Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

7580348 .. 7583780

Gene Structure 3433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG035200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGATCAGAGTTCTAATGCCGCTATGCATCTCTGCCATGTTAACAAGCTCACTATCTTCATTAATCGAACGTATACAGTCATACACTCCGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTTTCTTCTTTCGTGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTCTCTTCCTTCGAATGGCTTCTAAGCCAGGCATATCGGTGGAGGCCCGTCTCTCGAACTGTGTTTCCGGAGAGATTGCCGGAAGATGACGAACTTCCTGCAGTCGACGTGTTCATTTGCACCTCTGATCCGGATAAGGAGCCACCCGTGGAGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCGAGAAGCTTCATGTGTATTTGTCAGATGATGCCGGTGCTGATGTGACTCTGAATGTTATGAGAGAGGCTTGGACGTTTGCAAAGTGGTGGATTCCATTTTGTAAGAGGTATGAGATCAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGTAGCTGAGGATGAGAATGAAGATGATGATTTGGGGGGTGCTGATTTCATAAAAGAGAGACAAATTGTTCAGGAAAAATATGAGGTGTTTACGGAAAGAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAACGGTAAGCATGGAGATCATTCTGCAGTCATTGAGGTGATACAAGAAAGTTCCAGTGATCATGCATTTGAAGAAAACGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTTCTTCGGGTATCCGGTGTGATCAGTAACTCTCCCTTCATATTAGGGCTTGATTGTGATATGTATTGCAATGATCCAAGTTCAGCTCGACAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACTCTAGCACTTGTGCAATTCCCTCAGAAATTCCACAACATCAGTAAGAAGGACATCTACGACAGTCAGTTGAGAGAGTTGTTTTCGGTGCTATGGCAAGGTTTAGATGGACTTCAAGGGCCATGCTTATCCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATTCCTAAAGGAGGATCATGAGGATCTTATGGAACTTAGACAATATGTTGGTCCATCCAGTGAGTTCATAAAATCCCTGCTTGGAAACCACAATCCTAATATGAAAATGCCACAGCTAGCTGAGACCCAACAACTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGACTGGTTTCTTATACGCGTCTGTAGTGGAAGATTATTTCACAGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGTGGCACTACTAATTTGAATGACGCTTTGGTCCAAAGGACAAGATGGAGTTCTGGATTGGTTGATGTTGCCATCTCCAGATACTGCCCTCTTATATATGGTCTTTCTAAAATGTCTTTCCTTGAAAGTATGTGCTATGCATGGCTAGCAATTTACCCAATTTGCCGGTTCTTCTCACTCTGGTGCTTTGCAACTATACCTCAGCTTTGCCTAGTCAAGGGCATTTCCCTGTACCCTGAGGTCTCAAGTTCGTATTTTTGGATATTTTCTCTTGTATTCCTCTTATCTGTTTTGAGACATTTACATGAGGTCCTCACAACAGAAGCGTCATTACAACATTGGATATACGAGCAAAGAATATGGATGATGAAAGCAGTTACATCTCACTTATATGGTAGTCTTGATGCTTTTATGAAGAAATTTGGTTTGAGGGAAGCAAGTTTCTTCCCAACAAATAAAGTTGATGACGTTGAGCAACGCCAGCGTCACATCGCGGGGGTATTTGATTTCCGAACCTCAGCACTTTTTCTTGTTCCATTGGCTTCACTGGTTATCTTGAACATGGCCTCTCTTTGTGTGGGCATTAGCAGAGTGATCTTTCAGGGGGAGTTGGAGAAGTTGTTTATACAACTCTTCATACCATTTTATGCGGTGGTGGTCAATTACCCTATTATAGAAGGAATGTTAATAAGGAAAGACAGTGGTCGCATCCCACCATCAGTCACCTTATTGTCTGCTACTGCTTCAATCATTTTCTGCGTTTTGGGTTCAATTATTTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

