Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

7848091 .. 7884619

Gene Structure 36529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG038800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGATGCTCCTTTATAAGGAGTGGATAAGAGAGGTAGACACCAAGCTGCTCAAACCAAAAAAATTAGTTAGAGAAGCTATGGATCAGACTTCTAATGCCCCTCTGCATCTCTGCCATGTCAACATGCTCACAATTTTCATCAATCGAACGTATGCAGTCATACACTCCGTCGCTTTATCATTCCTGCTTTATTATCGAGCCTCTTTCTTCTTCCAGGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCCTCTTTTCCTTCGAATGGCTTCTAACCCAGGCATATCGGTGGAGGCCCGTCTCCCGAACTGTGTTCCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAATCGACGTGTTCATTTGCACCGCTGATCCTGATCTGGAGCCAACCGTGGCGGTGATGGACACTGTAATATCAGCCATGGCACTCGATTATCCACCCGAGAAGCTTCACGTATATTTGTCAGATGATGCCGGCGCTGATGTGACTCTGAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTATAAGATTAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGCAGCAGAGGATGAGAATGAAGATGGTGATTTTGATTTCGTACAAGAGAGGCAAATTGTTCAGGAAAAATATAAGGTGTTTAAGGAAAGAGTAAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTGGAGATCATTCTGCAGTTATTGAGGTGATACAAGAAAGTTCTAGTAATCATGCATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTCGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTATCAATGTTCTTCTTCGGGTATCCGGTGTGATAAGTAATTCTCCCTTCATATTAGGGCTTGACTGTGACACGAATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCATTTGTTCAATTCCCTCAGAAATTCCACAACATCAGTAAGAATGACATCTACGACAGTCAGTATAGATCGATCTTTAAGGTGCTATGGCAAGGTTTGGATGGACTTCAAGGGCCAGCCATGTGCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAGGATCATAAGGATCTTATGGAACTTAGACAATCTGTTGGTCCATCAAATGAGTTCATAACATCCCTGCTTGGAAACTACAATCCTAATATGAAAATGGCAGAGCTAGCTGAGACCCAACAGCTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGCAGAAGATTTTTTGACTACGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGAGGCTTCACTAATTTAAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCAGCGGTGATTGCTATTTCCATCTCCAAATACTGCCCTCTTATATATGACCTTTCTCAAATATCTTTCCTTCAACGTATGTGCTATACATTGTTCGCAATTTCGCCTATTTGCCAGTTCTTCTCACTCTGGTGCCTTGCAACTATACCTCAGCTTTGCCTAGTCAATGGCATTTCCCTGTACCCTGAGGTTTCAAATTCATATTTTTGGATATTTTCTTTTGTATTCTTGTCATCTGTTTCGAGACATTTATACGAGGTCCTGACAACTGGCGCATCGTTACAACATTGGGTCTACGAGCAAAGAATTTGGATGATGAATGCAGTTACATCTCACTTATATGGTACTCTTGATGCTTTTATAAAGAAATTTGGCTTGAGGGAAGCAAGTTTCTCTATATCAAATAAAGTTGATGACGTTGAGCAACTCAAGCGTTACAATGCGGGGGTATTTGATTTCCAAACCTCAGCACTTTTTCTTGTTCCATTAGCATCATTGGTTATCTTGAACATGGCCTCCCTTTTTGTGGGCATTGCCAGAGTGATCTTTCTGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCGGTGGTCGTCAATTACCCTATTATAGAAGGAATGCTATTAAGGAAAGACAATGGTCGCATTCCACCATCAATCACCCTATTGTCTGCTACAGCTTCAATCATTTTCTGTGTTTTGGGTTCAATTATTTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

760

Amino Acids

86.58

Weight (kDa)

6.51

Isoelectric Point (pI)

37.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	124 - 408	1.8e-78	Cellulose synthase
Cellulose_synt	PF03552	410 - 754	2.6e-54	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	15, 1910
AasI	GACNNNNNNGTC	1 cut(s)	1526
Acc36I	ACCTGC	1 cut(s)	579
AccB1I	GGYRCC	2 cut(s)	1364, 1680
AccI	GTMKAC	2 cut(s)	36, 1842
AccII	CGCG	2 cut(s)	852, 1400
AciI	CCGC	8 cut(s)	257, 390, 419, 550, 1164, 1553, 1991, 2147
AclWI	GGATC	6 cut(s)	90, 389, 971, 1010, 1227, 1236
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	5 cut(s)	1061, 1456, 1744, 1854, 1916
AfaI	GTAC	5 cut(s)	654, 1168, 1351, 1730, 1894
AfiI	CCNNNNNNNGG	4 cut(s)	16, 282, 1216, 2074
AflIII	ACRYGT	2 cut(s)	375, 1398
AgsI	TTSAA	9 cut(s)	806, 883, 1049, 1148, 1622, 1743, 2056, 2244, 2268
AjiI	CACGTC	1 cut(s)	376
AjnI	CCWGG	2 cut(s)	213, 294
AleI	CACNNNNGTG	1 cut(s)	1678
AloI	GAACNNNNNNTCC	2 cut(s)	2048, 2080
Alw21I	GWGCWC	1 cut(s)	267
Alw26I	GTCTC	5 cut(s)	322, 597, 850, 1322, 1786
AlwI	GGATC	6 cut(s)	90, 389, 971, 1010, 1227, 1236
Ama87I	CYCGRG	1 cut(s)	464
AoxI	GGCC	5 cut(s)	258, 311, 1151, 1481, 2061
ApeKI	GCWGC	2 cut(s)	46, 614
ApoI	RAATTY	5 cut(s)	1061, 1456, 1744, 1854, 1916
Asp700I	GAANNNNTTC	1 cut(s)	285
AspLEI	GCGC	2 cut(s)	503, 1823
AspS9I	GGNCC	5 cut(s)	312, 1151, 1256, 1528, 1807
AsuC2I	CCSGG	1 cut(s)	335
AsuHPI	GGTGA	8 cut(s)	433, 650, 737, 784, 1020, 1388, 1567, 2212
AsuII	TTCGAA	1 cut(s)	279
AsuNHI	GCTAGC	4 cut(s)	1036, 1321, 1339, 1433
AvaI	CYCGRG	1 cut(s)	464
AvaII	GGWCC	3 cut(s)	1256, 1528, 1807
AxyI	CCTNAGG	1 cut(s)	1734
BanI	GGYRCC	2 cut(s)	1364, 1680
BanII	GRGCYC	1 cut(s)	267
BbsI	GAAGAC	1 cut(s)	2122
Bbv12I	GWGCWC	1 cut(s)	267
BbvCI	CCTCAGC	2 cut(s)	1698, 2014
BbvI	GCAGC	2 cut(s)	33, 626
BciT130I	CCWGG	2 cut(s)	215, 296
BciVI	GTATCC	1 cut(s)	925
