pycom12g05820

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
5858910 .. 5862146
3237 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g05820.2

Sequence Viewer

Length: 1422 bp
ATGGAGAATTCTAAGGTACCTCTCCATCTCTGCCACGTCCACAAGCTTTCAAACTTCATCAACCGGACACATATCCTCGTCCACTCGATCGATCTAGTCTTCTTGATTTCCTATAGAGCCTCTTTCTTCTTCCAACACCCCAAAACCAAAGCCACAACCCTACCATGGCTTCTTATCTTTGCCTCGGAAGTCCTCCTTGCCTTCGAATGGCTCCTCAGCCAATCATACCGATGGCGGACAGTTTCGCGAACTGTGTTCCCAGAGAGGCTTCCGGAGGATGACAAGCTTCCGCCGATTGACGTGTTTATTTGCACCGCGGATCCGGAGAAGGAGCCAACCGTGGGGGTAATGAACACGGTGTTATCTGCCATGGCAATGGACTATCCACCAGAAAAGCTTCACGTGTATCTCTCTGATGACGCTGGTGCTGCCGTGACTTTGAATGGGATGAGAGAGGCTTGGAGGTTTGCAAAGTGGTGGCTTCCGTTTTGTAAGAGGTATGGAATCAAGTGTACGGCTCCGGAGGCTTATTTCTCTGCAGGAGAGGATGACGGGGATGAGAACGGTGGTTTTGGGGGCAGTGAGTTCGTACAAGAGAAAGAGCATATTAAGGAGAAATACGAGGCGTTTAAGAAAAGTGTGACAGAAAATGCAAGGATTGGGGACACTAGGAGCAATAGTCGTCGAGATCACTCTGCGGTAATTGAGGTAATACAAGAAACGTCCAGTGATAATGCTGATGCAATTCAAGCAAATGAAGCCAAAAATAAGCCTCTTCTTATTTATGTTTCTCGTGAAAAAAGACCTTCTCAACCTCATCATTTCAAGGCCGGAGCGCTCAATGTTCTTCTACGTGAGTCGGGAGTTATAAGCAATTCGCCTTACATATTAGGTTTAGATTGTGACATGCATTGCCATGATGCAAGTTCGGCTCGGCAAGCAATGTGTTTCCACCTTGACCCCAAGATATCACACTCTCTAGCATTTGTTCAATTTCCTCAAAAATTTTGCAACATCAGTAACAACGATATCTATGACAGTCAGTTGAGATCAGCATTTAAGGTGCTATGGAAAGGTTATGATGGGCTTGGAGGGCCATGCGTGTCTGGTACTGGCTACTACATCAAGAGGGTGTCCTTATGTGAAAGTTCCATTAGTGAAGCCGGGGATGCAATGAAACTTAGACAATGTTTTGGTCCATCCAATGAGTTCATCAAATCCCTCCGCCAAATAAACAAGCCTGATCGTATGTTCGTCCAAAGAAATAATGCACAGCCAATTGAAACCCAACTACTAGCATCTTGTGCTTATGAAGATGGCACCAAATGGGGCAAAGAGGTTGGTTTCTTATACGGTTCAGTGGTGGAAGATTACTTCACAGGGTTTCATTTACATTGCAAAGGTTGGATTTCAGTGTATTGA

Protein Analysis

474

Amino Acids

53.56

Weight (kDa)

6.63

Isoelectric Point (pI)

