Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Reverse (-)

59487015 .. 59494281

Gene Structure 7267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009881

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGATCAGCGTTCTAATGCCCCTATGCATCTCTGCCATGTCAACAGGCTCACAATCTTCATTAATCGAACCTATACAGCCATACACTCCGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTCTCTTCTTCGATGACACCAAATCGCCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTCTCTTCCTTCGAATGGCTTCTAAGCCAGGCATATCGGTGGAGGCCCGTCTCTCGAACTGTGTTCCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAGTCGACGTGTTCATTTGCACCGCTGATCCGGAGAAGGAGCCACCCGTGGAGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCGAGAAGCTTCACGTGTATTTGTCAGATGATGGCGGTGCTAATGAGACTCTGAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTACAACATCAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGTAGCTGAGGATGAGAATGAAGATGATGATTTGGGGGGTACTGATTTCATACAAGAGAGACAAATTGTTCAGGAAAAATATGAGGTGTTTGCGGAAAGAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTGGAGATCATTCTGCAGTCGTTGAGGTGATACAAGAAAGTTCTAGTAAGCATGCATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTTCTTCGGGTATCTGGTGTGATCAGTAACTCTCCCTTCATATTAGGGCTTGATTGTGACATGTATTGCAATAATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCATCTAGATCCCAAGCTCTCACCTACGCTAGCACTTGTGCAATTCCCTCAAAAATTCCACAACATTAGTAAGAATGACATCTACGACAGTCAGTTGAGAGAGTTGTTTTCGGTGCTATGGCAAGGTTTTGATGGACTTCAAGGGCCAAGCGTATCCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATTCCTAAAGGAGGATCATGAGGATCTTATGGAACTTAGACAATCTGTTGGTCCATCAAGTGAGTTCATAAAATCCCTACTTGGAAACTACAATCCTAATATGAAAATGGCACAGCTAGCTGAGACCCAACAACTAGCCTCCTGTACCTATGAAGATGGCTCCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGTGGAAGATTATTTCACAGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGCGGCACCACTAATTTGAATGACGTTTTGGTCCAAAGGACAAGATGGAGTTCTGGGTTGGTAGATGTTGCCATCTCCAGATATTGCCCTCTTATATATGGTCTTTCTAAAATGTCTTTCCTTGAAAGTATGTGCTATGCATGGCTAGCAGTTTACCCTATTTGCCGGTTCTTCTCACTCTGGTGCTTTGCAACTATACCTCAGCTTTGCCTAGTCAAGGGCATTTCCCTGTACCCTGAGGTCTCAAGTTGGTATTTTTGGATATTTTCTCTTGTATTCCTCTCATCTGTTTTGAGACATTTACACGAGGTCCTCACAACAGAAGCGTCATTGCAACATTGGATATACGAGCAAAGAATTTGGATGATGAAAGCAATTACATCTCACTTATATGGTAGTCTTGATGCTTTTATGAAGAAATTTGGTTTGAGGGAAGCAAGTTTCTTCCCAACAAATAAAGCTAATGACGTTGAGCAACTCAAGCGTCACACCGCGGGGGTATTTGATTTCCGAACCTCAGCACTTTTTCTTGTTCCATTGGCTTCCCTGGTTATCTTGAACATGGCCTCTCTTTGTGTGGGCATTAGCAGAGTGATCTTTCAGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCAGTGGTGGTCAATTATCCTATTATAGAAGGAATGCTAATAAGGAAAGACAGTGGTCGCATTCCACCATCAGTCACCCTATTGTCTGCTATAGCTTCAATCATTTTCTGCGTTTTGGGTTCAATTATTTTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