BcnI	CCSGG	1 cut(s)	335
BcoDI	GTCTC	5 cut(s)	322, 597, 850, 1322, 1786
BfaI	CTAG	6 cut(s)	789, 1037, 1322, 1340, 1434, 1709
BfmI	CTRYAG	3 cut(s)	759, 1404, 2235
BfoI	RGCGCY	1 cut(s)	504
BfuAI	ACCTGC	1 cut(s)	579
BfuI	GTATCC	1 cut(s)	925
BisI	GCNGC	3 cut(s)	47, 258, 615
BlsI	GCNGC	3 cut(s)	48, 259, 616
Bme1390I	CCNGG	3 cut(s)	215, 296, 335
Bme18I	GGWCC	3 cut(s)	1256, 1528, 1807
BmeT110I	CYCGRG	1 cut(s)	464
BmgBI	CACGTC	1 cut(s)	376
BmgT120I	GGNCC	5 cut(s)	312, 1151, 1256, 1528, 1807
BmiI	GGNNCC	3 cut(s)	408, 1366, 1682
BmrFI	CCNGG	3 cut(s)	215, 296, 335
BmrI	ACTGGG	1 cut(s)	741
BmsI	GCATC	5 cut(s)	115, 484, 1832, 1891, 2048
BmtI	GCTAGC	4 cut(s)	1040, 1325, 1343, 1437
BmuI	ACTGGG	1 cut(s)	741
BoxI	GACNNNNGTC	1 cut(s)	2199
BpiI	GAAGAC	1 cut(s)	2122
BpmI	CTGGAG	2 cut(s)	425, 909
Bpu10I	CCTNAGC	2 cut(s)	1698, 2014
Bpu14I	TTCGAA	1 cut(s)	279
BpuEI	CTTGAG	2 cut(s)	1945, 1961
BpuMI	CCSGG	1 cut(s)	335
Bsa29I	ATCGAT	1 cut(s)	1109
BsaAI	YACGTR	1 cut(s)	478
BsaBI	GATNNNNATC	1 cut(s)	399
BsaI	GGTCTC	2 cut(s)	597, 1322
BsaJI	CCNNGG	5 cut(s)	294, 414, 444, 1478, 1531
BsaWI	WCCGGW	1 cut(s)	917
BsaXI	ACNNNNNCTCC	4 cut(s)	2048, 2078, 2102, 2132
Bsc4I	CCNNNNNNNGG	4 cut(s)	16, 282, 1216, 2074
Bse118I	RCCGGY	1 cut(s)	497
Bse1I	ACTGG	4 cut(s)	736, 1174, 1663, 1822
Bse21I	CCTNAGG	1 cut(s)	1734
Bse3DI	GCAATG	4 cut(s)	979, 1005, 1441, 2079
Bse8I	GATNNNNATC	1 cut(s)	399
BseBI	CCWGG	2 cut(s)	215, 296
BseCI	ATCGAT	1 cut(s)	1109
BseDI	CCNNGG	5 cut(s)	294, 414, 444, 1478, 1531
BseGI	GGATG	4 cut(s)	628, 1144, 1277, 1866
BseJI	GATNNNNATC	1 cut(s)	399
BseLI	CCNNNNNNNGG	4 cut(s)	16, 282, 1216, 2074
BseMI	GCAATG	4 cut(s)	979, 1005, 1441, 2079
BseMII	CTCAG	7 cut(s)	624, 1070, 1317, 1499, 1712, 1725, 2028
BseNI	ACTGG	4 cut(s)	736, 1174, 1663, 1822
BseRI	GAGGAG	2 cut(s)	257, 824
BseX3I	CGGCCG	1 cut(s)	258
BseXI	GCAGC	2 cut(s)	33, 626
BsgI	GTGCAG	1 cut(s)	607
Bsh1236I	CGCG	2 cut(s)	852, 1400
Bsh1285I	CGRYCG	1 cut(s)	261
BshFI	GGCC	5 cut(s)	260, 313, 1153, 1483, 2063
BshNI	GGYRCC	2 cut(s)	1364, 1680
BshVI	ATCGAT	1 cut(s)	1109
BsiEI	CGRYCG	1 cut(s)	261
BsiHKAI	GWGCWC	1 cut(s)	267
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	4 cut(s)	335, 347, 498, 918
BslFI	GGGAC	1 cut(s)	1549