43.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 869
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 2 cut(s) 16, 1319
AccII CGCG 2 cut(s) 247, 317
AccIII TCCGGA 3 cut(s) 271, 322, 520
AciI CCGC 6 cut(s) 235, 290, 315, 317, 698, 1225
AclWI GGATC 2 cut(s) 314, 327
AcsI RAATTY 2 cut(s) 7, 1004
AcvI CACGTG 1 cut(s) 403
AfaI GTAC 4 cut(s) 18, 514, 591, 1111
AfeI AGCGCT 1 cut(s) 837
AfiI CCNNNNNNNGG 3 cut(s) 165, 207, 341
AflIII ACRYGT 2 cut(s) 300, 402
AgsI TTSAA 6 cut(s) 51, 442, 749, 826, 992, 1283
AjiI CACGTC 2 cut(s) 37, 301
AluBI AGCT 3 cut(s) 46, 286, 397
AluI AGCT 3 cut(s) 46, 286, 397
AlwI GGATC 2 cut(s) 314, 327
Aor13HI TCCGGA 3 cut(s) 271, 322, 520
Aor51HI AGCGCT 1 cut(s) 837
AoxI GGCC 2 cut(s) 828, 1094
ApeKI GCWGC 1 cut(s) 428
ApoI RAATTY 2 cut(s) 7, 1004
Asp700I GAANNNNTTC 1 cut(s) 396
Asp718I GGTACC 1 cut(s) 16
AspLEI GCGC 1 cut(s) 838
AspS9I GGNCC 2 cut(s) 1094, 1196
AsuC2I CCSGG 1 cut(s) 1165
AsuII TTCGAA 1 cut(s) 204
AvaII GGWCC 1 cut(s) 1196
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 2 cut(s) 16, 1319
BauI CACGAG 1 cut(s) 792
BbrPI CACGTG 1 cut(s) 403
BbsI GAAGAC 1 cut(s) 91
BbvCI CCTCAGC 1 cut(s) 215
BbvI GCAGC 1 cut(s) 415
BccI CCATC 5 cut(s) 33, 225, 1076, 1207, 1310
BceAI ACGGC 2 cut(s) 416, 531
BcgI CGANNNNNNTGC 2 cut(s) 568, 602
BcnI CCSGG 1 cut(s) 1165
BfaI CTAG 4 cut(s) 95, 669, 980, 1295
BfmI CTRYAG 2 cut(s) 112, 537
BfoI RGCGCY 1 cut(s) 839
BisI GCNGC 1 cut(s) 429
BlsI GCNGC 1 cut(s) 430
Bme1390I CCNGG 1 cut(s) 1165
Bme18I GGWCC 1 cut(s) 1196
BmgBI CACGTC 2 cut(s) 37, 301
BmgT120I GGNCC 2 cut(s) 1094, 1196
BmiI GGNNCC 6 cut(s) 18, 212, 321, 333, 519, 1321
BmrFI CCNGG 1 cut(s) 1165
BmsI GCATC 4 cut(s) 730, 910, 1159, 1307
BpiI GAAGAC 1 cut(s) 91
Bpu10I CCTNAGC 1 cut(s) 215
Bpu14I TTCGAA 1 cut(s) 204
BpuMI CCSGG 1 cut(s) 1165
Bsa29I ATCGAT 1 cut(s) 90
BsaAI YACGTR 2 cut(s) 403, 854
BsaJI CCNNGG 6 cut(s) 164, 183, 315, 339, 369, 1164
BsaWI WCCGGW 4 cut(s) 63, 271, 322, 520
BsaXI ACNNNNNCTCC 2 cut(s) 664, 694
Bsc4I CCNNNNNNNGG 3 cut(s) 165, 207, 341
Bse1I ACTGG 2 cut(s) 726, 1117
Bse3DI GCAATG 5 cut(s) 381, 910, 948, 1179, 1393
BseAI TCCGGA 3 cut(s) 271, 322, 520
BseCI ATCGAT 1 cut(s) 90
BseDI CCNNGG 6 cut(s) 164, 183, 315, 339, 369, 1164
BseGI GGATG 6 cut(s) 283, 453, 553, 562, 1174, 1199
BseLI CCNNNNNNNGG 3 cut(s) 165, 207, 341
BseMI GCAATG 5 cut(s) 381, 910, 948, 1179, 1393
BseMII CTCAG 1 cut(s) 229
BseNI ACTGG 2 cut(s) 726, 1117
BseRI GAGGAG 1 cut(s) 203
BseXI GCAGC 1 cut(s) 415
Bsh1236I CGCG 2 cut(s) 247, 317
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 2 cut(s) 830, 1096