738

Amino Acids

83.79

Weight (kDa)

6.28

Isoelectric Point (pI)

47.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 378	1.1e-80	Cellulose synthase
Cellulose_synt	PF03552	387 - 731	5e-58	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1457
Acc36I	ACCTGC	1 cut(s)	501
AccB1I	GGYRCC	1 cut(s)	1433
AccI	GTMKAC	1 cut(s)	294
AccII	CGCG	3 cut(s)	783, 1331, 1922
AccIII	TCCGGA	1 cut(s)	319
AciI	CCGC	8 cut(s)	179, 312, 420, 472, 626, 1431, 1920, 1922
AclWI	GGATC	5 cut(s)	12, 311, 941, 1158, 1167
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	5 cut(s)	992, 1136, 1387, 1785, 1847
AcvI	CACGTG	1 cut(s)	400
AfaI	GTAC	5 cut(s)	497, 574, 1099, 1282, 1661
AfiI	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
AflIII	ACRYGT	4 cut(s)	297, 399, 894, 1329
AgsI	TTSAA	8 cut(s)	737, 814, 1079, 1447, 1553, 1987, 2175, 2199
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	216, 1974
AjuI	GAANNNNNNNTTGG	2 cut(s)	1439, 1471
AleI	CACNNNNGTG	1 cut(s)	1609
Alw21I	GWGCWC	2 cut(s)	189, 826
Alw26I	GTCTC	9 cut(s)	196, 244, 425, 519, 586, 781, 1253, 1675, 1717
AlwI	GGATC	5 cut(s)	12, 311, 941, 1158, 1167
AlwNI	CAGNNNCTG	1 cut(s)	539
Ama87I	CYCGRG	1 cut(s)	386
Aor13HI	TCCGGA	1 cut(s)	319
AoxI	GGCC	5 cut(s)	180, 233, 1082, 1412, 1992
ApeKI	GCWGC	1 cut(s)	1428
ApoI	RAATTY	5 cut(s)	992, 1136, 1387, 1785, 1847
AseI	ATTAAT	1 cut(s)	63
Asp700I	GAANNNNTTC	1 cut(s)	207
AspS9I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
AsuC2I	CCSGG	1 cut(s)	257
AsuHPI	GGTGA	6 cut(s)	355, 668, 715, 951, 1319, 2143
AsuII	TTCGAA	1 cut(s)	201
AsuNHI	GCTAGC	4 cut(s)	967, 1252, 1364, 1573
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	3 cut(s)	1187, 1459, 1738
AxyI	CCTNAGG	1 cut(s)	1665
BanI	GGYRCC	1 cut(s)	1433
BanII	GRGCYC	2 cut(s)	189, 826
BauI	CACGAG	1 cut(s)	1733
BbrPI	CACGTG	1 cut(s)	400
BbsI	GAAGAC	1 cut(s)	2053
Bbv12I	GWGCWC	2 cut(s)	189, 826
BbvCI	CCTCAGC	3 cut(s)	540, 1629, 1945
BbvI	GCAGC	1 cut(s)	1440
BciT130I	CCWGG	2 cut(s)	218, 1976
BciVI	GTATCC	1 cut(s)	1102
BclI	TGATCA	1 cut(s)	855
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	9 cut(s)	196, 244, 425, 519, 586, 781, 1253, 1675, 1717