BslI	CCNNNNNNNGG	4 cut(s)	16, 282, 1216, 2074
BsmAI	GTCTC	5 cut(s)	322, 597, 850, 1322, 1786
BsmBI	CGTCTC	1 cut(s)	322
BsmFI	GGGAC	1 cut(s)	1549
BsmI	GAATGC	3 cut(s)	1873, 2184, 2205
BsnI	GGCC	5 cut(s)	260, 313, 1153, 1483, 2063
Bso31I	GGTCTC	2 cut(s)	597, 1322
BsoBI	CYCGRG	1 cut(s)	464
Bsp119I	TTCGAA	1 cut(s)	279
Bsp1286I	GDGCHC	1 cut(s)	267
Bsp19I	CCATGG	1 cut(s)	444
Bsp68I	TCGCGA	1 cut(s)	852
BspACI	CCGC	8 cut(s)	257, 390, 419, 550, 1164, 1553, 1991, 2147
BspANI	GGCC	5 cut(s)	260, 313, 1153, 1483, 2063
BspCNI	CTCAG	7 cut(s)	623, 1069, 1318, 1498, 1711, 1726, 2027
BspDI	ATCGAT	1 cut(s)	1109
BspFNI	CGCG	2 cut(s)	852, 1400
BspLI	GGNNCC	3 cut(s)	408, 1366, 1682
BspMAI	CTGCAG	1 cut(s)	763
BspMI	ACCTGC	1 cut(s)	579
BspOI	GCTAGC	4 cut(s)	1040, 1325, 1343, 1437
BspPI	GGATC	6 cut(s)	90, 389, 971, 1010, 1227, 1236
BspT104I	TTCGAA	1 cut(s)	279
BspT107I	GGYRCC	2 cut(s)	1364, 1680
BspTNI	GGTCTC	2 cut(s)	597, 1322
BsrDI	GCAATG	4 cut(s)	979, 1005, 1441, 2079
BsrFI	RCCGGY	1 cut(s)	497
BsrI	ACTGG	4 cut(s)	736, 1174, 1663, 1822
BssAI	RCCGGY	1 cut(s)	497
BssECI	CCNNGG	5 cut(s)	294, 414, 444, 1478, 1531
BssT1I	CCWWGG	3 cut(s)	444, 1478, 1531
Bst2UI	CCWGG	2 cut(s)	215, 296
Bst4CI	ACNGT	5 cut(s)	328, 415, 433, 959, 1097
Bst6I	CTCTTC	1 cut(s)	1374
BstBAI	YACGTR	1 cut(s)	478
BstBI	TTCGAA	1 cut(s)	279
BstC8I	GCNNGC	8 cut(s)	499, 996, 1038, 1155, 1323, 1341, 1435, 1439
BstDEI	CTNAG	8 cut(s)	610, 1056, 1241, 1326, 1485, 1698, 1734, 2014
BstDSI	CCRYGG	2 cut(s)	414, 444
BstENI	CCTNNNNNAGG	2 cut(s)	14, 1214
BstF5I	GGATG	4 cut(s)	628, 1144, 1277, 1866
BstFNI	CGCG	2 cut(s)	852, 1400
BstH2I	RGCGCY	1 cut(s)	504
BstHHI	GCGC	2 cut(s)	503, 1823
BstMAI	GTCTC	5 cut(s)	322, 597, 850, 1322, 1786
BstMCI	CGRYCG	1 cut(s)	261
BstMWI	GCNNNNNNNGC	7 cut(s)	995, 1170, 1322, 1406, 1443, 1559, 1978
BstNI	CCWGG	2 cut(s)	215, 296
BstNSI	RCATGY	2 cut(s)	127, 829
BstPAI	GACNNNNGTC	1 cut(s)	2199
BstSCI	CCNGG	3 cut(s)	213, 294, 333
BstSFI	CTRYAG	3 cut(s)	759, 1404, 2235
BstUI	CGCG	2 cut(s)	852, 1400
BstV1I	GCAGC	2 cut(s)	33, 626
BstV2I	GAAGAC	1 cut(s)	2122
BstX2I	RGATCY	1 cut(s)	1228
BstYI	RGATCY	1 cut(s)	1228
BstZI	CGGCCG	1 cut(s)	258
Bsu15I	ATCGAT	1 cut(s)	1109
Bsu36I	CCTNAGG	1 cut(s)	1734
BsuI	GTATCC	1 cut(s)	925
BsuRI	GGCC	5 cut(s)	260, 313, 1153, 1483, 2063