737

Amino Acids

83.99

Weight (kDa)

5.92

Isoelectric Point (pI)

44.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 378	1.8e-79	Cellulose synthase
Cellulose_synt	PF03552	388 - 731	3.5e-58	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1457
Acc36I	ACCTGC	1 cut(s)	501
AccB1I	GGYRCC	1 cut(s)	1295
AccI	GTMKAC	2 cut(s)	74, 294
AccII	CGCG	3 cut(s)	783, 1331, 1922
AccIII	TCCGGA	2 cut(s)	256, 319
AciI	CCGC	4 cut(s)	21, 179, 1922, 2078
AclWI	GGATC	6 cut(s)	12, 311, 902, 941, 1158, 1167
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	4 cut(s)	992, 1136, 1387, 1847
AfaI	GTAC	3 cut(s)	1099, 1282, 1661
AfiI	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
AflIII	ACRYGT	2 cut(s)	297, 1329
AgsI	TTSAA	8 cut(s)	737, 814, 1079, 1447, 1553, 1987, 2175, 2199
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	1 cut(s)	216
AjuI	GAANNNNNNNTTGG	2 cut(s)	1439, 1471
AleI	CACNNNNGTG	1 cut(s)	1609
AloI	GAACNNNNNNTCC	2 cut(s)	238, 270
Alw21I	GWGCWC	2 cut(s)	189, 826
Alw26I	GTCTC	9 cut(s)	196, 244, 519, 586, 781, 1253, 1307, 1675, 1717
AlwI	GGATC	6 cut(s)	12, 311, 902, 941, 1158, 1167
AlwNI	CAGNNNCTG	2 cut(s)	539, 1512
Ama87I	CYCGRG	1 cut(s)	386
Aor13HI	TCCGGA	2 cut(s)	256, 319
AoxI	GGCC	5 cut(s)	180, 233, 1082, 1412, 1992
ApoI	RAATTY	4 cut(s)	992, 1136, 1387, 1847
AseI	ATTAAT	1 cut(s)	63
Asp700I	GAANNNNTTC	1 cut(s)	207
AspS9I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
AsuHPI	GGTGA	6 cut(s)	355, 668, 715, 951, 1319, 2143
AsuII	TTCGAA	1 cut(s)	201
AsuNHI	GCTAGC	3 cut(s)	1252, 1364, 1573
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	3 cut(s)	1187, 1459, 1738
AxyI	CCTNAGG	1 cut(s)	1665
BanI	GGYRCC	1 cut(s)	1295
BanII	GRGCYC	2 cut(s)	189, 826
BarI	GAAGNNNNNNTAC	4 cut(s)	1004, 1036, 1743, 1775
Bbv12I	GWGCWC	2 cut(s)	189, 826
BbvCI	CCTCAGC	3 cut(s)	540, 1629, 1945
BccI	CCATC	9 cut(s)	161, 169, 813, 1064, 1198, 1286, 1467, 1508, 2152
BcgI	CGANNNNNNTGC	2 cut(s)	269, 303
BciT130I	CCWGG	1 cut(s)	218
BciVI	GTATCC	1 cut(s)	856
BclI	TGATCA	2 cut(s)	724, 855
BcoDI	GTCTC	9 cut(s)	196, 244, 519, 586, 781, 1253, 1307, 1675, 1717
BfaI	CTAG	6 cut(s)	968, 1253, 1271, 1365, 1574, 1640
BfmI	CTRYAG	4 cut(s)	115, 288, 690, 1335
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	1 cut(s)	856
BisI	GCNGC	2 cut(s)	21, 180
BlsI	GCNGC	2 cut(s)	22, 181
Bme1390I	CCNGG	1 cut(s)	218
Bme18I	GGWCC	3 cut(s)	1187, 1459, 1738
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
