Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

6495863 .. 6500167

Gene Structure 4305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36405

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGATCAGACTTCTAATGCCCCTCTGCATCTCTGCCATGTCAACAGGCTCACAATTTTCATCAATCGAACGTATGCAGTCATACACTCCATCGCTTTATCATTCCTGCTTTATTATCGAGCCTCTTTCTTCTTCCAGGACACCAAAACACCCATCTTTCCATCTCTTATTGTCTTTGCGGCCGAGCTCCTCTTTTCCTTCGAATGGCTTCTAACCCAGGCATATCGGTGGAGGCCCGTCTCTCGAACTACGTTCCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAATCGACGTGTTCATCTGCACCGCTGATCCTGATCTGGAGCCAACCGTGGCGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCGAGAAGCTTCACGTGTATTTGTCAGATGATGCCGGCGCTGATGTGACTCTGAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTATAAGATCAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGCAGCAAAGGATGAGAATGAAGATGGTGATTTTGGGGGTACTGATTTCATACAAGAGAGGCAAATTGTTCAGGAAAAATATGAGGTGTTTAAGGGAAGAGTAGGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTGGAGATCATTCTGCAGTTATTGAGGTGATACAAGAAAGTTCTAGTAATCATATTGAAGAAAATGAGGCGAAAGACATGCCTCTCCTTATTTATGTGTCTCGCGAGAAAAGACCTTCTCATTCCCATCATTTCAAGGCTGGAGCTATAAATGTTCTTCTTCGGGTATCCGGTGTGATAAGTAATTCTCCCTTCATATTAGGGCTTGACTGTGACACGAATTGCAATGATCCAAGTTCAGCTCGGCGAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTTCGCTATCATTTGTTCAATTCCCTCAGAAATTCCACAACATCAGTAAGAAAGACATCTACGACAGTCAATATAGATCGATCTTTAAGGTGCTATGGCAAGGTTTGGATGGACTTCAAGGGCCAGCCATGTGCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTTTGGAAAATCCCTAAAGGACGATCATAAGGACCTTATGGAACTTAGACAATCTGTTGGTCCGTCAAATGAGTTCATAACATCCCTGCTTGGAAACTACAATCCTAATATGAAAATGGCACAGCTAGCACACATAGCTGAGACCCAACAACTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGCGGAAGATTTTTGGACTACGTTCGCTAGCTTGCATTGCCAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGAGGCTTCACTAATTTAAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCTGCGGTTGTTGATATTGCCATCTCCAAATACTGCCCTCTTATATATGGCCCTTCTCAAATATCTTTCCTTCAACGTATGTGCTATGCATGGTTCCCAATTTCGCCTATTTGCCAGTTATTCTCACTCTGGTGCCTTGCAACTATACCTCAACTTTGCCTAGTCAACGGGATTTCCCTATACCCTGAGGTTTCAAATTCGTATTTTTGGATATTTTCTTTTGTACTCTTGTCATCCGTTTCGAGACATTTATACGAGGTCCTGACAACAGGAGCATCATTACAACATTGGGTCTACGAGCAAAGAATATGGATGATGAATGCAGTTACATCTCACTTATATGGTACTCTTGATGCTTTTATGAAGAAATTTGGCTGGAGGGAAGCAAGTTTCTCTATATCAAATAAAGTTGATGACATTGAGCAACTCAAGCGTTACCACGCGGGGGTATTTGATTTCCAAACCTCAGTACTTTTTCTTGTTCCATTGGCTTCACTGGTTATCTTGAACGTGGCCTCCCTTTGTGCCGGCATTGCCAGAATGATCTTTCTGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCGGTGGTCATCAATTACCCTATTATAGAAGGAATGCTAATAAGGAAAGATAGTGGTCGCATTCCACCATCAGTCACCCTATTGTCTGCTATAGCTTCAATCATTTTCTGCGTCTTGGGTTCAATTATTTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