BshNI GGYRCC 2 cut(s) 16, 1319
BshVI ATCGAT 1 cut(s) 90
BsiEI CGRYCG 1 cut(s) 90
BsiSI CCGG 6 cut(s) 64, 272, 323, 521, 831, 1164
BslFI GGGAC 1 cut(s) 677
BslI CCNNNNNNNGG 3 cut(s) 165, 207, 341
BsmFI GGGAC 1 cut(s) 677
BsnI GGCC 2 cut(s) 830, 1096
Bsp119I TTCGAA 1 cut(s) 204
Bsp13I TCCGGA 3 cut(s) 271, 322, 520
Bsp143I GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
Bsp19I CCATGG 2 cut(s) 164, 369
Bsp68I TCGCGA 1 cut(s) 247
BspACI CCGC 6 cut(s) 235, 290, 315, 317, 698, 1225
BspANI GGCC 2 cut(s) 830, 1096
BspCNI CTCAG 1 cut(s) 228
BspDI ATCGAT 1 cut(s) 90
BspEI TCCGGA 3 cut(s) 271, 322, 520
BspFNI CGCG 2 cut(s) 247, 317
BspLI GGNNCC 6 cut(s) 18, 212, 321, 333, 519, 1321
BspMAI CTGCAG 1 cut(s) 541
BspPI GGATC 2 cut(s) 314, 327
BspT104I TTCGAA 1 cut(s) 204
BspT107I GGYRCC 2 cut(s) 16, 1319
BsrDI GCAATG 5 cut(s) 381, 910, 948, 1179, 1393
BsrI ACTGG 2 cut(s) 726, 1117
BssECI CCNNGG 6 cut(s) 164, 183, 315, 339, 369, 1164
BssMI GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
BssSI CACGAG 1 cut(s) 792
BssT1I CCWWGG 2 cut(s) 164, 369
Bst2BI CACGAG 1 cut(s) 792
Bst4CI ACNGT 7 cut(s) 241, 253, 340, 358, 566, 1040, 1355
Bst6I CTCTTC 1 cut(s) 780
BstAPI GCANNNNNTGC 1 cut(s) 1304
BstBAI YACGTR 2 cut(s) 403, 854
BstBI TTCGAA 1 cut(s) 204
BstC8I GCNNGC 1 cut(s) 939
BstDEI CTNAG 3 cut(s) 12, 215, 1181
BstDSI CCRYGG 4 cut(s) 164, 315, 339, 369
BstF5I GGATG 6 cut(s) 283, 453, 553, 562, 1174, 1199
BstFNI CGCG 2 cut(s) 247, 317
BstH2I RGCGCY 1 cut(s) 839
BstHHI GCGC 1 cut(s) 838
BstKTI GATC 6 cut(s) 90, 94, 322, 691, 1052, 1246
BstMBI GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 9 cut(s) 428, 524, 749, 758, 929, 938, 1093, 1169, 1304
BstNSI RCATGY 1 cut(s) 910
BstSCI CCNGG 1 cut(s) 1163
BstSFI CTRYAG 2 cut(s) 112, 537
BstUI CGCG 2 cut(s) 247, 317
BstV1I GCAGC 1 cut(s) 415
BstV2I GAAGAC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 319
BstXI CCANNNNNNTGG 1 cut(s) 376
BstYI RGATCY 1 cut(s) 319
Bsu15I ATCGAT 1 cut(s) 90
BsuRI GGCC 2 cut(s) 830, 1096
BsuTUI ATCGAT 1 cut(s) 90
BtgI CCRYGG 4 cut(s) 164, 315, 339, 369
BtrI CACGTC 2 cut(s) 37, 301
BtsCI GGATG 6 cut(s) 283, 453, 553, 562, 1174, 1199
BtsI GCAGTG 1 cut(s) 586
BtsIMutI CAGTG 4 cut(s) 586, 733, 1365, 1419
BtuMI TCGCGA 1 cut(s) 247
Cac8I GCNNGC 1 cut(s) 939
CfoI GCGC 1 cut(s) 838
Cfr13I GGNCC 2 cut(s) 1094, 1196
Cfr42I CCGCGG 1 cut(s) 318
ClaI ATCGAT 1 cut(s) 90
CseI GACGC 1 cut(s) 428
Csp6I GTAC 4 cut(s) 17, 513, 590, 1110
CviAII CATG 5 cut(s) 165, 370, 907, 917, 1098
CviQI GTAC 4 cut(s) 17, 513, 590, 1110
DdeI CTNAG 3 cut(s) 12, 215, 1181
DpnI GATC 6 cut(s) 89, 93, 321, 690, 1051, 1245