BmiI	GGNNCC	2 cut(s)	330, 1297
BmrFI	CCNGG	1 cut(s)	218
BmrI	ACTGGG	1 cut(s)	672
BmsI	GCATC	4 cut(s)	37, 406, 1822, 2145
BmtI	GCTAGC	3 cut(s)	1256, 1368, 1577
BmuI	ACTGGG	1 cut(s)	672
BoxI	GACNNNNGTC	1 cut(s)	2130
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpmI	CTGGAG	2 cut(s)	840, 1489
Bpu10I	CCTNAGC	3 cut(s)	540, 1629, 1945
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	1 cut(s)	1657
BsaI	GGTCTC	3 cut(s)	519, 1253, 1675
BsaJI	CCNNGG	3 cut(s)	336, 366, 1409
BsaWI	WCCGGW	4 cut(s)	256, 319, 848, 1094
BsaXI	ACNNNNNCTCC	2 cut(s)	2033, 2063
Bsc4I	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
Bse118I	RCCGGY	2 cut(s)	419, 1593
Bse1I	ACTGG	6 cut(s)	667, 720, 1105, 1194, 1321, 1980
Bse21I	CCTNAGG	1 cut(s)	1665
Bse3DI	GCAATG	3 cut(s)	910, 936, 1372
BseAI	TCCGGA	2 cut(s)	256, 319
BseBI	CCWGG	1 cut(s)	218
BseDI	CCNNGG	3 cut(s)	336, 366, 1409
BseGI	GGATG	4 cut(s)	550, 1190, 1797, 2136
BseLI	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
BseMI	GCAATG	3 cut(s)	910, 936, 1372
BseMII	CTCAG	8 cut(s)	531, 546, 1001, 1248, 1430, 1643, 1656, 1959
BseNI	ACTGG	6 cut(s)	667, 720, 1105, 1194, 1321, 1980
BseX3I	CGGCCG	1 cut(s)	180
BsgI	GTGCAG	1 cut(s)	529
Bsh1236I	CGCG	3 cut(s)	783, 1331, 1922
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
BshNI	GGYRCC	1 cut(s)	1295
BsiEI	CGRYCG	1 cut(s)	183
BsiHKAI	GWGCWC	2 cut(s)	189, 826
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	7 cut(s)	257, 269, 320, 420, 849, 1095, 1594
BslI	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
BsmAI	GTCTC	9 cut(s)	196, 244, 519, 586, 781, 1253, 1307, 1675, 1717
BsmBI	CGTCTC	2 cut(s)	196, 244
BsnI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
Bso31I	GGTCTC	3 cut(s)	519, 1253, 1675
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	2 cut(s)	189, 826
Bsp13I	TCCGGA	2 cut(s)	256, 319
Bsp19I	CCATGG	1 cut(s)	366
Bsp68I	TCGCGA	1 cut(s)	783
BspACI	CCGC	4 cut(s)	21, 179, 1922, 2078
BspANI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
BspCNI	CTCAG	8 cut(s)	532, 545, 1000, 1249, 1429, 1642, 1657, 1958
BspEI	TCCGGA	2 cut(s)	256, 319
BspFNI	CGCG	3 cut(s)	783, 1331, 1922
BspHI	TCATGA	1 cut(s)	1153
BspLI	GGNNCC	2 cut(s)	330, 1297
BspMAI	CTGCAG	2 cut(s)	292, 694
BspMI	ACCTGC	1 cut(s)	501
BspOI	GCTAGC	3 cut(s)	1256, 1368, 1577
BspPI	GGATC	6 cut(s)	12, 311, 902, 941, 1158, 1167
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	1 cut(s)	1295
BspTNI	GGTCTC	3 cut(s)	519, 1253, 1675