739

Amino Acids

83.85

Weight (kDa)

6.56

Isoelectric Point (pI)

42.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 380	1.8e-77	Cellulose synthase
Cellulose_synt	PF03552	386 - 733	5e-55	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1463
Acc36I	ACCTGC	1 cut(s)	501
AccB1I	GGYRCC	2 cut(s)	1301, 1617
AccI	GTMKAC	1 cut(s)	1779
AccII	CGCG	3 cut(s)	780, 1337, 1928
AciI	CCGC	9 cut(s)	179, 312, 341, 472, 1092, 1346, 1490, 1928, 2084
AclWI	GGATC	4 cut(s)	12, 311, 899, 938
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	4 cut(s)	989, 1393, 1681, 1853
AcvI	CACGTG	1 cut(s)	400
AfaI	GTAC	6 cut(s)	574, 1096, 1288, 1710, 1831, 1956
AfiI	CCNNNNNNNGG	2 cut(s)	204, 1930
AflIII	ACRYGT	3 cut(s)	297, 399, 1335
AgsI	TTSAA	9 cut(s)	734, 811, 977, 1076, 1559, 1680, 1993, 2181, 2205
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	3 cut(s)	135, 216, 1383
AleI	CACNNNNGTG	1 cut(s)	1615
AloI	GAACNNNNNNTCC	2 cut(s)	1985, 2017
AluBI	AGCT	9 cut(s)	187, 394, 821, 917, 952, 1249, 1262, 1374, 2177
AluI	AGCT	9 cut(s)	187, 394, 821, 917, 952, 1249, 1262, 1374, 2177
Alw21I	GWGCWC	1 cut(s)	189
Alw26I	GTCTC	5 cut(s)	244, 519, 780, 1259, 1723
AlwI	GGATC	4 cut(s)	12, 311, 899, 938
Ama87I	CYCGRG	1 cut(s)	386
AoxI	GGCC	6 cut(s)	180, 233, 1079, 1418, 1534, 1998
ApeKI	GCWGC	1 cut(s)	536
ApoI	RAATTY	4 cut(s)	989, 1393, 1681, 1853
Asp700I	GAANNNNTTC	1 cut(s)	207
AspLEI	GCGC	1 cut(s)	425
AspS9I	GGNCC	7 cut(s)	234, 1079, 1156, 1184, 1465, 1535, 1744
AsuC2I	CCSGG	1 cut(s)	257
AsuHPI	GGTGA	7 cut(s)	355, 572, 668, 715, 948, 1325, 2149
AsuII	TTCGAA	1 cut(s)	201
AsuNHI	GCTAGC	2 cut(s)	1249, 1370
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	4 cut(s)	1156, 1184, 1465, 1744
AxyI	CCTNAGG	1 cut(s)	1671
BanI	GGYRCC	2 cut(s)	1301, 1617
BanII	GRGCYC	1 cut(s)	189
BbrPI	CACGTG	1 cut(s)	400
BbsI	GAAGAC	1 cut(s)	2059
Bbv12I	GWGCWC	1 cut(s)	189
BbvI	GCAGC	1 cut(s)	548
BcgI	CGANNNNNNTGC	2 cut(s)	736, 770
BciT130I	CCWGG	3 cut(s)	137, 218, 1385
BciVI	GTATCC	1 cut(s)	853