BsuTUI	ATCGAT	1 cut(s)	1109
BtgI	CCRYGG	2 cut(s)	414, 444
BtrI	CACGTC	1 cut(s)	376
BtsCI	GGATG	4 cut(s)	628, 1144, 1277, 1866
BtsIMutI	CAGTG	3 cut(s)	429, 729, 1467
BtuMI	TCGCGA	1 cut(s)	852
BveI	ACCTGC	1 cut(s)	579
Cac8I	GCNNGC	8 cut(s)	499, 996, 1038, 1155, 1323, 1341, 1435, 1439
CfoI	GCGC	2 cut(s)	503, 1823
Cfr10I	RCCGGY	1 cut(s)	497
Cfr13I	GGNCC	5 cut(s)	312, 1151, 1256, 1528, 1807
ClaI	ATCGAT	1 cut(s)	1109
CseI	GACGC	1 cut(s)	1389
Csp6I	GTAC	5 cut(s)	653, 1167, 1350, 1729, 1893
CviQI	GTAC	5 cut(s)	653, 1167, 1350, 1729, 1893
DdeI	CTNAG	8 cut(s)	610, 1056, 1241, 1326, 1485, 1698, 1734, 2014
DraI	TTTAAA	1 cut(s)	1515
DrdI	GACNNNNNNGTC	1 cut(s)	1526
DseDI	GACNNNNNNGTC	1 cut(s)	1526
EaeI	YGGCCR	1 cut(s)	258
EagI	CGGCCG	1 cut(s)	258
Eam1104I	CTCTTC	1 cut(s)	1374
EarI	CTCTTC	1 cut(s)	1374
Ecl136II	GAGCTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	258
Eco130I	CCWWGG	3 cut(s)	444, 1478, 1531
Eco147I	AGGCCT	1 cut(s)	1483
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	597, 1322
Eco47I	GGWCC	3 cut(s)	1256, 1528, 1807
Eco52I	CGGCCG	1 cut(s)	258
Eco53kI	GAGCTC	1 cut(s)	265
Eco81I	CCTNAGG	1 cut(s)	1734
Eco88I	CYCGRG	1 cut(s)	464
EcoICRI	GAGCTC	1 cut(s)	265
EcoNI	CCTNNNNNAGG	2 cut(s)	14, 1214
EcoO109I	RGGNCCY	1 cut(s)	1807
EcoRI	GAATTC	1 cut(s)	1456
EcoRII	CCWGG	2 cut(s)	213, 294
EcoT14I	CCWWGG	3 cut(s)	444, 1478, 1531
EcoT22I	ATGCAT	1 cut(s)	802
EcoT38I	GRGCYC	1 cut(s)	267
ErhI	CCWWGG	3 cut(s)	444, 1478, 1531
Esp3I	CGTCTC	1 cut(s)	322
FaqI	GGGAC	1 cut(s)	1549
FauI	CCCGC	1 cut(s)	1984
FblI	GTMKAC	2 cut(s)	36, 1842
Fnu4HI	GCNGC	3 cut(s)	47, 258, 615
FokI	GGATG	4 cut(s)	635, 1151, 1264, 1873
FriOI	GRGCYC	1 cut(s)	267
Fsp4HI	GCNGC	3 cut(s)	47, 258, 615
FspBI	CTAG	6 cut(s)	789, 1037, 1322, 1340, 1434, 1709
GlaI	GCGC	2 cut(s)	502, 1822
GluI	GCNGC	3 cut(s)	47, 258, 615
GsuI	CTGGAG	2 cut(s)	425, 909
HaeII	RGCGCY	1 cut(s)	504
HaeIII	GGCC	5 cut(s)	260, 313, 1153, 1483, 2063
HapII	CCGG	4 cut(s)	335, 347, 498, 918
HgaI	GACGC	1 cut(s)	1389
HhaI	GCGC	2 cut(s)	503, 1823
Hin6I	GCGC	2 cut(s)	501, 1821
HinP1I	GCGC	2 cut(s)	501, 1821
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HindIII	AAGCTT	1 cut(s)	470
HinfI	GANTC	2 cut(s)	511, 556