BsrDI	GCAATG	3 cut(s)	910, 936, 1372
BsrFI	RCCGGY	2 cut(s)	419, 1593
BsrI	ACTGG	6 cut(s)	667, 720, 1105, 1194, 1321, 1980
BssAI	RCCGGY	2 cut(s)	419, 1593
BssECI	CCNNGG	3 cut(s)	336, 366, 1409
BssNAI	GTATAC	1 cut(s)	75
BssT1I	CCWWGG	2 cut(s)	366, 1409
Bst1107I	GTATAC	1 cut(s)	75
Bst2UI	CCWGG	1 cut(s)	218
Bst4CI	ACNGT	6 cut(s)	79, 250, 355, 671, 1028, 2129
Bst6I	CTCTTC	3 cut(s)	199, 1305, 2066
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	5 cut(s)	1254, 1366, 1370, 1575, 1910
BstDSI	CCRYGG	2 cut(s)	336, 366
BstENI	CCTNNNNNAGG	2 cut(s)	1145, 1643
BstF5I	GGATG	4 cut(s)	550, 1190, 1797, 2136
BstFNI	CGCG	3 cut(s)	783, 1331, 1922
BstMAI	GTCTC	9 cut(s)	196, 244, 519, 586, 781, 1253, 1307, 1675, 1717
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	4 cut(s)	926, 1374, 1574, 1909
BstNI	CCWGG	1 cut(s)	218
BstNSI	RCATGY	1 cut(s)	760
BstPAI	GACNNNNGTC	1 cut(s)	2130
BstSCI	CCNGG	1 cut(s)	216
BstSFI	CTRYAG	4 cut(s)	115, 288, 690, 1335
BstUI	CGCG	3 cut(s)	783, 1331, 1922
BstX2I	RGATCY	1 cut(s)	1159
BstYI	RGATCY	1 cut(s)	1159
BstZ17I	GTATAC	1 cut(s)	75
BstZI	CGGCCG	1 cut(s)	180
Bsu36I	CCTNAGG	1 cut(s)	1665
BsuI	GTATCC	1 cut(s)	856
BsuRI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
BtgI	CCRYGG	2 cut(s)	336, 366
BtgZI	GCGATG	1 cut(s)	1903
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	4 cut(s)	550, 1190, 1797, 2136
BtsI	GCAGTG	1 cut(s)	1435
BtsIMutI	CAGTG	8 cut(s)	351, 660, 727, 1201, 1398, 1435, 1973, 2134
BtuMI	TCGCGA	1 cut(s)	783
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	5 cut(s)	1254, 1366, 1370, 1575, 1910
CaiI	CAGNNNCTG	2 cut(s)	539, 1512
CciI	TCATGA	1 cut(s)	1153
Cfr10I	RCCGGY	2 cut(s)	419, 1593
Cfr13I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
CseI	GACGC	4 cut(s)	1320, 1460, 1743, 1901
Csp6I	GTAC	3 cut(s)	1098, 1281, 1660
CviQI	GTAC	3 cut(s)	1098, 1281, 1660
DrdI	GACNNNNNNGTC	1 cut(s)	1457
DseDI	GACNNNNNNGTC	1 cut(s)	1457
EaeI	YGGCCR	1 cut(s)	180
EagI	CGGCCG	1 cut(s)	180
Eam1104I	CTCTTC	3 cut(s)	199, 1305, 2066
EarI	CTCTTC	3 cut(s)	199, 1305, 2066
Ecl136II	GAGCTC	2 cut(s)	187, 824
EclXI	CGGCCG	1 cut(s)	180
Eco130I	CCWWGG	2 cut(s)	366, 1409
Eco147I	AGGCCT	1 cut(s)	1414
Eco24I	GRGCYC	2 cut(s)	189, 826
Eco31I	GGTCTC	3 cut(s)	519, 1253, 1675
Eco47I	GGWCC	3 cut(s)	1187, 1459, 1738
Eco52I	CGGCCG	1 cut(s)	180
Eco53kI	GAGCTC	2 cut(s)	187, 824
Eco81I	CCTNAGG	1 cut(s)	1665
Eco88I	CYCGRG	1 cut(s)	386
EcoICRI	GAGCTC	2 cut(s)	187, 824
EcoNI	CCTNNNNNAGG	2 cut(s)	1145, 1643
EcoO109I	RGGNCCY	1 cut(s)	1738