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	5 cut(s)	244, 519, 780, 1259, 1723
BfaI	CTAG	5 cut(s)	720, 1250, 1277, 1371, 1646
BfmI	CTRYAG	3 cut(s)	690, 1341, 2172
BfoI	RGCGCY	1 cut(s)	426
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	1 cut(s)	853
BisI	GCNGC	2 cut(s)	180, 537
BlsI	GCNGC	2 cut(s)	181, 538
BmcAI	AGTACT	1 cut(s)	1956
Bme1390I	CCNGG	4 cut(s)	137, 218, 257, 1385
Bme18I	GGWCC	4 cut(s)	1156, 1184, 1465, 1744
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	7 cut(s)	234, 1079, 1156, 1184, 1465, 1535, 1744
BmiI	GGNNCC	4 cut(s)	330, 1303, 1580, 1619
BmrFI	CCNGG	4 cut(s)	137, 218, 257, 1385
BmrI	ACTGGG	1 cut(s)	672
BmsI	GCATC	4 cut(s)	37, 406, 1769, 1828
BmtI	GCTAGC	2 cut(s)	1253, 1374
BmuI	ACTGGG	1 cut(s)	672
BpiI	GAAGAC	1 cut(s)	2059
BpmI	CTGGAG	3 cut(s)	347, 837, 1882
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	1 cut(s)	1898
BpuMI	CCSGG	1 cut(s)	257
Bsa29I	ATCGAT	1 cut(s)	1037
BsaAI	YACGTR	1 cut(s)	400
BsaBI	GATNNNNATC	1 cut(s)	321
BsaI	GGTCTC	2 cut(s)	519, 1259
BsaJI	CCNNGG	6 cut(s)	216, 336, 366, 1384, 1415, 1468
BsaWI	WCCGGW	1 cut(s)	845
BsaXI	ACNNNNNCTCC	4 cut(s)	1985, 2015, 2039, 2069
Bsc4I	CCNNNNNNNGG	2 cut(s)	204, 1930
Bse118I	RCCGGY	2 cut(s)	419, 2012
Bse1I	ACTGG	4 cut(s)	667, 1102, 1600, 1986
Bse21I	CCTNAGG	1 cut(s)	1671
Bse3DI	GCAATG	4 cut(s)	907, 933, 1378, 2016
Bse8I	GATNNNNATC	1 cut(s)	321
BseBI	CCWGG	3 cut(s)	137, 218, 1385
BseCI	ATCGAT	1 cut(s)	1037
BseDI	CCNNGG	6 cut(s)	216, 336, 366, 1384, 1415, 1468
BseGI	GGATG	5 cut(s)	550, 1072, 1205, 1718, 1803
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	2 cut(s)	204, 1930
BseMI	GCAATG	4 cut(s)	907, 933, 1378, 2016
BseMII	CTCAG	6 cut(s)	546, 998, 1254, 1436, 1662, 1965
BseNI	ACTGG	4 cut(s)	667, 1102, 1600, 1986
BseRI	GAGGAG	1 cut(s)	179
BseX3I	CGGCCG	1 cut(s)	180
BseXI	GCAGC	1 cut(s)	548
BsgI	GTGCAG	2 cut(s)	292, 529
Bsh1236I	CGCG	3 cut(s)	780, 1337, 1928
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	6 cut(s)	182, 235, 1081, 1420, 1536, 2000
BshNI	GGYRCC	2 cut(s)	1301, 1617
BshVI	ATCGAT	1 cut(s)	1037
BsiEI	CGRYCG	1 cut(s)	183
BsiHKAI	GWGCWC	1 cut(s)	189
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	5 cut(s)	257, 269, 420, 846, 2013
BslFI	GGGAC	1 cut(s)	1486
BslI	CCNNNNNNNGG	2 cut(s)	204, 1930
BsmAI	GTCTC	5 cut(s)	244, 519, 780, 1259, 1723
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	1 cut(s)	1486