BfaI	CTAG	8 cut(s)	720, 944, 968, 1253, 1271, 1365, 1574, 1640
BfmI	CTRYAG	5 cut(s)	115, 288, 690, 1335, 2166
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	1 cut(s)	1102
BisI	GCNGC	3 cut(s)	180, 1429, 1432
BlsI	GCNGC	3 cut(s)	181, 1430, 1433
Bme1390I	CCNGG	3 cut(s)	218, 257, 1976
Bme18I	GGWCC	3 cut(s)	1187, 1459, 1738
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
BmiI	GGNNCC	3 cut(s)	330, 1297, 1435
BmrFI	CCNGG	3 cut(s)	218, 257, 1976
BmrI	ACTGGG	1 cut(s)	672
BmsI	GCATC	2 cut(s)	37, 1822
BmtI	GCTAGC	4 cut(s)	971, 1256, 1368, 1577
BmuI	ACTGGG	1 cut(s)	672
BoxI	GACNNNNGTC	1 cut(s)	2130
BpiI	GAAGAC	1 cut(s)	2053
BplI	GAGNNNNNCTC	4 cut(s)	111, 143, 176, 208
BpmI	CTGGAG	2 cut(s)	840, 1489
Bpu10I	CCTNAGC	3 cut(s)	540, 1629, 1945
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	2 cut(s)	1657, 1892
BpuMI	CCSGG	1 cut(s)	257
BsaAI	YACGTR	1 cut(s)	400
BsaI	GGTCTC	3 cut(s)	519, 1253, 1675
BsaJI	CCNNGG	5 cut(s)	336, 366, 1409, 1920, 1974
BsaWI	WCCGGW	2 cut(s)	319, 1094
BsaXI	ACNNNNNCTCC	2 cut(s)	2033, 2063
Bsc4I	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
Bse118I	RCCGGY	1 cut(s)	1593
Bse1I	ACTGG	2 cut(s)	667, 1105
Bse21I	CCTNAGG	1 cut(s)	1665
Bse3DI	GCAATG	3 cut(s)	936, 1372, 1757
BseAI	TCCGGA	1 cut(s)	319
BseBI	CCWGG	2 cut(s)	218, 1976
BseDI	CCNNGG	5 cut(s)	336, 366, 1409, 1920, 1974
BseGI	GGATG	2 cut(s)	550, 1797
BseLI	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
BseMI	GCAATG	3 cut(s)	936, 1372, 1757
BseMII	CTCAG	7 cut(s)	531, 546, 1248, 1430, 1643, 1656, 1959
BseNI	ACTGG	2 cut(s)	667, 1105
BseX3I	CGGCCG	1 cut(s)	180
BseXI	GCAGC	1 cut(s)	1440
BsgI	GTGCAG	1 cut(s)	529
Bsh1236I	CGCG	3 cut(s)	783, 1331, 1922
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
BshNI	GGYRCC	1 cut(s)	1433
BsiEI	CGRYCG	1 cut(s)	183
BsiHKAI	GWGCWC	2 cut(s)	189, 826
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	5 cut(s)	257, 269, 320, 1095, 1594
BslI	CCNNNNNNNGG	3 cut(s)	204, 1147, 1645
BsmAI	GTCTC	9 cut(s)	196, 244, 425, 519, 586, 781, 1253, 1675, 1717
BsmBI	CGTCTC	2 cut(s)	196, 244
BsmI	GAATGC	2 cut(s)	2115, 2136
BsnI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
Bso31I	GGTCTC	3 cut(s)	519, 1253, 1675
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	2 cut(s)	189, 826
Bsp13I	TCCGGA	1 cut(s)	319
Bsp143I	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
Bsp19I	CCATGG	1 cut(s)	366