DpnII GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
EciI GGCGGA 3 cut(s) 250, 279, 1214
Eco130I CCWWGG 2 cut(s) 164, 369
Eco32I GATATC 2 cut(s) 969, 1030
Eco47I GGWCC 1 cut(s) 1196
Eco47III AGCGCT 1 cut(s) 837
Eco72I CACGTG 1 cut(s) 403
EcoRI GAATTC 1 cut(s) 7
EcoRV GATATC 2 cut(s) 969, 1030
EcoT14I CCWWGG 2 cut(s) 164, 369
EcoT22I ATGCAT 1 cut(s) 912
ErhI CCWWGG 2 cut(s) 164, 369
FaeI CATG 5 cut(s) 168, 373, 910, 920, 1101
FalI AAGNNNNNCTT 2 cut(s) 180, 212
FaqI GGGAC 1 cut(s) 677
FatI CATG 5 cut(s) 164, 369, 906, 916, 1097
Fnu4HI GCNGC 1 cut(s) 429
FokI GGATG 6 cut(s) 290, 460, 560, 569, 1181, 1186
Fsp4HI GCNGC 1 cut(s) 429
FspBI CTAG 4 cut(s) 95, 669, 980, 1295
GlaI GCGC 1 cut(s) 837
GluI GCNGC 1 cut(s) 429
HaeII RGCGCY 1 cut(s) 839
HaeIII GGCC 2 cut(s) 830, 1096
HapII CCGG 6 cut(s) 64, 272, 323, 521, 831, 1164
HgaI GACGC 1 cut(s) 428
HhaI GCGC 1 cut(s) 838
Hin1II CATG 5 cut(s) 168, 373, 910, 920, 1101
Hin6I GCGC 1 cut(s) 836
HinP1I GCGC 1 cut(s) 836
HindIII AAGCTT 3 cut(s) 44, 284, 395
HinfI GANTC 2 cut(s) 504, 857
HpaII CCGG 6 cut(s) 64, 272, 323, 521, 831, 1164
Hpy166II GTNNAC 3 cut(s) 40, 82, 513
Hpy188I TCNGA 2 cut(s) 187, 415
Hpy188III TCNNGA 9 cut(s) 103, 246, 272, 323, 521, 686, 794, 861, 1126
Hpy8I GTNNAC 3 cut(s) 40, 82, 513
Hpy99I CGWCG 1 cut(s) 687
HpyAV CCTTC 3 cut(s) 211, 322, 816
HpyCH4III ACNGT 7 cut(s) 241, 253, 340, 358, 566, 1040, 1355
HpyCH4IV ACGT 5 cut(s) 36, 300, 402, 722, 853
HpyF10VI GCNNNNNNNGC 9 cut(s) 428, 524, 749, 758, 929, 938, 1093, 1169, 1304
HpyF3I CTNAG 3 cut(s) 12, 215, 1181
HpySE526I ACGT 5 cut(s) 36, 300, 402, 722, 853
Hsp92II CATG 5 cut(s) 168, 373, 910, 920, 1101
HspAI GCGC 1 cut(s) 836
Kpn2I TCCGGA 3 cut(s) 271, 322, 520
KpnI GGTACC 1 cut(s) 20
KspI CCGCGG 1 cut(s) 318
Kzo9I GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
LmnI GCTCC 5 cut(s) 216, 331, 523, 672, 833
Lsp1109I GCAGC 1 cut(s) 415
LweI GCATC 4 cut(s) 730, 910, 1159, 1307
MaeI CTAG 4 cut(s) 95, 669, 980, 1295
MaeII ACGT 5 cut(s) 36, 300, 402, 722, 853
MaeIII GTNAC 4 cut(s) 433, 640, 902, 1019
MalI GATC 6 cut(s) 89, 93, 321, 690, 1051, 1245
MboI GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
MboII GAAGA 7 cut(s) 91, 118, 121, 767, 839, 1325, 1379
MfeI CAATTG 1 cut(s) 1278
MflI RGATCY 1 cut(s) 319
MluCI AATT 7 cut(s) 7, 702, 744, 874, 992, 1004, 1278
MlyI GAGTC 1 cut(s) 866
MmeI TCCRAC 2 cut(s) 157, 1385
Mph1103I ATGCAT 1 cut(s) 912
MroI TCCGGA 3 cut(s) 271, 322, 520
MroXI GAANNNNTTC 1 cut(s) 396
MseI TTAA 3 cut(s) 609, 630, 1059
MslI CAYNNNNRTG 3 cut(s) 229, 374, 915
MspA1I CMGCKG 1 cut(s) 317