BsmI	GAATGC	3 cut(s)	1810, 2121, 2142
BsnI	GGCC	6 cut(s)	182, 235, 1081, 1420, 1536, 2000
Bso31I	GGTCTC	2 cut(s)	519, 1259
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	1 cut(s)	189
Bsp19I	CCATGG	1 cut(s)	366
Bsp68I	TCGCGA	1 cut(s)	780
BspACI	CCGC	9 cut(s)	179, 312, 341, 472, 1092, 1346, 1490, 1928, 2084
BspANI	GGCC	6 cut(s)	182, 235, 1081, 1420, 1536, 2000
BspCNI	CTCAG	6 cut(s)	545, 997, 1255, 1435, 1663, 1964
BspDI	ATCGAT	1 cut(s)	1037
BspFNI	CGCG	3 cut(s)	780, 1337, 1928
BspLI	GGNNCC	4 cut(s)	330, 1303, 1580, 1619
BspMAI	CTGCAG	1 cut(s)	694
BspMI	ACCTGC	1 cut(s)	501
BspOI	GCTAGC	2 cut(s)	1253, 1374
BspPI	GGATC	4 cut(s)	12, 311, 899, 938
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	2 cut(s)	1301, 1617
BspTNI	GGTCTC	2 cut(s)	519, 1259
BsrDI	GCAATG	4 cut(s)	907, 933, 1378, 2016
BsrFI	RCCGGY	2 cut(s)	419, 2012
BsrI	ACTGG	4 cut(s)	667, 1102, 1600, 1986
BssAI	RCCGGY	2 cut(s)	419, 2012
BssECI	CCNNGG	6 cut(s)	216, 336, 366, 1384, 1415, 1468
BssT1I	CCWWGG	3 cut(s)	366, 1415, 1468
Bst2UI	CCWGG	3 cut(s)	137, 218, 1385
Bst4CI	ACNGT	4 cut(s)	337, 355, 887, 1025
Bst6I	CTCTTC	2 cut(s)	625, 1311
BstBAI	YACGTR	1 cut(s)	400
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	7 cut(s)	421, 924, 1083, 1251, 1372, 1376, 2014
BstDEI	CTNAG	7 cut(s)	532, 984, 1169, 1263, 1422, 1671, 1951
BstDSI	CCRYGG	2 cut(s)	336, 366
BstF5I	GGATG	5 cut(s)	550, 1072, 1205, 1718, 1803
BstFNI	CGCG	3 cut(s)	780, 1337, 1928
BstH2I	RGCGCY	1 cut(s)	426
BstHHI	GCGC	1 cut(s)	425
BstMAI	GTCTC	5 cut(s)	244, 519, 780, 1259, 1723
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	8 cut(s)	923, 1098, 1250, 1259, 1343, 1380, 1915, 2018
BstNI	CCWGG	3 cut(s)	137, 218, 1385
BstNSI	RCATGY	1 cut(s)	757
BstSCI	CCNGG	4 cut(s)	135, 216, 255, 1383
BstSFI	CTRYAG	3 cut(s)	690, 1341, 2172
BstUI	CGCG	3 cut(s)	780, 1337, 1928
BstV1I	GCAGC	1 cut(s)	548
BstV2I	GAAGAC	1 cut(s)	2059
BstZI	CGGCCG	1 cut(s)	180
Bsu15I	ATCGAT	1 cut(s)	1037
Bsu36I	CCTNAGG	1 cut(s)	1671
BsuI	GTATCC	1 cut(s)	853
BsuRI	GGCC	6 cut(s)	182, 235, 1081, 1420, 1536, 2000
BsuTUI	ATCGAT	1 cut(s)	1037
BtgI	CCRYGG	2 cut(s)	336, 366
BtgZI	GCGATG	1 cut(s)	76
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	5 cut(s)	550, 1072, 1205, 1718, 1803
BtsIMutI	CAGTG	4 cut(s)	351, 660, 1404, 1979
BtuMI	TCGCGA	1 cut(s)	780