Bsp68I	TCGCGA	1 cut(s)	783
BspACI	CCGC	8 cut(s)	179, 312, 420, 472, 626, 1431, 1920, 1922
BspANI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
BspCNI	CTCAG	7 cut(s)	532, 545, 1249, 1429, 1642, 1657, 1958
BspEI	TCCGGA	1 cut(s)	319
BspFNI	CGCG	3 cut(s)	783, 1331, 1922
BspHI	TCATGA	1 cut(s)	1153
BspLI	GGNNCC	3 cut(s)	330, 1297, 1435
BspMAI	CTGCAG	2 cut(s)	292, 694
BspMI	ACCTGC	1 cut(s)	501
BspOI	GCTAGC	4 cut(s)	971, 1256, 1368, 1577
BspPI	GGATC	5 cut(s)	12, 311, 941, 1158, 1167
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	1 cut(s)	1433
BspTNI	GGTCTC	3 cut(s)	519, 1253, 1675
BsrDI	GCAATG	3 cut(s)	936, 1372, 1757
BsrFI	RCCGGY	1 cut(s)	1593
BsrI	ACTGG	2 cut(s)	667, 1105
BssAI	RCCGGY	1 cut(s)	1593
BssECI	CCNNGG	5 cut(s)	336, 366, 1409, 1920, 1974
BssMI	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
BssSI	CACGAG	1 cut(s)	1733
BssT1I	CCWWGG	2 cut(s)	366, 1409
Bst2BI	CACGAG	1 cut(s)	1733
Bst2UI	CCWGG	2 cut(s)	218, 1976
Bst4CI	ACNGT	4 cut(s)	250, 355, 1028, 2129
Bst6I	CTCTTC	3 cut(s)	134, 199, 1305
BstBAI	YACGTR	1 cut(s)	400
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	7 cut(s)	729, 927, 969, 1254, 1366, 1370, 1575
BstDEI	CTNAG	9 cut(s)	212, 532, 540, 1172, 1257, 1416, 1629, 1665, 1945
BstDSI	CCRYGG	3 cut(s)	336, 366, 1920
BstENI	CCTNNNNNAGG	2 cut(s)	1145, 1643
BstF5I	GGATG	2 cut(s)	550, 1797
BstFNI	CGCG	3 cut(s)	783, 1331, 1922
BstKTI	GATC	8 cut(s)	7, 319, 685, 858, 949, 1153, 1162, 2025
BstMAI	GTCTC	9 cut(s)	196, 244, 425, 519, 586, 781, 1253, 1675, 1717
BstMBI	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	5 cut(s)	926, 1253, 1374, 1574, 1909
BstNI	CCWGG	2 cut(s)	218, 1976
BstNSI	RCATGY	3 cut(s)	731, 760, 898
BstPAI	GACNNNNGTC	1 cut(s)	2130
BstSCI	CCNGG	3 cut(s)	216, 255, 1974
BstSFI	CTRYAG	5 cut(s)	115, 288, 690, 1335, 2166
BstUI	CGCG	3 cut(s)	783, 1331, 1922
BstV1I	GCAGC	1 cut(s)	1440
BstV2I	GAAGAC	1 cut(s)	2053
BstX2I	RGATCY	2 cut(s)	946, 1159
BstYI	RGATCY	2 cut(s)	946, 1159
BstZI	CGGCCG	1 cut(s)	180
Bsu36I	CCTNAGG	1 cut(s)	1665
BsuI	GTATCC	1 cut(s)	1102
BsuRI	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
BtgI	CCRYGG	3 cut(s)	336, 366, 1920
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	2 cut(s)	550, 1797
BtsI	GCAGTG	1 cut(s)	2085
BtsIMutI	CAGTG	5 cut(s)	351, 660, 1398, 2085, 2134
BtuMI	TCGCGA	1 cut(s)	783
