut(s)	300, 1267, 1405, 2167
NmeAIII	GCCGAG	2 cut(s)	208, 871
NmuCI	GTSAC	5 cut(s)	400, 626, 860, 1060, 2119
NruI	TCGCGA	1 cut(s)	753
NsiI	ATGCAT	2 cut(s)	30, 1540
NspI	RCATGY	3 cut(s)	730, 868, 1127
OliI	CACNNNNGTG	1 cut(s)	1579
PceI	AGGCCT	1 cut(s)	1384
PciI	ACATGT	3 cut(s)	726, 864, 1123
PctI	GAATGC	2 cut(s)	2085, 2106
PfeI	GAWTC	1 cut(s)	448
PinAI	ACCGGT	1 cut(s)	1064
PkrI	GCNGC	2 cut(s)	181, 508
PleI	GAGTC	1 cut(s)	397
PpsI	GAGTC	1 cut(s)	397
PpuMI	RGGWCCY	1 cut(s)	1708
PscI	ACATGT	3 cut(s)	726, 864, 1123
PshAI	GACNNNNGTC	1 cut(s)	2100
PshBI	ATTAAT	1 cut(s)	63
Psp124BI	GAGCTC	2 cut(s)	189, 796
Psp5II	RGGWCCY	1 cut(s)	1708
PspN4I	GGNNCC	4 cut(s)	300, 1267, 1405, 2167
PspPI	GGNCC	4 cut(s)	1052, 1157, 1429, 1708
PspPPI	RGGWCCY	1 cut(s)	1708
PstI	CTGCAG	2 cut(s)	262, 664
PsuI	RGATCY	1 cut(s)	1129
RruI	TCGCGA	1 cut(s)	753
RsaI	GTAC	4 cut(s)	544, 1069, 1252, 1631
RsaNI	GTAC	4 cut(s)	543, 1068, 1251, 1630
RseI	CAYNNNNRTG	3 cut(s)	196, 1579, 1788
SacI	GAGCTC	2 cut(s)	189, 796
SaqAI	TTAA	4 cut(s)	63, 1209, 1878, 2177
SatI	GCNGC	2 cut(s)	180, 507
Sau3AI	GATC	9 cut(s)	4, 286, 471, 652, 825, 877, 916, 1129, 1992
Sau96I	GGNCC	4 cut(s)	1052, 1157, 1429, 1708
SchI	GAGTC	1 cut(s)	397
SduI	GDGCHC	2 cut(s)	189, 796
SfaNI	GCATC	2 cut(s)	376, 1792
SfcI	CTRYAG	5 cut(s)	115, 258, 660, 1305, 2136
SinI	GGWCC	3 cut(s)	1157, 1429, 1708
SmiMI	CAYNNNNRTG	3 cut(s)	196, 1579, 1788
SmlI	CTYRAG	2 cut(s)	1642, 1877
SmoI	CTYRAG	2 cut(s)	1642, 1877
SseBI	AGGCCT	1 cut(s)	1384
SsiI	CCGC	4 cut(s)	180, 282, 442, 2048
SspI	AATATT	1 cut(s)	1207
SspMI	CTAG	7 cut(s)	690, 938, 1223, 1241, 1335, 1544, 1610
SstI	GAGCTC	2 cut(s)	189, 796
StuI	AGGCCT	1 cut(s)	1384
StyI	CCWWGG	1 cut(s)	1432
TaaI	ACNGT	7 cut(s)	79, 220, 325, 571, 626, 998, 2099
TaiI	ACGT	5 cut(s)	74, 434, 675, 1016, 1869
TaqI	TCGA	3 cut(s)	67, 214, 345
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	1 cut(s)	448
Tru1I	TTAA	4 cut(s)	63, 1209, 1878, 2177
Tru9I	TTAA	4 cut(s)	63, 1209, 1878, 2177
TscAI	CASTG	7 cut(s)	328, 397, 631, 637, 1405, 1950, 2104
TseFI	GTSAC	5 cut(s)	400, 626, 860, 1060, 2119
TseI	GCWGC	1 cut(s)	506
Tsp45I	GTSAC	5 cut(s)	400, 626, 860, 1060, 2119
TspDTI	ATGAA	9 cut(s)	49, 262, 332, 541, 1162, 1272, 1781, 1826, 2023
TspGWI	ACGGA	1 cut(s)	79
TspRI	CASTG	7 cut(s)	328, 397, 631, 637, 1405, 1950, 2104
Vha464I	CTTAAG	1 cut(s)	1877
VpaK11BI	GGWCC	3 cut(s)	1157, 1429, 1708
VspI	ATTAAT	1 cut(s)	63
XagI	CCTNNNNNAGG	1 cut(s)	1115
XapI	RAATTY	3 cut(s)	1357, 1817, 1898
XceI	RCATGY	3 cut(s)	730, 868, 1127
XmiI	GTMKAC	1 cut(s)	74
XspI	CTAG	7 cut(s)	690, 938, 1223, 1241, 1335, 1544, 1610
Zsp2I	ATGCAT	2 cut(s)	30, 1540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.