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	7 cut(s)	421, 924, 1083, 1251, 1372, 1376, 2014
CfoI	GCGC	1 cut(s)	425
Cfr10I	RCCGGY	2 cut(s)	419, 2012
Cfr13I	GGNCC	7 cut(s)	234, 1079, 1156, 1184, 1465, 1535, 1744
ClaI	ATCGAT	1 cut(s)	1037
CseI	GACGC	2 cut(s)	1326, 2182
Csp6I	GTAC	6 cut(s)	573, 1095, 1287, 1709, 1830, 1955
CviAII	CATG	7 cut(s)	38, 367, 653, 754, 1087, 1575, 2215
CviQI	GTAC	6 cut(s)	573, 1095, 1287, 1709, 1830, 1955
DdeI	CTNAG	7 cut(s)	532, 984, 1169, 1263, 1422, 1671, 1951
DraI	TTTAAA	1 cut(s)	1452
DrdI	GACNNNNNNGTC	1 cut(s)	1463
DseDI	GACNNNNNNGTC	1 cut(s)	1463
EaeI	YGGCCR	1 cut(s)	180
EagI	CGGCCG	1 cut(s)	180
Eam1104I	CTCTTC	2 cut(s)	625, 1311
EarI	CTCTTC	2 cut(s)	625, 1311
Ecl136II	GAGCTC	1 cut(s)	187
EclXI	CGGCCG	1 cut(s)	180
Eco130I	CCWWGG	3 cut(s)	366, 1415, 1468
Eco147I	AGGCCT	1 cut(s)	1420
Eco24I	GRGCYC	1 cut(s)	189
Eco31I	GGTCTC	2 cut(s)	519, 1259
Eco47I	GGWCC	4 cut(s)	1156, 1184, 1465, 1744
Eco52I	CGGCCG	1 cut(s)	180
Eco53kI	GAGCTC	1 cut(s)	187
Eco72I	CACGTG	1 cut(s)	400
Eco81I	CCTNAGG	1 cut(s)	1671
Eco88I	CYCGRG	1 cut(s)	386
EcoICRI	GAGCTC	1 cut(s)	187
EcoO109I	RGGNCCY	2 cut(s)	1156, 1744
EcoRI	GAATTC	1 cut(s)	1393
EcoRII	CCWGG	3 cut(s)	135, 216, 1383
EcoT14I	CCWWGG	3 cut(s)	366, 1415, 1468
EcoT22I	ATGCAT	1 cut(s)	1576
EcoT38I	GRGCYC	1 cut(s)	189
ErhI	CCWWGG	3 cut(s)	366, 1415, 1468
Esp3I	CGTCTC	1 cut(s)	244
FaeI	CATG	7 cut(s)	41, 370, 656, 757, 1090, 1578, 2218
FaqI	GGGAC	1 cut(s)	1486
FatI	CATG	7 cut(s)	37, 366, 652, 753, 1086, 1574, 2214
FauI	CCCGC	1 cut(s)	1921
FblI	GTMKAC	1 cut(s)	1779
Fnu4HI	GCNGC	2 cut(s)	180, 537
FokI	GGATG	5 cut(s)	557, 1079, 1192, 1705, 1810
FriOI	GRGCYC	1 cut(s)	189
Fsp4HI	GCNGC	2 cut(s)	180, 537
FspBI	CTAG	5 cut(s)	720, 1250, 1277, 1371, 1646
GlaI	GCGC	1 cut(s)	424
GluI	GCNGC	2 cut(s)	180, 537
GsuI	CTGGAG	3 cut(s)	347, 837, 1882
HaeII	RGCGCY	1 cut(s)	426
HaeIII	GGCC	6 cut(s)	182, 235, 1081, 1420, 1536, 2000
HapII	CCGG	5 cut(s)	257, 269, 420, 846, 2013
HgaI	GACGC	2 cut(s)	1326, 2182
HhaI	GCGC	1 cut(s)	425
Hin1II	CATG	7 cut(s)	41, 370, 656, 757, 1090, 1578, 2218
Hin6I	GCGC	1 cut(s)	423
HinP1I	GCGC	1 cut(s)	423
HincII	GTYRAC	2 cut(s)	43, 1651
HindII	GTYRAC	2 cut(s)	43, 1651
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	2 cut(s)	433, 478
HpaII	CCGG	5 cut(s)	257, 269, 420, 846, 2013