HpaII	CCGG	4 cut(s)	335, 347, 498, 918
HphI	GGTGA	8 cut(s)	433, 650, 737, 784, 1020, 1388, 1567, 2212
Hpy166II	GTNNAC	3 cut(s)	37, 121, 1843
Hpy188I	TCNGA	4 cut(s)	87, 490, 516, 1059
Hpy8I	GTNNAC	3 cut(s)	37, 121, 1843
Hpy99I	CGWCG	2 cut(s)	173, 377
HpyAV	CCTTC	5 cut(s)	286, 873, 949, 1628, 2168
HpyCH4III	ACNGT	5 cut(s)	328, 415, 433, 959, 1097
HpyCH4IV	ACGT	7 cut(s)	149, 375, 477, 539, 1427, 1624, 1965
HpyF10VI	GCNNNNNNNGC	7 cut(s)	995, 1170, 1322, 1406, 1443, 1559, 1978
HpyF3I	CTNAG	8 cut(s)	610, 1056, 1241, 1326, 1485, 1698, 1734, 2014
HpySE526I	ACGT	7 cut(s)	149, 375, 477, 539, 1427, 1624, 1965
HspAI	GCGC	2 cut(s)	501, 1821
KroI	GCCGGC	1 cut(s)	497
KroNI	GCCGGC	1 cut(s)	499
LmnI	GCTCC	5 cut(s)	12, 270, 406, 735, 890
Lsp1109I	GCAGC	2 cut(s)	33, 626
LweI	GCATC	5 cut(s)	115, 484, 1832, 1891, 2048
MaeI	CTAG	6 cut(s)	789, 1037, 1322, 1340, 1434, 1709
MaeII	ACGT	7 cut(s)	149, 375, 477, 539, 1427, 1624, 1965
MaeIII	GTNAC	6 cut(s)	508, 725, 959, 1827, 1873, 1982
MflI	RGATCY	1 cut(s)	1228
MhlI	GDGCHC	1 cut(s)	267
MluI	ACGCGT	1 cut(s)	1398
MlyI	GAGTC	1 cut(s)	505
MmeI	TCCRAC	2 cut(s)	1433, 2088
Mph1103I	ATGCAT	1 cut(s)	802
MroNI	GCCGGC	1 cut(s)	497
MroXI	GAANNNNTTC	1 cut(s)	285
MseI	TTAA	5 cut(s)	582, 693, 1116, 1514, 2186
MslI	CAYNNNNRTG	3 cut(s)	304, 1678, 1887
MspA1I	CMGCKG	2 cut(s)	392, 1553
MspI	CCGG	4 cut(s)	335, 347, 498, 918
MspR9I	CCNGG	3 cut(s)	215, 296, 335
Mva1269I	GAATGC	3 cut(s)	1873, 2184, 2205
MvaI	CCWGG	2 cut(s)	215, 296
MvnI	CGCG	2 cut(s)	852, 1400
MwoI	GCNNNNNNNGC	7 cut(s)	995, 1170, 1322, 1406, 1443, 1559, 1978
NaeI	GCCGGC	1 cut(s)	499
NciI	CCSGG	1 cut(s)	335
NcoI	CCATGG	1 cut(s)	444
NgoMIV	GCCGGC	1 cut(s)	497
NheI	GCTAGC	4 cut(s)	1036, 1321, 1339, 1433
NlaIV	GGNNCC	3 cut(s)	408, 1366, 1682
NmeAIII	GCCGAG	2 cut(s)	286, 970
NmuCI	GTSAC	3 cut(s)	508, 725, 959
NruI	TCGCGA	1 cut(s)	852
NsiI	ATGCAT	1 cut(s)	802
NspI	RCATGY	2 cut(s)	127, 829
NspV	TTCGAA	1 cut(s)	279
OliI	CACNNNNGTG	1 cut(s)	1678
PceI	AGGCCT	1 cut(s)	1483
PctI	GAATGC	3 cut(s)	1873, 2184, 2205
PdiI	GCCGGC	1 cut(s)	499
PdmI	GAANNNNTTC	1 cut(s)	285
PfeI	GAWTC	1 cut(s)	556
PfoI	TCCNGGA	2 cut(s)	213, 333
PkrI	GCNGC	3 cut(s)	48, 259, 616
PleI	GAGTC	1 cut(s)	505
PpsI	GAGTC	1 cut(s)	505
Ppu21I	YACGTR	1 cut(s)	478