EcoRI	GAATTC	1 cut(s)	1387
EcoRII	CCWGG	1 cut(s)	216
EcoT14I	CCWWGG	2 cut(s)	366, 1409
EcoT22I	ATGCAT	3 cut(s)	30, 733, 1570
EcoT38I	GRGCYC	2 cut(s)	189, 826
ErhI	CCWWGG	2 cut(s)	366, 1409
Esp3I	CGTCTC	2 cut(s)	196, 244
FauI	CCCGC	1 cut(s)	1915
FbaI	TGATCA	2 cut(s)	724, 855
FblI	GTMKAC	2 cut(s)	74, 294
Fnu4HI	GCNGC	2 cut(s)	21, 180
FokI	GGATG	4 cut(s)	557, 1177, 1804, 2123
FriOI	GRGCYC	2 cut(s)	189, 826
Fsp4HI	GCNGC	2 cut(s)	21, 180
FspBI	CTAG	6 cut(s)	968, 1253, 1271, 1365, 1574, 1640
GluI	GCNGC	2 cut(s)	21, 180
GsuI	CTGGAG	2 cut(s)	840, 1489
HaeIII	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
HapII	CCGG	7 cut(s)	257, 269, 320, 420, 849, 1095, 1594
HgaI	GACGC	4 cut(s)	1320, 1460, 1743, 1901
HincII	GTYRAC	2 cut(s)	43, 295
HindII	GTYRAC	2 cut(s)	43, 295
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	2 cut(s)	433, 478
HpaI	GTTAAC	1 cut(s)	43
HpaII	CCGG	7 cut(s)	257, 269, 320, 420, 849, 1095, 1594
HphI	GGTGA	6 cut(s)	355, 668, 715, 951, 1319, 2143
Hpy166II	GTNNAC	4 cut(s)	43, 75, 295, 624
Hpy188I	TCNGA	6 cut(s)	9, 316, 412, 438, 990, 1940
Hpy8I	GTNNAC	4 cut(s)	43, 75, 295, 624
Hpy99I	CGWCG	2 cut(s)	95, 299
HpyAV	CCTTC	5 cut(s)	208, 804, 880, 1006, 2099
HpyCH4III	ACNGT	6 cut(s)	79, 250, 355, 671, 1028, 2129
HpyCH4IV	ACGT	4 cut(s)	71, 297, 461, 1896
HpyF10VI	GCNNNNNNNGC	4 cut(s)	926, 1374, 1574, 1909
HpySE526I	ACGT	4 cut(s)	71, 297, 461, 1896
Kpn2I	TCCGGA	2 cut(s)	256, 319
Ksp22I	TGATCA	2 cut(s)	724, 855
KspAI	GTTAAC	1 cut(s)	43
LmnI	GCTCC	2 cut(s)	328, 821
LweI	GCATC	4 cut(s)	37, 406, 1822, 2145
MaeI	CTAG	6 cut(s)	968, 1253, 1271, 1365, 1574, 1640
MaeII	ACGT	4 cut(s)	71, 297, 461, 1896
MaeIII	GTNAC	7 cut(s)	137, 430, 656, 860, 1804, 1913, 2149
MflI	RGATCY	1 cut(s)	1159
MhlI	GDGCHC	2 cut(s)	189, 826
MluI	ACGCGT	1 cut(s)	1329
MlyI	GAGTC	1 cut(s)	427
MmeI	TCCRAC	2 cut(s)	1364, 2019
Mph1103I	ATGCAT	3 cut(s)	30, 733, 1570
MroI	TCCGGA	2 cut(s)	256, 319
MroXI	GAANNNNTTC	1 cut(s)	207
MseI	TTAA	3 cut(s)	42, 63, 2114
MslI	CAYNNNNRTG	5 cut(s)	226, 701, 1609, 1731, 1818
MspI	CCGG	7 cut(s)	257, 269, 320, 420, 849, 1095, 1594
MspR9I	CCNGG	1 cut(s)	218
MvaI	CCWGG	1 cut(s)	218
MvnI	CGCG	3 cut(s)	783, 1331, 1922
MwoI	GCNNNNNNNGC	4 cut(s)	926, 1374, 1574, 1909
NcoI	CCATGG	1 cut(s)	366
NheI	GCTAGC	3 cut(s)	1252, 1364, 1573
NlaIV	GGNNCC	2 cut(s)	330, 1297
NmeAIII	GCCGAG	1 cut(s)	208
NmuCI	GTSAC	5 cut(s)	137, 430, 656, 1913, 2149
NruI	TCGCGA	1 cut(s)	783
NsiI	ATGCAT	3 cut(s)	30, 733, 1570
NspI	RCATGY	1 cut(s)	760