HphI	GGTGA	7 cut(s)	355, 572, 668, 715, 948, 1325, 2149
Hpy166II	GTNNAC	3 cut(s)	43, 1651, 1780
Hpy188I	TCNGA	4 cut(s)	9, 412, 438, 987
Hpy8I	GTNNAC	3 cut(s)	43, 1651, 1780
Hpy99I	CGWCG	1 cut(s)	299
HpyAV	CCTTC	7 cut(s)	208, 801, 877, 969, 1548, 1565, 2105
HpyCH4III	ACNGT	4 cut(s)	337, 355, 887, 1025
HpyCH4IV	ACGT	8 cut(s)	71, 251, 297, 399, 461, 1364, 1561, 1995
HpyF10VI	GCNNNNNNNGC	8 cut(s)	923, 1098, 1250, 1259, 1343, 1380, 1915, 2018
HpyF3I	CTNAG	7 cut(s)	532, 984, 1169, 1263, 1422, 1671, 1951
HpySE526I	ACGT	8 cut(s)	71, 251, 297, 399, 461, 1364, 1561, 1995
Hsp92II	CATG	7 cut(s)	41, 370, 656, 757, 1090, 1578, 2218
HspAI	GCGC	1 cut(s)	423
KroI	GCCGGC	2 cut(s)	419, 2012
KroNI	GCCGGC	2 cut(s)	421, 2014
LmnI	GCTCC	5 cut(s)	192, 328, 666, 818, 1757
Lsp1109I	GCAGC	1 cut(s)	548
LweI	GCATC	4 cut(s)	37, 406, 1769, 1828
MaeI	CTAG	5 cut(s)	720, 1250, 1277, 1371, 1646
MaeII	ACGT	8 cut(s)	71, 251, 297, 399, 461, 1364, 1561, 1995
MaeIII	GTNAC	6 cut(s)	430, 656, 887, 1810, 1919, 2155
MhlI	GDGCHC	1 cut(s)	189
MluI	ACGCGT	1 cut(s)	1335
MlyI	GAGTC	1 cut(s)	427
MmeI	TCCRAC	2 cut(s)	1370, 2025
Mph1103I	ATGCAT	1 cut(s)	1576
MroNI	GCCGGC	2 cut(s)	419, 2012
MroXI	GAANNNNTTC	1 cut(s)	207
MseI	TTAA	3 cut(s)	624, 1044, 1451
MslI	CAYNNNNRTG	3 cut(s)	226, 1615, 1824
MspA1I	CMGCKG	1 cut(s)	314
MspI	CCGG	5 cut(s)	257, 269, 420, 846, 2013
MspR9I	CCNGG	4 cut(s)	137, 218, 257, 1385
Mva1269I	GAATGC	3 cut(s)	1810, 2121, 2142
MvaI	CCWGG	3 cut(s)	137, 218, 1385
MvnI	CGCG	3 cut(s)	780, 1337, 1928
MwoI	GCNNNNNNNGC	8 cut(s)	923, 1098, 1250, 1259, 1343, 1380, 1915, 2018
NaeI	GCCGGC	2 cut(s)	421, 2014
NciI	CCSGG	1 cut(s)	257
NcoI	CCATGG	1 cut(s)	366
NgoMIV	GCCGGC	2 cut(s)	419, 2012
NheI	GCTAGC	2 cut(s)	1249, 1370
NlaIII	CATG	7 cut(s)	41, 370, 656, 757, 1090, 1578, 2218
NlaIV	GGNNCC	4 cut(s)	330, 1303, 1580, 1619
NmeAIII	GCCGAG	2 cut(s)	208, 898
NmuCI	GTSAC	4 cut(s)	430, 656, 887, 2155
NruI	TCGCGA	1 cut(s)	780
NsiI	ATGCAT	1 cut(s)	1576
NspI	RCATGY	1 cut(s)	757
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	1 cut(s)	1615
PceI	AGGCCT	1 cut(s)	1420
PctI	GAATGC	3 cut(s)	1810, 2121, 2142
PdiI	GCCGGC	2 cut(s)	421, 2014
PdmI	GAANNNNTTC	1 cut(s)	207
PfeI	GAWTC	1 cut(s)	478
PfoI	TCCNGGA	2 cut(s)	135, 255
PkrI	GCNGC	2 cut(s)	181, 538
PleI	GAGTC	1 cut(s)	427
PmaCI	CACGTG	1 cut(s)	400
PmlI	CACGTG	1 cut(s)	400