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	7 cut(s)	729, 927, 969, 1254, 1366, 1370, 1575
CaiI	CAGNNNCTG	1 cut(s)	539
CciI	TCATGA	1 cut(s)	1153
Cfr10I	RCCGGY	1 cut(s)	1593
Cfr13I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
Cfr42I	CCGCGG	1 cut(s)	1923
CseI	GACGC	3 cut(s)	1320, 1743, 1901
Csp6I	GTAC	5 cut(s)	496, 573, 1098, 1281, 1660
CviQI	GTAC	5 cut(s)	496, 573, 1098, 1281, 1660
DdeI	CTNAG	9 cut(s)	212, 532, 540, 1172, 1257, 1416, 1629, 1665, 1945
DpnI	GATC	8 cut(s)	6, 318, 684, 857, 948, 1152, 1161, 2024
DpnII	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
DrdI	GACNNNNNNGTC	1 cut(s)	1457
DseDI	GACNNNNNNGTC	1 cut(s)	1457
EaeI	YGGCCR	1 cut(s)	180
EagI	CGGCCG	1 cut(s)	180
Eam1104I	CTCTTC	3 cut(s)	134, 199, 1305
EarI	CTCTTC	3 cut(s)	134, 199, 1305
Ecl136II	GAGCTC	2 cut(s)	187, 824
EclXI	CGGCCG	1 cut(s)	180
Eco130I	CCWWGG	2 cut(s)	366, 1409
Eco147I	AGGCCT	1 cut(s)	1414
Eco24I	GRGCYC	2 cut(s)	189, 826
Eco31I	GGTCTC	3 cut(s)	519, 1253, 1675
Eco47I	GGWCC	3 cut(s)	1187, 1459, 1738
Eco52I	CGGCCG	1 cut(s)	180
Eco53kI	GAGCTC	2 cut(s)	187, 824
Eco72I	CACGTG	1 cut(s)	400
Eco81I	CCTNAGG	1 cut(s)	1665
Eco88I	CYCGRG	1 cut(s)	386
EcoICRI	GAGCTC	2 cut(s)	187, 824
EcoNI	CCTNNNNNAGG	2 cut(s)	1145, 1643
EcoO109I	RGGNCCY	1 cut(s)	1738
EcoRI	GAATTC	1 cut(s)	1387
EcoRII	CCWGG	2 cut(s)	216, 1974
EcoT14I	CCWWGG	2 cut(s)	366, 1409
EcoT22I	ATGCAT	3 cut(s)	30, 733, 1570
EcoT38I	GRGCYC	2 cut(s)	189, 826
ErhI	CCWWGG	2 cut(s)	366, 1409
Esp3I	CGTCTC	2 cut(s)	196, 244
FauI	CCCGC	1 cut(s)	1915
FbaI	TGATCA	1 cut(s)	855
FblI	GTMKAC	1 cut(s)	294
Fnu4HI	GCNGC	3 cut(s)	180, 1429, 1432
FokI	GGATG	2 cut(s)	557, 1804
FriOI	GRGCYC	2 cut(s)	189, 826
Fsp4HI	GCNGC	3 cut(s)	180, 1429, 1432
FspBI	CTAG	8 cut(s)	720, 944, 968, 1253, 1271, 1365, 1574, 1640
GluI	GCNGC	3 cut(s)	180, 1429, 1432
GsuI	CTGGAG	2 cut(s)	840, 1489
HaeIII	GGCC	5 cut(s)	182, 235, 1084, 1414, 1994
HapII	CCGG	5 cut(s)	257, 269, 320, 1095, 1594
HgaI	GACGC	3 cut(s)	1320, 1743, 1901
HincII	GTYRAC	2 cut(s)	43, 295
HindII	GTYRAC	2 cut(s)	43, 295
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	2 cut(s)	433, 478
HpaII	CCGG	5 cut(s)	257, 269, 320, 1095, 1594
HphI	GGTGA	6 cut(s)	355, 668, 715, 951, 1319, 2143
Hpy166II	GTNNAC	3 cut(s)	43, 295, 1582
Hpy188I	TCNGA	3 cut(s)	412, 438, 1940
Hpy8I	GTNNAC	3 cut(s)	43, 295, 1582
Hpy99I	CGWCG	2 cut(s)	95, 299
HpyAV	CCTTC	5 cut(s)	208, 319, 804, 880, 2099