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	1 cut(s)	1609
PagI	TCATGA	1 cut(s)	1153
PceI	AGGCCT	1 cut(s)	1414
PdmI	GAANNNNTTC	1 cut(s)	207
PfeI	GAWTC	1 cut(s)	478
PkrI	GCNGC	2 cut(s)	22, 181
PleI	GAGTC	1 cut(s)	427
PpsI	GAGTC	1 cut(s)	427
PpuMI	RGGWCCY	1 cut(s)	1738
PshAI	GACNNNNGTC	1 cut(s)	2130
PshBI	ATTAAT	1 cut(s)	63
Psp124BI	GAGCTC	2 cut(s)	189, 826
Psp5II	RGGWCCY	1 cut(s)	1738
Psp6I	CCWGG	1 cut(s)	216
PspGI	CCWGG	1 cut(s)	216
PspN4I	GGNNCC	2 cut(s)	330, 1297
PspPI	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
PspPPI	RGGWCCY	1 cut(s)	1738
PstI	CTGCAG	2 cut(s)	292, 694
PstNI	CAGNNNCTG	2 cut(s)	539, 1512
PsuI	RGATCY	1 cut(s)	1159
RruI	TCGCGA	1 cut(s)	783
RsaI	GTAC	3 cut(s)	1099, 1282, 1661
RsaNI	GTAC	3 cut(s)	1098, 1281, 1660
RseI	CAYNNNNRTG	5 cut(s)	226, 701, 1609, 1731, 1818
SacI	GAGCTC	2 cut(s)	189, 826
SalI	GTCGAC	1 cut(s)	293
SaqAI	TTAA	3 cut(s)	42, 63, 2114
SatI	GCNGC	2 cut(s)	21, 180
Sau96I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
SchI	GAGTC	1 cut(s)	427
ScrFI	CCNGG	1 cut(s)	218
SduI	GDGCHC	2 cut(s)	189, 826
SfaNI	GCATC	4 cut(s)	37, 406, 1822, 2145
SfcI	CTRYAG	4 cut(s)	115, 288, 690, 1335
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	3 cut(s)	1187, 1459, 1738
SmiMI	CAYNNNNRTG	5 cut(s)	226, 701, 1609, 1731, 1818
SmlI	CTYRAG	1 cut(s)	1672
SmoI	CTYRAG	1 cut(s)	1672
SseBI	AGGCCT	1 cut(s)	1414
SsiI	CCGC	4 cut(s)	21, 179, 1922, 2078
SspMI	CTAG	6 cut(s)	968, 1253, 1271, 1365, 1574, 1640
SstI	GAGCTC	2 cut(s)	189, 826
StuI	AGGCCT	1 cut(s)	1414
StyD4I	CCNGG	1 cut(s)	216
StyI	CCWWGG	2 cut(s)	366, 1409
TaaI	ACNGT	6 cut(s)	79, 250, 355, 671, 1028, 2129
TaiI	ACGT	4 cut(s)	74, 300, 464, 1899
TaqI	TCGA	6 cut(s)	67, 201, 244, 294, 375, 922
TauI	GCSGC	2 cut(s)	23, 182
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	3 cut(s)	42, 63, 2114
Tru9I	TTAA	3 cut(s)	42, 63, 2114
TscAI	CASTG	8 cut(s)	358, 667, 727, 1201, 1398, 1435, 1980, 2134
TseFI	GTSAC	5 cut(s)	137, 430, 656, 1913, 2149
Tsp45I	GTSAC	5 cut(s)	137, 430, 656, 1913, 2149
TspGWI	ACGGA	2 cut(s)	79, 641
TspRI	CASTG	8 cut(s)	358, 667, 727, 1201, 1398, 1435, 1980, 2134
VpaK11BI	GGWCC	3 cut(s)	1187, 1459, 1738
VspI	ATTAAT	1 cut(s)	63
XagI	CCTNNNNNAGG	2 cut(s)	1145, 1643
XapI	RAATTY	4 cut(s)	992, 1136, 1387, 1847
XceI	RCATGY	1 cut(s)	760
XmiI	GTMKAC	2 cut(s)	74, 294
XmnI	GAANNNNTTC	1 cut(s)	207
XspI	CTAG	6 cut(s)	968, 1253, 1271, 1365, 1574, 1640
Zsp2I	ATGCAT	3 cut(s)	30, 733, 1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.