PpuMI	RGGWCCY	1 cut(s)	1807
PshAI	GACNNNNGTC	1 cut(s)	2199
PsiI	TTATAA	2 cut(s)	15, 1910
Psp124BI	GAGCTC	1 cut(s)	267
Psp5II	RGGWCCY	1 cut(s)	1807
Psp6I	CCWGG	2 cut(s)	213, 294
PspGI	CCWGG	2 cut(s)	213, 294
PspN4I	GGNNCC	3 cut(s)	408, 1366, 1682
PspPI	GGNCC	5 cut(s)	312, 1151, 1256, 1528, 1807
PspPPI	RGGWCCY	1 cut(s)	1807
PstI	CTGCAG	1 cut(s)	763
PsuI	RGATCY	1 cut(s)	1228
RruI	TCGCGA	1 cut(s)	852
RsaI	GTAC	5 cut(s)	654, 1168, 1351, 1730, 1894
RsaNI	GTAC	5 cut(s)	653, 1167, 1350, 1729, 1893
RseI	CAYNNNNRTG	3 cut(s)	304, 1678, 1887
SacI	GAGCTC	1 cut(s)	267
SaqAI	TTAA	5 cut(s)	582, 693, 1116, 1514, 2186
SatI	GCNGC	3 cut(s)	47, 258, 615
Sau96I	GGNCC	5 cut(s)	312, 1151, 1256, 1528, 1807
SchI	GAGTC	1 cut(s)	505
ScrFI	CCNGG	3 cut(s)	215, 296, 335
SduI	GDGCHC	1 cut(s)	267
SfaNI	GCATC	5 cut(s)	115, 484, 1832, 1891, 2048
SfcI	CTRYAG	3 cut(s)	759, 1404, 2235
SfuI	TTCGAA	1 cut(s)	279
SinI	GGWCC	3 cut(s)	1256, 1528, 1807
SmiI	ATTTAAAT	1 cut(s)	1515
SmiMI	CAYNNNNRTG	3 cut(s)	304, 1678, 1887
SmlI	CTYRAG	2 cut(s)	1924, 1976
SmoI	CTYRAG	2 cut(s)	1924, 1976
SseBI	AGGCCT	1 cut(s)	1483
SsiI	CCGC	8 cut(s)	257, 390, 419, 550, 1164, 1553, 1991, 2147
SspMI	CTAG	6 cut(s)	789, 1037, 1322, 1340, 1434, 1709
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	1 cut(s)	1483
StyD4I	CCNGG	3 cut(s)	213, 294, 333
StyI	CCWWGG	3 cut(s)	444, 1478, 1531
SwaI	ATTTAAAT	1 cut(s)	1515
TaaI	ACNGT	5 cut(s)	328, 415, 433, 959, 1097
TaiI	ACGT	7 cut(s)	152, 378, 480, 542, 1430, 1627, 1968
TaqI	TCGA	7 cut(s)	145, 196, 279, 372, 453, 1109, 1790
TauI	GCSGC	1 cut(s)	260
TfiI	GAWTC	1 cut(s)	556
Tru1I	TTAA	5 cut(s)	582, 693, 1116, 1514, 2186
Tru9I	TTAA	5 cut(s)	582, 693, 1116, 1514, 2186
TscAI	CASTG	3 cut(s)	436, 736, 1467
TseFI	GTSAC	3 cut(s)	508, 725, 959
TseI	GCWGC	2 cut(s)	46, 614
Tsp45I	GTSAC	3 cut(s)	508, 725, 959
TspGWI	ACGGA	1 cut(s)	157
TspRI	CASTG	3 cut(s)	436, 736, 1467
VpaK11BI	GGWCC	3 cut(s)	1256, 1528, 1807
XagI	CCTNNNNNAGG	2 cut(s)	14, 1214
XapI	RAATTY	5 cut(s)	1061, 1456, 1744, 1854, 1916
XceI	RCATGY	2 cut(s)	127, 829
XmiI	GTMKAC	2 cut(s)	36, 1842
XmnI	GAANNNNTTC	1 cut(s)	285
XspI	CTAG	6 cut(s)	789, 1037, 1322, 1340, 1434, 1709
Zsp2I	ATGCAT	1 cut(s)	802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.