HpyCH4III	ACNGT	4 cut(s)	250, 355, 1028, 2129
HpyCH4IV	ACGT	5 cut(s)	297, 399, 461, 1452, 1896
HpyF10VI	GCNNNNNNNGC	5 cut(s)	926, 1253, 1374, 1574, 1909
HpyF3I	CTNAG	9 cut(s)	212, 532, 540, 1172, 1257, 1416, 1629, 1665, 1945
HpySE526I	ACGT	5 cut(s)	297, 399, 461, 1452, 1896
Kpn2I	TCCGGA	1 cut(s)	319
Ksp22I	TGATCA	1 cut(s)	855
KspI	CCGCGG	1 cut(s)	1923
Kzo9I	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
LmnI	GCTCC	4 cut(s)	328, 666, 821, 1301
Lsp1109I	GCAGC	1 cut(s)	1440
LweI	GCATC	2 cut(s)	37, 1822
MaeI	CTAG	8 cut(s)	720, 944, 968, 1253, 1271, 1365, 1574, 1640
MaeII	ACGT	5 cut(s)	297, 399, 461, 1452, 1896
MaeIII	GTNAC	5 cut(s)	656, 860, 890, 1913, 2149
MalI	GATC	8 cut(s)	6, 318, 684, 857, 948, 1152, 1161, 2024
MboI	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
MflI	RGATCY	2 cut(s)	946, 1159
MhlI	GDGCHC	2 cut(s)	189, 826
MluI	ACGCGT	1 cut(s)	1329
MlyI	GAGTC	1 cut(s)	427
MmeI	TCCRAC	2 cut(s)	1364, 2019
Mph1103I	ATGCAT	3 cut(s)	30, 733, 1570
MroI	TCCGGA	1 cut(s)	319
MroXI	GAANNNNTTC	1 cut(s)	207
MseI	TTAA	2 cut(s)	63, 2207
MslI	CAYNNNNRTG	3 cut(s)	226, 1609, 1818
MspA1I	CMGCKG	3 cut(s)	314, 1431, 1922
MspI	CCGG	5 cut(s)	257, 269, 320, 1095, 1594
MspR9I	CCNGG	3 cut(s)	218, 257, 1976
Mva1269I	GAATGC	2 cut(s)	2115, 2136
MvaI	CCWGG	2 cut(s)	218, 1976
MvnI	CGCG	3 cut(s)	783, 1331, 1922
MwoI	GCNNNNNNNGC	5 cut(s)	926, 1253, 1374, 1574, 1909
NciI	CCSGG	1 cut(s)	257
NcoI	CCATGG	1 cut(s)	366
NdeII	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
NheI	GCTAGC	4 cut(s)	967, 1252, 1364, 1573
NlaIV	GGNNCC	3 cut(s)	330, 1297, 1435
NmeAIII	GCCGAG	2 cut(s)	208, 901
NmuCI	GTSAC	4 cut(s)	656, 890, 1913, 2149
NruI	TCGCGA	1 cut(s)	783
NsiI	ATGCAT	3 cut(s)	30, 733, 1570
NspI	RCATGY	3 cut(s)	731, 760, 898
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	1 cut(s)	1609
PaeI	GCATGC	1 cut(s)	731
PagI	TCATGA	1 cut(s)	1153
PceI	AGGCCT	1 cut(s)	1414
PciI	ACATGT	1 cut(s)	894
PctI	GAATGC	2 cut(s)	2115, 2136
PdmI	GAANNNNTTC	1 cut(s)	207
PfeI	GAWTC	1 cut(s)	478
PfoI	TCCNGGA	1 cut(s)	255
PkrI	GCNGC	3 cut(s)	181, 1430, 1433
PleI	GAGTC	1 cut(s)	427
PmaCI	CACGTG	1 cut(s)	400
PmlI	CACGTG	1 cut(s)	400
PpsI	GAGTC	1 cut(s)	427
Ppu21I	YACGTR	1 cut(s)	400
PpuMI	RGGWCCY	1 cut(s)	1738
PscI	ACATGT	1 cut(s)	894
PshAI	GACNNNNGTC	1 cut(s)	2130
PshBI	ATTAAT	1 cut(s)	63
Psp124BI	GAGCTC	2 cut(s)	189, 826