MspI CCGG 6 cut(s) 64, 272, 323, 521, 831, 1164
MspR9I CCNGG 1 cut(s) 1165
MunI CAATTG 1 cut(s) 1278
MvnI CGCG 2 cut(s) 247, 317
MwoI GCNNNNNNNGC 9 cut(s) 428, 524, 749, 758, 929, 938, 1093, 1169, 1304
NciI CCSGG 1 cut(s) 1165
NcoI CCATGG 2 cut(s) 164, 369
NdeII GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
NlaIII CATG 5 cut(s) 168, 373, 910, 920, 1101
NlaIV GGNNCC 6 cut(s) 18, 212, 321, 333, 519, 1321
NmeAIII GCCGAG 1 cut(s) 913
NmuCI GTSAC 3 cut(s) 433, 640, 902
NruI TCGCGA 1 cut(s) 247
NsiI ATGCAT 1 cut(s) 912
NspI RCATGY 1 cut(s) 910
NspV TTCGAA 1 cut(s) 204
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 1 cut(s) 504
PkrI GCNGC 1 cut(s) 430
Ple19I CGATCG 1 cut(s) 90
PleI GAGTC 1 cut(s) 865
PmaCI CACGTG 1 cut(s) 403
PmlI CACGTG 1 cut(s) 403
PpsI GAGTC 1 cut(s) 865
Ppu21I YACGTR 2 cut(s) 403, 854
PsiI TTATAA 1 cut(s) 869
PspCI CACGTG 1 cut(s) 403
PspN4I GGNNCC 6 cut(s) 18, 212, 321, 333, 519, 1321
PspPI GGNCC 2 cut(s) 1094, 1196
PstI CTGCAG 1 cut(s) 541
PsuI RGATCY 1 cut(s) 319
PvuI CGATCG 1 cut(s) 90
RruI TCGCGA 1 cut(s) 247
RsaI GTAC 4 cut(s) 18, 514, 591, 1111
RsaNI GTAC 4 cut(s) 17, 513, 590, 1110
RseI CAYNNNNRTG 3 cut(s) 229, 374, 915
SacII CCGCGG 1 cut(s) 318
SaqAI TTAA 3 cut(s) 609, 630, 1059
SatI GCNGC 1 cut(s) 429
Sau3AI GATC 6 cut(s) 87, 91, 319, 688, 1049, 1243
Sau96I GGNCC 2 cut(s) 1094, 1196
SchI GAGTC 1 cut(s) 866
ScrFI CCNGG 1 cut(s) 1165
SfaNI GCATC 4 cut(s) 730, 910, 1159, 1307
SfcI CTRYAG 2 cut(s) 112, 537
Sfr303I CCGCGG 1 cut(s) 318
SfuI TTCGAA 1 cut(s) 204
SgrBI CCGCGG 1 cut(s) 318
SinI GGWCC 1 cut(s) 1196
SmiMI CAYNNNNRTG 3 cut(s) 229, 374, 915
Sse9I AATT 7 cut(s) 7, 702, 744, 874, 992, 1004, 1278
SsiI CCGC 6 cut(s) 235, 290, 315, 317, 698, 1225
SspMI CTAG 4 cut(s) 95, 669, 980, 1295
StyD4I CCNGG 1 cut(s) 1163
StyI CCWWGG 2 cut(s) 164, 369
TaaI ACNGT 7 cut(s) 241, 253, 340, 358, 566, 1040, 1355
TaiI ACGT 5 cut(s) 39, 303, 405, 725, 856
TaqI TCGA 4 cut(s) 86, 90, 204, 685
TasI AATT 7 cut(s) 7, 702, 744, 874, 992, 1004, 1278
TfiI GAWTC 1 cut(s) 504
Tru1I TTAA 3 cut(s) 609, 630, 1059
Tru9I TTAA 3 cut(s) 609, 630, 1059
TscAI CASTG 4 cut(s) 586, 733, 1365, 1419
TseFI GTSAC 3 cut(s) 433, 640, 902
TseI GCWGC 1 cut(s) 428
Tsp45I GTSAC 3 cut(s) 433, 640, 902
TspDTI ATGAA 7 cut(s) 46, 365, 771, 1190, 1201, 1326, 1376
TspGWI ACGGA 1 cut(s) 474
TspRI CASTG 4 cut(s) 586, 733, 1365, 1419
VpaK11BI GGWCC 1 cut(s) 1196
XapI RAATTY 2 cut(s) 7, 1004
XceI RCATGY 1 cut(s) 910
XmnI GAANNNNTTC 1 cut(s) 396
XspI CTAG 4 cut(s) 95, 669, 980, 1295
Zsp2I ATGCAT 1 cut(s) 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.