PpsI	GAGTC	1 cut(s)	427
Ppu21I	YACGTR	1 cut(s)	400
PpuMI	RGGWCCY	2 cut(s)	1156, 1744
Psp124BI	GAGCTC	1 cut(s)	189
Psp5II	RGGWCCY	2 cut(s)	1156, 1744
Psp6I	CCWGG	3 cut(s)	135, 216, 1383
PspCI	CACGTG	1 cut(s)	400
PspGI	CCWGG	3 cut(s)	135, 216, 1383
PspN4I	GGNNCC	4 cut(s)	330, 1303, 1580, 1619
PspPI	GGNCC	7 cut(s)	234, 1079, 1156, 1184, 1465, 1535, 1744
PspPPI	RGGWCCY	2 cut(s)	1156, 1744
PstI	CTGCAG	1 cut(s)	694
RruI	TCGCGA	1 cut(s)	780
RsaI	GTAC	6 cut(s)	574, 1096, 1288, 1710, 1831, 1956
RsaNI	GTAC	6 cut(s)	573, 1095, 1287, 1709, 1830, 1955
RseI	CAYNNNNRTG	3 cut(s)	226, 1615, 1824
SacI	GAGCTC	1 cut(s)	189
SaqAI	TTAA	3 cut(s)	624, 1044, 1451
SatI	GCNGC	2 cut(s)	180, 537
Sau96I	GGNCC	7 cut(s)	234, 1079, 1156, 1184, 1465, 1535, 1744
ScaI	AGTACT	1 cut(s)	1956
SchI	GAGTC	1 cut(s)	427
ScrFI	CCNGG	4 cut(s)	137, 218, 257, 1385
SduI	GDGCHC	1 cut(s)	189
SfaNI	GCATC	4 cut(s)	37, 406, 1769, 1828
SfcI	CTRYAG	3 cut(s)	690, 1341, 2172
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	4 cut(s)	1156, 1184, 1465, 1744
SmiI	ATTTAAAT	1 cut(s)	1452
SmiMI	CAYNNNNRTG	3 cut(s)	226, 1615, 1824
SmlI	CTYRAG	1 cut(s)	1913
SmoI	CTYRAG	1 cut(s)	1913
SseBI	AGGCCT	1 cut(s)	1420
SsiI	CCGC	9 cut(s)	179, 312, 341, 472, 1092, 1346, 1490, 1928, 2084
SspMI	CTAG	5 cut(s)	720, 1250, 1277, 1371, 1646
SstI	GAGCTC	1 cut(s)	189
StuI	AGGCCT	1 cut(s)	1420
StyD4I	CCNGG	4 cut(s)	135, 216, 255, 1383
StyI	CCWWGG	3 cut(s)	366, 1415, 1468
SwaI	ATTTAAAT	1 cut(s)	1452
TaaI	ACNGT	4 cut(s)	337, 355, 887, 1025
TaiI	ACGT	8 cut(s)	74, 254, 300, 402, 464, 1367, 1564, 1998
TaqI	TCGA	8 cut(s)	67, 118, 201, 244, 294, 375, 1037, 1727
TatI	WGTACW	2 cut(s)	1708, 1954
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	3 cut(s)	624, 1044, 1451
Tru9I	TTAA	3 cut(s)	624, 1044, 1451
TscAI	CASTG	4 cut(s)	358, 667, 1404, 1986
TseFI	GTSAC	4 cut(s)	430, 656, 887, 2155
TseI	GCWGC	1 cut(s)	536
Tsp45I	GTSAC	4 cut(s)	430, 656, 887, 2155
TspGWI	ACGGA	2 cut(s)	1176, 1711
TspRI	CASTG	4 cut(s)	358, 667, 1404, 1986
VpaK11BI	GGWCC	4 cut(s)	1156, 1184, 1465, 1744
XapI	RAATTY	4 cut(s)	989, 1393, 1681, 1853
XceI	RCATGY	1 cut(s)	757
XmiI	GTMKAC	1 cut(s)	1779
XmnI	GAANNNNTTC	1 cut(s)	207
XspI	CTAG	5 cut(s)	720, 1250, 1277, 1371, 1646
ZrmI	AGTACT	1 cut(s)	1956
Zsp2I	ATGCAT	1 cut(s)	1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.