Psp5II	RGGWCCY	1 cut(s)	1738
Psp6I	CCWGG	2 cut(s)	216, 1974
PspCI	CACGTG	1 cut(s)	400
PspGI	CCWGG	2 cut(s)	216, 1974
PspN4I	GGNNCC	3 cut(s)	330, 1297, 1435
PspPI	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
PspPPI	RGGWCCY	1 cut(s)	1738
PstI	CTGCAG	2 cut(s)	292, 694
PstNI	CAGNNNCTG	1 cut(s)	539
PsuI	RGATCY	2 cut(s)	946, 1159
RruI	TCGCGA	1 cut(s)	783
RsaI	GTAC	5 cut(s)	497, 574, 1099, 1282, 1661
RsaNI	GTAC	5 cut(s)	496, 573, 1098, 1281, 1660
RseI	CAYNNNNRTG	3 cut(s)	226, 1609, 1818
SacI	GAGCTC	2 cut(s)	189, 826
SacII	CCGCGG	1 cut(s)	1923
SalI	GTCGAC	1 cut(s)	293
SaqAI	TTAA	2 cut(s)	63, 2207
SatI	GCNGC	3 cut(s)	180, 1429, 1432
Sau3AI	GATC	8 cut(s)	4, 316, 682, 855, 946, 1150, 1159, 2022
Sau96I	GGNCC	5 cut(s)	234, 1082, 1187, 1459, 1738
SchI	GAGTC	1 cut(s)	427
ScrFI	CCNGG	3 cut(s)	218, 257, 1976
SduI	GDGCHC	2 cut(s)	189, 826
SfaNI	GCATC	2 cut(s)	37, 1822
SfcI	CTRYAG	5 cut(s)	115, 288, 690, 1335, 2166
Sfr303I	CCGCGG	1 cut(s)	1923
SfuI	TTCGAA	1 cut(s)	201
SgrBI	CCGCGG	1 cut(s)	1923
SinI	GGWCC	3 cut(s)	1187, 1459, 1738
SmiMI	CAYNNNNRTG	3 cut(s)	226, 1609, 1818
SmlI	CTYRAG	2 cut(s)	1672, 1907
SmoI	CTYRAG	2 cut(s)	1672, 1907
SphI	GCATGC	1 cut(s)	731
SseBI	AGGCCT	1 cut(s)	1414
SsiI	CCGC	8 cut(s)	179, 312, 420, 472, 626, 1431, 1920, 1922
SspMI	CTAG	8 cut(s)	720, 944, 968, 1253, 1271, 1365, 1574, 1640
SstI	GAGCTC	2 cut(s)	189, 826
StuI	AGGCCT	1 cut(s)	1414
StyD4I	CCNGG	3 cut(s)	216, 255, 1974
StyI	CCWWGG	2 cut(s)	366, 1409
TaaI	ACNGT	4 cut(s)	250, 355, 1028, 2129
TaiI	ACGT	5 cut(s)	300, 402, 464, 1455, 1899
TaqI	TCGA	6 cut(s)	67, 135, 201, 244, 294, 375
TauI	GCSGC	2 cut(s)	182, 1434
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	2 cut(s)	63, 2207
Tru9I	TTAA	2 cut(s)	63, 2207
TscAI	CASTG	5 cut(s)	358, 667, 1398, 2085, 2134
TseFI	GTSAC	4 cut(s)	656, 890, 1913, 2149
TseI	GCWGC	1 cut(s)	1428
Tsp45I	GTSAC	4 cut(s)	656, 890, 1913, 2149
TspGWI	ACGGA	1 cut(s)	79
TspRI	CASTG	5 cut(s)	358, 667, 1398, 2085, 2134
VpaK11BI	GGWCC	3 cut(s)	1187, 1459, 1738
VspI	ATTAAT	1 cut(s)	63
XagI	CCTNNNNNAGG	2 cut(s)	1145, 1643
XapI	RAATTY	5 cut(s)	992, 1136, 1387, 1785, 1847
XbaI	TCTAGA	1 cut(s)	943
XceI	RCATGY	3 cut(s)	731, 760, 898
XmiI	GTMKAC	1 cut(s)	294
XmnI	GAANNNNTTC	1 cut(s)	207
XspI	CTAG	8 cut(s)	720, 944, 968, 1253, 1271, 1365, 1574, 1640
Zsp2I	ATGCAT	3 cut(s)	30, 733, 1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.